Citrus Sinensis ID: 005949
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 668 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM5 | 669 | Probable rhamnose biosynt | yes | no | 1.0 | 0.998 | 0.886 | 0.0 | |
| Q9LH76 | 664 | Probable rhamnose biosynt | no | no | 0.994 | 1.0 | 0.857 | 0.0 | |
| Q9LPG6 | 667 | Probable rhamnose biosynt | no | no | 0.994 | 0.995 | 0.856 | 0.0 | |
| Q8VDR7 | 355 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.489 | 0.921 | 0.482 | 8e-89 | |
| O95455 | 350 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.489 | 0.934 | 0.470 | 6e-86 | |
| A6QLW2 | 355 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.489 | 0.921 | 0.467 | 1e-85 | |
| Q54WS6 | 434 | dTDP-D-glucose 4,6-dehydr | yes | no | 0.474 | 0.730 | 0.462 | 1e-84 | |
| Q5UR12 | 323 | Putative dTDP-D-glucose 4 | N/A | no | 0.465 | 0.962 | 0.451 | 4e-75 | |
| P27830 | 355 | dTDP-glucose 4,6-dehydrat | N/A | no | 0.479 | 0.901 | 0.405 | 1e-64 | |
| P55294 | 355 | dTDP-glucose 4,6-dehydrat | yes | no | 0.476 | 0.895 | 0.411 | 1e-64 |
| >sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/669 (88%), Positives = 633/669 (94%), Gaps = 1/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MA+YTPKNILITGAAGFIASHV NRLIR+YP+YKIVVLDKLDYCSNLKNL PSK S NFK
Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRV DVAKDICKLF+MDPE +IKFV+NRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT WEEGL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGRHFDGSE+N +++
Sbjct: 301 GWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL 360
Query: 361 STNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S Q+ MVVP + + +P+KPS+KFLIYG+TGWIGGLLGK+C+K+GI +EYGKGRLED
Sbjct: 361 SEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLED 420
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+ D+QSVKPTHVFN+AGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCR+HG+LM
Sbjct: 421 RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLM 480
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYD HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 481 MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVS
Sbjct: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVS 600
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMY+ YINPEFKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 601 HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 660
Query: 660 YVFEPNKKT 668
Y + PNKKT
Sbjct: 661 YAYGPNKKT 669
|
Probably involved in the synthesis of pectinaceous rhamnogalacturonan I. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/668 (85%), Positives = 617/668 (92%), Gaps = 4/668 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MATY PKNILITGAAGFIASHV NRL+R+YP+YKIVVLDKLDYCSNLKNL PSK+S NFK
Sbjct: 1 MATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN+LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM G PLPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEV HVYN+GT +ERRVIDVA DI KLF +DP+++I++VENRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GW ERT WEEGLRKT+EWYT+NP+WWGDVSGALLPHPRMLMMPG RH DGS+E+K
Sbjct: 301 GWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGN 360
Query: 361 STNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC 420
T + V P S K S+KFLIYG+TGW+GGLLGKLCEK+GIP+EYGKGRLED
Sbjct: 361 QTFTV----VTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDR 416
Query: 421 SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMM 480
+SLIAD++S+KP+HVFNAAG+TGRPNVDWCESHKT+TIR NVAGTLTLADVCR++ +LMM
Sbjct: 417 ASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMM 476
Query: 481 NYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 540
N+ATGCIFEYDAAHPEGSGIG+KEED PNFTGSFYSKTKAMVEELL+E+DNVCTLRVRMP
Sbjct: 477 NFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMP 536
Query: 541 ISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH 600
ISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPGVVSH
Sbjct: 537 ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSH 596
Query: 601 NEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKY 660
NEILEMYK YI P+FKW NF LEEQAKVIVAPRSNNEMD +KL KEFPE+LSIKDSLIKY
Sbjct: 597 NEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKY 656
Query: 661 VFEPNKKT 668
VFEPNK+T
Sbjct: 657 VFEPNKRT 664
|
Probably involved in the synthesis of pectinaceous rhamnogalacturonan I. Arabidopsis thaliana (taxid: 3702) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LPG6|RHM2_ARATH Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/667 (85%), Positives = 615/667 (92%), Gaps = 3/667 (0%)
Query: 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF 61
TY PKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCS+LKNL PS +S NFKF
Sbjct: 4 TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKF 63
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
VKGDIAS DLVN+LLITE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT
Sbjct: 64 VKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 123
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
GQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV
Sbjct: 124 GQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 183
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
ITTRGNNVYGPNQFPEK+IPKFILLAM G PLPIHGDGSNVRSYLYCEDVAEAFE +LHK
Sbjct: 184 ITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 243
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLG 301
GE+GHVYNVGTK+ERRVIDVA+DICKLF DPE+SI+FVENRPFNDQRYFLDDQKL LG
Sbjct: 244 GEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLG 303
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVS 361
W ERT WE+GL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGR DGS E K VSS
Sbjct: 304 WQERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSS-- 361
Query: 362 TNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS 421
N +Q+ VV S K S+KFLIYG+TGW+GGLLGKLCEK+GI +EYGKGRLED +
Sbjct: 362 -NTVQTFTVVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRA 420
Query: 422 SLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMN 481
SL+AD++S+KPTHVFNAAG+TGRPNVDWCESHK +TIR NVAGTLTLADVCR++ +LMMN
Sbjct: 421 SLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMN 480
Query: 482 YATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 541
+ATGCIFEYDA HPEGSGIG+KEED PNF GSFYSKTKAMVEELL+E+DNVCTLRVRMPI
Sbjct: 481 FATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPI 540
Query: 542 SSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHN 601
SSDLNNPRNFITKISRYNKVV+IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHN
Sbjct: 541 SSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHN 600
Query: 602 EILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYV 661
EILEMYK YI P FKW NFT+EEQAKVIVA RSNNEMD SKL KEFPE+LSIK+SL+KYV
Sbjct: 601 EILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYV 660
Query: 662 FEPNKKT 668
FEPNK+T
Sbjct: 661 FEPNKRT 667
|
Involved in the synthesis of pectinaceous rhamnogalacturonan I, the major component of Arabidopsis mucilage. Required for the normal seed coat epidermal development. Arabidopsis thaliana (taxid: 3702) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: - |
| >sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2 | Back alignment and function description |
|---|
Score = 328 bits (841), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/336 (48%), Positives = 217/336 (64%), Gaps = 9/336 (2%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G + +
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEK 136
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF---DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRS 193
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KGE G
Sbjct: 194 SNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE 253
Query: 247 VYNVGTKKERRVIDVAKDICKLF-----SMDPETSIKFVENRPFNDQRYFLDDQKLTSLG 301
+YN+GT E V+ +AK++ +L + E+ + +V +RP ND RY + +K+ SLG
Sbjct: 254 IYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSLG 313
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
W + WEEG++KT+EWY +N W + AL P P
Sbjct: 314 WKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
|
Mus musculus (taxid: 10090) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 318 bits (816), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 215/336 (63%), Gaps = 9/336 (2%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 194 SNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE 253
Query: 247 VYNVGTKKERRVIDVAKDICKLF-----SMDPETSIKFVENRPFNDQRYFLDDQKLTSLG 301
+YN+GT E V+ +AK++ +L + E + +V +RP ND RY + +K+ LG
Sbjct: 254 IYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLG 313
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
W + W+EG++KTIEWY +N W +V AL P P
Sbjct: 314 WRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
|
Homo sapiens (taxid: 9606) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/336 (46%), Positives = 215/336 (63%), Gaps = 9/336 (2%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF---DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 194 SNVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGE 253
Query: 247 VYNVGTKKERRVIDVAKDICKLF-----SMDPETSIKFVENRPFNDQRYFLDDQKLTSLG 301
+YN+GT E V+ +AK++ +L + E + +V++RP ND RY + +K+ LG
Sbjct: 254 IYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGLG 313
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
W + W+EG++KTIEWY +N W + AL P P
Sbjct: 314 WRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
|
Bos taurus (taxid: 9913) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q54WS6|TGDS_DICDI dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1 | Back alignment and function description |
|---|
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/359 (46%), Positives = 219/359 (61%), Gaps = 42/359 (11%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILITG AGFI SH+ L + + KI+VLDKLDYCSN+ NL NFKF KG+I
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNILD 71
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
++L+ + E ID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++++FI
Sbjct: 72 SELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKKFI 130
Query: 129 HVSTDEVYGE--------TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+VSTDEVYG + ++E S L PTNPYSA+KAGAE LV +Y +S+ LP
Sbjct: 131 YVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKLP 190
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VI TR NN+YGP Q+PEK+IPKFI L + IHG G N R+YLY +D+ AF+ IL
Sbjct: 191 VIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDIILR 250
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKL-------------------------------- 268
KGE+G+VYN+GT E +DVAK I +
Sbjct: 251 KGEIGNVYNIGTDFEISNLDVAKKIINISINLNNNNNNNNNNNNNNNNNNNNNNNNNNND 310
Query: 269 FS-MDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNPDWW 326
F+ MD + I ++++RPFND RY ++ KL++LGW + WEEG+ KT WY N ++W
Sbjct: 311 FNIMDYKKFINYIDDRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNYW 369
|
Dictyostelium discoideum (taxid: 44689) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|Q5UR12|TGDS_MIMIV Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R141 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/317 (45%), Positives = 207/317 (65%), Gaps = 6/317 (1%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
KNIL+TG GFI S+ N + Y I V D DYC++++N+ + ++ K +KGDI
Sbjct: 2 KNILVTGGLGFIGSNFVNHISSKYDNVNIYVYDIGDYCASVENV---EWNNRTKLIKGDI 58
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ DL+ L IDTI+HFAA +HVDNSF NS FT+ N++GTHVLLE ++ G+++
Sbjct: 59 RNFDLIMHTLTEHEIDTIVHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRMYGKLKL 118
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F H+STDEVYGE D + E S L PTNPY+ATKAGAE +V +Y SY LP+I R
Sbjct: 119 FFHMSTDEVYGEIDTTDT--SREVSLLCPTNPYAATKAGAEHIVKSYFLSYKLPIIIARC 176
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
NNVYG NQ+PEKLIPKFI + G L I G G++ R++++ DVA+A + +++ G +G
Sbjct: 177 NNVYGRNQYPEKLIPKFICSLLDGKKLHIQGTGNSRRNFIHAIDVADAVDLVINNGVIGE 236
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE-R 305
YN+G E V+DVA+ +C + ++ E +++V +R FND RY + + K+ SLGW + R
Sbjct: 237 TYNIGVTNEHSVLDVAQILCDIAGVNLENQLEYVPDRLFNDFRYNITNDKIKSLGWEQSR 296
Query: 306 TIWEEGLRKTIEWYTQN 322
+++ L + +WY N
Sbjct: 297 KDFKKELVELFDWYKVN 313
|
Acanthamoeba polyphaga (taxid: 5757) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|P27830|RMLB2_ECOLI dTDP-glucose 4,6-dehydratase 2 OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 190/345 (55%), Gaps = 25/345 (7%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ ILITG AGFI S + R I N +VV+DKL Y NL +L P S F F K DI
Sbjct: 2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV------ 120
+ + D +MH AA++HVD S F + NI GT+ LLEA +
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 121 --TGQIRRFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
RF H+STDEVYG+ + +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFT---ETTPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
YGLP + T +N YGP FPEKLIP IL A+ G LP++G+G +R +LY ED A A
Sbjct: 178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALY 237
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLF-SMDPETS---------IKFVENRPFN 286
C+ G+VG YN+G ER+ +DV + IC+L + P I FV +RP +
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGH 297
Query: 287 DQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDVS 330
D RY +D K+ LGW + +E G+RKT++WY N WW V
Sbjct: 298 DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQ 342
|
Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. Escherichia coli (strain K12) (taxid: 83333) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
| >sp|P55294|RMLB_NEIMB dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B (strain MC58) GN=rfbB1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 197/345 (57%), Gaps = 27/345 (7%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ IL+TG AGFI S V +IRN + +V +DKL Y NL++L + + F + DI
Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--- 123
++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 124 -----IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLR 176
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
+YGLP I T +N YGP FPEKLIP IL A+ G PLP++GDG +R +L+ ED A A
Sbjct: 177 TYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARAL 236
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLF-SMDPETS---------IKFVENRPF 285
++ +G VG YN+G E+ I+V K IC L + PE I FV++RP
Sbjct: 237 YQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPG 296
Query: 286 NDQRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWYTQNPDWWGDV 329
+D RY +D K+ LGW +E GLRKT++WY N WW +V
Sbjct: 297 HDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNV 341
|
Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction. Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586) EC: 4 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 668 | ||||||
| 224119002 | 670 | predicted protein [Populus trichocarpa] | 1.0 | 0.997 | 0.9 | 0.0 | |
| 211906526 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.997 | 0.998 | 0.904 | 0.0 | |
| 225461808 | 675 | PREDICTED: probable rhamnose biosyntheti | 1.0 | 0.989 | 0.900 | 0.0 | |
| 283488503 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.997 | 0.998 | 0.899 | 0.0 | |
| 297839725 | 669 | RHM1/ROL1 [Arabidopsis lyrata subsp. lyr | 1.0 | 0.998 | 0.893 | 0.0 | |
| 356549610 | 669 | PREDICTED: probable rhamnose biosyntheti | 0.995 | 0.994 | 0.894 | 0.0 | |
| 356544142 | 669 | PREDICTED: probable rhamnose biosyntheti | 0.995 | 0.994 | 0.894 | 0.0 | |
| 15218420 | 669 | UDP-glucose 4,6-dehydratase [Arabidopsis | 1.0 | 0.998 | 0.886 | 0.0 | |
| 449438897 | 670 | PREDICTED: probable rhamnose biosyntheti | 0.995 | 0.992 | 0.885 | 0.0 | |
| 283488501 | 667 | rhamnose synthase [Gossypium hirsutum] | 0.997 | 0.998 | 0.895 | 0.0 |
| >gi|224119002|ref|XP_002331301.1| predicted protein [Populus trichocarpa] gi|222873884|gb|EEF11015.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/670 (90%), Positives = 637/670 (95%), Gaps = 2/670 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MATYTPKNILITGAAGFIASHVCNRLIRNYP+YKIVVLDKLDYCSNLKNL+PSK+S NFK
Sbjct: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM+G LPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKDLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYNVGTKKERRVIDVAKDIC LFSMDP+ SIKFVENRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNVGTKKERRVIDVAKDICNLFSMDPDKSIKFVENRPFNDQRYFLDDQKLKIL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSE T WEEGLRKTIEWYTQNPDWWGDV+GALLPHPRMLMMPGGRHFDGSEEN+ S V
Sbjct: 301 GWSEHTTWEEGLRKTIEWYTQNPDWWGDVTGALLPHPRMLMMPGGRHFDGSEENRDASYV 360
Query: 361 STNNIQSRMVVPVSKC--SSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE 418
S N+ Q+RMV+PV+K SPRKPS+KFLIYGRTGWIGGLLGKLCEK+GI FEYGKGRLE
Sbjct: 361 SNNSNQARMVIPVTKVGTGSPRKPSLKFLIYGRTGWIGGLLGKLCEKQGISFEYGKGRLE 420
Query: 419 DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478
D SSL++D+Q+++PTHVFNAAGVTGRPNVDWCESHKT+TIRTNVAGTLTLADVCR+H +L
Sbjct: 421 DRSSLLSDIQNIRPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHNLL 480
Query: 479 MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 538
M+N+ATGCIFEYDA HPEGSGIG+ EED PNF GSFYSKTKAMVEELL+EYDNVCTLRVR
Sbjct: 481 MVNFATGCIFEYDAGHPEGSGIGFTEEDKPNFIGSFYSKTKAMVEELLREYDNVCTLRVR 540
Query: 539 MPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVV 598
MPISSDL+NPRNFITKISRYNKVVNIPNSMT+L+ELLPISIEMAKRNLRGIWNFTNPGVV
Sbjct: 541 MPISSDLSNPRNFITKISRYNKVVNIPNSMTILEELLPISIEMAKRNLRGIWNFTNPGVV 600
Query: 599 SHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLI 658
SHNEIL+MYK YI+P F WVNF LEEQAKVIVAPRSNNE+DASKLK EFPELL IK+SLI
Sbjct: 601 SHNEILDMYKNYIDPNFTWVNFNLEEQAKVIVAPRSNNELDASKLKNEFPELLPIKESLI 660
Query: 659 KYVFEPNKKT 668
KYVFEPNK+T
Sbjct: 661 KYVFEPNKRT 670
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906526|gb|ACJ11756.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1271 bits (3289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/669 (90%), Positives = 641/669 (95%), Gaps = 3/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
M++YTPKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCSNLKNL+PSK+S NFK
Sbjct: 1 MSSYTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVN+LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDD+KL +L
Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDEKLKNL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSE+T+WEEGL+KTIEWYTQNP+WWGDVSGALLPHPRMLMMPGGRHFD SEE K S
Sbjct: 301 GWSEQTVWEEGLKKTIEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFD-SEEGKGTSFA 359
Query: 361 STNNIQSRMVVPVSKCSSP-RKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S N Q+RMVVP K SS +KP++KFLIYGRTGWIGGLLG+LCEK+GIPFEYG+GRLED
Sbjct: 360 SGPN-QTRMVVPTFKTSSSTQKPALKFLIYGRTGWIGGLLGQLCEKQGIPFEYGRGRLED 418
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+AD+Q++KPTHVFNAAGVTGRPNVDWCESHKT+TIRTNVAGTLTLADVCR+HG+LM
Sbjct: 419 RSSLMADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGLLM 478
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYDA HPEGSGIGYKEED PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 479 MNFATGCIFEYDAGHPEGSGIGYKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 538
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKI+RYNKVVNIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVS
Sbjct: 539 PISSDLNNPRNFITKIARYNKVVNIPNSMTILDELLPISIEMAKRNLNGIWNFTNPGVVS 598
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMYK YI+P+F+WVNFTLEEQAKVIVAPRSNNEMDASKLK EFP+LL IK+SLIK
Sbjct: 599 HNEILEMYKAYIDPKFQWVNFTLEEQAKVIVAPRSNNEMDASKLKNEFPDLLPIKESLIK 658
Query: 660 YVFEPNKKT 668
YVFEPNK+T
Sbjct: 659 YVFEPNKRT 667
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225461808|ref|XP_002285634.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1269 bits (3283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/672 (90%), Positives = 640/672 (95%), Gaps = 4/672 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MAT+TPKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCSNLKNL+PSK+S NFK
Sbjct: 1 MATHTPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG PLPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+GEVGHVYN+GTKKERRVIDVAKD+C LFSMDPETSIKFVENRPFNDQRYFLDDQKL L
Sbjct: 241 RGEVGHVYNIGTKKERRVIDVAKDVCNLFSMDPETSIKFVENRPFNDQRYFLDDQKLKIL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGG--RHFDGSEENKAVS 358
GWSERT W+EGL+KT+EWY NP+WWGDVSGALLPHPRMLMMPGG RHFDGSE++ + +
Sbjct: 301 GWSERTTWQEGLKKTMEWYINNPNWWGDVSGALLPHPRMLMMPGGIERHFDGSEDSDSTA 360
Query: 359 S-VSTNNIQSRMVVPVSK-CSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416
S VS+N Q+RMVVPV K SSPRKPS+KFL+YGRTGWIGGLLGKLCEK+GIP+EYG+GR
Sbjct: 361 SPVSSNLNQTRMVVPVPKSVSSPRKPSLKFLLYGRTGWIGGLLGKLCEKQGIPYEYGRGR 420
Query: 417 LEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG 476
LED +SL+AD+Q+VKPTHVFNAAGVTGRPNVDWCESHK +TIR NVAGTLTLADVCR+HG
Sbjct: 421 LEDRASLLADIQNVKPTHVFNAAGVTGRPNVDWCESHKPETIRANVAGTLTLADVCREHG 480
Query: 477 ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLR 536
+LMMN+ATGCIFEYDAAHPEGSGIG+KEEDTPNF GSFYSKTKAMVEELLKE+DNVCTLR
Sbjct: 481 LLMMNFATGCIFEYDAAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEELLKEFDNVCTLR 540
Query: 537 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPG 596
VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN RGIWNFTNPG
Sbjct: 541 VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNCRGIWNFTNPG 600
Query: 597 VVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDS 656
VVSHNEILEMYK YI+P FKW NFTLEEQAKVIVA RSNNEMDASKLK EFPELL IKDS
Sbjct: 601 VVSHNEILEMYKSYIDPNFKWANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLPIKDS 660
Query: 657 LIKYVFEPNKKT 668
LIKYVFEPN+K+
Sbjct: 661 LIKYVFEPNQKS 672
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|283488503|gb|ADB24773.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1267 bits (3278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 602/669 (89%), Positives = 642/669 (95%), Gaps = 3/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MATYTPKNILITGAAGFIASHV NRL+RNYP+YKIVVLDKLDYCSNLKNL+PS++S NFK
Sbjct: 1 MATYTPKNILITGAAGFIASHVANRLVRNYPDYKIVVLDKLDYCSNLKNLLPSQSSRNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVN+LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDG+NVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGTNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYNVGTKKERRVIDVAKDICKLFSMD ETSIKFVENRPFNDQRYFLDDQKL +L
Sbjct: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDSETSIKFVENRPFNDQRYFLDDQKLKNL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT+WE+GL+KTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGR FD SEE K S +
Sbjct: 301 GWSERTVWEDGLKKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRQFD-SEEGKDTSYI 359
Query: 361 STNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S+ + Q++MVVP SK S S +KP++KFLIYGRTGWIGGLLG+LC+K+GIPFEYGKGRLED
Sbjct: 360 SSPS-QTQMVVPTSKSSVSSQKPALKFLIYGRTGWIGGLLGQLCDKQGIPFEYGKGRLED 418
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL AD++++KPTHVFNAAGVTGRPNVDWCESHKT+TIRTNVAGTLTLADVCR+HG+LM
Sbjct: 419 RSSLTADIRNIKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCREHGLLM 478
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYDA HP+GSGIG+KEED PNFTGSFYSKTKAMVEELLKEY+NVCTLRVRM
Sbjct: 479 MNFATGCIFEYDAGHPQGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYNNVCTLRVRM 538
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRY+KVVNIPNSMT+LDELLPISIEMAKRNL GIWNFTNPGVVS
Sbjct: 539 PISSDLNNPRNFITKISRYSKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVS 598
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMYKKYI+P+F+W NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELL IK+SLIK
Sbjct: 599 HNEILEMYKKYIDPKFQWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLPIKESLIK 658
Query: 660 YVFEPNKKT 668
YVFEPNK+T
Sbjct: 659 YVFEPNKRT 667
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839725|ref|XP_002887744.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] gi|297333585|gb|EFH64003.1| RHM1/ROL1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1264 bits (3271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/669 (89%), Positives = 632/669 (94%), Gaps = 1/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MA+YTPKNILITGAAGFIASHV NRLIR+YP Y IVVLDKLDYCSNLKNL PSK S NFK
Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPHYNIVVLDKLDYCSNLKNLNPSKQSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRV DVA+DICKLFSMDPE +IKFVENRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVARDICKLFSMDPEANIKFVENRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT WEEGL+KT+EWYTQNP+WWGDVSGALLPHPRMLMMPGGRHFDGSE+N +++
Sbjct: 301 GWSERTTWEEGLKKTMEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL 360
Query: 361 STNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S Q+ MVVP + S +P+KPS+KFLIYG+TGWIGGLLGK+CEK+GI +EYGKGRLED
Sbjct: 361 SEKPSQTHMVVPSPRSSGTPQKPSLKFLIYGKTGWIGGLLGKICEKQGIAYEYGKGRLED 420
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+ D+QSVKPTHVFN+AGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCR+HG+LM
Sbjct: 421 RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLM 480
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYD HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 481 MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPIS+EMAKRNL+GIWNFTNPGVVS
Sbjct: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISVEMAKRNLKGIWNFTNPGVVS 600
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMY+ YINPEFKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 601 HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 660
Query: 660 YVFEPNKKT 668
Y FEPNKKT
Sbjct: 661 YAFEPNKKT 669
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549610|ref|XP_003543185.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1259 bits (3258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/671 (89%), Positives = 636/671 (94%), Gaps = 6/671 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MAT+TPKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCSNLKNLIPSK+S NFK
Sbjct: 1 MATHTPKNILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLIPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVN+LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQI+RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM+G PLPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFELILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRVIDVAKD+C+LF MDPETSIKFVENRPFNDQRYFLDD+KL L
Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDMCRLFKMDPETSIKFVENRPFNDQRYFLDDEKLKIL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGG--RHFDGSEENKAVS 358
GWSERT WEEGL+KT++WY NPDWWGDVSGALLPHPRMLMMPGG RHFDGS+E K S
Sbjct: 301 GWSERTTWEEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGGLERHFDGSDEEKPAS 360
Query: 359 SVSTNNIQSRMVVPVSK-CSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL 417
VSTN +RMVVP SK +S +KP++KFLIYGRTGWIGGLLGKLCEK+GIP+EYGKGRL
Sbjct: 361 YVSTN---TRMVVPTSKNVNSSQKPALKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRL 417
Query: 418 EDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477
ED SSL+AD+Q+VKPTH+FNAAGVTGRPNVDWCESHKT+TIRTNVAGTLTLADV R+HG+
Sbjct: 418 EDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVSREHGL 477
Query: 478 LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 537
LM+NYATGCIFEYDAAHPEGSGIG+KEED PNF GSFYSKTKAMVEELLKEYDNVCTLRV
Sbjct: 478 LMINYATGCIFEYDAAHPEGSGIGFKEEDRPNFFGSFYSKTKAMVEELLKEYDNVCTLRV 537
Query: 538 RMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGV 597
RMPISSDL+NPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPG
Sbjct: 538 RMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGA 597
Query: 598 VSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSL 657
VSHNEILEMY+ YI+P FKW NF LEEQAKVI+A RSNNEMDASKLK EFPELLSIK+SL
Sbjct: 598 VSHNEILEMYRDYIDPSFKWANFNLEEQAKVIIAARSNNEMDASKLKNEFPELLSIKESL 657
Query: 658 IKYVFEPNKKT 668
IKYVFEPNKKT
Sbjct: 658 IKYVFEPNKKT 668
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544142|ref|XP_003540514.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/671 (89%), Positives = 635/671 (94%), Gaps = 6/671 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MAT+TPKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCSNLKNLIPSK+S NFK
Sbjct: 1 MATHTPKNILITGAAGFIASHVANRLIRNYPQYKIVVLDKLDYCSNLKNLIPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVN+LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQI+RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIKRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM+G PLPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRVIDVAKDIC+LF MDPETSIKFVENRPFNDQRYFLDD+KL L
Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDICRLFKMDPETSIKFVENRPFNDQRYFLDDEKLKIL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGG--RHFDGSEENKAVS 358
GWSERT WEEGL+KT++WY NPDWWGDVSGALLPHPRMLMMPGG RHFDGS+E K S
Sbjct: 301 GWSERTTWEEGLKKTMDWYINNPDWWGDVSGALLPHPRMLMMPGGLERHFDGSDEEKPPS 360
Query: 359 SVSTNNIQSRMVVPVSK-CSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL 417
VSTN +RMVVP SK +S +KP++KFL+YGRTGWIGGLLGKLCEK+ IP+EYGKGRL
Sbjct: 361 YVSTN---TRMVVPTSKNVNSSQKPALKFLLYGRTGWIGGLLGKLCEKQEIPYEYGKGRL 417
Query: 418 EDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477
ED SSL+AD+Q+VKPTH+FNAAGVTGRPNVDWCESHKT+TIRTNVAGTLTLADV R+HGI
Sbjct: 418 EDRSSLVADIQNVKPTHIFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVSREHGI 477
Query: 478 LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 537
LM+NYATGCIFEYD AHPEGSGIG+KEED PNF GSFYSKTKAMVEELLKEYDNVCTLRV
Sbjct: 478 LMINYATGCIFEYDKAHPEGSGIGFKEEDKPNFIGSFYSKTKAMVEELLKEYDNVCTLRV 537
Query: 538 RMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGV 597
RMPISSDL+NPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPG
Sbjct: 538 RMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGA 597
Query: 598 VSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSL 657
VSHNEILEMY+ YI+P FKW NF LEEQAKVI+APRSNNEMDASKLK EFPELLSIK+SL
Sbjct: 598 VSHNEILEMYRDYIDPSFKWTNFNLEEQAKVIIAPRSNNEMDASKLKNEFPELLSIKESL 657
Query: 658 IKYVFEPNKKT 668
IKYVFEPNKKT
Sbjct: 658 IKYVFEPNKKT 668
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15218420|ref|NP_177978.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|62901057|sp|Q9SYM5.1|RHM1_ARATH RecName: Full=Probable rhamnose biosynthetic enzyme 1 gi|4836876|gb|AAD30579.1|AC007260_10 Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|14596091|gb|AAK68773.1| Similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|20148285|gb|AAM10033.1| similar to dTDP-D-glucose 4,6-dehydratase [Arabidopsis thaliana] gi|332198001|gb|AEE36122.1| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1256 bits (3250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/669 (88%), Positives = 633/669 (94%), Gaps = 1/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MA+YTPKNILITGAAGFIASHV NRLIR+YP+YKIVVLDKLDYCSNLKNL PSK S NFK
Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRV DVAKDICKLF+MDPE +IKFV+NRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT WEEGL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGRHFDGSE+N +++
Sbjct: 301 GWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL 360
Query: 361 STNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S Q+ MVVP + + +P+KPS+KFLIYG+TGWIGGLLGK+C+K+GI +EYGKGRLED
Sbjct: 361 SEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLED 420
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+ D+QSVKPTHVFN+AGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCR+HG+LM
Sbjct: 421 RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLM 480
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYD HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 481 MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVS
Sbjct: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVS 600
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMY+ YINPEFKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 601 HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 660
Query: 660 YVFEPNKKT 668
Y + PNKKT
Sbjct: 661 YAYGPNKKT 669
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438897|ref|XP_004137224.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Cucumis sativus] gi|449483174|ref|XP_004156513.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/671 (88%), Positives = 633/671 (94%), Gaps = 6/671 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MAT+TPKNILITGAAGFIASHV NRL+RNYP YKIVVLDKLDYCSNLKNL+PSK S NFK
Sbjct: 1 MATHTPKNILITGAAGFIASHVANRLVRNYPGYKIVVLDKLDYCSNLKNLLPSKPSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVN+LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG PLPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQPLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRVIDVAKDIC+LFSMD + SIKFVENRPFNDQRYFLDD+KL +L
Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDICRLFSMDADASIKFVENRPFNDQRYFLDDEKLKNL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGG--RHFDGSEENKAVS 358
GWSERT WEEGL+KTIEWYT+NPDWWGDVSGALLPHPRMLMMPGG RHF+GSEE K +
Sbjct: 301 GWSERTTWEEGLKKTIEWYTKNPDWWGDVSGALLPHPRMLMMPGGVERHFEGSEEGKPAA 360
Query: 359 SVSTNNIQSRMVVPVSKC-SSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL 417
S+N ++MVVP S+ +P + S KFLIYGRTGWIGGLLG+LC+K+GI + YGKGRL
Sbjct: 361 YASSN---TKMVVPTSRNPGTPHQSSFKFLIYGRTGWIGGLLGQLCDKQGIAYAYGKGRL 417
Query: 418 EDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477
ED +SL+AD+Q++KPTHVFNAAGVTGRPNVDWCESHKT+TIR NVAGTL+LADVCR+HG+
Sbjct: 418 EDRASLLADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRANVAGTLSLADVCREHGL 477
Query: 478 LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 537
LMMN+ATGCIFEYDA HPEGSGIG+KEED PNF GSFYSKTKAMVEELLKEYDNVCTLRV
Sbjct: 478 LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFIGSFYSKTKAMVEELLKEYDNVCTLRV 537
Query: 538 RMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGV 597
RMPISSDLNNPRNFITKISRY+KVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPGV
Sbjct: 538 RMPISSDLNNPRNFITKISRYSKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGV 597
Query: 598 VSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSL 657
VSHNEILEMYKKYI+PEFKW NFTLEEQAKVIVAPRSNNEMDASKLK EFPE+L IK+SL
Sbjct: 598 VSHNEILEMYKKYIDPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKNEFPEMLGIKESL 657
Query: 658 IKYVFEPNKKT 668
IKYVFEPNKKT
Sbjct: 658 IKYVFEPNKKT 668
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|283488501|gb|ADB24772.1| rhamnose synthase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/669 (89%), Positives = 631/669 (94%), Gaps = 3/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MA+Y PKNILITGAAGFIASHV NRL+RNYPEYKIVVLDKLDYCSN KNL PSK S +FK
Sbjct: 1 MASYKPKNILITGAAGFIASHVANRLVRNYPEYKIVVLDKLDYCSNTKNLFPSKLSPSFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDI SADLVN+LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIESADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE ILH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGKTLPIHGDGSNVRSYLYCEDVAEAFEVILH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVG VYN+GTKKERRVIDVAKDICKLFSMDPETSI+FVENRPFNDQRYFLDDQ+L +L
Sbjct: 241 KGEVGRVYNIGTKKERRVIDVAKDICKLFSMDPETSIEFVENRPFNDQRYFLDDQRLKNL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT+WE+GL+KTIEWYTQNPDWWGDV+GALLPHPRMLMM G HFD SE++K S V
Sbjct: 301 GWSERTVWEDGLKKTIEWYTQNPDWWGDVTGALLPHPRMLMMAGSTHFD-SEDSKETSYV 359
Query: 361 STNNIQSRMVVPVSK-CSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S N Q+RMVVP K SSP+K S+KFLIYGRTGWIGGLLG+LCEK+GI F YGKGRLED
Sbjct: 360 SGPN-QTRMVVPTPKGGSSPQKQSLKFLIYGRTGWIGGLLGQLCEKQGIAFAYGKGRLED 418
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL AD+Q++KPTHVFNAAGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCRDHG+LM
Sbjct: 419 RSSLNADIQNIKPTHVFNAAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCRDHGLLM 478
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYDAAHP+GSGIG+KEED PNF GSFYSKTKAMVEEL KEYDNVCTLRVRM
Sbjct: 479 MNFATGCIFEYDAAHPQGSGIGFKEEDKPNFIGSFYSKTKAMVEELFKEYDNVCTLRVRM 538
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS
Sbjct: 539 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 598
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMYK YI+P+FKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 599 HNEILEMYKTYIDPKFKWENFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 658
Query: 660 YVFEPNKKT 668
Y FEPN++T
Sbjct: 659 YAFEPNRRT 667
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 668 | ||||||
| TAIR|locus:2202960 | 669 | RHM1 "rhamnose biosynthesis 1" | 1.0 | 0.998 | 0.872 | 0.0 | |
| TAIR|locus:2099372 | 664 | RHM3 "rhamnose biosynthesis 3" | 0.994 | 1.0 | 0.841 | 2.10000000002e-313 | |
| TAIR|locus:2024902 | 667 | MUM4 "MUCILAGE-MODIFIED 4" [Ar | 0.992 | 0.994 | 0.840 | 4.6e-311 | |
| TAIR|locus:2015489 | 301 | NRS/ER "nucleotide-rhamnose sy | 0.443 | 0.983 | 0.763 | 1.9e-124 | |
| WB|WBGene00015298 | 631 | C01F1.3 [Caenorhabditis elegan | 0.465 | 0.492 | 0.383 | 2.1e-86 | |
| DICTYBASE|DDB_G0279465 | 434 | tgds "putative dTDP-D-glucose | 0.390 | 0.601 | 0.525 | 1.9e-83 | |
| MGI|MGI:1923605 | 355 | Tgds "TDP-glucose 4,6-dehydrat | 0.488 | 0.918 | 0.486 | 2.4e-83 | |
| RGD|1306544 | 355 | Tgds "TDP-glucose 4,6-dehydrat | 0.488 | 0.918 | 0.480 | 1.7e-82 | |
| UNIPROTKB|F1RP60 | 355 | TGDS "Uncharacterized protein" | 0.488 | 0.918 | 0.477 | 2e-81 | |
| UNIPROTKB|O95455 | 350 | TGDS "dTDP-D-glucose 4,6-dehyd | 0.488 | 0.931 | 0.471 | 2.5e-81 |
| TAIR|locus:2202960 RHM1 "rhamnose biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3123 (1104.4 bits), Expect = 0., P = 0.
Identities = 584/669 (87%), Positives = 621/669 (92%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MA+YTPKNILITGAAGFIASHV NRLIR+YP+YKIVVLDKLDYCSNLKNL PSK S NFK
Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAMRG LPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRV DVAKDICKLF+MDPE +IKFV+NRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GWSERT WEEGL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGRHFDGSE+N +++
Sbjct: 301 GWSERTTWEEGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATL 360
Query: 361 STNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLED 419
S Q+ MVVP + + +P+KPS+KFLIYG+TGWI I +EYGKGRLED
Sbjct: 361 SEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLED 420
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+ D+QSVKPTHVFN+AGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCR+HG+LM
Sbjct: 421 RSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLM 480
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYD HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM
Sbjct: 481 MNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 540
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWNFTNPGVVS
Sbjct: 541 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVS 600
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMY+ YINPEFKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 601 HNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 660
Query: 660 YVFEPNKKT 668
Y + PNKKT
Sbjct: 661 YAYGPNKKT 669
|
|
| TAIR|locus:2099372 RHM3 "rhamnose biosynthesis 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3006 (1063.2 bits), Expect = 2.1e-313, P = 2.1e-313
Identities = 562/668 (84%), Positives = 605/668 (90%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MATY PKNILITGAAGFIASHV NRL+R+YP+YKIVVLDKLDYCSNLKNL PSK+S NFK
Sbjct: 1 MATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN+LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM G PLPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEV HVYN+GT +ERRVIDVA DI KLF +DP+++I++VENRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GW ERT WEEGLRKT+EWYT+NP+WWGDVSGALLPHPRMLMMPG RH DGS+E+K
Sbjct: 301 GWCERTNWEEGLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGN 360
Query: 361 STNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDC 420
T + V P S K S+KFLIYG+TGW+ IP+EYGKGRLED
Sbjct: 361 QTFTV----VTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDR 416
Query: 421 SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMM 480
+SLIAD++S+KP+HVFNAAG+TGRPNVDWCESHKT+TIR NVAGTLTLADVCR++ +LMM
Sbjct: 417 ASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMM 476
Query: 481 NYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 540
N+ATGCIFEYDAAHPEGSGIG+KEED PNFTGSFYSKTKAMVEELL+E+DNVCTLRVRMP
Sbjct: 477 NFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMP 536
Query: 541 ISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH 600
ISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWNFTNPGVVSH
Sbjct: 537 ISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSH 596
Query: 601 NEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKY 660
NEILEMYK YI P+FKW NF LEEQAKVIVAPRSNNEMD +KL KEFPE+LSIKDSLIKY
Sbjct: 597 NEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKY 656
Query: 661 VFEPNKKT 668
VFEPNK+T
Sbjct: 657 VFEPNKRT 664
|
|
| TAIR|locus:2024902 MUM4 "MUCILAGE-MODIFIED 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2984 (1055.5 bits), Expect = 4.6e-311, P = 4.6e-311
Identities = 560/666 (84%), Positives = 603/666 (90%)
Query: 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFV 62
TY PKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCS+LKNL PS +S NFKFV
Sbjct: 5 TYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFV 64
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
KGDIAS DLVN+LLITE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG
Sbjct: 65 KGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 124
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
QIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI
Sbjct: 125 QIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 184
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
TTRGNNVYGPNQFPEK+IPKFILLAM G PLPIHGDGSNVRSYLYCEDVAEAFE +LHKG
Sbjct: 185 TTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 244
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGW 302
E+GHVYNVGTK+ERRVIDVA+DICKLF DPE+SI+FVENRPFNDQRYFLDDQKL LGW
Sbjct: 245 EIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGW 304
Query: 303 SERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVST 362
ERT WE+GL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGR DGS E K VSS
Sbjct: 305 QERTNWEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSS--- 361
Query: 363 NNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDCSS 422
N +Q+ VV S K S+KFLIYG+TGW+ I +EYGKGRLED +S
Sbjct: 362 NTVQTFTVVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRAS 421
Query: 423 LIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNY 482
L+AD++S+KPTHVFNAAG+TGRPNVDWCESHK +TIR NVAGTLTLADVCR++ +LMMN+
Sbjct: 422 LVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNF 481
Query: 483 ATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPIS 542
ATGCIFEYDA HPEGSGIG+KEED PNF GSFYSKTKAMVEELL+E+DNVCTLRVRMPIS
Sbjct: 482 ATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPIS 541
Query: 543 SDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE 602
SDLNNPRNFITKISRYNKVV+IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE
Sbjct: 542 SDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE 601
Query: 603 ILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVF 662
ILEMYK YI P FKW NFT+EEQAKVIVA RSNNEMD SKL KEFPE+LSIK+SL+KYVF
Sbjct: 602 ILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVF 661
Query: 663 EPNKKT 668
EPNK+T
Sbjct: 662 EPNKRT 667
|
|
| TAIR|locus:2015489 NRS/ER "nucleotide-rhamnose synthase/epimerase-reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 226/296 (76%), Positives = 257/296 (86%)
Query: 373 VSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDCSSLIADVQSVKP 432
V+ + S FLIYG+TGWI I + YG GRL+D S++AD++SVKP
Sbjct: 2 VADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKP 61
Query: 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDA 492
+HVFNAAGVTGRPNVDWCESHK +TIRTNVAGTLTLAD+CR+ G++++NYATGCIFEYD+
Sbjct: 62 SHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDS 121
Query: 493 AHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFI 552
HP GSGIG+KEEDTPNFTGSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL NPRNFI
Sbjct: 122 GHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFI 181
Query: 553 TKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYIN 612
TKI+RY KVV+IPNSMT+LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMY+ YI+
Sbjct: 182 TKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYID 241
Query: 613 PEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 668
P F W NFTLEEQAKVIVAPRSNNE+DA+KLK EFPEL+SIK+SLIK+VFEPNKKT
Sbjct: 242 PSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297
|
|
| WB|WBGene00015298 C01F1.3 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 569 (205.4 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 124/323 (38%), Positives = 188/323 (58%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFV 62
YTPKN++ITG GFI S+ N + +P V +DKL S+ +N+ S + S +K V
Sbjct: 3 YTPKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLV 62
Query: 63 KGDIAS-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
DI + A ++N E IDT++HFAA + + E +NN+ LE +
Sbjct: 63 LTDIKNEAAILNVFEQNE-IDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTY 121
Query: 122 GQIRRFIHVSTDEVYGETD-EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
G+I+RF+H+STDEVYG++D + G E S+L+P NPY+ATK E V AY Y LP
Sbjct: 122 GKIKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLP 181
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLA-MRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239
++T R NN+YGPNQ+ K++P+FI +A +RG I G G +RS+L+ +D + + +
Sbjct: 182 IVTARMNNIYGPNQWDVKVVPRFIEIAKVRG-EYTIQGSGKQLRSWLFVDDASAGLKAVC 240
Query: 240 HKGEVGHVYNVGTKKERRVIDVAKDI-----CKLFSMDPETSIKFVENRPFNDQRYFLDD 294
KGE+ +YN+GT E+ V D+AK I +L K + +RP+ND RY +
Sbjct: 241 EKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISI 300
Query: 295 QKLTS-LGWSERTIWEEGLRKTI 316
+K + LGW T +++G+R T+
Sbjct: 301 EKAKNDLGWEPTTSFDDGMRHTV 323
|
|
| DICTYBASE|DDB_G0279465 tgds "putative dTDP-D-glucose 4,6-dehydratase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 697 (250.4 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 142/270 (52%), Positives = 185/270 (68%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ ILITG AGFI SH+ L + + KI+VLDKLDYCSN+ NL NFKF KG+I
Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNI 69
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
++L+ + E ID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++++
Sbjct: 70 LDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKK 128
Query: 127 FIHVSTDEVYG----ETDED---AV-VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
FI+VSTDEVYG E ++D ++ ++E S L PTNPYSA+KAGAE LV +Y +S+
Sbjct: 129 FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFK 188
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
LPVI TR NN+YGP Q+PEK+IPKFI L + IHG G N R+YLY +D+ AF+ I
Sbjct: 189 LPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDII 248
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKL 268
L KGE+G+VYN+GT E +DVAK I +
Sbjct: 249 LRKGEIGNVYNIGTDFEISNLDVAKKIINI 278
|
|
| MGI|MGI:1923605 Tgds "TDP-glucose 4,6-dehydratase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 164/337 (48%), Positives = 220/337 (65%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G + +
Sbjct: 78 CDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLF---SMDPETS--IKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + + ET + +V +RP ND RY + +K+ SL
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + WEEG++KT+EWY +N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRKNFHNWKNAEKALEPFP 349
|
|
| RGD|1306544 Tgds "TDP-glucose 4,6-dehydratase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 162/337 (48%), Positives = 219/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP Y I+ LDKLDYC++LKNL P N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L +E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ ++ +
Sbjct: 78 CDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTA-YEARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDQEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KGE G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLF---SMDPETS--IKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + D ET + +V +RP ND RY + +K+ SL
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEKIHSL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + WEEG++KT+EWY +N W + AL P P
Sbjct: 313 GWKPKVPWEEGIKKTVEWYRENFHNWKNAEKALEPFP 349
|
|
| UNIPROTKB|F1RP60 TGDS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 161/337 (47%), Positives = 216/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASHV L+ +YP Y IV LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVLL A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLFS-----MDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + E + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTIEWY +N W + AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNAEKALEPFP 349
|
|
| UNIPROTKB|O95455 TGDS "dTDP-D-glucose 4,6-dehydratase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 159/337 (47%), Positives = 217/337 (64%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI
Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI 77
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEK 136
Query: 127 FIHVSTDEVYGET-DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
FI+VSTDEVYG + D++ E+S PTNPY+++KA AE V +Y Y PV+ TR
Sbjct: 137 FIYVSTDEVYGGSLDKEF----DESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITR 192
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
+NVYGP+Q+PEK+IPKFI L IHG G R++LY DV EAF +L KG+ G
Sbjct: 193 SSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPG 252
Query: 246 HVYNVGTKKERRVIDVAKDICKLFS-----MDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
+YN+GT E V+ +AK++ +L + E + +V +RP ND RY + +K+ L
Sbjct: 253 EIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGL 312
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHP 337
GW + W+EG++KTIEWY +N W +V AL P P
Sbjct: 313 GWRPKVPWKEGIKKTIEWYRENFHNWKNVEKALEPFP 349
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SYM5 | RHM1_ARATH | 4, ., 2, ., 1, ., - | 0.8863 | 1.0 | 0.9985 | yes | no |
| Q9LH76 | RHM3_ARATH | 4, ., 2, ., 1, ., - | 0.8577 | 0.9940 | 1.0 | no | no |
| Q9LPG6 | RHM2_ARATH | 4, ., 2, ., 1, ., - | 0.8560 | 0.9940 | 0.9955 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_1680019 | SubName- Full=Putative uncharacterized protein; (671 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| estExt_fgenesh4_pm.C_LG_I0410 | SubName- Full=Putative uncharacterized protein; (302 aa) | • | • | • | • | 0.900 | |||||
| eugene3.00030924 | SubName- Full=Putative uncharacterized protein; (302 aa) | • | • | • | • | 0.900 | |||||
| gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | ||||||||
| gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | ||||||||
| grail3.0018042501 | UDP-glucose 4-epimerase (EC-5.1.3.2) (348 aa) | • | • | 0.899 | |||||||
| eugene3.40280001 | UTP--glucose-1-phosphate uridylyltransferase (308 aa) | • | 0.899 | ||||||||
| eugene3.00440223 | UTP--glucose-1-phosphate uridylyltransferase (EC-2.7.7.9) (469 aa) | • | 0.899 | ||||||||
| eugene3.00101501 | UDP-glucose 6-dehydrogenase (EC-1.1.1.22) (480 aa) | • | 0.899 | ||||||||
| eugene3.00061661 | galactose-1-phosphate uridylyltransferase (EC-2.7.7.10) (348 aa) | • | 0.899 | ||||||||
| estExt_fgenesh4_pm.C_LG_XVII0156 | UDP-glucose 6-dehydrogenase (EC-1.1.1.22) (481 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 668 | |||
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 0.0 | |
| PLN02778 | 298 | PLN02778, PLN02778, 3,5-epimerase/4-reductase | 0.0 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 1e-173 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 1e-136 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 1e-124 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 1e-83 | |
| PRK10084 | 352 | PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; | 7e-81 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 1e-64 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 9e-61 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 3e-59 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 3e-57 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 1e-54 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 4e-52 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 5e-47 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 1e-45 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 2e-44 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 9e-43 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 1e-40 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 3e-40 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 2e-38 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 4e-38 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 8e-38 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 3e-31 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 9e-27 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 4e-26 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 6e-26 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 6e-26 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 3e-25 | |
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 8e-24 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 2e-23 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 3e-23 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 5e-23 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 6e-23 | |
| PLN02206 | 442 | PLN02206, PLN02206, UDP-glucuronate decarboxylase | 2e-22 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 5e-22 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 3e-21 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 6e-21 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 7e-21 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 3e-19 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 4e-19 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 8e-19 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 2e-18 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 6e-18 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 1e-16 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 2e-16 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 3e-16 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 4e-16 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 3e-15 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 4e-15 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 1e-14 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 1e-14 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 2e-14 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 8e-14 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 1e-13 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-13 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 9e-13 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-12 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 3e-12 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 5e-12 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 5e-12 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 6e-12 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 7e-12 | |
| TIGR03589 | 324 | TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd | 3e-11 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 4e-11 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 8e-11 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 1e-10 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 3e-10 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 7e-10 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 8e-10 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 9e-10 | |
| TIGR01472 | 343 | TIGR01472, gmd, GDP-mannose 4,6-dehydratase | 1e-09 | |
| cd05255 | 382 | cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth | 2e-09 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 2e-09 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 4e-09 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 6e-09 | |
| cd05261 | 248 | cd05261, CAPF_like_SDR_e, capsular polysaccharide | 1e-08 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-08 | |
| PLN02653 | 340 | PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | 2e-07 | |
| TIGR04130 | 337 | TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd | 8e-07 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 2e-06 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 4e-06 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 6e-06 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 6e-05 | |
| PLN02572 | 442 | PLN02572, PLN02572, UDP-sulfoquinovose synthase | 6e-05 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 1e-04 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 3e-04 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 3e-04 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 5e-04 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 8e-04 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 8e-04 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 0.001 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 0.001 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 0.001 | |
| PRK08125 | 660 | PRK08125, PRK08125, bifunctional UDP-glucuronic ac | 0.001 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 0.003 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 0.004 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 1481 bits (3837), Expect = 0.0
Identities = 598/669 (89%), Positives = 626/669 (93%), Gaps = 5/669 (0%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
MATY PKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCSNLKNL PSK+S NFK
Sbjct: 1 MATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK 60
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
FVKGDIASADLVN+LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
Sbjct: 61 FVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
TGQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
Sbjct: 121 TGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
VITTRGNNVYGPNQFPEKLIPKFILLAM+G PLPIHGDGSNVRSYLYCEDVAEAFE +LH
Sbjct: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSL 300
KGEVGHVYN+GTKKERRVIDVAKDICKLF +DPE SIKFVENRPFNDQRYFLDDQKL L
Sbjct: 241 KGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKL 300
Query: 301 GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSV 360
GW ERT WEEGL+KT+EWYT NPDWWGDVSGALLPHPRMLMMPG R FDGSEE K SS
Sbjct: 301 GWQERTSWEEGLKKTMEWYTSNPDWWGDVSGALLPHPRMLMMPGVRLFDGSEEIKLSSSG 360
Query: 361 STNNIQSRMVVPVSKC-SSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED 419
S Q+ +VV SSP KPS+KFLIYGRTGWIGGLLGKLCEK+GI +EYGKGRLED
Sbjct: 361 S----QTGLVVVTKPAGSSPGKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLED 416
Query: 420 CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
SSL+AD+++VKPTHVFNAAGVTGRPNVDWCESHK +TIR NV GTLTLADVCR++G+LM
Sbjct: 417 RSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLM 476
Query: 480 MNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539
MN+ATGCIFEYDA HPEGSGIG+KEED PNFTGSFYSKTKAMVEELL+EYDNVCTLRVRM
Sbjct: 477 MNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNVCTLRVRM 536
Query: 540 PISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599
PISSDL+NPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS
Sbjct: 537 PISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 596
Query: 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
HNEILEMYK YI+P FKW NFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIK+SLIK
Sbjct: 597 HNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIK 656
Query: 660 YVFEPNKKT 668
YVFEPNKKT
Sbjct: 657 YVFEPNKKT 665
|
Length = 668 |
| >gnl|CDD|178377 PLN02778, PLN02778, 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Score = 582 bits (1503), Expect = 0.0
Identities = 237/292 (81%), Positives = 265/292 (90%)
Query: 377 SSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVF 436
+ ++KFLIYG+TGWIGGLLGKLC+++GI F YG GRLE+ +SL AD+ +VKPTHVF
Sbjct: 3 GTAGSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVF 62
Query: 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPE 496
NAAGVTGRPNVDWCESHK +TIR NV GTLTLADVCR+ G+++ NYATGCIFEYD AHP
Sbjct: 63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPL 122
Query: 497 GSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS 556
GSGIG+KEEDTPNFTGSFYSKTKAMVEELLK Y+NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 123 GSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLSNPRNFITKIT 182
Query: 557 RYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFK 616
RY KVVNIPNSMT+LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMY+ YI+P F
Sbjct: 183 RYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFT 242
Query: 617 WVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPNKKT 668
W NFTLEEQAKVIVAPRSNNE+D +KLK+EFPELL IK+SLIKYVFEPNKKT
Sbjct: 243 WKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNKKT 294
|
Length = 298 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 495 bits (1278), Expect = e-173
Identities = 159/319 (49%), Positives = 212/319 (66%), Gaps = 5/319 (1%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
IL+TG AGFI S+ L+ YP+YKI+ LDKL Y NL+NL +S ++FVKGDI
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A+LV+ L E ID ++HFAA++HVD S + F + N+ GT+ LLEA + G R
Sbjct: 61 CDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYGVKR- 119
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F+H+STDEVYG+ +D E S L PT+PYSA+KA A++LV AY R+YGLPV+ TR
Sbjct: 120 FVHISTDEVYGDLLDDG--EFTETSPLAPTSPYSASKAAADLLVRAYHRTYGLPVVITRC 177
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+N YGP QFPEKLIP FIL A+ G PLPI+GDG NVR +LY ED A A E +L KG VG
Sbjct: 178 SNNYGPYQFPEKLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHARAIELVLEKGRVGE 237
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSER 305
+YN+G E +++ K I +L E+ I +V++RP +D+RY +D K+ LGW +
Sbjct: 238 IYNIGGGNELTNLELVKLILELLG-KDESLITYVKDRPGHDRRYAIDSSKIRRELGWRPK 296
Query: 306 TIWEEGLRKTIEWYTQNPD 324
+EEGLRKT+ WY +N
Sbjct: 297 VSFEEGLRKTVRWYLENRW 315
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-136
Identities = 143/327 (43%), Positives = 200/327 (61%), Gaps = 5/327 (1%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
IL+TG AGFI S+ ++ +P+ +V LDKL Y NL+NL + S ++FV+GDI
Sbjct: 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+LV+ L D ++HFAA++HVD S F + N+ GT+ LLEA + R
Sbjct: 61 CDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F H+STDEVYG+ D E + P++PYSA+KA +++LV AY R+YGLP TR
Sbjct: 121 FHHISTDEVYGDLGLDDDAFT-ETTPYNPSSPYSASKAASDLLVRAYVRTYGLPATITRC 179
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+N YGP QFPEKLIP I+ A+ G PLP++GDG +R +LY ED A + +L KG++G
Sbjct: 180 SNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGE 239
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDP---ETSIKFVENRPFNDQRYFLDDQKL-TSLGW 302
YN+G ER ++V K IC+L D I FVE+RP +D+RY +D K+ LGW
Sbjct: 240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGW 299
Query: 303 SERTIWEEGLRKTIEWYTQNPDWWGDV 329
+ +E GLRKT++WY N WW +
Sbjct: 300 RPQETFETGLRKTVDWYLDNEWWWEPL 326
|
Length = 340 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 370 bits (952), Expect = e-124
Identities = 145/321 (45%), Positives = 201/321 (62%), Gaps = 6/321 (1%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
IL+TG AGFI S+ ++ +P+ +++VLDKL Y NL+NL + + ++FVKGDI
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+LV+ L D ++HFAA++HVD S F + N+ GT+ LLEA + RF
Sbjct: 61 DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRF 120
Query: 128 IHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
H+STDEVYG+ DA E + L P++PYSA+KA ++ LV AY R+YGLP + TR
Sbjct: 121 HHISTDEVYGDLEKGDAFT---ETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITRC 177
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+N YGP QFPEKLIP I A+ G PLP++GDG VR +LY ED A +L KG VG
Sbjct: 178 SNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGE 237
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSER 305
YN+G ER ++V + I +L D + I VE+RP +D+RY +D K+ LGW+ +
Sbjct: 238 TYNIGGGNERTNLEVVETILELLGKDEDL-ITHVEDRPGHDRRYAIDASKIKRELGWAPK 296
Query: 306 TIWEEGLRKTIEWYTQNPDWW 326
+EEGLRKT++WY N WW
Sbjct: 297 YTFEEGLRKTVQWYLDNEWWW 317
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 267 bits (684), Expect = 1e-83
Identities = 139/344 (40%), Positives = 191/344 (55%), Gaps = 25/344 (7%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ ILITG AGFI S + +I + +VV+DKL Y NL +L P S F F K DI
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDI 60
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV------ 120
+ + D +MH AA++HVD S F + NI GT+ LLEA +
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 121 --TGQIRRFIHVSTDEVYGE--TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
RF H+STDEVYG+ + +D E + P++PYSA+KA ++ LV A+ R+
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFT---ETTPYAPSSPYSASKASSDHLVRAWLRT 177
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
YGLP + T +N YGP FPEKLIP IL A+ G PLP++G+G +R +LY ED A A
Sbjct: 178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLF-SMDPETS---------IKFVENRPFN 286
C+ G+VG YN+G ER+ +DV + IC+L + P I FV +RP +
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGH 297
Query: 287 DQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGDV 329
D RY +D K+ LGW + +E G+RKT++WY N WW V
Sbjct: 298 DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQV 341
|
Length = 355 |
| >gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 7e-81
Identities = 135/339 (39%), Positives = 191/339 (56%), Gaps = 23/339 (6%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI
Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICD 61
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------V 120
++ + D +MH AA++HVD S F + NI GT+VLLEA +
Sbjct: 62 RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDED 121
Query: 121 TGQIRRFIHVSTDEVYGETDE-DAVVGNH------EASQLLPTNPYSATKAGAEMLVMAY 173
RF H+STDEVYG+ D V + E + P++PYSA+KA ++ LV A+
Sbjct: 122 KKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAW 181
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R+YGLP I T +N YGP FPEKLIP IL A+ G PLPI+G G +R +LY ED A
Sbjct: 182 LRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241
Query: 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLF-SMDPETS-----IKFVENRPFND 287
A ++ +G+ G YN+G E++ +DV IC L + P+ + I +V +RP +D
Sbjct: 242 ALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHD 301
Query: 288 QRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDW 325
+RY +D K++ LGW + +E G+RKT+EWY N +W
Sbjct: 302 RRYAIDASKISRELGWKPQETFESGIRKTVEWYLANTEW 340
|
Length = 352 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 1e-64
Identities = 111/317 (35%), Positives = 165/317 (52%), Gaps = 18/317 (5%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+L+TG AGFI SH+ RL+ ++++VLD L + K +P N KF++GDI
Sbjct: 1 RVLVTGGAGFIGSHLVERLLER--GHEVIVLDNL--STGKKENLPEVKP-NVKFIEGDIR 55
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+LV F E +D + H AAQ V S + + + N+ GT LLEA + ++RF
Sbjct: 56 DDELVEFAF--EGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAAR-KAGVKRF 112
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
++ S+ VYG+ +H + P +PY+ +K E+ + R YGLP ++ R
Sbjct: 113 VYASSSSVYGDPPYLPKDEDHPPN---PLSPYAVSKYAGELYCQVFARLYGLPTVSLRYF 169
Query: 188 NVYGPNQFPEK----LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
NVYGP Q P +IP FI A++G P I+GDG R + Y EDV EA G
Sbjct: 170 NVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGA 229
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGW 302
G VYN+GT K V ++A+ I ++ + E + RP + + D K LGW
Sbjct: 230 GGEVYNIGTGKRTSVNELAELIREILGKELE--PVYAPPRPGDVRHSLADISKAKKLLGW 287
Query: 303 SERTIWEEGLRKTIEWY 319
+ +EEGLR T+EW+
Sbjct: 288 EPKVSFEEGLRLTVEWF 304
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 205 bits (523), Expect = 9e-61
Identities = 106/328 (32%), Positives = 160/328 (48%), Gaps = 23/328 (7%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
IL+TG AGFI SH+ RL+ + + LD+L L L+ +FV D+
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLR--DGLDPLLS-----GVEFVVLDL 51
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNS-FGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
DLV+ L D ++H AAQ+ V +S + EF N+ GT LLEA + G ++
Sbjct: 52 TDRDLVDELAKGV-PDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VK 109
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
RF+ S+ V + + + P NPY +K AE L+ AY R YGLPV+ R
Sbjct: 110 RFVFASSVSVVYGDPPPLPI-DEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILR 168
Query: 186 GNNVYGPNQFPEK---LIPKFILLAMRGLPLP-IHGDGSNVRSYLYCEDVAEAFECILHK 241
NVYGP P+ ++ FI ++G P+ I GDGS R ++Y +DVA+A L
Sbjct: 169 PFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN 228
Query: 242 GEVGHVYNVGT-KKERRVIDVAKDICKLFSMDPETSIKFVEN--RPFNDQRYFLDDQKL- 297
+ G V+N+G+ E V ++A+ + + I ++ R + LD K
Sbjct: 229 PDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPL-IVYIPLGRRGDLREGKLLDISKAR 286
Query: 298 TSLGWSERTIWEEGLRKTIEWYTQNPDW 325
+LGW + EEGL T+EW + +
Sbjct: 287 AALGWEPKVSLEEGLADTLEWLLKKLEL 314
|
Length = 314 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 3e-59
Identities = 89/246 (36%), Positives = 133/246 (54%), Gaps = 16/246 (6%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG GFI SH+ RL++ Y+++VL + S + +F +GD+
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQE--GYEVIVL-------GRRRRSESLNTGRIRFHEGDLTD 51
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
D + LL D ++H AAQ+ V SF + +F + N+ GT LLEA + G ++RF+
Sbjct: 52 PDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFV 110
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
S+ EVYG+ + + E + L P +PY+A K AE LV AY R+YGL + R N
Sbjct: 111 FASSSEVYGDVADPPI---TEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFN 167
Query: 189 VYGP---NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
VYGP + F +IP I + G P+ + GDG+ R +LY +DVA A L + G
Sbjct: 168 VYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGG 227
Query: 246 HVYNVG 251
+YN+G
Sbjct: 228 EIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 3e-57
Identities = 106/324 (32%), Positives = 160/324 (49%), Gaps = 17/324 (5%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVKGDI 66
N+L+TGA GFI SH+ RL+R +++ LD Y S L+ + F F+ GD+
Sbjct: 1 NVLVTGADGFIGSHLTERLLRE--GHEVRALD--IYNSFNSWGLLDNAVHDRFHFISGDV 56
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A V +L + D + H AA + S+ + + N++GT +LEA V +R
Sbjct: 57 RDASEVEYL--VKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLY-RKR 113
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+H ST EVYG + + +H + P +PYSA+K GA+ L +YGRS+GLPV R
Sbjct: 114 VVHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIR 173
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244
N YGP Q +IP I G L GDGS R + + +D A F IL E V
Sbjct: 174 PFNTYGPRQSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAIEAV 233
Query: 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND-----QRYFLDDQKL-T 298
G + N G+ +E + + A ++ + I + ++R + +R D +K
Sbjct: 234 GEIINNGSGEEISIGNPAVELIVE-ELGEMVLIVYDDHREYRPGYSEVERRIPDIRKAKR 292
Query: 299 SLGWSERTIWEEGLRKTIEWYTQN 322
LGW + +GLR+TIEW+
Sbjct: 293 LLGWEPKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 1e-54
Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 44/298 (14%)
Query: 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR---------LEDCSSLIADVQSVKPTHV 435
K LI G TG +G L +L ++ G G GR L D ++ ++ KP +
Sbjct: 1 KILITGATGMLGRALVRLLKERGYEV-IGTGRSRASLFKLDLTDPDAVEEAIRDYKPDVI 59
Query: 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHP 495
N A T VD CES R NV LA ++ G +++ +T +F
Sbjct: 60 INCAAYT---RVDKCESDPELAYRVNVLAPENLARAAKEVGARLIHISTDYVF------- 109
Query: 496 EGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISS---DLNNPRNF 551
+G YKEED PN Y K+K + E + LR N
Sbjct: 110 DGKKGPYKEEDAPNPLN-VYGKSKLLGEVAVLNANPRYLILRTSWLYGELKNGENFVEWM 168
Query: 552 ITKI---SRYNKVVNIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMY 607
+ N V + S T +L +E+ +RN L GI++ +N G +S E ++
Sbjct: 169 LRLAAERKEVNVVHDQIGSPTYAADLADAILELIERNSLTGIYHLSNSGPISKYEFAKLI 228
Query: 608 -------KKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEF-PELLSIKDSL 657
I P + + +N+ +D SKL++ + K++L
Sbjct: 229 ADALGLPDVEIKPITSS-------EYPLPARRPANSSLDCSKLEELGGIKPPDWKEAL 279
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 4e-52
Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 49/246 (19%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG AGFI SH+ RL+ +++VV+D+LD
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERG--HEVVVIDRLDV------------------------- 33
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
++H AA V S+ N E + N+ GT LLEA + G ++RF+
Sbjct: 34 ---------------VVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFV 77
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
+ S+ VYG + E + P +PY +K AE L+ +YG SYGLPV+ R N
Sbjct: 78 YASSASVYGSPEGLPEE---EETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLAN 134
Query: 189 VYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG-EVG 245
VYGP Q P + ++ FI A+ G PL + G G+ R +++ +DV A L E G
Sbjct: 135 VYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGG 194
Query: 246 HVYNVG 251
VYN+G
Sbjct: 195 GVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 5e-47
Identities = 92/318 (28%), Positives = 149/318 (46%), Gaps = 26/318 (8%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+LI G GFI SH+ + L+ P ++ V D ++ ++ +KGD
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGP--QVRVFD-----RSIPPYELPLGGVDY--IKGDYE 51
Query: 68 S-ADLVNFLLITESIDTIMHFAAQTHVDNSFGN-SFEFTKNNIYGTHVLLEACKVTGQIR 125
+ ADL + L IDT++H A+ T+ S N + N + T LLEAC G I
Sbjct: 52 NRADLESAL---VGIDTVIHLASTTNPATSNKNPILDIQTN-VAPTVQLLEACAAAG-IG 106
Query: 126 RFIHVSTD-EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ I S+ VYG ++ + E+ LP + Y +K E + Y YGL
Sbjct: 107 KIIFASSGGTVYGVPEQLPIS---ESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYTVL 163
Query: 185 RGNNVYGPNQFPEK---LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
R +N YGP Q P+ +IP + +RG P+ I GDG ++R Y+Y +D+ EA +L
Sbjct: 164 RISNPYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRS 223
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-L 300
+ V+N+G+ + ++ +I K+ + R + + LD + + L
Sbjct: 224 KGLEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYT--PARTTDVPKIVLDISRARAEL 281
Query: 301 GWSERTIWEEGLRKTIEW 318
GWS + E+GL KT +W
Sbjct: 282 GWSPKISLEDGLEKTWQW 299
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 1e-45
Identities = 94/345 (27%), Positives = 145/345 (42%), Gaps = 44/345 (12%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL---DYCSNLKNLIPSKASSNFKFVKGD 65
+LITG AGFI S++ ++ ++++ D L NL L ++ +FV GD
Sbjct: 3 VLITGGAGFIGSNLARFFLKQ--GWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I + + + + E ID I+H AAQ V S + + N GT +LEA +
Sbjct: 61 IRNRNDL--EDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118
Query: 126 RFIHVSTDEVYG---------ETD-----EDAVVGNHEASQLLPTN----PYSATKAGAE 167
FI ST++VYG E + S+ P + Y A+K A+
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178
Query: 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMRGLPLPIHG-DGSNVR 223
V YGR +GL + R + GP QF + + F+ A+ G PL I G G VR
Sbjct: 179 QYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQVR 238
Query: 224 SYLYCEDVAEAFECILHKGE--VGHVYNVGTKKERRV-----IDVAKDICKLFSMDPETS 276
L+ D+ + + G V+N+G +E V I + ++I E+
Sbjct: 239 DVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLELIALCEEIT---GRKMESY 295
Query: 277 IKFVENRPFNDQRYF-LDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
ENRP DQ ++ D +K+ GW E L + W
Sbjct: 296 --KDENRPG-DQIWYISDIRKIKEKPGWKPERDPREILAEIYAWI 337
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 2e-44
Identities = 100/330 (30%), Positives = 157/330 (47%), Gaps = 43/330 (13%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+C+RL+ + ++++ +D + +N+ NF+F++ D+
Sbjct: 1 KRILITGGAGFLGSHLCDRLLED--GHEVICVDNF-FTGRKRNIEHLIGHPNFEFIRHDV 57
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
L + +D I H A + N + K N+ GT +L K G R
Sbjct: 58 -----TEPLYL--EVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA--R 108
Query: 127 FIHVSTDEVYGETDEDAVV--------GNHEASQLLPTNP------YSATKAGAEMLVMA 172
+ ST EVYG D V GN NP Y K AE L MA
Sbjct: 109 VLLASTSEVYG----DPEVHPQPESYWGN--------VNPIGPRSCYDEGKRVAETLCMA 156
Query: 173 YGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230
Y R +G+ V R N YGP P +++ FI+ A+RG P+ ++GDG+ RS+ Y D
Sbjct: 157 YHRQHGVDVRIARIFNTYGPRMHPNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSD 216
Query: 231 VAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY 290
+ E +++ G N+G +E ++++A+ + KL ++ I F+ + +R
Sbjct: 217 LVEGLIRLMNSDYFGGPVNLGNPEEFTILELAELVKKL--TGSKSEIVFLPLPEDDPKRR 274
Query: 291 FLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
D K LGW + EEGLR+TIE++
Sbjct: 275 RPDISKAKELLGWEPKVPLEEGLRRTIEYF 304
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 9e-43
Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 42/345 (12%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLK--NLIPSKASSNFKFV 62
IL+TGAAGFI HV RL+ ++V +D L+ Y LK L S FKFV
Sbjct: 1 MKILVTGAAGFIGFHVAKRLLER--GDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFV 58
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
KGD+ + + L D ++H AAQ V S N + +NI G LLE C+ G
Sbjct: 59 KGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFG 118
Query: 123 QIRRFIHVSTDEVYGE------TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
++ ++ S+ VYG +++D V +H P + Y+ATK E++ Y
Sbjct: 119 -VKHLVYASSSSVYGLNTKMPFSEDDRV--DH------PISLYAATKKANELMAHTYSHL 169
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
YG+P R VYGP P+ + F + G P+ + DG+ R + Y +D+ E
Sbjct: 170 YGIPTTGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVEGVV 229
Query: 237 CILHKGEVGH------------------VYNVGTKKERRVIDVAKDICKLFSMDPETSIK 278
L + VYN+G +++D + + K +
Sbjct: 230 RALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEKAL--GKKAKKN 287
Query: 279 FVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQN 322
++ + + + D KL LG+ +T EEG+++ +EWY +N
Sbjct: 288 YLPMQKGDVPETYADISKLQRLLGYKPKTSLEEGVKRFVEWYKEN 332
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 1e-40
Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 49/346 (14%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDI 66
IL+TG AG+I SH +L+ + +++V+LD L + + +P + + FV+GD+
Sbjct: 1 KILVTGGAGYIGSHTVRQLLES--GHEVVILDNL--SNGSREALPRGERITPVTFVEGDL 56
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+L++ L ID ++HFA V S ++ +NN+ GT LLEA + G +++
Sbjct: 57 RDRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG-VKK 115
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-YGLPVITTR 185
FI S+ VYGE + E S L P NPY +K +E ++ ++ + R
Sbjct: 116 FIFSSSAAVYGEPSSIPIS---EDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYVILR 172
Query: 186 GNNVYG----------PNQFPEKLIPKFILLAMRGL--PLPIHG------DGSNVRSYLY 227
NV G P LIP + G L I G DG+ VR Y++
Sbjct: 173 YFNVAGAHPSGDIGEDPPGITH-LIP-YACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH 230
Query: 228 CEDVAE----AFECILHKGEVGHVYNVGTKKE---RRVIDVAKDICKLFSMDPETSIKFV 280
D+A+ A E +L+ G HVYN+G + VI+ K +
Sbjct: 231 VMDLADAHLAALEYLLNGGGS-HVYNLGYGQGFSVLEVIEAFKKVSG-------KDFPVE 282
Query: 281 E--NRPFNDQRYFLDDQK-LTSLGWS-ERTIWEEGLRKTIEWYTQN 322
RP + D K LGW + T EE ++ W ++N
Sbjct: 283 LAPRRPGDPASLVADASKIRRELGWQPKYTDLEEIIKDAWRWESRN 328
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 3e-40
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 36/299 (12%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+L+TG AG+I SH +L++ +++VVLD L + K + FKF +GD+
Sbjct: 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNL--SNGHKIALLKLQ---FKFYEGDL 53
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
L+ + ID ++HFAA V S N ++ NN+ GT L+EA TG +++
Sbjct: 54 LDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKK 112
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
FI ST VYGE + E S L P NPY +K +E ++ ++ V+ R
Sbjct: 113 FIFSSTAAVYGEPTTSPIS---ETSPLAPINPYGRSKLMSEEILRDAAKANPFKVVILRY 169
Query: 187 NNVYGPN------QFPEK---LIPKFILLAMRGLP-LPIHG------DGSNVRSYLYCED 230
NV G Q LIP A+ L I G DG+ +R Y++ +D
Sbjct: 170 FNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDD 229
Query: 231 VAE----AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRP 284
+A+ A + L +G +++N+G+ V++V + K+ D P ++ R
Sbjct: 230 LADAHVLALK-YLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP---VEIAPRRA 284
|
Length = 329 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 2e-38
Identities = 96/334 (28%), Positives = 147/334 (44%), Gaps = 32/334 (9%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+L+TG AG+I SH L+ Y +VVLD L + + +P +F +GDI
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEA--GYDVVVLDNL--SNGHREALPRIEKIRIEFYEGDIR 56
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
++ + ID ++HFAA V S ++ NN+ GT LLEA + G ++ F
Sbjct: 57 DRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHG-VKNF 115
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
+ S+ VYGE + + E + L PTNPY TK E ++ ++ GL + R
Sbjct: 116 VFSSSAAVYGEPETVPI---TEEAPLNPTNPYGRTKLMVEQILRDLAKAPGLNYVILRYF 172
Query: 188 NVYG--PN-------QFPEKLIPKFILLAMRGL--PLPIHG------DGSNVRSYLYCED 230
N G P+ Q P LIP ++L G L I G DG+ VR Y++ D
Sbjct: 173 NPAGAHPSGLIGEDPQIPNNLIP-YVLQVALGRREKLAIFGDDYPTPDGTCVRDYIHVVD 231
Query: 231 VAEAFECILHKGEVG---HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND 287
+A+A L K E G +YN+GT + V++V + K+ + R +
Sbjct: 232 LADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKVSG--KPIPYEIAPRRAGDP 289
Query: 288 QRYFLDDQK-LTSLGWSERTIWEEGLRKTIEWYT 320
D K LGW + E+ W +
Sbjct: 290 ASLVADPSKAREELGWKPKRDLEDMCEDAWNWQS 323
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 4e-38
Identities = 95/309 (30%), Positives = 134/309 (43%), Gaps = 26/309 (8%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL------IPSKASSNFKFV 62
+L+TGA GFI SH+ L+R E + VL Y N N P + + V
Sbjct: 1 VLVTGADGFIGSHLVEALVRQGYEVRAFVL----Y--NSFNSWGWLDTSPPEVKDKIEVV 54
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
GDI D V + D + H AA + S+ + N+ GT +L+A + G
Sbjct: 55 TGDIRDPDSVR--KAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARDLG 112
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+ + +H ST EVYG V E L +PYSA+K GA+ L +++ RS+ PV
Sbjct: 113 -VEKVVHTSTSEVYGTAQ---YVPIDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVT 168
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL-HK 241
R N YGP Q +IP I G G S R + Y D F I
Sbjct: 169 IIRPFNTYGPRQSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESD 228
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN--RPFNDQ--RYFLDDQKL 297
VG V N+G+ E + D K I ++ M E I+ E RP + R + D+ K+
Sbjct: 229 KTVGEVINIGSNFEISIGDTVKLIAEI--MGSEVEIETDEERLRPEKSEVERLWCDNSKI 286
Query: 298 TSL-GWSER 305
L GW +
Sbjct: 287 KELTGWQPK 295
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 8e-38
Identities = 96/315 (30%), Positives = 146/315 (46%), Gaps = 18/315 (5%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI- 66
IL+TG AGFI SH+ +RL+ ++VV+D L +N+ P + F+FVK D+
Sbjct: 1 RILVTGGAGFIGSHLVDRLLEE--GNEVVVVDNL-SSGRRENIEPEFENKAFRFVKRDLL 57
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+AD V + DT+ H AA V + + N+ T+ +LEA + G ++R
Sbjct: 58 DTADKV----AKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKR 112
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ S+ VYGE V+ E LP + Y A+K AE L+ AY +G R
Sbjct: 113 IVFASSSTVYGEAK---VIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRF 169
Query: 187 NNVYGPNQFPEKLIPKFI--LLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244
N+ GP +I FI L L + GDG +SYLY D +A K
Sbjct: 170 ANIVGPRS-THGVIYDFINKLKRNPNE-LEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTE 227
Query: 245 G-HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND-QRYFLDDQKLTSLGW 302
G +++N+G V ++A+ + + + P + D LD +KL +LGW
Sbjct: 228 GVNIFNLGNDDTISVNEIAEIVIEELGLKPRFKYSGGDRGWKGDVPYMRLDIEKLKALGW 287
Query: 303 SERTIWEEGLRKTIE 317
R EE +RKT+
Sbjct: 288 KPRYNSEEAVRKTVR 302
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 3e-31
Identities = 88/336 (26%), Positives = 129/336 (38%), Gaps = 46/336 (13%)
Query: 8 NILITGAAGFIASHVCNRLIRN-YPEYKIV------VLDKLDYCSNLKNLIPSKASSNFK 60
LITG G S++ L+ Y + IV D++D+ K+
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKD--------RIT 52
Query: 61 FVKGDIA-SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
GD+ S+ L + D I H AAQ+HV SF + + N GT LLEA +
Sbjct: 53 LHYGDLTDSSSLRRAIEKVRP-DEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIR 111
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
+ G RF S+ E YG+ E + E + P +PY+ +K A+ + Y +YGL
Sbjct: 112 ILGLDARFYQASSSEEYGKVQE---LPQSETTPFRPRSPYAVSKLYADWITRNYREAYGL 168
Query: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMR---GLPLPIH-GDGSNVRSYLYCEDVAEAF 235
+ R N GP + + K R GL + G+ R + D EA+
Sbjct: 169 FAVNGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKLGNLDAKRDWGDARDYVEAY 228
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFL--- 292
+L +GE Y + T + V + + F T VE D RYF
Sbjct: 229 WLLLQQGE-PDDYVIATGETHSVREFVE---LAFEESGLTGDIEVE----IDPRYFRPTE 280
Query: 293 ------DDQKLT-SLGW----SERTIWEEGLRKTIE 317
D K LGW S + E L +E
Sbjct: 281 VDLLLGDPSKAREELGWKPEVSFEELVREMLDADLE 316
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 9e-27
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 53/345 (15%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD---KLDYC--SNLKNLIPSKASSNFKF 61
K +L+TG GF S + L + LD + +NL N I S
Sbjct: 5 KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISS-------- 56
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
+GDI + + + + + H AAQ V S+ + E + N+ GT LLEA + T
Sbjct: 57 TRGDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRET 116
Query: 122 GQIRRFIHVSTDEVYGETD------EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
G ++ ++V++D+ Y + E+ +G H+ PYS++K AE+++ +Y
Sbjct: 117 GSVKAVVNVTSDKCYENKEWGWGYRENDPLGGHD--------PYSSSKGCAELIISSYRN 168
Query: 176 SYGLP---------VITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSY 225
S+ P + + R NV G + E +++P I G + I + +R +
Sbjct: 169 SFFNPENYGKHGIAIASARAGNVIGGGDWAEDRIVPDCIRAFEAGERVIIRNPNA-IRPW 227
Query: 226 LYCED-------VAEAFECILHKGEVGHVYNVGTKKE--RRVIDVAKDICKLFSMDPETS 276
+ + +AE E +N G E V+++ + + + + D
Sbjct: 228 QHVLEPLSGYLLLAEKL--YERGEEYAEAWNFGPDDEDAVTVLELVEAMARYWGEDARWD 285
Query: 277 IKFVENRPFNDQRYF-LDDQK-LTSLGWSERTIWEEGLRKTIEWY 319
+ N ++ LD K T LGW R EE L T+ WY
Sbjct: 286 LD--GNSHPHEANLLKLDCSKAKTMLGWRPRWNLEETLEFTVAWY 328
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 4e-26
Identities = 76/296 (25%), Positives = 119/296 (40%), Gaps = 40/296 (13%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL----KNLIPSKAS 56
A T K +L+TG G I S +C ++++ P+ +I++ + +Y L L
Sbjct: 245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPK-EIILFSRDEY--KLYLIDMELREKFPE 301
Query: 57 SNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 116
+F GD+ D V + +D + H AA HV N E K N+ GT + E
Sbjct: 302 LKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAE 361
Query: 117 ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
A G +++F+ +STD+ + PTN ATK AE L A R+
Sbjct: 362 AAIKNG-VKKFVLISTDKA-----------------VNPTNVMGATKRLAEKLFQAANRN 403
Query: 177 YGLP---VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R NV G +IP F G PL + D R + + E
Sbjct: 404 VSGTGTRFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTV-TDPDMTR---FFMTIPE 456
Query: 234 AFECILHKGEVGHVYNVGTKKER---RVIDVAKDICKLFSMDPET--SIKFVENRP 284
A + +L G + + ++ID+AK + +L P +IK + RP
Sbjct: 457 AVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRP 512
|
Length = 588 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 6e-26
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD----KLDYCSNLKNLIPSKAS-SNFKF 61
K IL+TG AG I S + ++++ + K++V D KL L + S+ +F
Sbjct: 3 KTILVTGGAGSIGSELVRQILK-FGPKKLIVFDRDENKLH---ELVRELRSRFPHDKLRF 58
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
+ GD+ + + D + H AA HV + N E K N+ GT +++A
Sbjct: 59 IIGDVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIEN 118
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LP 180
G + +F+ +STD+ AV N P N ATK AE L++A
Sbjct: 119 G-VEKFVCISTDK--------AV--N-------PVNVMGATKRVAEKLLLAKNEYSSSTK 160
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI-HGDGSNVRSYLYCEDVAEAFECIL 239
T R NV G ++P F +G PL + D + + + EA + +L
Sbjct: 161 FSTVRFGNVLGSRG---SVLPLFKKQIKKGGPLTVTDPD---MTRFFM--TIPEAVDLVL 212
Query: 240 HKGEVGH---VYNVGTKKERRVIDVAKDICKLFSMDP--ETSIKFVENRP 284
+G ++ + +++D+A+ + +L +P + I F RP
Sbjct: 213 QACILGDGGGIFLLDMGPPVKILDLAEALIELLGYEPYEDIPIFFTGLRP 262
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 6e-26
Identities = 84/332 (25%), Positives = 131/332 (39%), Gaps = 53/332 (15%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+L+TGA GFI + ++L+ E +I V + S DI
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRIAV-----------RNAENAEPSVVLAELPDID 49
Query: 68 SADLVNFLLITESIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
S + +D ++H AA+ HV D ++ K N T L A G ++
Sbjct: 50 SFTDL-----FLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG-VK 103
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
RF+ +S+ +V GE A E P + Y +K AE ++ G S G+ V+ R
Sbjct: 104 RFVFLSSVKVNGEGTVGAPF--DETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILR 161
Query: 186 GNNVYGP----NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA-FECILH 240
VYGP N + + L RGLPLP G N RS + +++ +A + CI
Sbjct: 162 PPMVYGPGVRGN------FARLMRLIDRGLPLPP-GAVKNRRSLVSLDNLVDAIYLCISL 214
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICK-------LFSMDPETSIKF---------VENRP 284
+ V ++ +I + L + P ++F V R
Sbjct: 215 PKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPV-PAGLLRFAAKLLGKRAVIQRL 273
Query: 285 FNDQRYFLDDQKL-TSLGWSERTIWEEGLRKT 315
F +Y D +K LGW EEGL++T
Sbjct: 274 FGSLQY--DPEKTQNELGWRPPISLEEGLQET 303
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-25
Identities = 74/288 (25%), Positives = 115/288 (39%), Gaps = 48/288 (16%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLD----KLDYCSNLKNLIPSKASSNFKFVKG 64
+L+TG G I S +C ++++ P+ KI++ KL + L +F G
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNPK-KIILFSRDEFKLY--EIRQELRQEYNDPKLRFFIG 57
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ + + + +DT+ H AA HV N E K N+ GT + EA G +
Sbjct: 58 DVRDRERLERAMEQHGVDTVFHAAALKHVPLVEYNPMEAIKTNVLGTENVAEAAIENG-V 116
Query: 125 RRFIHVSTDE-VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP--- 180
+F+ +STD+ V PTN ATK AE L A R G
Sbjct: 117 EKFVLISTDKAVN------------------PTNVMGATKRLAEKLFQAANRESGSGKTR 158
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI-HGDGSNVRSYLYCEDVAEAFECIL 239
R NV G +IP F G P+ + H D R + + EA + +L
Sbjct: 159 FSVVRFGNVLGSRG---SVIPLFKKQIANGGPVTVTHPD--MTR---FFMTIPEAVQLVL 210
Query: 240 HKGEVGH---VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP 284
G +G ++ + +++D+AK M + IK RP
Sbjct: 211 QAGAMGKGGEIFVLDMGPPVKIVDLAKA------MIGDIEIKITGLRP 252
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 8e-24
Identities = 93/346 (26%), Positives = 144/346 (41%), Gaps = 38/346 (10%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL-----KNLIPSKASSNFKF 61
+ IL+TG AG+I SH +L+ YK+VV+D LD S K L N F
Sbjct: 6 RTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGD-NLVF 62
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
K D+ + + + + D ++HFA V S + NN+ GT LLE
Sbjct: 63 HKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH 122
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE-MLVMAYGRSYGLP 180
G ++ + S+ VYG+ +E E L TNPY TK E + +
Sbjct: 123 G-CKKLVFSSSATVYGQPEEVPCT---EEFPLSATNPYGRTKLFIEEICRDIHASDPEWK 178
Query: 181 VITTRGNNVYG----------PNQFPEKLIPKFILLAMRGLP-LPIHG------DGSNVR 223
+I R N G P P L+P +A+ P L + G DG+ VR
Sbjct: 179 IILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR 238
Query: 224 SYLYCEDVAEAFECILHK----GEVG-HVYNVGTKKERRVIDVAKDICKLFSMDPETSIK 278
Y++ D+A+ L K ++G YN+GT K V+++ K + + +K
Sbjct: 239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEK--ASGKKIPLK 296
Query: 279 FVENRPFNDQRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWYTQNP 323
RP + + + +K LGW + +E R W ++NP
Sbjct: 297 LAPRRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP 342
|
Length = 352 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 2e-23
Identities = 81/330 (24%), Positives = 138/330 (41%), Gaps = 51/330 (15%)
Query: 9 ILITGAAGFIASHVCNRLIRN-YPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
IL+TG G + S + L R Y +V + D+
Sbjct: 2 ILVTGHRGLVGSAIVRVLARRGYEN--VVFRTSKEL---------------------DLT 38
Query: 68 SADLVNFLLITESIDTIMHFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
+ V E D ++H AA+ + ++ F N + +V+ A G +
Sbjct: 39 DQEAVRAFFEKEKPDYVIHLAAKVGGIVANMTYPADF-LRDNLLINDNVI-HAAHRFG-V 95
Query: 125 RRFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTN-PYSATKAGAEMLVMAYGRSYG 178
++ + + + +Y + DE ++ PTN Y+ K L AY + YG
Sbjct: 96 KKLVFLGSSCIYPDLAPQPIDESDLL----TGPPEPTNEGYAIAKRAGLKLCEAYRKQYG 151
Query: 179 LPVITTRGNNVYGPN-QFPEK-------LIPKFILLAMRGL-PLPIHGDGSNVRSYLYCE 229
I+ N+YGP+ F + LI KF +RG + + G G+ R +LY +
Sbjct: 152 CDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSD 211
Query: 230 DVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR 289
D+A A +L + + NVG+ E + ++A+ I ++ + + I F ++P R
Sbjct: 212 DLARAIVFLLENYDEPIIVNVGSGVEISIRELAEAIAEV--VGFKGEIVFDTSKPDGQPR 269
Query: 290 YFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
LD KL +LGW T E+G+R+T EWY
Sbjct: 270 KLLDVSKLRALGWFPFTPLEQGIRETYEWY 299
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 3e-23
Identities = 87/338 (25%), Positives = 129/338 (38%), Gaps = 45/338 (13%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ L+TGA GFI SH+ RL + + D ++ + + +F D+
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAE--GHYVRGAD------WKSPEHMTQPTDDDEFHLVDL 52
Query: 67 ASADLVNFLLITESIDTIMHFAA---------QTHVDNSFGNSFEFTKNNIYGTHVLLEA 117
+ N L TE +D + H AA H + N+ N +LEA
Sbjct: 53 REME--NCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNT---LINFN-----MLEA 102
Query: 118 CKVTGQIRRFIHVSTDEVYGET--DEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMA 172
++ G + RF+ S+ VY E E VV E P P Y K E L
Sbjct: 103 ARING-VERFLFASSACVYPEFKQLETTVVRLRE-EDAWPAEPQDAYGWEKLATERLCQH 160
Query: 173 YGRSYGLPVITTRGNNVYGP----NQFPEKLIPKF---ILLAMRGLPLPIHGDGSNVRSY 225
Y YG+ R +N+YGP + EK + A G I GDG RS+
Sbjct: 161 YNEDYGIETRIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSF 220
Query: 226 LYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPF 285
Y +D E L + + G N+G+ + + ++A+ + E I P
Sbjct: 221 TYIDDCVEGLR-RLMESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPLE--IIHHTPGPQ 277
Query: 286 NDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQN 322
+ D+ L LGW T EEGLR T W +
Sbjct: 278 GVRGRNSDNTLLKEELGWEPNTPLEEGLRITYFWIKEQ 315
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 5e-23
Identities = 82/343 (23%), Positives = 123/343 (35%), Gaps = 57/343 (16%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TGA GF+ S++ L+ + +V D L L + V+GD+
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDA-VLLDGL-------PVEVVEGDLTD 52
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSF--EFTKNNIYGTHVLLEACKVTGQIRR 126
A + + + D + H AA T S E + N+ GT +L+A G +RR
Sbjct: 53 AASLAAAM--KGCDRVFHLAAFT----SLWAKDRKELYRTNVEGTRNVLDAALEAG-VRR 105
Query: 127 FIHVSTDEVYGETDEDAV--VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+H S+ G + + N Y +K AE+ V+ GL V+
Sbjct: 106 VVHTSSIAALGGPPDGRIDETTPWNERPFP--NDYYRSKLLAELEVLEAAAE-GLDVVIV 162
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
+ V+GP +L + G LP G S V DVAE + KG
Sbjct: 163 NPSAVFGPGDEGPTSTGLDVLDYLNGKLPAYPPGGTSFV----DVRDVAEGHIAAMEKGR 218
Query: 244 VGHVY-----NV-------------GTKKERRVIDVAKDIC---------KLFSMDPETS 276
G Y N+ G K RR I +L P +
Sbjct: 219 RGERYILGGENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSELKARLTGKPPLLT 278
Query: 277 IKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
+ R + D+ LG+S R + EE LR T+ W
Sbjct: 279 PR--TARVLRRNYLYSSDKARRELGYSPRPL-EEALRDTLAWL 318
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 6e-23
Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 36/347 (10%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVKG 64
+L+TG +G+I SH C +L++N + +V+LD L C++ ++++P K FV+G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEG 57
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
DI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + +
Sbjct: 58 DIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-V 116
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-------- 176
+ I S+ VYG+ + V + P +PY +K E ++ ++
Sbjct: 117 KNLIFSSSATVYGDQPKIPYVESFPTGT--PQSPYGKSKLMVEQILTDLQKAQPDWSIAL 174
Query: 177 --YGLPV-ITTRGNNVYGPNQFPEKLIPKFILLAM-RGLPLPIHG------DGSNVRSYL 226
Y PV G+ P P L+P +A+ R L I G DG+ VR Y+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI 234
Query: 227 YCEDVAE----AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN 282
+ D+A+ A E + +K V H+YN+G V+DV K + + F
Sbjct: 235 HVMDLADGHVAAMEKLANKPGV-HIYNLGAGVGSSVLDVVNAFSK--ACGKPVNYHFAPR 291
Query: 283 RPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGD 328
R + Y+ D K L W +E + T W +++P + D
Sbjct: 292 REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD 338
|
Length = 338 |
| >gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-22
Identities = 84/313 (26%), Positives = 144/313 (46%), Gaps = 28/313 (8%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+++TG AGF+ SH+ +RL+ ++V+D + +N++ ++ NF+ ++ D+
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGD--SVIVVDNF-FTGRKENVMHHFSNPNFELIRHDVVE 178
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L+ +D I H A + N + K N+ GT +L K G RF+
Sbjct: 179 PILL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFL 229
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVI 182
ST EVYG+ + V + + NP Y K AE L M Y R + V
Sbjct: 230 LTSTSEVYGDPLQHPQVETYWGN----VNPIGVRSCYDEGKRTAETLTMDYHRGANVEVR 285
Query: 183 TTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
R N YGP + +++ F+ A+R PL ++GDG RS+ + D+ E ++
Sbjct: 286 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 345
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS- 299
VG +N+G E ++++AK + + ++DP I+F N + + D K
Sbjct: 346 GEHVGP-FNLGNPGEFTMLELAKVVQE--TIDPNAKIEFRPNTEDDPHKRKPDITKAKEL 402
Query: 300 LGWSERTIWEEGL 312
LGW + +GL
Sbjct: 403 LGWEPKVSLRQGL 415
|
Length = 442 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 99.3 bits (247), Expect = 5e-22
Identities = 85/317 (26%), Positives = 142/317 (44%), Gaps = 36/317 (11%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
I++TG AGF+ SH+ ++LI E ++V+D + +NL+ + F+ ++ D+
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDE--VIVIDNF-FTGRKENLVHLFGNPRFELIRHDVVE 179
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
L+ +D I H A + N + K N+ GT +L K G RF+
Sbjct: 180 PILL-------EVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFL 230
Query: 129 HVSTDEVYGETDE----DAVVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYG 178
ST EVYG+ E + GN NP Y K AE L M Y R G
Sbjct: 231 LTSTSEVYGDPLEHPQKETYWGN--------VNPIGERSCYDEGKRTAETLAMDYHRGAG 282
Query: 179 LPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
+ V R N YGP + +++ F+ +R P+ ++GDG RS+ Y D+ +
Sbjct: 283 VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLV 342
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296
++ VG +N+G E ++++A+ + + ++D +I+F N + + D K
Sbjct: 343 ALMEGEHVGP-FNLGNPGEFTMLELAEVVKE--TIDSSATIEFKPNTADDPHKRKPDISK 399
Query: 297 LTS-LGWSERTIWEEGL 312
L W + EGL
Sbjct: 400 AKELLNWEPKISLREGL 416
|
Length = 436 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 3e-21
Identities = 81/337 (24%), Positives = 139/337 (41%), Gaps = 49/337 (14%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
I++TG AGFI S++ L I+V+D L KNL+ K + I
Sbjct: 2 IIVTGGAGFIGSNLVKALNER-GITDILVVDNLSNGEKFKNLVGLK-------IADYIDK 53
Query: 69 ADLVNFLLITES---IDTIMHFAA---QTHVDNSF--GNSFEFTKNNIYGTHVLLEACKV 120
D +++ + I+ I H A T D + N++++TK LL C
Sbjct: 54 DDFKDWVRKGDENFKIEAIFHQGACSDTTETDGKYMMDNNYQYTKE-------LLHYCLE 106
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
RFI+ S+ VYG + E L P N Y +K + +G+
Sbjct: 107 KKI--RFIYASSAAVYGNGSLG-FAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQ 163
Query: 181 VITTRGNNVYGPNQFPEK----LIPKFILLAMRGLPLPI------HGDGSNVRSYLYCED 230
V+ R NVYGP ++ + ++ G + + + DG +R ++Y +D
Sbjct: 164 VVGLRYFNVYGPREYHKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKD 223
Query: 231 VAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ-- 288
V + L V ++NVGT + R D+A K ++ E I+++ F +
Sbjct: 224 VVKVNLFFLENPSVSGIFNVGTGRARSFNDLASATFK--ALGKEVKIEYI---DFPEDLR 278
Query: 289 ---RYFL--DDQKLTSLGWSER-TIWEEGLRKTIEWY 319
+ F D KL + G+++ EEG++ ++ Y
Sbjct: 279 GKYQSFTEADISKLRAAGYTKEFHSLEEGVKDYVKNY 315
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 6e-21
Identities = 76/325 (23%), Positives = 116/325 (35%), Gaps = 64/325 (19%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITGA G + + L Y+++ + S K D+
Sbjct: 1 KILITGATGMLGRALVRLLKERG--YEVIGTGR----------------SRASLFKLDLT 42
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
D V + D I++ AA T VD + + N+ L A K G R
Sbjct: 43 DPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGA--RL 100
Query: 128 IHVSTDEV-------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
IH+STD V Y E D P N Y +K E+ V+ Y
Sbjct: 101 IHISTDYVFDGKKGPYKEEDAPN-----------PLNVYGKSKLLGEVAVLNANPRY--- 146
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA-FECIL 239
+ R + +YG + E + + LA + + D + S Y D+A+A E I
Sbjct: 147 -LILRTSWLYGELKNGENFVEWMLRLAAERKEVNVVHDQ--IGSPTYAADLADAILELIE 203
Query: 240 HKGEVGHVYNVG-----TKKE--RRVIDVA-KDICKL---FSMDPETSIKFVENRPFNDQ 288
G +Y++ +K E + + D ++ S + + RP N
Sbjct: 204 RNSLTG-IYHLSNSGPISKYEFAKLIADALGLPDVEIKPITSSEYPLPAR----RPANSS 258
Query: 289 RYFLDDQKLTSLGWSERTIWEEGLR 313
LD KL LG + W+E LR
Sbjct: 259 ---LDCSKLEELGGIKPPDWKEALR 280
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 7e-21
Identities = 77/346 (22%), Positives = 128/346 (36%), Gaps = 49/346 (14%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
++L+TG +GF + +L+ Y + D + + N +F+KGDI
Sbjct: 1 SVLVTGGSGFFGERLVKQLLERGGTY-VRSFDIAP----PGEALSAWQHPNIEFLKGDIT 55
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ V L D + H AA G + + N+ GT +L+AC+ G +++F
Sbjct: 56 DRNDVEQAL--SGADCVFHTAAIVP---LAGPRDLYWEVNVGGTQNVLDACQRCG-VQKF 109
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPT--NPYSATKAGAEMLVMAYGRSYGLPVITTR 185
++ S+ V + E P + Y+ TKA AE++V+ L R
Sbjct: 110 VYTSSSSVIFGGQN--IHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALR 167
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI---LHKG 242
++GP + L+P A +GL + G G+N+ + Y ++A A L KG
Sbjct: 168 PAGIFGPGD--QGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKG 225
Query: 243 E--VGHVYNVGTK-------------KERRVIDVAKDICKL--------------FSMDP 273
+ G Y + K K F + P
Sbjct: 226 KTISGQTYFITDAEPHNMFELLRPVWKALGFGSRPKIRLSGPLAYCAALLSELVSFMLGP 285
Query: 274 ETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
R YF + LG++ R EEGL +T+ WY
Sbjct: 286 YFVFSPFYVRALVTPMYFSIAKAQKDLGYAPRYSNEEGLIETLNWY 331
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 3e-19
Identities = 56/211 (26%), Positives = 83/211 (39%), Gaps = 45/211 (21%)
Query: 11 ITGAAGFIASHVCNRLIRNYPEYKIVVL--------------DKLDYCSNLKNLIPSKAS 56
+TGA GF+ + +L+R+ PE KI L +L L KA
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRL---KAL 57
Query: 57 SNFKFVKGDIASADL----VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-NIYGT 111
V GD++ +L +F + E +D I+H AA + F + + N+ GT
Sbjct: 58 ERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVN----FVEPYSDLRATNVLGT 113
Query: 112 HVLLEACKVTGQIRRFIHVST-----------DEVYGETDEDAVVGNHEASQLLPTNPYS 160
+L K + F HVST +E + DED A N Y+
Sbjct: 114 REVLRLAK-QMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDE-----PALLGGLPNGYT 167
Query: 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYG 191
+K AE LV GLPV+ R + + G
Sbjct: 168 QSKWLAEQLVREAAG--GLPVVIYRPSIITG 196
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 4e-19
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 31/241 (12%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TG GF+ H+ L+R ++ V D L++ + +++GD+
Sbjct: 1 LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQ---VITYIEGDVTDK 57
Query: 70 -DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-----NIYGTHVLLEACKVTGQ 123
DL L + D ++H AA V FG + ++ N+ GT +L+AC G
Sbjct: 58 QDLRRAL---QGSDVVIHTAAIIDV---FG---KAYRDTIMKVNVKGTQNVLDACVKAG- 107
Query: 124 IRRFIHVSTDEVYGETDE-DAVVGNHEAS--QLLPTNPYSATKAGAEMLVM-AYGRSY-- 177
+R ++ S+ EV G +V E + + +PY +KA AE LV+ A G +
Sbjct: 108 VRVLVYTSSMEVVGPNSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKN 167
Query: 178 GLPVITT--RGNNVYGP-NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
G + T R ++G + F L P + L GL GD + + +Y +VA A
Sbjct: 168 GGRLYTCALRPAGIFGEGDPF---LFPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAWA 224
Query: 235 F 235
Sbjct: 225 H 225
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 8e-19
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 34/276 (12%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDI 66
+ +TG GF+ H+ RL+ N +K++VL + + I + + ++GD+
Sbjct: 1 VFVTGGTGFLGRHLVKRLLEN--GFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDL 58
Query: 67 ASADL----VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+L + +D ++H AA + + NI GT +LE
Sbjct: 59 TQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNE---DAWRTNIDGTEHVLELAARLD 115
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
I+RF +VST V G + + Q NPY +KA AE LV A L V
Sbjct: 116 -IQRFHYVSTAYVAGNREGNIRETELNPGQNFK-NPYEQSKAEAEQLVRAAATQIPLTVY 173
Query: 183 ----------TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232
T R + G + LLA G LP+ G+ + + + VA
Sbjct: 174 RPSIVVGDSKTGRIEKIDGLYEL-------LNLLAKLGRWLPMPGNKGARLNLVPVDYVA 226
Query: 233 EAFECILHKGEVG----HVYNVGTKKERRVIDVAKD 264
+A + K E H+ + + R + D+ K
Sbjct: 227 DAIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKS 262
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 86.7 bits (214), Expect = 2e-18
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 25/331 (7%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNL---IPSKASSNFK 60
PK LITG AGFI S + L+ + ++ LD Y NL ++ + + S F
Sbjct: 15 PKRWLITGVAGFIGSGLLEELL--FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI 72
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
F++GDI + +++D ++H AA V S + NI G +L A +
Sbjct: 73 FIQGDIRK--FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAAR- 129
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+ F + ++ YG+ + + E P +PY+ TK E+ + RSY
Sbjct: 130 DAHVSSFTYAASSSTYGDHPDLPKI---EERIGRPLSPYAVTKYVNELYADVFARSYEFN 186
Query: 181 VITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
I R NV+G Q P +IP++IL ++ P+ I+GDGS R + Y E+V +A
Sbjct: 187 AIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANL 246
Query: 237 CILHKGEVG---HVYNVGTKKERRVID---VAKDICKLFSMDPETSIKFVENRPFNDQRY 290
++ VYNV + + + +D L+ + + ++ D ++
Sbjct: 247 LSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKH 306
Query: 291 FLDD--QKLTSLGWSERTIWEEGLRKTIEWY 319
D + T L + +EGL++T++WY
Sbjct: 307 SQADITKIKTFLSYEPEFDIKEGLKQTLKWY 337
|
Length = 348 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 85.1 bits (211), Expect = 6e-18
Identities = 77/357 (21%), Positives = 137/357 (38%), Gaps = 67/357 (18%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+ L+ G +GF+ H+ +L+R + V D + +S +F GD+
Sbjct: 1 SCLVVGGSGFLGRHLVEQLLRRG-NPTVHVFDIRP---TFELD--PSSSGRVQFHTGDLT 54
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + + + H A+ H S N + K N+ GT ++EAC+ G +++
Sbjct: 55 DPQDLEKAFNEKGPNVVFHTASPDH--GS--NDDLYYKVNVQGTRNVIEACRKCG-VKKL 109
Query: 128 IHVST-DEVYGETDEDAVVGNHEASQ---LLPTNPYSATKAGAEMLVM-AYGRSYGLPVI 182
++ S+ V+ D + N + S + Y+ TKA AE LV+ A GL
Sbjct: 110 VYTSSASVVFNGQD----IINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLTC 165
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK- 241
R ++GP +L+P + A G GDG+N+ + Y E+VA A
Sbjct: 166 ALRPAGIFGPGD--RQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHILAADAL 223
Query: 242 ----------GEV----------------------GHVYNVGTKKERRVI----DVAKDI 265
GE G+ K R V + +
Sbjct: 224 LSSSHAETVAGEAFFITNDEPIYFWDFARAIWEGLGYERPPSIKLPRPVALYLASLLEWT 283
Query: 266 CKLFSMDPETS---IKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWY 319
CK+ +P + + + RYF ++ LG++ EEG+ +T++W+
Sbjct: 284 CKVLGKEPTFTPFRVALL-----CSTRYFNIEKAKKRLGYTPVVTLEEGIERTLQWF 335
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 1e-16
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 30/278 (10%)
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI A + + + + H AAQ V S+ + E + N+ GT LLEA + G
Sbjct: 59 GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGS 118
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY------ 177
++ ++V++D+ Y DE V G E L +PYS++KA AE+++ +Y S+
Sbjct: 119 VKAVVNVTSDKCY-RNDE-WVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANF 176
Query: 178 -GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVR----------SY 225
G+ + + R NV G + E +LIP I + I + R Y
Sbjct: 177 HGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDA-TRPWQHVLEPLSGY 235
Query: 226 LYCEDVAEAFECILHKGEVGHVYNVG--TKKERRVIDVAKDICKLFSMDPETSIKFVENR 283
L +AE + E +N G RV+++ D + + D +
Sbjct: 236 LL---LAEKL--FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLN 290
Query: 284 PFNDQRYF-LD-DQKLTSLGWSERTIWEEGLRKTIEWY 319
++ R LD + T LGW R EE + +T++WY
Sbjct: 291 HPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWY 328
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 2e-16
Identities = 82/327 (25%), Positives = 118/327 (36%), Gaps = 67/327 (20%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITGA G + + + L E++++ D+ L DI
Sbjct: 2 KILITGANGQLGTELRRAL---PGEFEVIATDR-------AEL--------------DIT 37
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
D V ++ D +++ AA T VD + N G L A G R
Sbjct: 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RL 95
Query: 128 IHVSTDEV--------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
+H+STD V Y ETD P N Y +K E V A G +
Sbjct: 96 VHISTDYVFDGEKGGPYKETDTPN-----------PLNVYGRSKLAGEEAVRAAGPRH-- 142
Query: 180 PVITTRGNNVYG--PNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
+ R + VYG N F + + LA G L + D S Y ED+A+A
Sbjct: 143 --LILRTSWVYGEYGNNFVKT----MLRLAKEGKELKVVDD--QYGSPTYTEDLADAILE 194
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE-------TSIKFVENRPFNDQRY 290
+L K + G VY++ E + AK I + +D E RP N
Sbjct: 195 LLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSS-- 252
Query: 291 FLDDQKLTSLGWSERTIWEEGLRKTIE 317
LD +KL W E L+ ++
Sbjct: 253 -LDTKKLEKAFGLSLPEWREALKALLD 278
|
Length = 281 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 3e-16
Identities = 45/252 (17%), Positives = 73/252 (28%), Gaps = 76/252 (30%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+L+TG +G I + L K++V+ + D
Sbjct: 1 VLVTGGSGGIGGAIARWLASR-GSPKVLVVSRRDV------------------------- 34
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEACKVTGQI 124
++H AA + N+ GT LLEA + +
Sbjct: 35 ---------------VVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKA 79
Query: 125 R---RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---G 178
+ RFI +S+ Y+A+KA + L + G
Sbjct: 80 KRLGRFILISSVAGLFG--------------APGLGGYAASKAALDGLAQQWASEGWGNG 125
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
LP G + P+ IL R HG + E+VA A
Sbjct: 126 LPATAVACGTWAGSGMAKGPVAPEEILGNRR------HG-----VRTMPPEEVARALLNA 174
Query: 239 LHKGEVGHVYNV 250
L + + G Y +
Sbjct: 175 LDRPKAGVCYII 186
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 4e-16
Identities = 58/245 (23%), Positives = 91/245 (37%), Gaps = 23/245 (9%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TGAAG + + RL + + LD+ P + ++V+ DI
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRR---------PPGSPPKVEYVRLDIRD 51
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ E D ++H A N+ GT +L+AC G + R +
Sbjct: 52 PAAADVFRERE-ADAVVHLAFILDPPRDGAERHRI---NVDGTQNVLDACAAAG-VPRVV 106
Query: 129 HVSTDEVYG-ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRG 186
S+ VYG D A + + P YS KA E L+ + R + L V R
Sbjct: 107 VTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRP 166
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
+ GP + LP+ G +L+ +DVA A + G G
Sbjct: 167 ATILGPG------TRNTTRDFLSPRRLPVPGGFDPPFQFLHEDDVARALVLAVRAGATG- 219
Query: 247 VYNVG 251
++NV
Sbjct: 220 IFNVA 224
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 3e-15
Identities = 83/337 (24%), Positives = 133/337 (39%), Gaps = 51/337 (15%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
I++TG AGFI S++ L I+V+D L NL + I
Sbjct: 1 IIVTGGAGFIGSNLVKALNERG-ITDILVVDNLRDGHKFLNLADLVIA-------DYIDK 52
Query: 69 ADLVNFLLITES--IDTIMHFAA---QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
D ++ L I+ I H A T D + +NN + LL+ C G
Sbjct: 53 EDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEY-----MMENNYQYSKRLLDWCAEKG- 106
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSATKAGAEMLVMAYGRSYGLP-- 180
FI+ S+ YG D G E +L P N Y +K + V L
Sbjct: 107 -IPFIYASSAATYG----DGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQ 161
Query: 181 VITTRGNNVYGPNQFPE--------KLIPKFILLAMRGLPL----PIHGDGSNVRSYLYC 228
V+ R NVYGP ++ + L + A + L DG +R ++Y
Sbjct: 162 VVGLRYFNVYGPREYHKGKMASVAFHLFNQIK--AGGNVKLFKSSEGFKDGEQLRDFVYV 219
Query: 229 EDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ 288
+DV + +L G G ++N+GT + R D+A ++ + I+++ P +
Sbjct: 220 KDVVDVNLWLLENGVSG-IFNLGTGRARSFNDLA--DAVFKALGKDEKIEYIPM-PEALR 275
Query: 289 ---RYFL--DDQKLTSLGWS-ERTIWEEGLRKTIEWY 319
+YF D KL + G+ T EEG++ ++W
Sbjct: 276 GRYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWL 312
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 4e-15
Identities = 79/335 (23%), Positives = 139/335 (41%), Gaps = 58/335 (17%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+LITG AG I SH+ L+ +++VV+D ++ + + +P N V+G I
Sbjct: 1 MKVLITGGAGQIGSHLIEHLLER--GHQVVVID--NFATGRREHLPDHP--NLTVVEGSI 54
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A LV+ L D ++H AA + D + +E T N+ G +++A K G ++R
Sbjct: 55 ADKALVDKLFGDFKPDAVVHTAA-AYKDPD--DWYEDTLTNVVGGANVVQAAKKAG-VKR 110
Query: 127 FIHVSTDEVYG-ETDEDAVVGNHEASQLLPTNP----YSATK-AGAEMLVMAYGRSYGLP 180
I+ T YG + + + +H P P Y+ +K AG L ++ G+
Sbjct: 111 LIYFQTALCYGLKPMQQPIRLDH------PRAPPGSSYAISKTAGEYYLELS-----GVD 159
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGL--PLPIH----GDGSN------VRSYLYC 228
+T R NV GP R + PLP G R +++
Sbjct: 160 FVTFRLANVTGP----------------RNVIGPLPTFYQRLKAGKKCFVTDTRRDFVFV 203
Query: 229 EDVAEAFECILHKGEVGH-VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND 287
+D+A + L G GH Y+ + ++ + ++ + + + ++ VE P +
Sbjct: 204 KDLARVVDKAL-DGIRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEVVELGPDDV 262
Query: 288 QRYFLDDQK-LTSLGWSERTIWEEGLRKTIEWYTQ 321
LD + GW E T E + + WY +
Sbjct: 263 PSILLDPSRTFQDFGWKEFTPLSETVSAALAWYDK 297
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 81/329 (24%), Positives = 126/329 (38%), Gaps = 49/329 (14%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK---G 64
+LITGA+GF+ + RL+ + P +++++D + KA S V G
Sbjct: 2 KVLITGASGFVGQRLAERLLSDVPNERLILIDV----------VSPKAPSGAPRVTQIAG 51
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE-FTKNNIYGTHVLLEACKVTGQ 123
D+A L+ L D + H AA V F+ + N+ GT LLEA + G
Sbjct: 52 DLAVPALIE-ALANGRPDVVFHLAA--IVSGGAEADFDLGYRVNVDGTRNLLEALRKNGP 108
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY-------GRS 176
RF+ S+ VYG V +H A L P + Y A KA E+L+ Y GR+
Sbjct: 109 KPRFVFTSSLAVYG-LPLPNPVTDHTA--LDPASSYGAQKAMCELLLNDYSRRGFVDGRT 165
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLP--LPIHGDGSNVRSYLYCEDVAEA 234
LP + R PN+ I + G LP +R +L + VA A
Sbjct: 166 LRLPTVCVRPGR---PNKAASAFASTIIREPLVGEEAGLP---VAEQLRYWL--KSVATA 217
Query: 235 FECILH----KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY 290
+H E T V V +++ L + ++ + P + +
Sbjct: 218 VANFVHAAELPAEKFGPRRDLTLPGLSVT-VGEELRALIPVAGLPALMLITFEPDEEIKR 276
Query: 291 F-------LDDQKLTSLGWSERTIWEEGL 312
D + SLG+ + GL
Sbjct: 277 IVFGWPTRFDATRAQSLGFVADSSLAAGL 305
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 41/253 (16%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
ILI G FI + L+ + + V ++ K +P + + GD
Sbjct: 1 MKILIIGGTRFIGKALVEELLAA--GHDVTVFNR----GRTKPDLPEGV----EHIVGDR 50
Query: 67 ASADLVNFLLITESIDTIMHFAAQT--HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D + LL E D ++ A T V+ L+A K G++
Sbjct: 51 NDRDALEELLGGEDFDVVVDTIAYTPRQVER------------------ALDAFK--GRV 90
Query: 125 RRFIHVSTDEVYG----ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+++I +S+ VY E + +A L Y K AE +++ + P
Sbjct: 91 KQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLI---EAAAFP 147
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE-CIL 239
R +YGP + +L F RG P+ + GDG ++ +++ +D+A A
Sbjct: 148 YTIVRPPYIYGPGDYTGRL-AYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAG 206
Query: 240 HKGEVGHVYNVGT 252
+ +G ++N+
Sbjct: 207 NPKAIGGIFNITG 219
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 2e-14
Identities = 69/312 (22%), Positives = 115/312 (36%), Gaps = 73/312 (23%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEY-KIVVL-------------------DKLDYCSN 46
K++LITGA GF+ + +L+R+ P+ KI +L D N
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60
Query: 47 LKNLIPSKASSNFKFVKGDIASADL----VNFLLITESIDTIMHFAAQTHVDNSFGNSFE 102
L L SK ++GD++ +L + + E ++ I+H AA +F +
Sbjct: 61 LNPLFESK----IVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATV----TFDERLD 112
Query: 103 FT-KNNIYGTHVLLEACKVTGQIRRFIHVST----------DEVYGETDEDAVVGNHEAS 151
N+ GT LLE K +++ F+HVST +E D +
Sbjct: 113 EALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADP-EKLIDIL 171
Query: 152 QLLPT---------------NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP 196
+L+ N Y+ TKA AE LV+ LP++ R + V + P
Sbjct: 172 ELMDDLELERATPKLLGGHPNTYTFTKALAERLVLKER--GNLPLVIVRPSIVGATLKEP 229
Query: 197 -------EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE-----AFECILHKGEV 244
L +G+ ++ D + V + + VA A + K
Sbjct: 230 FPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSGVRKPRE 289
Query: 245 GHVYNVGTKKER 256
VY+ G+
Sbjct: 290 LEVYHCGSSDVN 301
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 8e-14
Identities = 66/276 (23%), Positives = 110/276 (39%), Gaps = 26/276 (9%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL--EDCSSLIADVQSVKPTHVFNAAGV 441
MK LI G G +G L + E + L D +++ ++ +P V NAA
Sbjct: 1 MKILITGANGQLGTELRRALPGEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAY 60
Query: 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIG 501
T VD ES N G LA + G +++ +T +F+ + P
Sbjct: 61 T---AVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGP------ 111
Query: 502 YKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISSDLNNPRNFITKISRYNK 560
YKE DTPN + Y ++K EE ++ LR NN + ++++ K
Sbjct: 112 YKETDTPNPL-NVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGK 170
Query: 561 VVNIPN----SMTVLDELLPISIEMAKRNLR-GIWNFTNPGVVSHNEILEMYKKYINPEF 615
+ + + S T ++L +E+ ++ G+++ N G S E K I E
Sbjct: 171 ELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFA----KAIFEEA 226
Query: 616 KWVNFTLE---EQAKVIVAPR-SNNEMDASKLKKEF 647
+E A R +N+ +D KL+K F
Sbjct: 227 GVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAF 262
|
Length = 281 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 1e-13
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVL----------DKLDYCSNLKNLIPS---- 53
+L+TGA GF+ +++ L++ KI L ++L NLK +
Sbjct: 1 TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLI--DNLKEYGLNLWDE 58
Query: 54 KASSNFKFVKGDIASADLV----NFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIY 109
S K V GD++ +L ++ + E +D I+H A N E N+
Sbjct: 59 LELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANV---NWVYPYEELKPANVL 115
Query: 110 GTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA----VVGNHEASQLLPTNPYSATKAG 165
GT LL+ TG+++ VST V+ + +A + SQ N Y +K
Sbjct: 116 GTKELLKLA-ATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWV 174
Query: 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG 210
AE L+ + GLPV R N++G ++ F ++G
Sbjct: 175 AEKLLREA-ANRGLPVAIIRPGNIFGDSETGIGNTDDFFWRLLKG 218
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 70.7 bits (173), Expect = 3e-13
Identities = 49/300 (16%), Positives = 99/300 (33%), Gaps = 49/300 (16%)
Query: 384 MKFLIYGRTGWIGG-LLGKLCEK----------------EGIPFEYGKGRLEDCSSLIAD 426
M+ L+ G G+IG L+ +L E+ L D L+ +
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTD-RDLVDE 59
Query: 427 VQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYAT 484
+ P V + A + P D S + + NV GTL L + R G+ + +
Sbjct: 60 LAKGVPDAVIHLAAQSSVP--DSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSV 117
Query: 485 GCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRV-- 537
++ P E+ P + Y +K E+LL+ Y V LR
Sbjct: 118 SVVYGDPPPLP------IDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFN 171
Query: 538 ----RMPISSDLNNPRNFITKISRYNKVVNIPNS------MTVLDELLPISIEMAKRNLR 587
FI ++ + ++ I +D++ + +
Sbjct: 172 VYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG 231
Query: 588 GIWNFTNPGV-VSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKE 646
G++N + ++ E+ E + + + + + + + + +D SK +
Sbjct: 232 GVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKL---LDISKARAA 288
|
Length = 314 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 9e-13
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 29/258 (11%)
Query: 84 IMHFAAQTHVDNSFGNS---FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE-- 138
++ AA+ V N +F + N+ +++A G +++ + + + +Y +
Sbjct: 53 VILAAAK--VGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFA 109
Query: 139 ---TDEDAVVGNHEASQLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPN- 193
E A+ PTN Y+ K + AY YG I+ N+YGP+
Sbjct: 110 PQPIPETAL---LTGP-PEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD 165
Query: 194 QF-PEK------LIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEAFECILHK-GEV 244
F PE LI +F G P + G GS +R +L+ +D+A+A ++ +
Sbjct: 166 NFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGA 225
Query: 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304
HV NVG+ E + ++A+ + + + E + + ++P R +D KL SLGW
Sbjct: 226 EHV-NVGSGDEVTIKELAELVKE--VVGFEGELVWDTSKPDGTPRKLMDSSKLRSLGWDP 282
Query: 305 RTIWEEGLRKTIEWYTQN 322
+ ++GL++T +WY +N
Sbjct: 283 KFSLKDGLQETYKWYLEN 300
|
Length = 306 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 1e-12
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILI GA GFI + L+ +++ +L + + ++ P V+GD+
Sbjct: 1 ILILGATGFIGRALARELLEQ--GHEVTLLVRNTKRLSKEDQEPV------AVVEGDLRD 52
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
D ++ + + +D ++H A +F + ++ GT +LEA K G ++ FI
Sbjct: 53 LDSLSDAV--QGVDVVIHLAGAPRDTR------DFCEVDVEGTRNVLEAAKEAG-VKHFI 103
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
+S+ YG+ HE ++ P++PY A KA E ++ R LP R
Sbjct: 104 FISSLGAYGDL--------HEETEPSPSSPYLAVKAKTEAVL----REASLPYTIVRPGV 151
Query: 189 VYG 191
+YG
Sbjct: 152 IYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 3e-12
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 35/210 (16%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSK-------AS 56
+L+TGA GF+ +++ L+R + K++ L + L+ + S A
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60
Query: 57 SNFKFVKGDIASADL----VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTH 112
+ V GD++ L + + E++DTI+H A + + E N+ GT
Sbjct: 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWVYPYS---ELRGANVLGTR 117
Query: 113 VLLEACKVTGQIRRFIHVSTDEVY------GETDEDAVVGNHEASQLLPTNPYSATKAGA 166
+L +G+ + +VST V T++DA V Y+ +K A
Sbjct: 118 EVLRLA-ASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPP----PGLAGGYAQSKWVA 172
Query: 167 EMLVMAYGRSYGLPVITTR-----GNNVYG 191
E+LV GLPV R GN+ G
Sbjct: 173 ELLV-REASDRGLPVTIVRPGRILGNSYTG 201
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 5e-12
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 30/227 (13%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL----------DKLDYCSNLKNLIPSKAS 56
+N+L+TGA GF+ +++ L+ + K++ L +L+ +L ++
Sbjct: 1 RNVLLTGATGFLGAYLLLELLD-RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSA 59
Query: 57 SNFKFVKGDIASADL----VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTH 112
+ V GD+A DL + + E++D I+H AA + E N+ GT
Sbjct: 60 DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVN---HVFPYSELRGANVLGTA 116
Query: 113 VLLEACKVTGQIRRFIHVSTDEVY-------GETDEDAVVGNHEASQLLPTNPYSATKAG 165
+L TG+ + +VS+ V D D + Q Y +K
Sbjct: 117 EVLRLA-ATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQ-GLAGGYGRSKWV 174
Query: 166 AEMLV-MAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGL 211
AE LV A R GLPV R + G ++ F+ + GL
Sbjct: 175 AEKLVREAGDR--GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGL 219
|
Length = 382 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 5e-12
Identities = 81/323 (25%), Positives = 131/323 (40%), Gaps = 31/323 (9%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGDIA 67
I ITGA GFIASH+ RL + I+ D K KN S+ +F D+
Sbjct: 24 ICITGAGGFIASHIARRL--KAEGHYIIASDWK-------KNEHMSEDMFCHEFHLVDLR 74
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFG----NSFEFTKNNIYGTHVLLEACKVTGQ 123
+ N L +T+ +D + + AA G N NN + +LEA ++ G
Sbjct: 75 VME--NCLKVTKGVDHVFNLAADM---GGMGFIQSNHSVIMYNNTMISFNMLEAARING- 128
Query: 124 IRRFIHVSTDEVYGE-TDEDAVVGNHEASQ--LLPTNPYSATKAGAEMLVMAYGRSYGLP 180
++RF + S+ +Y E + V E+ P + Y K E L Y + +G+
Sbjct: 129 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIE 188
Query: 181 VITTRGNNVYGP----NQFPEKLIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAF 235
R +N+YGP EK F A+ + GDG RS+ + ++ E
Sbjct: 189 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGV 248
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQ 295
L K + N+G+ + + ++A+ L + + IK + R +
Sbjct: 249 -LRLTKSDFREPVNIGSDEMVSMNEMAEIA--LSFENKKLPIKHIPGPEGVRGRNSDNTL 305
Query: 296 KLTSLGWSERTIWEEGLRKTIEW 318
LGW+ ++GLR T W
Sbjct: 306 IKEKLGWAPTMRLKDGLRITYFW 328
|
Length = 370 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 6e-12
Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 23/227 (10%)
Query: 385 KFLIYGRTGWIGGLLGKLCEKEG---IPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGV 441
+ LI G G +G L + EG + + L D +L +++++P V N A
Sbjct: 1 RILITGANGQLGRELVQQLSPEGRVVVALTRSQLDLTDPEALERLLRAIRPDAVVNTAAY 60
Query: 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIG 501
T +VD ES N LA HG +++ +T +F D
Sbjct: 61 T---DVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVF--DGEGKR----P 111
Query: 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNK- 560
Y+E+D N + Y ++K E+ ++ L VR RNF+ + R
Sbjct: 112 YREDDATN-PLNVYGQSKLAGEQAVRAA-GPNALIVRTSWLYGGGGGRNFVRTMLRLAGR 169
Query: 561 ------VVNIPNSMTVLDELLPISIEMAKRNLR--GIWNFTNPGVVS 599
V + S T +L + + +R R G+++ N G S
Sbjct: 170 GEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCS 216
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 7e-12
Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 33/173 (19%)
Query: 387 LIYGRTGWIGGLLGKLCEKEGIP-----------------FEYGKGRLEDCSSLIADVQS 429
L+ G TG+IG L + +EG + +G L D +L +
Sbjct: 2 LVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLAE 61
Query: 430 VKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYA-TGCIF 488
V+P V + A +G V D IR NV GTL L + R G+ +A + ++
Sbjct: 62 VQPDAVIHLAAQSG---VGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSSEVY 118
Query: 489 EYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLR 536
+ + E+ S Y+ K E L++ Y LR
Sbjct: 119 ------GDVADPPITEDTPLGPL-SPYAAAKLAAERLVEAYARAYGLRAVILR 164
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 3e-11
Identities = 75/288 (26%), Positives = 118/288 (40%), Gaps = 49/288 (17%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK--ASSNFKFVKG 64
K+ILITG G +RL+ NY KI++ + LK + + +F G
Sbjct: 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSR----DELKQWEMQQKFPAPCLRFFIG 60
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ + + L +D ++H AA V + N FE + NI G +++A G +
Sbjct: 61 DVRDKERLTRAL--RGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-V 117
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMA---YGRSYGLPV 181
+R + +STD +A+ P N Y ATK ++ L +A S G
Sbjct: 118 KRVVALSTD---------------KAAN--PINLYGATKLASDKLFVAANNISGSKGTRF 160
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLP-LPIHGDGSNVRSYLYCED----VAEAFE 236
R NV G ++P F L G+ LPI D R ++ E V ++ E
Sbjct: 161 SVVRYGNVVGSRG---SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLE 216
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP 284
+ GE+ V ++ D+A+ +M PE K V RP
Sbjct: 217 -RMLGGEI----FVPKIPSMKITDLAE------AMAPECPHKIVGIRP 253
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 4e-11
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 65/357 (18%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
K +LI G GFI H+ R++ ++++ +D L +L+ F +GD
Sbjct: 1 MKKVLILGVNGFIGHHLSKRILET-TDWEVYGMDM--QTDRLGDLV---NHPRMHFFEGD 54
Query: 66 IASADLVNFLLITESI---DTIMHFAA----QTHVDNSFGNSFE--FTKNNIYGTHVLLE 116
I +N I + D I+ A T+V FE F N ++
Sbjct: 55 IT----INKEWIEYHVKKCDVILPLVAIATPATYVKQPL-RVFELDFEAN-----LPIVR 104
Query: 117 ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNP----YSATKAGAEMLV 170
+ G+ + ST EVYG ++ + EAS L+ P N Y+ +K + ++
Sbjct: 105 SAVKYGK--HLVFPSTSEVYGMCPDEEF--DPEASPLVYGPINKPRWIYACSKQLMDRVI 160
Query: 171 MAYGRSYGLPV--------ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222
AYG GL I +++Y P + +++ +F+ +RG P+ + GS
Sbjct: 161 WAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQK 220
Query: 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGT-KKERRVIDVAKDICKLFSMDPE---- 274
R++ +D +A I+ + G +YN+G K V ++A + +L + PE
Sbjct: 221 RAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAES 280
Query: 275 -TSIKFVENRPFNDQRY---FLDDQK--------LTSLGWSERTIWEEGLRKTIEWY 319
+K VE + Y + D Q + LGW+ +T ++ LR+ E Y
Sbjct: 281 AKKVKLVETT--SGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAY 335
|
Length = 347 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 8e-11
Identities = 54/254 (21%), Positives = 88/254 (34%), Gaps = 51/254 (20%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ + GA GFI +V NRL + +++V + + + ++ F
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKR--GSQVIVPYRCEAYARRLLVMGDLGQVLFVE----- 53
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHV-----LLEAC 118
DL + I ++++ D N G +E + HV L +A
Sbjct: 54 --FDLRDDESIRKALE---------GSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAA 102
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
K G + R IH+S G D + + Y +KA E V R
Sbjct: 103 KEAG-VERLIHISA---LG-ADAN------------SPSKYLRSKAEGEEAV----REAF 141
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
R + V+G ++ + +F L P+ G G +Y DVAEA
Sbjct: 142 PEATIVRPSVVFGRE---DRFLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARA 198
Query: 239 LHKGEV-GHVYNVG 251
L E G Y +
Sbjct: 199 LKDPETEGKTYELV 212
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIV-VLDKLDYCSNLKNLIPSKASS-NFKFVKGDI 66
+L+TGA GFIASH+ +L++ YK+ + L + LK L+ + + +FV D
Sbjct: 2 VLVTGATGFIASHIVEQLLKA--GYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDD 59
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+A + + +D ++H A+ + + GT +LEA K G ++R
Sbjct: 60 LTAPNA-WDEALKGVDYVIHVASPFPFTG-PDAEDDVIDPAVEGTLNVLEAAKAAGSVKR 117
Query: 127 FIHVST------------DEVYGETD--EDAVVGNHEASQLLPTNPYSATKAGAE 167
+ S+ +V+ E D + + ++ + Y A+K AE
Sbjct: 118 VVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSN------GLDAYIASKTLAE 166
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 3e-10
Identities = 60/285 (21%), Positives = 97/285 (34%), Gaps = 41/285 (14%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSKASSNFKFVKG 64
+L+TGA+GF+ASHV +L+ YK+ K+ ++L +L +
Sbjct: 1 VLVTGASGFVASHVVEQLLER--GYKVRATVRDPSKVKKVNHLLDL--DAKPGRLE---- 52
Query: 65 DIASADLVNFLLITESI---DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
+A ADL + E I + H A + N E K I GT L+A
Sbjct: 53 -LAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPN--EVIKPAIGGTLNALKAAAAA 109
Query: 122 GQIRRFIHVST--------DEVYGETDEDAVVGNHE--ASQLLPTNPYSATKAGAEMLVM 171
++RF+ S+ V G ++ E + Y+A+K AE
Sbjct: 110 KSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAW 169
Query: 172 AYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG-------SNVRS 224
+ + +IT G E P AM L +G
Sbjct: 170 KFADENNIDLITVIPTLTIGTIFDSE--TPSSSGWAM---SLITGNEGVSPALALIPPGY 224
Query: 225 YLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLF 269
Y++ D+ A L Y + T + K + K +
Sbjct: 225 YVHVVDICLAHIGCLELPIARGRY-ICTAGNFDWNTLLKTLRKKY 268
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 7e-10
Identities = 62/288 (21%), Positives = 101/288 (35%), Gaps = 51/288 (17%)
Query: 387 LIYGRTGWIGGLLGKLCEKEG---IPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443
L+ G G +G L +L + G + + + L D ++ A V+ +P V NAA T
Sbjct: 2 LVTGANGQLGRELTRLLAERGVEVVALDRPELDLTDPEAVAALVREARPDVVVNAAAYT- 60
Query: 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYK 503
VD ES N G LA+ C G +++ +T +F+ P Y+
Sbjct: 61 --AVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHISTDYVFDGAKGGP------YR 112
Query: 504 EEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP--ISSDLNNPRNFITKISRYNKV 561
E+D Y +TK E+ + N L +R NF+ + R +
Sbjct: 113 EDDPTGPLN-VYGRTKLAGEQAVLAA-NPRHLILRTAWVYG---EYGNNFVKTMLR---L 164
Query: 562 VNIPNSMTVLDELL--PISIE-------------MAKRNLRGIWNFTNPGVVSHNEILEM 606
+ + V+D+ L P S + L G ++ G S +
Sbjct: 165 AAERDELRVVDDQLGSPTSARDLADALLALIRKRLRGPALAGTYHLAGSGETSWYD---- 220
Query: 607 YKKYINPEFKWVNFTLEE------QAKVIVAPRSNNE-MDASKLKKEF 647
+ + I F A R N +D SKL+ F
Sbjct: 221 FARAI---FDEAGADGGRVRPIPTAEYPTPARRPANSVLDTSKLEATF 265
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 8e-10
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYK-IVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
L+TG GF+ H+ L+ E K I VLDK +++ S+ + ++GDI
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFG--NSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + + ++H AA V FG N E + N+ GT +LEAC ++R
Sbjct: 63 LSFLF--RACQGVSVVIHTAAIVDV---FGPPNYEELEEVNVNGTQAVLEACVQNN-VKR 116
Query: 127 FIHVSTDEVYG-ETDEDAVVGNHEASQLLPTN--PYSATKAGAEMLVM-AYGRSY--GLP 180
++ S+ EV G + E + T+ PY+++K AE +V+ A G G
Sbjct: 117 LVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGY 176
Query: 181 VITT--RGNNVYG 191
++T R +YG
Sbjct: 177 LVTCALRPMYIYG 189
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 70/264 (26%), Positives = 106/264 (40%), Gaps = 17/264 (6%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVK 63
K LITG G S++ L+ + Y + I + + +L P
Sbjct: 3 KVALITGITGQDGSYLAELLLEKGYEVHGIK-RRSSSFNTPRIHLYEDPHLNDPRLHLHY 61
Query: 64 GDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
GD+ D N L I E + D I + AAQ+HV SF + GT LLEA ++
Sbjct: 62 GDLT--DSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL 119
Query: 122 GQIR-RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
G+ + RF ST E+YG E E + P +PY+ K A + + Y SYGL
Sbjct: 120 GEKKTRFYQASTSELYGLVQEIP---QKETTPFYPRSPYAVAKLYAYWITVNYRESYGLF 176
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMR---GLPLPIH-GDGSNVRSYLYCEDVAEAFE 236
N P + + K R GL ++ G+ R + + +D EA
Sbjct: 177 ACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMW 236
Query: 237 CILHKGEVGHVYNVGTKKERRVID 260
+L + E Y + T + V +
Sbjct: 237 LMLQQEE-PDDYVIATGETHSVRE 259
|
Length = 345 |
| >gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 1e-09
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 58 NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNI-YGTHVLLE 116
K GD+ + + ++ I + AAQ+HV SF E+T + GT LLE
Sbjct: 56 RMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSF-EIPEYTADVDGIGTLRLLE 114
Query: 117 ACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 174
A + G I+ +F ST E+YG+ E + +E + P +PY+A K A + + Y
Sbjct: 115 AVRTLGLIKSVKFYQASTSELYGKVQE---IPQNETTPFYPRSPYAAAKLYAHWITVNYR 171
Query: 175 RSYGL 179
+YGL
Sbjct: 172 EAYGL 176
|
Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343 |
| >gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 2e-09
Identities = 62/294 (21%), Positives = 109/294 (37%), Gaps = 39/294 (13%)
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE--FTK-NNIYGTHVLLEA 117
F GD + + LL + D ++HFA Q S + +T+ NN+ GT LL A
Sbjct: 70 FYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHNNVIGTLNLLFA 129
Query: 118 CKVTGQIRRFIHVSTDEVYGETDED------AVVGNHEASQLL-PTNP---YSATKAGAE 167
K + + T YG + D + N L P Y +K
Sbjct: 130 IKEFDPDCHLVKLGTMGEYGTPNIDIPEGYITIEHNGRRDTLPYPKQAGSWYHLSKVHDS 189
Query: 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIP-----------------KFILLAMRG 210
+M +++G+ + VYG + +F + A G
Sbjct: 190 HNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDYDGVFGTVLNRFCVQAAIG 249
Query: 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHK----GEVGHVYNVGTKKERRVIDVAKDIC 266
PL ++G G R ++ D + E L GE V+N T++ V ++A+ +
Sbjct: 250 HPLTVYGKGGQTRGFISIRDTVQCLELALENPAKAGEY-RVFNQFTEQ-FSVGELAEMVA 307
Query: 267 KLFS-MDPETSIKFVEN-RPFNDQRYF-LDDQKLTSLGWSERTIWEEGLRKTIE 317
+ S + + ++ + N R ++ Y+ + KL LG + E L +
Sbjct: 308 EAGSKLGLDVKVEHLPNPRVEAEEHYYNAKNTKLLDLGLEPHYLSESLLDSILN 361
|
Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 2e-09
Identities = 60/319 (18%), Positives = 93/319 (29%), Gaps = 81/319 (25%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVK 63
IL+TGA GF+ V L+ +++ N P A++ V
Sbjct: 1 MKILVTGATGFVGGAVVRELLARG--HEVRAA-----VRN-----PEAAAALAGGVEVVL 48
Query: 64 GD--------IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
GD + + LLI+ +D F A
Sbjct: 49 GDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVR----------------AA 92
Query: 116 EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
EA ++ + +S V+G AS + KA E A R
Sbjct: 93 EAAGAG--VKHGVSLS------------VLGADAASPS----ALARAKAAVE----AALR 130
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAM-RGLPLPIHGDGSNVRSYLYCEDVAEA 234
S G+P T R Y FI A GLP+ G G S + +DVAEA
Sbjct: 131 SSGIPYTTLRRAAFYLGA------GAAFIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEA 182
Query: 235 F-ECILHKGEVGHVYNVGTKKERRVIDVAKDICK----------LFSMDPETSIKFVENR 283
+ G Y + + + ++A + ++ +
Sbjct: 183 LAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRPVGLIPEALAALTLALSGLGLL 242
Query: 284 PFNDQRYFLDDQKLTSLGW 302
P R + LG
Sbjct: 243 PGFVARALVAGDIGELLGD 261
|
Length = 275 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 58.7 bits (142), Expect = 4e-09
Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 46/283 (16%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI---PSKASSNFKFV 62
P I + GA GFI SH+C +L+ P +K++ LD Y +K+L+ S +F
Sbjct: 14 PLTICMIGAGGFIGSHLCEKLMTETP-HKVLALDV--YNDKIKHLLEPDTVPWSGRIQFH 70
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
+ +I + L+ + D ++ AA + + +N +++ C
Sbjct: 71 RINIKHDSRLEGLI--KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 128
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQ-----LLPTN--------------PYSATK 163
+R IH ST EVYG+T + +H Q +L + Y+ K
Sbjct: 129 --KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAK 186
Query: 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPN-QF------PEKLIPKFILLA------MRG 210
E L+ A G GL R N GP F P + +P+ +LA +R
Sbjct: 187 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR--VLACFSNNLLRR 244
Query: 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV--GHVYNVG 251
PL + G + R+++Y +D EA ++ GH++NVG
Sbjct: 245 EPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVG 287
|
Length = 386 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 6e-09
Identities = 72/324 (22%), Positives = 107/324 (33%), Gaps = 63/324 (19%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
ILITGA G + + +L V L + D+
Sbjct: 2 ILITGANGQLGRELVQQLSPEGRVV--VALTRSQL---------------------DLTD 38
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ + LL D +++ AA T VD + + + N L A G R +
Sbjct: 39 PEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLV 96
Query: 129 HVSTDEV--------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG-RSYGL 179
H+STD V Y E D P N Y +K E V A G +
Sbjct: 97 HISTDYVFDGEGKRPYREDDATN-----------PLNVYGQSKLAGEQAVRAAGPNAL-- 143
Query: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239
++ T +YG + + LA RG L + D + S Y +D+A +L
Sbjct: 144 -IVRTSW--LYGGGG-GRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALL 197
Query: 240 -HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE-------TSIKFVE-NRPFNDQRY 290
VY++ + + A+ I + D I E RP Y
Sbjct: 198 QRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAY 257
Query: 291 -FLDDQKLTSLGWSERTIWEEGLR 313
LD+ KL + W E LR
Sbjct: 258 SVLDNTKLVKTLGTPLPHWREALR 281
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 57/238 (23%), Positives = 84/238 (35%), Gaps = 67/238 (28%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
ILITGA GFI ++ RL + + I D+ +
Sbjct: 1 MKILITGAKGFIGKNLIARL-KEQKDDDIFFYDR------------------------ES 35
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--- 123
++L +FL D I H A N + EF N+ T LL+A G+
Sbjct: 36 DESELDDFLQ---GADFIFHLAGV----NRPKDEAEFESGNVGLTERLLDALTRNGKKPP 88
Query: 124 --IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
+ I + D NPY +K AE L+ Y R G PV
Sbjct: 89 ILLSSSIQAALD-----------------------NPYGKSKLAAEELLQEYARETGAPV 125
Query: 182 ITTRGNNVYG----PNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
R NV+G PN + F R LP+ I+ + + + +Y +DV +
Sbjct: 126 YIYRLPNVFGKWCRPNY--NSAVATFCYNIARDLPIQINDPAAEL-TLVYIDDVVDEL 180
|
This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 20/112 (17%)
Query: 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEY-- 490
V + A + G V + + TNV GTL L + R G+ F Y
Sbjct: 32 DVVVHLAALVG---VPASWDNPDEDFETNVVGTLNLLEAARKAGV--------KRFVYAS 80
Query: 491 -DAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN-----VCTLR 536
+ + G +EE+TP S Y +K E LL+ Y V LR
Sbjct: 81 SASVYGSPEG-LPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILR 131
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 52 PSKASSNFKFVKGDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKNNI- 108
P + K GD++ D + + I D + + AAQ+HV SF ++T + +
Sbjct: 55 PHPNKARMKLHYGDLS--DASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMP-DYTADVVA 111
Query: 109 YGTHVLLEACKVTGQIR----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164
G LLEA ++ GQ ++ + E+YG T E + P +PY+ K
Sbjct: 112 TGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP----QSETTPFHPRSPYAVAKV 167
Query: 165 GAEMLVMAYGRSYGL 179
A + Y +YGL
Sbjct: 168 AAHWYTVNYREAYGL 182
|
Length = 340 |
| >gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 8e-07
Identities = 68/242 (28%), Positives = 98/242 (40%), Gaps = 38/242 (15%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIR-NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFV 62
+ K +LITG G + V R + + E +I D+ K SK KF
Sbjct: 2 FKDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSK----LKFY 57
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
GD+ D + L T +D I H AA V + + E K N+ GT +LEA +
Sbjct: 58 IGDVR--DYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAA-IAN 114
Query: 123 QIRRFIHVSTDE-VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR---SYG 178
++R + +STD+ VY P N +KA E +++A R S
Sbjct: 115 GVKRVVCLSTDKAVY------------------PINAMGISKAMMEKVMVAKSRNVDSSK 156
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE----A 234
+ TR NV +IP F+ L G PL I D + R + ED + A
Sbjct: 157 TVICGTRYGNVMASRG---SVIPLFVDLIKAGKPLTI-TDPNMTRFMMTLEDAVDLVLYA 212
Query: 235 FE 236
FE
Sbjct: 213 FE 214
|
The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 76/330 (23%), Positives = 110/330 (33%), Gaps = 70/330 (21%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TGA G + + L ++V LD+ + D+
Sbjct: 1 ILVTGANGQLGRELTRLLAER--GVEVVALDRPE---------------------LDLTD 37
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ V L+ D +++ AA T VD + N G L EAC G I
Sbjct: 38 PEAVAALVREARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA--PLI 95
Query: 129 HVSTDEV--------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG-RSYGL 179
H+STD V Y E D P N Y TK E V+A R
Sbjct: 96 HISTDYVFDGAKGGPYREDDP-----------TGPLNVYGRTKLAGEQAVLAANPRHL-- 142
Query: 180 PVITTRGNNVYGP--NQFPEKLIPKFIL-LAMRGLPLPIHGD--GSNVRSYLYCEDVAEA 234
++ T VYG N F K +L LA L + D GS + + +
Sbjct: 143 -ILRTAW--VYGEYGNNF-----VKTMLRLAAERDELRVVDDQLGSPTSARDLADALLAL 194
Query: 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-----PETSIKFVE--NRPFND 287
L + Y++ E D A+ I D P + ++ RP N
Sbjct: 195 IRKRLRGPALAGTYHLAGSGETSWYDFARAIFDEAGADGGRVRPIPTAEYPTPARRPANS 254
Query: 288 QRYFLDDQKLTSLGWSERTIWEEGLRKTIE 317
LD KL + W E L + ++
Sbjct: 255 V---LDTSKLEATFGIPLPDWREALAEVLD 281
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 33/251 (13%)
Query: 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA 69
L+TGA GF+ S V L+ E +++V S+ +NL + + V+GD+
Sbjct: 4 LVTGATGFVGSAVVRLLLEQGEEVRVLVRPT----SDRRNL----EGLDVEIVEGDLRDP 55
Query: 70 DLVNFLLITESIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + + H AA + D E N+ GT LL A G + R
Sbjct: 56 ASLRKAV--AGCRALFHVAADYRLWAPDPE-----EMYAANVEGTRNLLRAALEAG-VER 107
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTN---PYSATKAGAEMLVMAYGRSYGLPVIT 183
++ S+ G D E + + Y +K AE + GLPV+
Sbjct: 108 VVYTSSVATLG-VRGDGTPA-DETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVI 165
Query: 184 TRGNNVYGPNQFPEKLIP--KFILLAMRGLPLPIHGD-GSNVRSYLYCEDVAEAFECILH 240
+ GP K P + I+ + G +P + D G N+ ++ +DVAE L
Sbjct: 166 VNPSTPIGP--RDIKPTPTGRIIVDFLNG-KMPAYVDTGLNL---VHVDDVAEGHLLALE 219
Query: 241 KGEVGHVYNVG 251
+G +G Y +G
Sbjct: 220 RGRIGERYILG 230
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 114 LLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 173
LL+A ++R I++S+ VYG+ + V E S P+ AE ++A
Sbjct: 83 LLDALAQLPAVQRVIYLSSTGVYGDQQGEWVD---ETSPPNPSTESGRALLEAEQALLAL 139
Query: 174 GRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
G P R +YGP + + + +G P G+ R ++ +D+
Sbjct: 140 GS---KPTTILRLAGIYGPG----RHPLRRLA---QGTGRPPAGNAPTNR--IHVDDLVG 187
Query: 234 AFECILHKGEVGHVYNV 250
A L + G VYNV
Sbjct: 188 ALAFALQRPAPGPVYNV 204
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 6e-05
Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 387 LIYGRTGWIGGLL------------------GKLCEKEGIPFEYGKGRLEDCSSLIADVQ 428
L+ G TG++G L +G+P E +G L D +SL A ++
Sbjct: 2 LVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLPVEVVEGDLTDAASLAAAMK 61
Query: 429 SVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIF 488
VF+ A T + + RTNV GT + D + G+ + + T I
Sbjct: 62 GCD--RVFHLAAFT-----SLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVH-TSSIA 113
Query: 489 EYDAAHPEGSGIGYKEEDTP---NFTGSFYSKTKAMVEELLKEY 529
G G +E TP + Y ++K + E + E
Sbjct: 114 ALG-----GPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEA 152
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 6e-05
Identities = 73/356 (20%), Positives = 126/356 (35%), Gaps = 70/356 (19%)
Query: 6 PKNILITGAAGF----IASHVCNRLIRNYPEYKIVVLDKL-----DYCSNLKNLIP---- 52
K +++ G G+ A H+ R Y++ ++D L D+ L +L P
Sbjct: 47 KKKVMVIGGDGYCGWATALHLSKR------GYEVAIVDNLCRRLFDHQLGLDSLTPIASI 100
Query: 53 --------SKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFE-- 102
+ + GDI + ++ + D ++HF Q S +
Sbjct: 101 HERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAV 160
Query: 103 FTK-NNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG----ETDEDAVVGNH---EASQLL 154
FT+ NN+ GT +L A K + + T YG + +E + H +
Sbjct: 161 FTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPY 220
Query: 155 PTNP---YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPN----QFPEKLIPK----- 202
P Y +K + +++G+ VYG E+LI +
Sbjct: 221 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG 280
Query: 203 --------FILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH----KGEVGHVYNV 250
F + A G PL ++G G R +L D E + GE V+N
Sbjct: 281 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEF-RVFNQ 339
Query: 251 GTKKERRVIDVAKDICKL---FSMDPETSIKFVENRPFNDQRYFLD--DQKLTSLG 301
T ++ V ++AK + K +D E V N + ++ + KL LG
Sbjct: 340 FT-EQFSVNELAKLVTKAGEKLGLDVEV--ISVPNPRVEAEEHYYNAKHTKLCELG 392
|
Length = 442 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 1e-04
Identities = 81/296 (27%), Positives = 123/296 (41%), Gaps = 68/296 (22%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+TG GFI + +RL+ E + VL + S L+ L + + GD+
Sbjct: 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLT 61
Query: 68 SADL-VNFLLITE--SIDTIMHFAA---QTHVDNSFGNSFEFTKNNIYGT-HVLLEACKV 120
L ++ I E ID ++H AA T + + N+ GT +V+ A ++
Sbjct: 62 EPGLGLSEADIAELGDIDHVVHLAAIYDLTADEEA------QRAANVDGTRNVVELAERL 115
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHE---------ASQLLPTNPYSATKAGAEMLVM 171
F HVS+ AV G++E Q LPT PY TK AE LV
Sbjct: 116 QA--ATFHHVSS---------IAVAGDYEGVFREDDFDEGQGLPT-PYHRTKFEAEKLV- 162
Query: 172 AYGRSY-GLP--------VI----TTRGNNVYGPNQFPEKLIPKFILLA-MRGLP--LPI 215
R GLP V+ T + + GP F F +LA + LP LP+
Sbjct: 163 ---REECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYF-------FKVLAKLAKLPSWLPM 212
Query: 216 HG-DG--SNVRSYLYCEDVAEAFECILHK-GEVGHVYNVGTKKERRVIDVAKDICK 267
G DG +N+ Y VA+A + ++HK G G +++ K +RV D+ +
Sbjct: 213 VGPDGGRTNIVPVDY---VADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFAR 265
|
Length = 657 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-04
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 459 RTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAA---HPEGSGIGYKEEDTPNFTGSFY 515
NV GTL L + R HG+ +F AA PE I E+ P + Y
Sbjct: 94 DNNVVGTLNLLEAMRAHGV------KNFVFSSSAAVYGEPETVPI---TEEAPLNPTNPY 144
Query: 516 SKTKAMVEELLKEYDNVCTLRV 537
+TK MVE++L++ L
Sbjct: 145 GRTKLMVEQILRDLAKAPGLNY 166
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 27/243 (11%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+ +TGA GFI S V L+ +++V L + D + L + A +GD+
Sbjct: 3 VFVTGATGFIGSAVVRELVAA--GHEVVGLARSD--AGAAKLEAAGAQV----HRGDLED 54
Query: 69 ADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
D +L + D ++H A + F N + + + L EA + TG +
Sbjct: 55 LD----ILRKAAAEADAVIHLAF----THDFDNFAQACEVDRRAIEALGEALRGTG--KP 104
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
I+ S + G T EA PT A +A +E + +
Sbjct: 105 LIYTSGIWLLGPTGGQEED--EEAPDDPPT---PAARAVSEAAALELAERGVRASVVRLP 159
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
V+G +P I +A GDG N ++ +D A + L KG+ G
Sbjct: 160 PVVHGRGD--HGFVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGS 217
Query: 247 VYN 249
VY+
Sbjct: 218 VYH 220
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 12/82 (14%)
Query: 459 RTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAA---HPEGSGIGYKEEDTPNFTGSFY 515
NV GTL L + G+ IF AA P S I E +P + Y
Sbjct: 92 DNNVVGTLNLIEAMLQTGVKKF------IFSSTAAVYGEPTTSPIS---ETSPLAPINPY 142
Query: 516 SKTKAMVEELLKEYDNVCTLRV 537
++K M EE+L++ +V
Sbjct: 143 GRSKLMSEEILRDAAKANPFKV 164
|
Length = 329 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 504 EEDTPNFTGSFYSKTKAMVEELLKEY--DNVCTLRVRMPISSDLNNPR--NFITKISRYN 559
+ Y + K E++L E +R R F +++R
Sbjct: 118 PDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFFDRLARGR 177
Query: 560 KVVNIPNSMTVLDELLPISIEMAK---------RNLRGIWNFTNPGVVSHNEILEMYKKY 610
++ +P L + + + ++A+ + + GI+N T V+ +E+LE K
Sbjct: 178 PIL-VPGDGHSLVQFIHVK-DLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKA 235
Query: 611 IN--PEFKWVN 619
+ E V
Sbjct: 236 LGKEAEIVHVE 246
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 8e-04
Identities = 51/255 (20%), Positives = 88/255 (34%), Gaps = 46/255 (18%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
I+ITG GFI + RL +++VVL + P KA + + D
Sbjct: 1 KIVITGGTGFIGRALTRRLTAA--GHEVVVLSR----------RPGKAEGLAEVITWDGL 48
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIY-----GTHVLLEAC-KVT 121
S D +++ A + + + K I T VL+EA
Sbjct: 49 SLGPWEL----PGADAVINLAGEPIACRRWTEAN---KKEILSSRIESTRVLVEAIANAP 101
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY------GR 175
+ I S YG + ++ + N + + A + A+
Sbjct: 102 APPKVLISASAVGYYGHSGDEVLTENSPSG-----KDFLAE------VCKAWEKAAQPAS 150
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
G V+ R V GP+ +PK +L GL P+ G G S+++ +D+
Sbjct: 151 ELGTRVVILRTGVVLGPD---GGALPKMLLPFRLGLGGPL-GSGRQWMSWIHIDDLVRLI 206
Query: 236 ECILHKGEVGHVYNV 250
E + ++ N
Sbjct: 207 EFAIENPDLSGPVNA 221
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 9/100 (9%)
Query: 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNY---ATGCIFE 489
+ + A V++ E + D TNV GT + + + L ++ A
Sbjct: 87 DVIIHNAAT-----VNFVEPYS-DLRATNVLGTREVLRLAKQMKKLPFHHVSTAYVNGER 140
Query: 490 YDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529
+ + E + Y+++K + E+L++E
Sbjct: 141 GGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQLVREA 180
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 45/172 (26%), Positives = 66/172 (38%), Gaps = 56/172 (32%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL--------------------------DK 40
K IL+TGA GF+A +++R P K + L +
Sbjct: 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLR 71
Query: 41 LDYCSNLKNLIPSKASSNFKFVKGDIASADL--VNFLLITE---SIDTIMHFAAQTHVD- 94
NL +LI K + V GDI+ DL + L E ID +++ AA T+ D
Sbjct: 72 EKLGENLNSLISEKVTP----VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDE 127
Query: 95 --------NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE 138
N+ G +VL A K +++ +HVST V GE
Sbjct: 128 RYDVALGINTLG-----------ALNVLNFAKKCV-KVKMLLHVSTAYVCGE 167
|
Length = 491 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 45/245 (18%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+LITG G+ + L ++ +++ D L KF++ D+
Sbjct: 2 VLITGGGGYFGFRLGCALAKS--GVHVILFDIRRPQQEL--------PEGIKFIQADVR- 50
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKN-------NIYGTHVLLEACKVT 121
DL +D + H A S+G S N N+ GT +++ C V
Sbjct: 51 -DLSQLEKAVAGVDCVFHIA-------SYGMSGREQLNRELIEEINVRGTENIIQVC-VR 101
Query: 122 GQIRRFIHVSTDEVY--GETDEDAVVGNHEASQLLP----TNPYSATKAGAEMLV----- 170
++ R I+ ST V G+ + E+ LP + YS TK+ AE LV
Sbjct: 102 RRVPRLIYTSTFNVIFGGQPIRNG----DESLPYLPLDLHVDHYSRTKSIAEQLVLKANN 157
Query: 171 MAYGRSYG-LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229
M + G L R +YGP + ++ +P+ + +GL + ++GD ++ +++ +
Sbjct: 158 MPLPNNGGVLRTCALRPAGIYGPGE--QRHLPRIVSYIEKGLFMFVYGDPKSLVEFVHVD 215
Query: 230 DVAEA 234
++ +A
Sbjct: 216 NLVQA 220
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 62/222 (27%), Positives = 83/222 (37%), Gaps = 77/222 (34%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS------NFK 60
+LI G GFI +H+ RL+R Y++ LD I S A S F
Sbjct: 316 TRVLILGVNGFIGNHLTERLLR-DDNYEVYGLD-----------IGSDAISRFLGHPRFH 363
Query: 61 FVKGDIASADLVNFLLITESI-------DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV 113
FV+GDI+ + +E I D ++ A E+T+N + V
Sbjct: 364 FVEGDIS--------IHSEWIEYHIKKCDVVLPLVA-------IATPIEYTRNPL---RV 405
Query: 114 LL----EACKVTGQIR-------RFIHVSTDEVYG-----ETDEDA---VVGNHEASQLL 154
E K+ IR R I ST EVYG DED +VG
Sbjct: 406 FELDFEENLKI---IRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVG-------- 454
Query: 155 PTNP----YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 192
P N YS +K + ++ AYG GL R N GP
Sbjct: 455 PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGP 496
|
Length = 660 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 43/191 (22%), Positives = 56/191 (29%), Gaps = 56/191 (29%)
Query: 384 MKFLIYGRTGWIGG-LLGKLCEKEGI----------PF-EYGKGRLEDCSSLIADVQSVK 431
MK LI G +G++G L +L P G R+ IA +V
Sbjct: 1 MKVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPSGAPRVTQ----IAGDLAVP 56
Query: 432 ----------PTHVFNAAGVTGRPNVDWCESHKTDT---IRTNVAGTLTLADVCRDHGIL 478
P VF+ A + D R NV GT L + R
Sbjct: 57 ALIEALANGRPDVVFHLAAIVSGGAE-------ADFDLGYRVNVDGTRNLLEALRK---- 105
Query: 479 MMNYATGCIFE-----YDAAHPEGSGIGYKEEDTPNFT-GSFYSKTKAMVEELLKEYDN- 531
+F Y P D S Y KAM E LL +Y
Sbjct: 106 -NGPKPRFVFTSSLAVYGLPLPNPV------TDHTALDPASSYGAQKAMCELLLNDYSRR 158
Query: 532 --VCTLRVRMP 540
V +R+P
Sbjct: 159 GFVDGRTLRLP 169
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 31/134 (23%)
Query: 12 TGAAGFIASHVCNRL----------IRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF 61
TGA+GFI S + RL +R+ + K V ++L L A K
Sbjct: 4 TGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKV--------AHLLEL--EGAKERLKL 53
Query: 62 VKGDIASADLVNFLLITESID---TIMHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEA 117
K ADL+++ +ID + H A + VD +S E + + GT +LEA
Sbjct: 54 FK-----ADLLDYGSFDAAIDGCDGVFHVA--SPVDFDSEDPEEEMIEPAVKGTLNVLEA 106
Query: 118 CKVTGQIRRFIHVS 131
C ++R + S
Sbjct: 107 CAKAKSVKRVVFTS 120
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 668 | |||
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 100.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 100.0 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.98 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.98 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.98 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.98 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.97 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.97 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.97 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.97 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.97 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.97 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.97 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.97 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.96 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.96 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.95 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.95 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.95 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.95 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.94 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.94 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.93 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.93 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.93 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.93 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.92 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.92 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.92 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.92 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.92 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.91 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.91 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.91 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.88 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.88 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.88 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.87 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.87 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.87 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.87 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.86 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.85 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.85 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.84 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.84 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.84 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.84 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.83 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.83 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.82 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.82 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.82 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.82 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.82 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.81 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.81 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.81 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.81 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.81 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.81 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.81 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.8 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.8 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.79 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.79 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.78 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.77 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.77 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.77 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.77 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.76 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.76 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.76 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.76 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.75 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.75 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.75 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.75 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.75 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.75 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.75 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.74 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.74 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.74 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.74 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.74 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.73 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.73 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.73 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.72 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.72 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.72 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.72 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.71 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.71 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.7 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.7 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.7 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.7 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.7 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.7 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.7 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.69 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.69 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.69 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.69 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.68 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.68 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.68 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.68 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.68 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.68 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.67 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.67 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.67 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.66 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.66 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.65 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.65 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.65 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.65 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.65 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.65 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.64 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.64 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.64 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.64 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.64 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.63 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.62 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.62 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.62 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.62 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.61 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.61 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.61 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.61 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.61 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.61 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.6 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.6 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.6 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.6 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.6 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.6 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.6 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.59 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.59 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.58 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.58 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.58 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.58 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.57 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.57 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.57 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.56 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.56 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.56 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.56 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.56 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.55 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.55 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.54 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.54 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.54 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.54 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.54 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.53 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.53 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.52 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.52 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.52 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.52 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.51 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.51 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.51 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.51 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.51 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.51 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.51 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.5 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.5 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.5 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.5 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.49 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.49 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.49 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.49 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.48 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.48 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.47 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.47 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.47 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.47 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.47 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.46 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.46 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.46 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.46 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.45 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.45 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.45 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.44 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.44 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.43 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.43 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.43 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.42 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.42 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.41 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.41 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.41 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.4 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.39 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.39 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.39 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.38 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.38 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.38 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.38 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.38 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.37 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.37 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.37 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.37 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.36 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.36 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.35 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.35 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.35 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.35 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.34 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.34 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.34 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.34 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.31 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.31 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.31 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.31 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.31 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.3 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.3 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.3 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.29 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.29 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.29 |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-88 Score=753.85 Aligned_cols=663 Identities=89% Similarity=1.403 Sum_probs=547.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
..+++|+|||||||||||++|++.|++++++++|+++++.........+.......+++++.+|+.|.+.+..++...++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 45678999999999999999999999998789999998753222222222222234789999999999988887755789
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
|+|||+|+....+.++.++.+++++|+.+|.+|+++|++.+.+++|||+||..+||........+..|+.+..|.++|+.
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~ 161 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSA 161 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHH
Confidence 99999999877666666778899999999999999999977689999999999999876544334467777778899999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
+|..+|.+++.+.++++++++++||++||||++.+..+++.++..+..++++.+++++.+.++|+|++|+|+++..++++
T Consensus 162 sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~ 241 (668)
T PLN02260 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241 (668)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc
Confidence 99999999999988889999999999999999877778888888888888888889999999999999999999999988
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHHHHHHHHhh
Q 005949 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 242 ~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
...+++||+++++.+++.|+++.+++.+|.++...+...+.+++....+.+|++|+++|||+|+++++|+|+++++||++
T Consensus 242 ~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~ 321 (668)
T PLN02260 242 GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTS 321 (668)
T ss_pred CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 77788999999999999999999999999865544555556666666778999999999999999999999999999999
Q ss_pred CCCcccccCCCCCCCCcccccCCCCCCCCcccccccccccccccccccccccccCCCCCCCCcEEEEEcCCcchhHHHHH
Q 005949 322 NPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVSTNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIGGLLGK 401 (668)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkvli~G~~G~iG~~l~~ 401 (668)
++.+|++.++++.+||++.++++...++..++..... .+........+.........++||||||||+||||++|++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~mkiLVtGa~G~iG~~l~~ 398 (668)
T PLN02260 322 NPDWWGDVSGALLPHPRMLMMPGVRLFDGSEEIKLSS---SGSQTGLVVVTKPAGSSPGKPSLKFLIYGRTGWIGGLLGK 398 (668)
T ss_pred ChhhhhccccccccCCCcccccccccccchhhhcccc---ccccccccccccccccCCCCCCceEEEECCCchHHHHHHH
Confidence 9999999999999999998888766666555533111 0000000001111123344456899999999999999999
Q ss_pred HHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEE
Q 005949 402 LCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMN 481 (668)
Q Consensus 402 ~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~ 481 (668)
.|.++|++|.+..+|++|.+.+.+.+...+||+|||||++++.+.+++++.++...+++|+.|+.+|+++|++.++++++
T Consensus 399 ~L~~~g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~ 478 (668)
T PLN02260 399 LCEKQGIAYEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMN 478 (668)
T ss_pred HHHhCCCeEEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEE
Confidence 99999999877788999999999999988999999999998655567788899999999999999999999999999999
Q ss_pred EecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccce
Q 005949 482 YATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKV 561 (668)
Q Consensus 482 ~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~ 561 (668)
+||++||++....|.+.+.++.|++.+.++.+.||.||+++|++++.+.+.+++|+++++.+..+++.+|+..+++....
T Consensus 479 ~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~ 558 (668)
T PLN02260 479 FATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKV 558 (668)
T ss_pred EcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhhheEEEEEEecccCCCCccHHHHHHhcccee
Confidence 99999997643222112235777777777779999999999999999988889999999887777888999999988776
Q ss_pred eecCCCcccHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 562 VNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 562 ~~~~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
..++.+..+++|++.+++.++++..+|+||+++++.+|++||++.+++.++....+.++...+.....+..++...||++
T Consensus 559 ~~vp~~~~~~~~~~~~~~~l~~~~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~ 638 (668)
T PLN02260 559 VNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDAS 638 (668)
T ss_pred eccCCCceehhhHHHHHHHHHHhCCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHH
Confidence 66677888999999999999886667999999999999999999999987533224455555433224566666699999
Q ss_pred HHHhhcCCccChHHHHHHHHhccCCC
Q 005949 642 KLKKEFPELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 642 k~~~~~g~~~~~~~~l~~~~~~~~~~ 667 (668)
|+++.++.+++|+++|.+++.+.+++
T Consensus 639 k~~~~~~~~~~~~~~l~~~~~~~~~~ 664 (668)
T PLN02260 639 KLKKEFPELLSIKESLIKYVFEPNKK 664 (668)
T ss_pred HHHHhCccccchHHHHHHHHhhhhhh
Confidence 99998877789999999999988765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-56 Score=410.27 Aligned_cols=323 Identities=44% Similarity=0.784 Sum_probs=301.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|++|||||+||||+++++.++++++.++|+.+|..........+......++..++++|++|.+.+.+++.+.++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999999888899999998887777777666667799999999999999999998789999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||.++++.+-.+|..++++|+.||.+||+++++....-||+++||..|||+-..... ..+|.++.+|.+||++||+.+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~-~FtE~tp~~PsSPYSASKAas 159 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDD-AFTETTPYNPSSPYSASKAAS 159 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCC-CcccCCCCCCCCCcchhhhhH
Confidence 9999999999999999999999999999999999763359999999999999875422 358999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCc
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 246 (668)
+.++++|.+.+|+|++|.|+++-|||.+.+..++|.++.+++.|++++++|+|.+.|+|+||+|-|+|+..+++++..|+
T Consensus 160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE 239 (340)
T COG1088 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGE 239 (340)
T ss_pred HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCc---ceEeccCCCCCCcccccChHHH-HhCCCcccCCHHHHHHHHHHHHhhC
Q 005949 247 VYNVGTKKERRVIDVAKDICKLFSMDPET---SIKFVENRPFNDQRYFLDDQKL-TSLGWSERTIWEEGLRKTIEWYTQN 322 (668)
Q Consensus 247 ~~ni~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~k~-~~lG~~~~~~~~~~l~~~~~~~~~~ 322 (668)
+|||+++...+..|+++.|++.+|...+. .+.+..++|....++.+|.+|+ ++|||.|+.+++++|+++++||.++
T Consensus 240 ~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N 319 (340)
T COG1088 240 TYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDN 319 (340)
T ss_pred eEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999987652 4788999999999999999998 4899999999999999999999999
Q ss_pred CCcccccC
Q 005949 323 PDWWGDVS 330 (668)
Q Consensus 323 ~~~~~~~~ 330 (668)
..||+...
T Consensus 320 ~~Ww~~l~ 327 (340)
T COG1088 320 EWWWEPLK 327 (340)
T ss_pred hHHHhhhh
Confidence 99998753
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-53 Score=381.82 Aligned_cols=321 Identities=71% Similarity=1.148 Sum_probs=300.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
|+.++.++||||||+||||++.++.+....+.++.+.+|.....+.++.+.+....++.+++++|+.+...+...+....
T Consensus 1 ~~~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~ 80 (331)
T KOG0747|consen 1 MATYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEE 80 (331)
T ss_pred CCCCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCc
Confidence 44456689999999999999999999999999999999999888888888777788899999999999999999998889
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|.|||+|+..+++.++.++.++...|+.++..|+++++.+|++++|||+||..|||++...... .|.+.++|.++|+
T Consensus 81 id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~--~E~s~~nPtnpyA 158 (331)
T KOG0747|consen 81 IDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVV--GEASLLNPTNPYA 158 (331)
T ss_pred hhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccc--cccccCCCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999877653 3889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
++|+++|..+++|.++++++++++|.++||||++.+..+++.|+..+..+++.++.++|.+.|+|+|++|+++|+.++.+
T Consensus 159 asKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~ 238 (331)
T KOG0747|consen 159 ASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLE 238 (331)
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEcCCCcccHHHHHHHHHHHhCC-----CCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHHHH
Q 005949 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSM-----DPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKT 315 (668)
Q Consensus 241 ~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~ 315 (668)
++..|++|||++..+.+..|+++.|.+.+.. +.++.+.+.+++|.+..++.++.+|++.|||+|+++|+++|+.+
T Consensus 239 Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrkt 318 (331)
T KOG0747|consen 239 KGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKT 318 (331)
T ss_pred cCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHH
Confidence 9888999999999999999999999988865 34455777899999999999999999999999999999999999
Q ss_pred HHHHhhCC
Q 005949 316 IEWYTQNP 323 (668)
Q Consensus 316 ~~~~~~~~ 323 (668)
++||.++.
T Consensus 319 ie~y~~~~ 326 (331)
T KOG0747|consen 319 IEWYTKNF 326 (331)
T ss_pred HHHHHhhh
Confidence 99998864
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-48 Score=358.86 Aligned_cols=302 Identities=30% Similarity=0.481 Sum_probs=263.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+||||||+||||+|.+..|++. +++|+++|+....... .+. ....+++++|+.|.+.+.++|++.++|.|||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~-~v~----~~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKI-ALL----KLQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHH-Hhh----hccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 58999999999999999999998 8999999987543211 110 0116899999999999999999999999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||...+..+-.+|.++++.|+.||.+|++++++++ +++|||.||+.|||.+...+ .+|+.+..|.||||.||.+.
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~P---I~E~~~~~p~NPYG~sKlm~ 149 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSP---ISETSPLAPINPYGRSKLMS 149 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcc---cCCCCCCCCCCcchhHHHHH
Confidence 999999999999999999999999999999999998 99999999999999998744 48999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCC---------CCCChHHHHHHHHHcCCC-ceeec------CCCceEeceeHHH
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQ---------FPEKLIPKFILLAMRGLP-LPIHG------DGSNVRSYLYCED 230 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~---------~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~v~D 230 (668)
|++++.+++.+++++++||..++.|-.. ..+.+++.+++.+....+ +.+++ ||...|+||||.|
T Consensus 150 E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~D 229 (329)
T COG1087 150 EEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDD 229 (329)
T ss_pred HHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhH
Confidence 9999999999999999999999999532 124688888888876554 56654 6788899999999
Q ss_pred HHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccC
Q 005949 231 VAEAFECILHK---GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERT 306 (668)
Q Consensus 231 ~a~ai~~~~~~---~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~ 306 (668)
+|+|++++++. +....+||+++|+-.|+.|+++.+.+..|.+.+ .+..+.|+.+...++.|.+|++ +|||+|+.
T Consensus 230 LA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip--~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~ 307 (329)
T COG1087 230 LADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP--VEIAPRRAGDPAILVADSSKARQILGWQPTY 307 (329)
T ss_pred HHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCc--eeeCCCCCCCCceeEeCHHHHHHHhCCCccc
Confidence 99999988764 223369999999999999999999999997655 6677899999999999999997 59999998
Q ss_pred -CHHHHHHHHHHHHhh
Q 005949 307 -IWEEGLRKTIEWYTQ 321 (668)
Q Consensus 307 -~~~~~l~~~~~~~~~ 321 (668)
++++.++.++.|...
T Consensus 308 ~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 308 DDLEDIIKDAWDWHQQ 323 (329)
T ss_pred CCHHHHHHHHHHHhhh
Confidence 999999999999983
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=369.42 Aligned_cols=312 Identities=26% Similarity=0.382 Sum_probs=252.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIP---SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
+++|+|||||||||||++|+++|+++ +++|++++|...... ...... .....++.++.+|+.|.+.+..++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~-- 88 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC-- 88 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 45689999999999999999999999 688999988532111 111100 011235789999999999999888
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
.++|+|||+|+.........++...+++|+.||.+++++|++.+ +++|||+||.++||.....+. .|+++..|.++
T Consensus 89 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~---~e~~~~~p~~~ 164 (348)
T PRK15181 89 KNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPK---IEERIGRPLSP 164 (348)
T ss_pred hCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCC---CCCCCCCCCCh
Confidence 57999999999876655667788899999999999999999986 899999999999997543322 45556678889
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
|+.+|.++|.+++.+.++++++++++||++||||++.+. .+++.++..+..++++.++++|.+.|+|+|++|+|++
T Consensus 165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a 244 (348)
T PRK15181 165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA 244 (348)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 999999999999998888899999999999999986443 4788888888888888888999999999999999999
Q ss_pred HHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCC----cceEeccCCCCCCcccccChHHHHh-CCCcccC
Q 005949 235 FECILHKG---EVGHVYNVGTKKERRVIDVAKDICKLFSMDPE----TSIKFVENRPFNDQRYFLDDQKLTS-LGWSERT 306 (668)
Q Consensus 235 i~~~~~~~---~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~ 306 (668)
+++++..+ ..+++||+++++.+|+.|+++.+.+.++.... ..+...+.++.......+|++|+++ |||+|++
T Consensus 245 ~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~ 324 (348)
T PRK15181 245 NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEF 324 (348)
T ss_pred HHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCC
Confidence 98877543 25689999999999999999999999874311 1122223333344456789999975 9999999
Q ss_pred CHHHHHHHHHHHHhhCC
Q 005949 307 IWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 307 ~~~~~l~~~~~~~~~~~ 323 (668)
+++|+|+++++|++.+.
T Consensus 325 sl~egl~~~~~w~~~~~ 341 (348)
T PRK15181 325 DIKEGLKQTLKWYIDKH 341 (348)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 99999999999998763
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-42 Score=385.30 Aligned_cols=495 Identities=19% Similarity=0.174 Sum_probs=334.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCH------HHHHHHhccCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA------DLVNFLLITES 80 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~ 80 (668)
|+|||||||||||++|++.|++...+++|++++|......+..+.......+++++.+|+.|+ +.+.++ .+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---GD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---cC
Confidence 489999999999999999999533378999999854322222211111124689999999984 344443 68
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC---CCCCCCC
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA---SQLLPTN 157 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~---~~~~p~~ 157 (668)
+|+||||||..... .......++|+.++.+++++|++.+ +++|||+||..+||...... +|+ .+..+.+
T Consensus 78 ~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~----~e~~~~~~~~~~~ 149 (657)
T PRK07201 78 IDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVF----REDDFDEGQGLPT 149 (657)
T ss_pred CCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCcc----ccccchhhcCCCC
Confidence 99999999975532 3456788999999999999999976 89999999999998754321 222 2233457
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHc-CCCceeecCCCceEeceeHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMR-GLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~ 229 (668)
+|+.+|..+|.++++ ..+++++++||++||||..... .++..++..... ...+++.+.+...++++|++
T Consensus 150 ~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vd 226 (657)
T PRK07201 150 PYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVD 226 (657)
T ss_pred chHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHH
Confidence 899999999999974 2489999999999999865321 011122222211 12234445566778999999
Q ss_pred HHHHHHHHHHhcCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCC---Ccc-eEec-----cC--------------CC-
Q 005949 230 DVAEAFECILHKGE-VGHVYNVGTKKERRVIDVAKDICKLFSMDP---ETS-IKFV-----EN--------------RP- 284 (668)
Q Consensus 230 D~a~ai~~~~~~~~-~~~~~ni~~~~~~s~~el~~~i~~~~g~~~---~~~-~~~~-----~~--------------~~- 284 (668)
|+++++..+++.+. .+++||+++++++++.|+++.+.+.+|.+. ... +... .. ..
T Consensus 227 dva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (657)
T PRK07201 227 YVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLG 306 (657)
T ss_pred HHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcC
Confidence 99999998887643 578999999999999999999999999865 110 0000 00 00
Q ss_pred -------CCCcccccChHHHHh-C---CCcccCCHHHHHHHHHHHHhhCCCcccccCCCCCCCCcccccCCCCCCCCccc
Q 005949 285 -------FNDQRYFLDDQKLTS-L---GWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEE 353 (668)
Q Consensus 285 -------~~~~~~~~~~~k~~~-l---G~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (668)
.......+|++++++ | |+... .+.+.+...++||.++.+-.. ...+
T Consensus 307 ~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~------~~~~---------------- 363 (657)
T PRK07201 307 IPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHLDPDR------ARRR---------------- 363 (657)
T ss_pred CCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcCChhh------hccc----------------
Confidence 001223556666643 4 33333 466777777776665532100 0000
Q ss_pred ccccccccccccccccccccccCCCCCCCCcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------
Q 005949 354 NKAVSSVSTNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------- 410 (668)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------- 410 (668)
.... .-..++++||||+|+||.++++.|+++|++|
T Consensus 364 ---------------------~~~~-~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~ 421 (657)
T PRK07201 364 ---------------------DLRG-PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT 421 (657)
T ss_pred ---------------------Cccc-CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc
Confidence 0000 0112579999999999999999999999854
Q ss_pred -cccccccCChhHHHHHhhhc-----CCCEEEEcccccCCCCcccc---ccccccceehhhhhhHHHHHHHH----HcCC
Q 005949 411 -EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGRPNVDWC---ESHKTDTIRTNVAGTLTLADVCR----DHGI 477 (668)
Q Consensus 411 -~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~~~~~~~---~~~~~~~~~~Nv~~~~~ll~~~~----~~~~ 477 (668)
.++.+|++|.++++++++.. ++|+|||+||.......... .++....+++|+.|+.++.+++. +.+.
T Consensus 422 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 501 (657)
T PRK07201 422 AHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRF 501 (657)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Confidence 34568999999888887754 68999999996521111111 13456778899999988877763 3443
Q ss_pred -cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHH
Q 005949 478 -LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFIT 553 (668)
Q Consensus 478 -~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~ 553 (668)
+++++||..+|.+. +..+.|+.||...+.++..+.. ..++++..++|+.+..+.. .
T Consensus 502 g~iv~isS~~~~~~~------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~--~ 561 (657)
T PRK07201 502 GHVVNVSSIGVQTNA------------------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMI--A 561 (657)
T ss_pred CEEEEECChhhcCCC------------------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccccc--C
Confidence 78888887766321 1235799999999999887642 3589999999998876531 1
Q ss_pred HhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 554 KISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 554 ~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
.. ... ........+++|+.++..+.+.
T Consensus 562 ~~----~~~-~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 562 PT----KRY-NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred cc----ccc-cCCCCCCHHHHHHHHHHHHHhC
Confidence 00 000 0112456899999999987654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=355.61 Aligned_cols=319 Identities=43% Similarity=0.753 Sum_probs=254.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
|++|||||||||||+++++.|+++|+. .++++++.........+.......+++++.+|++|.+.+.+++...++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSD-AVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCC-EEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEE
Confidence 468999999999999999999999532 2444555322111111111111235788999999999999998655799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc--------CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCC
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT--------GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 157 (668)
|+||.........++...+++|+.|+.+++++|++. ..+++||++||.++||...... ...+|+.+..|.+
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~-~~~~E~~~~~p~s 158 (355)
T PRK10217 80 HLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTD-DFFTETTPYAPSS 158 (355)
T ss_pred ECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCC-CCcCCCCCCCCCC
Confidence 999987655455677889999999999999999863 2367999999999998643211 1236777778889
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
.|+.+|..+|.+++.++++++++++++||++||||+..+..+++.++..+..++++.+++++.++++|+|++|+++++..
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~ 238 (355)
T PRK10217 159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYC 238 (355)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHH
Confidence 99999999999999998888999999999999999987667888888888888888888999999999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc----------ceEeccCCCCCCcccccChHHHH-hCCCcccC
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPET----------SIKFVENRPFNDQRYFLDDQKLT-SLGWSERT 306 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~ 306 (668)
+++.+..+++||+++++++|+.|+++.+++.++..... .+...+.++.....+.+|++|++ +|||+|++
T Consensus 239 ~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~ 318 (355)
T PRK10217 239 VATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQE 318 (355)
T ss_pred HHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcC
Confidence 99877677899999999999999999999998753210 12222333434455688999996 59999999
Q ss_pred CHHHHHHHHHHHHhhCCCcc
Q 005949 307 IWEEGLRKTIEWYTQNPDWW 326 (668)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~ 326 (668)
+++|+|+++++|++.+..+|
T Consensus 319 ~l~e~l~~~~~~~~~~~~~~ 338 (355)
T PRK10217 319 TFESGMRKTVQWYLANESWW 338 (355)
T ss_pred cHHHHHHHHHHHHHhCHHHH
Confidence 99999999999999987655
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=351.94 Aligned_cols=314 Identities=21% Similarity=0.280 Sum_probs=241.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-----ccccCC------------CcCCCCeEEEEccC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIP------------SKASSNFKFVKGDI 66 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~~~------------~~~~~~~~~~~~Dl 66 (668)
.++|+||||||+||||++|+++|+++ +++|+++|+...... ...+.. .....+++++.+|+
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 45789999999999999999999999 678888875321110 000000 00123588999999
Q ss_pred CCHHHHHHHhccCCCCEEEEcCccCCcccccCCh---HHHHHHHHHHHHHHHHHHHHcCCCc-EEEEEcCccccCCCCCC
Q 005949 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNS---FEFTKNNIYGTHVLLEACKVTGQIR-RFIHVSTDEVYGETDED 142 (668)
Q Consensus 67 ~d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~---~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~vyg~~~~~ 142 (668)
+|.+.+.+++...++|+|||+|+......+..++ ...+++|+.|+.+++++|++.+ ++ +||++||..+||....+
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~ 201 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNID 201 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCC
Confidence 9999999999766899999999875543333333 4567899999999999999987 64 99999999999975321
Q ss_pred cCCC---CC----CC---CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---------------
Q 005949 143 AVVG---NH----EA---SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--------------- 197 (668)
Q Consensus 143 ~~~~---~~----e~---~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--------------- 197 (668)
.... .+ |+ .+..|.++|+.+|.++|.+++.++++++++++++||++||||++...
T Consensus 202 ~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~ 281 (442)
T PLN02572 202 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGV 281 (442)
T ss_pred CcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccc
Confidence 1100 11 22 35677889999999999999999988999999999999999986431
Q ss_pred --ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-CC--ceEEEcCCCcccHHHHHHHHHHH---h
Q 005949 198 --KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-VG--HVYNVGTKKERRVIDVAKDICKL---F 269 (668)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~--~~~ni~~~~~~s~~el~~~i~~~---~ 269 (668)
..++.++..+..++++.++++|.++|+|+||+|++++++.+++++. .+ .+||+++ ..+|+.|+++.+.+. +
T Consensus 282 ~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~ 360 (442)
T PLN02572 282 FGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKL 360 (442)
T ss_pred hhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhh
Confidence 3566677777788888888999999999999999999999998642 33 4899986 679999999999999 8
Q ss_pred CCCCCcceEecc--CCCCCCcccccChHHHHhCCCcccC---CHHHHHHHHHHHHhhCC
Q 005949 270 SMDPETSIKFVE--NRPFNDQRYFLDDQKLTSLGWSERT---IWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 270 g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~lG~~~~~---~~~~~l~~~~~~~~~~~ 323 (668)
|.+.. +...+ ...........|.+|+++|||+|++ ++.+++.++++||+++.
T Consensus 361 g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~~ 417 (442)
T PLN02572 361 GLDVE--VISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDRV 417 (442)
T ss_pred CCCCC--eeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhhc
Confidence 86543 22222 1222223456789999999999998 89999999999999765
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=316.99 Aligned_cols=270 Identities=19% Similarity=0.173 Sum_probs=232.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--------------------------cccccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--------------------------PFEYGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--------------------------~v~~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
|++|||||.||||++++++++++.. ++.++++|++|.+.+.++++..++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 6899999999999999999999874 24688999999999999999999999999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
+||.+ +|+.+...|..++++|+.||.+||++++++.. +++|+||..|||.-... .+..+|.+|..|.|+|
T Consensus 81 fAAES---HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~-----~~~FtE~tp~~PsSPY 152 (340)
T COG1088 81 FAAES---HVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD-----DDAFTETTPYNPSSPY 152 (340)
T ss_pred echhc---cccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC-----CCCcccCCCCCCCCCc
Confidence 99999 79999999999999999999999999999974 89999999999976542 1246777888999999
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHH--------hhcccceeecCC-----CcccHhhHHHHHHHHH
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITK--------ISRYNKVVNIPN-----SMTVLDELLPISIEMA 582 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~--------~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~ 582 (668)
+.||+.+..++++|.+.+|+++++.|++|.|||++|..+ ++.+.+.+..++ +++||+|-|+++..++
T Consensus 153 SASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl 232 (340)
T COG1088 153 SASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVL 232 (340)
T ss_pred chhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHH
Confidence 999999999999999999999999999999999965443 456666666554 9999999999999999
Q ss_pred hcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCC----CccChhHHHhhcC--CccChHH
Q 005949 583 KRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSN----NEMDASKLKKEFP--ELLSIKD 655 (668)
Q Consensus 583 ~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~ld~~k~~~~~g--~~~~~~~ 655 (668)
.+. .+++|||+++...+.-|+++.|++.+|+..+- -........+|++ ..+|.+|+++.+| +..+|++
T Consensus 233 ~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~-----~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~ 307 (340)
T COG1088 233 TKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPD-----YRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFET 307 (340)
T ss_pred hcCcCCceEEeCCCccchHHHHHHHHHHHhCccccc-----hhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHH
Confidence 987 77899999999999999999999999987651 0011123445553 3789999888777 6789999
Q ss_pred HHHHHHhccCC
Q 005949 656 SLIKYVFEPNK 666 (668)
Q Consensus 656 ~l~~~~~~~~~ 666 (668)
||+++++|+..
T Consensus 308 GlrkTv~WY~~ 318 (340)
T COG1088 308 GLRKTVDWYLD 318 (340)
T ss_pred HHHHHHHHHHh
Confidence 99999999864
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=347.92 Aligned_cols=300 Identities=26% Similarity=0.421 Sum_probs=243.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
.|||||||||||||++|++.|+++ +++|++++|.... ............+++++.+|+.+.. + .++|+||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~-~~~~~~~~~~~~~~~~~~~Di~~~~-----~--~~~D~Vi 189 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTG-RKENLVHLFGNPRFELIRHDVVEPI-----L--LEVDQIY 189 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCc-cHhHhhhhccCCceEEEECcccccc-----c--cCCCEEE
Confidence 479999999999999999999999 6889998875321 1111111111246788899987653 3 4799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC-----CCCCCCChhH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA-----SQLLPTNPYS 160 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~~Y~ 160 (668)
|+|+.........++.+.++.|+.|+.+|+++|++.+ .+||++||.+|||.....+. +|+ .+..|.+.|+
T Consensus 190 HlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~---~E~~~~~~~p~~p~s~Yg 264 (436)
T PLN02166 190 HLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHPQ---KETYWGNVNPIGERSCYD 264 (436)
T ss_pred ECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCCC---CccccccCCCCCCCCchH
Confidence 9999765444445778899999999999999999987 48999999999997654332 333 3556778899
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 238 (668)
.+|..+|++++.+.++++++++++||++||||+... ..+++.++..+.+++++.+++++.++|+|+|++|+++++..+
T Consensus 265 ~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~ 344 (436)
T PLN02166 265 EGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVAL 344 (436)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHH
Confidence 999999999999988889999999999999998632 357788888888888888889999999999999999999999
Q ss_pred HhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCCHHHHHHHHHH
Q 005949 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIE 317 (668)
Q Consensus 239 ~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~ 317 (668)
++.. .+++||+++++.+|+.|+++.|.+.+|.+.. +.+.+.++.......+|++|+++ |||+|+++++++|+++++
T Consensus 345 ~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~--i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~ 421 (436)
T PLN02166 345 MEGE-HVGPFNLGNPGEFTMLELAEVVKETIDSSAT--IEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVS 421 (436)
T ss_pred HhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCC--eeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 8865 3569999999999999999999999987543 44444444444556789999985 899999999999999999
Q ss_pred HHhhCC
Q 005949 318 WYTQNP 323 (668)
Q Consensus 318 ~~~~~~ 323 (668)
|++.+.
T Consensus 422 ~~~~~~ 427 (436)
T PLN02166 422 DFRNRI 427 (436)
T ss_pred HHHHHh
Confidence 998754
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=306.88 Aligned_cols=304 Identities=31% Similarity=0.464 Sum_probs=259.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.++||+||||+||||+||++.|..+ +++|+++|.... ...+.+.......+++.+.-|+..+ ++ ..+|.|
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~hdv~~p-----l~--~evD~I 95 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFT-GRKENLEHWIGHPNFELIRHDVVEP-----LL--KEVDQI 95 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccc-cchhhcchhccCcceeEEEeechhH-----HH--HHhhhh
Confidence 3579999999999999999999999 699999998643 3344444444566788888888776 33 568999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC--CCCCCCChhHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA--SQLLPTNPYSAT 162 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~--~~~~p~~~Y~~s 162 (668)
+|+|+..+...-..++...+..|+.|+.+++-.|++.+ +||+++||+.|||++...+..+..+. .+..|...|...
T Consensus 96 yhLAapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydeg 173 (350)
T KOG1429|consen 96 YHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEG 173 (350)
T ss_pred hhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHH
Confidence 99999887655556788899999999999999999977 89999999999999776654332222 445577889999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC--CCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
|..+|.++.+|.++.|+.+.|.|+.++|||.+ .+.+.++.|+.++++++++.++++|.|+|+|.+|+|+.++++.+++
T Consensus 174 Kr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~ 253 (350)
T KOG1429|consen 174 KRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLME 253 (350)
T ss_pred HHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhc
Confidence 99999999999999999999999999999987 4468899999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCCHHHHHHHHHHHH
Q 005949 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319 (668)
Q Consensus 241 ~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~ 319 (668)
.+.. +.+|++++..+|+.|+++++.+..+-.. .+.+....+...+...-|++++++ |||.|+++++|+|..++.|+
T Consensus 254 s~~~-~pvNiGnp~e~Tm~elAemv~~~~~~~s--~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~f 330 (350)
T KOG1429|consen 254 SDYR-GPVNIGNPGEFTMLELAEMVKELIGPVS--EIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYF 330 (350)
T ss_pred CCCc-CCcccCCccceeHHHHHHHHHHHcCCCc--ceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHH
Confidence 8754 4699999999999999999999986543 366667777777888899999985 99999999999999999999
Q ss_pred hhCC
Q 005949 320 TQNP 323 (668)
Q Consensus 320 ~~~~ 323 (668)
+++.
T Consensus 331 r~~i 334 (350)
T KOG1429|consen 331 RERI 334 (350)
T ss_pred HHHH
Confidence 9864
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=344.49 Aligned_cols=317 Identities=41% Similarity=0.710 Sum_probs=251.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||++|++.|+++|+ ..|+.+++.........+.......+++++.+|++|.+.+.+++...++|+|||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 4899999999999999999999853 246566653221111111111112357889999999999999986667999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc--------CCCcEEEEEcCccccCCCCCCc-------CCCCCCCC
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT--------GQIRRFIHVSTDEVYGETDEDA-------VVGNHEAS 151 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~v~~SS~~vyg~~~~~~-------~~~~~e~~ 151 (668)
+||.........++...+++|+.|+.+++++|++. +.+++||++||.++||...... ....+|+.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 99986544445667889999999999999999864 2357999999999998642110 01136777
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+..|.+.|+.+|..+|.+++.++++++++++++|+++||||+..+..+++.++..+..++.+.+++++.+.++|+|++|+
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence 78889999999999999999998888999999999999999976667888888888888888888899999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc------ceEeccCCCCCCcccccChHHHHh-CCCcc
Q 005949 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPET------SIKFVENRPFNDQRYFLDDQKLTS-LGWSE 304 (668)
Q Consensus 232 a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~ 304 (668)
++++..+++++..+++||++++++.++.|+++.+++.+|...+. .+...+.++.....+.+|++|+++ |||+|
T Consensus 240 a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 319 (352)
T PRK10084 240 ARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKP 319 (352)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHHcCCCC
Confidence 99999999876667899999999999999999999999853221 122222334344556789999975 99999
Q ss_pred cCCHHHHHHHHHHHHhhCCC
Q 005949 305 RTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~~ 324 (668)
+++++++|+++++|++++.+
T Consensus 320 ~~~l~~~l~~~~~~~~~~~~ 339 (352)
T PRK10084 320 QETFESGIRKTVEWYLANTE 339 (352)
T ss_pred cCCHHHHHHHHHHHHHhCHH
Confidence 99999999999999999753
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=314.74 Aligned_cols=266 Identities=19% Similarity=0.175 Sum_probs=220.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
|+||||||+||||+|.+.+|++.||+| .++.+|+.|.+.+.+.|++.+||+|||+||..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~-- 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI-- 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc--
Confidence 689999999999999999999999853 57789999999999999999999999999999
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecc-eeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATG-CIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
.|..+..+|..+|+.|+.||.+|+++|++++++.++|||+ .|||.+...| +.|+.|..|.|+||+||++.|
T Consensus 79 -~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P-------I~E~~~~~p~NPYG~sKlm~E 150 (329)
T COG1087 79 -SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP-------ISETSPLAPINPYGRSKLMSE 150 (329)
T ss_pred -ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc-------cCCCCCCCCCCcchhHHHHHH
Confidence 7899999999999999999999999999999966666555 7888887777 777788889999999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh-------------hHHHHhh---ccc-c-eeecCC-----------CcccHhhH
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR-------------NFITKIS---RYN-K-VVNIPN-----------SMTVLDEL 574 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~-------------~~~~~~~---~~~-~-~~~~~~-----------~~~~v~D~ 574 (668)
++++.+.+.++++++++|.+|+-|.. +++..++ .++ + ...+++ |+|||.|+
T Consensus 151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL 230 (329)
T COG1087 151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL 230 (329)
T ss_pred HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence 99999998899999999999998774 3443332 222 2 222222 89999999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-- 648 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-- 648 (668)
|++++.+++.- ...+||+++|+..|..|+++.+++++|.++++...+ .++.+.+....|++|+++.+|
T Consensus 231 A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~------RR~GDpa~l~Ad~~kA~~~Lgw~ 304 (329)
T COG1087 231 ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAP------RRAGDPAILVADSSKARQILGWQ 304 (329)
T ss_pred HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCC------CCCCCCceeEeCHHHHHHHhCCC
Confidence 99999998742 345999999999999999999999999887643322 334555566889999999988
Q ss_pred Cc-cChHHHHHHHHhccC
Q 005949 649 EL-LSIKDSLIKYVFEPN 665 (668)
Q Consensus 649 ~~-~~~~~~l~~~~~~~~ 665 (668)
+. .++++-+++.-.|..
T Consensus 305 p~~~~L~~ii~~aw~W~~ 322 (329)
T COG1087 305 PTYDDLEDIIKDAWDWHQ 322 (329)
T ss_pred cccCCHHHHHHHHHHHhh
Confidence 23 367777777666654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=342.40 Aligned_cols=301 Identities=26% Similarity=0.414 Sum_probs=242.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
+.|||||||||||||++|+++|+++ +++|+++++.... ............+++++.+|+.+.. + .++|+|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~-~~~~~~~~~~~~~~~~i~~D~~~~~-----l--~~~D~V 187 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTG-RKENVMHHFSNPNFELIRHDVVEPI-----L--LEVDQI 187 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCcc-chhhhhhhccCCceEEEECCccChh-----h--cCCCEE
Confidence 3589999999999999999999999 6788888764211 1111111112346888999997763 2 469999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC-----CCCCCCChh
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA-----SQLLPTNPY 159 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~~Y 159 (668)
||+|+.........++.+.+++|+.++.+|+++|++.+ + +||++||..+||.....+. +|+ .+..+.+.|
T Consensus 188 iHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~---~E~~~~~~~P~~~~s~Y 262 (442)
T PLN02206 188 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQ---VETYWGNVNPIGVRSCY 262 (442)
T ss_pred EEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCC---CccccccCCCCCccchH
Confidence 99999765444445788899999999999999999987 4 8999999999987654332 232 244456789
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--PEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
+.+|..+|.+++.+.++++++++++||+++|||+.. ...+++.++..+..++++.+++++.++|+|+|++|++++++.
T Consensus 263 ~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~ 342 (442)
T PLN02206 263 DEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR 342 (442)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHH
Confidence 999999999999998888999999999999999853 335677888888888888888999999999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHH
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTI 316 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~ 316 (668)
++++. .+++||+++++++|+.|+++.+.+.+|.+.. +.+.+.+........+|++|++ +|||+|+++++|+|++++
T Consensus 343 a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~--i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~ 419 (442)
T PLN02206 343 LMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAK--IEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMV 419 (442)
T ss_pred HHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCc--eeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 98865 4569999999999999999999999986543 4444444444455678999997 599999999999999999
Q ss_pred HHHhhCC
Q 005949 317 EWYTQNP 323 (668)
Q Consensus 317 ~~~~~~~ 323 (668)
+|+++..
T Consensus 420 ~~~~~~~ 426 (442)
T PLN02206 420 KDFRQRV 426 (442)
T ss_pred HHHHHhh
Confidence 9998755
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=337.31 Aligned_cols=309 Identities=22% Similarity=0.273 Sum_probs=242.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc---CCccccCC---CcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC---SNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~---~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
|+||||||+||||++|+++|+++ +++|++++|.... ..+..+.. .....+++++.+|++|.+.+.+++...+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 58999999999999999999999 6889988886421 11111110 0012358899999999999999997667
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCC--CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
+|+|||+|+.........++...+++|+.|+.+++++|++.+. ..+|||+||.++||..... +.+|+.+..|.++
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~---~~~E~~~~~p~~~ 155 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI---PQNETTPFYPRSP 155 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC---CCCCCCCCCCCCh
Confidence 8999999998765445556677888999999999999998761 2389999999999975432 2467778889999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCC-ceeecCCCceEeceeHHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a 234 (668)
|+.+|..+|.+++.+++++++++++.|+.++|||+.... ..+..++..+..++. ..++++|.+.++|+||+|++++
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a 235 (343)
T TIGR01472 156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA 235 (343)
T ss_pred hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence 999999999999999888899999999999999974322 334455555666654 3456889999999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc-----------------ceEec--cCCCCCCcccccChH
Q 005949 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPET-----------------SIKFV--ENRPFNDQRYFLDDQ 295 (668)
Q Consensus 235 i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~-----------------~~~~~--~~~~~~~~~~~~~~~ 295 (668)
++.+++++. ++.||+++++++|+.|+++.+.+.+|.+... .+.+. ..++........|++
T Consensus 236 ~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 314 (343)
T TIGR01472 236 MWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDAT 314 (343)
T ss_pred HHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHH
Confidence 999998764 4689999999999999999999999965321 11111 123444455678999
Q ss_pred HHH-hCCCcccCCHHHHHHHHHHHHhh
Q 005949 296 KLT-SLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 296 k~~-~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
|++ +|||+|+++++|+|+++++|+++
T Consensus 315 k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 315 KAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 997 59999999999999999998874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=315.11 Aligned_cols=311 Identities=23% Similarity=0.239 Sum_probs=235.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC----ccccCCCcCCCCeEEEEccCCCHHHHHHHh
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN----LKNLIPSKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|..+++++|+||||+||||+||++.||++ ||+|.+..|...... +..+ +...++++.+.+|+.|++++..++
T Consensus 1 m~~~~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l--~~a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 1 MDQDEGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKL--EGAKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCCCCCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhc--ccCcccceEEeccccccchHHHHH
Confidence 66667789999999999999999999999 555655555433211 2222 234556999999999999999999
Q ss_pred ccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCC--CCCcCCCCCCCCCCC
Q 005949 77 ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET--DEDAVVGNHEASQLL 154 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~--~~~~~~~~~e~~~~~ 154 (668)
.+||+|||+|.+...+... ...+.+++.|.||.|++++|++..+|+|+|++||.++...+ ........+|.++.+
T Consensus 77 --~gcdgVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd 153 (327)
T KOG1502|consen 77 --DGCDGVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSD 153 (327)
T ss_pred --hCCCEEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCc
Confidence 8899999999998765432 44589999999999999999998889999999996665433 223333445555433
Q ss_pred C------CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 155 P------TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 155 p------~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+ ..+|..+|..+|+++++++++.+++.+++.|+.|+||...+. +....+....++|..-.. ...+..|||
T Consensus 154 ~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~---~n~~~~~Vd 230 (327)
T KOG1502|consen 154 LDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY---PNFWLAFVD 230 (327)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC---CCCceeeEe
Confidence 3 258999999999999999999999999999999999998763 233344555556643222 224456999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCC
Q 005949 228 CEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTI 307 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~ 307 (668)
|+|+|.|++.+++++.++++|.+.+. ..++.|+++++.+.++..+-. ...............++++|+++||+....+
T Consensus 231 VrDVA~AHv~a~E~~~a~GRyic~~~-~~~~~ei~~~l~~~~P~~~ip-~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~~ 308 (327)
T KOG1502|consen 231 VRDVALAHVLALEKPSAKGRYICVGE-VVSIKEIADILRELFPDYPIP-KKNAEEHEGFLTSFKVSSEKLKSLGGFKFRP 308 (327)
T ss_pred HHHHHHHHHHHHcCcccCceEEEecC-cccHHHHHHHHHHhCCCCCCC-CCCCccccccccccccccHHHHhcccceecC
Confidence 99999999999999999999999954 466999999999998754411 1111111222233468999999999555569
Q ss_pred HHHHHHHHHHHHhhCC
Q 005949 308 WEEGLRKTIEWYTQNP 323 (668)
Q Consensus 308 ~~~~l~~~~~~~~~~~ 323 (668)
++|.+.++++++++..
T Consensus 309 l~e~~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 309 LEETLSDTVESLREKG 324 (327)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 9999999999998753
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=333.16 Aligned_cols=316 Identities=45% Similarity=0.804 Sum_probs=257.1
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
+|||||||||||++++++|+++++.++|+++++.........+.......+++++.+|+.|++.+.++++..++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 59999999999999999999986568999988643211111111111123688899999999999999865569999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 167 (668)
|+......+..++...+++|+.++.+++++|++.+...++|++||..+||...... ..+|..+..|.+.|+.+|..+|
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~--~~~e~~~~~~~~~Y~~sK~~~e 158 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD--AFTETTPLAPSSPYSASKAASD 158 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC--CcCCCCCCCCCCchHHHHHHHH
Confidence 99876555556777889999999999999999864224899999999999765432 2366677778889999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCce
Q 005949 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV 247 (668)
Q Consensus 168 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~ 247 (668)
.+++.++.+.+++++++||+.+|||...+..+++.++..+..++++++++++.+.++|+|++|+++++..++++...+++
T Consensus 159 ~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 238 (317)
T TIGR01181 159 HLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGET 238 (317)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCce
Confidence 99999888889999999999999998766778888888888888888888899999999999999999999987767789
Q ss_pred EEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHhhCCCcc
Q 005949 248 YNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWW 326 (668)
Q Consensus 248 ~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~~~~ 326 (668)
||++++.++++.|+++.+.+.+|.++. .+......+.....+.+|++|++ .|||+|+++++++++++++||+++..+|
T Consensus 239 ~~~~~~~~~s~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~ 317 (317)
T TIGR01181 239 YNIGGGNERTNLEVVETILELLGKDED-LITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEWWW 317 (317)
T ss_pred EEeCCCCceeHHHHHHHHHHHhCCCcc-cccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999997543 22222233333344568999996 5999999999999999999999887665
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=338.05 Aligned_cols=305 Identities=23% Similarity=0.402 Sum_probs=240.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCC-CHHHHHHHhccCCCCEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA-SADLVNFLLITESIDTI 84 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~d~V 84 (668)
||+|||||||||||++|++.|++++ +++|++++|... ....+ ....+++++.+|+. +.+.+.+++ .++|+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~r~~~--~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~--~~~d~V 72 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMDMQTD--RLGDL---VNHPRMHFFEGDITINKEWIEYHV--KKCDVI 72 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEeCcHH--HHHHh---ccCCCeEEEeCCCCCCHHHHHHHH--cCCCEE
Confidence 3689999999999999999999863 588999987532 11111 11246899999997 777787777 579999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC-CC------CCCCC
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA-SQ------LLPTN 157 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-~~------~~p~~ 157 (668)
||+|+.........++...+++|+.++.+++++|++.+ ++|||+||..+||.....+. +|+ .+ .+|.+
T Consensus 73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~---~ee~~~~~~~~~~~p~~ 147 (347)
T PRK11908 73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF---DPEASPLVYGPINKPRW 147 (347)
T ss_pred EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc---CccccccccCcCCCccc
Confidence 99999866544567788899999999999999999876 69999999999997543322 222 11 24667
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC--------CCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--------PEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
+|+.+|.++|++++.++.+++++++++||+++|||+.. ..++++.++..+..++++.+.++|.++|+|+|++
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~ 227 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDID 227 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHH
Confidence 89999999999999998888999999999999999752 2357788888888888888888889999999999
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCC-CcccHHHHHHHHHHHhCCCCCcc-----eEecc--C------CCCCCccccc
Q 005949 230 DVAEAFECILHKG---EVGHVYNVGTK-KERRVIDVAKDICKLFSMDPETS-----IKFVE--N------RPFNDQRYFL 292 (668)
Q Consensus 230 D~a~ai~~~~~~~---~~~~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~-----~~~~~--~------~~~~~~~~~~ 292 (668)
|+++++..+++++ ..+++||++++ ..+|+.|+++.|.+.++..+... +.+.. . ..........
T Consensus 228 D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (347)
T PRK11908 228 DGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVP 307 (347)
T ss_pred HHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccC
Confidence 9999999999875 34789999986 57999999999999998654321 11110 0 0011234556
Q ss_pred ChHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 293 DDQKLT-SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 293 ~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
|.+|++ .|||+|+++++++++++++|+++..
T Consensus 308 d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~ 339 (347)
T PRK11908 308 KIDNTMQELGWAPKTTMDDALRRIFEAYRGHV 339 (347)
T ss_pred ChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 888887 5999999999999999999998654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=341.89 Aligned_cols=311 Identities=24% Similarity=0.350 Sum_probs=237.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
+.|+|||||||||||++|++.|++++ +++|++++|.... ...+... ....+++++.+|+.|.+.+.+++ .++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~~--~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~--~~~ 87 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYNDK--IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI--KMA 87 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCchh--hhhhhccccccCCCCeEEEEcCCCChHHHHHHh--hcC
Confidence 45799999999999999999999984 4788888875321 1111111 11246899999999999999988 579
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCC------------CCC
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVG------------NHE 149 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~------------~~e 149 (668)
|+|||+|+.........++.+.+..|+.++.+++++|++.+ ++|||+||..+||........+ ..|
T Consensus 88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e 165 (386)
T PLN02427 88 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKE 165 (386)
T ss_pred CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCcccccccccccccccc
Confidence 99999999765433345566777899999999999999865 7999999999999753211100 011
Q ss_pred CCC-------CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-----------CChHHHHHHHHHcCC
Q 005949 150 ASQ-------LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----------EKLIPKFILLAMRGL 211 (668)
Q Consensus 150 ~~~-------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~-----------~~~~~~~~~~~~~~~ 211 (668)
+.. ..|.+.|+.+|..+|++++.++++++++++++||++||||+... ..+++.++..+..++
T Consensus 166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 245 (386)
T PLN02427 166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRE 245 (386)
T ss_pred cccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCC
Confidence 111 12446799999999999999888889999999999999997521 235666667777888
Q ss_pred CceeecCCCceEeceeHHHHHHHHHHHHhcCC--CCceEEEcCC-CcccHHHHHHHHHHHhCCCCCcc---eE--eccCC
Q 005949 212 PLPIHGDGSNVRSYLYCEDVAEAFECILHKGE--VGHVYNVGTK-KERRVIDVAKDICKLFSMDPETS---IK--FVENR 283 (668)
Q Consensus 212 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~---~~--~~~~~ 283 (668)
++.+.+++.+.++|+|++|+|++++.+++++. .+++||++++ +.+|+.|+++.+.+.+|...... .. ..+..
T Consensus 246 ~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~ 325 (386)
T PLN02427 246 PLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSK 325 (386)
T ss_pred CeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcc
Confidence 88888888999999999999999999998753 4679999987 58999999999999998521100 00 01111
Q ss_pred ------CCCCcccccChHHHHh-CCCcccCCHHHHHHHHHHHHhhC
Q 005949 284 ------PFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQN 322 (668)
Q Consensus 284 ------~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~~~~ 322 (668)
.........|.+|+++ |||+|+++++++|+++++|++..
T Consensus 326 ~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~ 371 (386)
T PLN02427 326 EFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT 371 (386)
T ss_pred cccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence 1123456779999975 99999999999999999998864
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=336.07 Aligned_cols=313 Identities=24% Similarity=0.366 Sum_probs=248.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++|+||||||+||||+++++.|+++ +++|++++|........ ........+++++.+|++|.+.+.+++...++|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNL-FELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEI 78 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhH-HHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence 46789999999999999999999999 67888888764321100 0000112357789999999999999997667999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+||......+..++...+++|+.++.++++++++.+.+++||++||..+|+..... .+.+|+.+..|.++|+.+|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~--~~~~e~~~~~p~~~Y~~sK 156 (349)
T TIGR02622 79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWV--WGYRETDPLGGHDPYSSSK 156 (349)
T ss_pred EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCC--CCCccCCCCCCCCcchhHH
Confidence 99999976655566778889999999999999999886547899999999999875322 1236667778889999999
Q ss_pred HHHHHHHHHHHHhc-------CCCEEEEeeCceeCCCCC-CCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 164 AGAEMLVMAYGRSY-------GLPVITTRGNNVYGPNQF-PEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 164 ~~~E~~~~~~~~~~-------~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
.++|.+++.+++++ +++++++||++||||++. ..++++.+++.+..++.+.+ +++.++|+|+|++|+++++
T Consensus 157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~ 235 (349)
T TIGR02622 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGY 235 (349)
T ss_pred HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHH
Confidence 99999999887654 899999999999999863 34788899999988887765 6789999999999999999
Q ss_pred HHHHhcC-----CCCceEEEcCC--CcccHHHHHHHHHHHhCCCCCcceEe--ccCCCCCCcccccChHHHHh-CCCccc
Q 005949 236 ECILHKG-----EVGHVYNVGTK--KERRVIDVAKDICKLFSMDPETSIKF--VENRPFNDQRYFLDDQKLTS-LGWSER 305 (668)
Q Consensus 236 ~~~~~~~-----~~~~~~ni~~~--~~~s~~el~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~-lG~~~~ 305 (668)
+.++++. ..+++||++++ ++.++.|+++.+.+.++..+ ..+.. .+.++.......+|++|+++ |||+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~ 314 (349)
T TIGR02622 236 LLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDD-AEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPR 314 (349)
T ss_pred HHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCC-CceeeccCCCCCcccceeecCHHHHHHHhCCCCC
Confidence 9887642 23579999975 68999999999998876422 12222 11233333456789999975 999999
Q ss_pred CCHHHHHHHHHHHHhhCC
Q 005949 306 TIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 306 ~~~~~~l~~~~~~~~~~~ 323 (668)
++++++|+++++|+++..
T Consensus 315 ~~l~~gi~~~i~w~~~~~ 332 (349)
T TIGR02622 315 WGLEEAVSRTVDWYKAWL 332 (349)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999998764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=333.22 Aligned_cols=311 Identities=21% Similarity=0.275 Sum_probs=247.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc---CCccccCC--CcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC---SNLKNLIP--SKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~---~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
++|+||||||+||||+++++.|+++ +++|++++|.... ..+..+.. .....+++++.+|++|.+.+.+++...
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 4689999999999999999999999 6889888875421 11111110 011235889999999999999998766
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCc-----EEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-----RFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
++|+|||+|+.........++...+++|+.|+.++++++++.+ ++ +||++||.++||.... +.+|+.+..
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~----~~~E~~~~~ 157 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPP----PQSETTPFH 157 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCC----CCCCCCCCC
Confidence 7999999999866544556677788999999999999999876 43 8999999999998653 236777888
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCCcee-ecCCCceEeceeHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMRGLPLPI-HGDGSNVRSYLYCED 230 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D 230 (668)
|.++|+.+|.++|.+++.++++++++++..|+.++|||+.... ..+..++..+..+....+ .+++.+.|+|+|++|
T Consensus 158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D 237 (340)
T PLN02653 158 PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD 237 (340)
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence 9999999999999999999988899999999999999975432 234444555666765544 488999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEecc--CCCCCCcccccChHHHH-hCCCcccCC
Q 005949 231 VAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVE--NRPFNDQRYFLDDQKLT-SLGWSERTI 307 (668)
Q Consensus 231 ~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~-~lG~~~~~~ 307 (668)
+++|++.++++.. ++.||+++++++|+.|+++.+.+.+|.+....+.+.. .++.......+|++|++ +|||+|+++
T Consensus 238 ~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~ 316 (340)
T PLN02653 238 YVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVG 316 (340)
T ss_pred HHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCC
Confidence 9999999998754 5789999999999999999999999864222222222 23444556678999997 599999999
Q ss_pred HHHHHHHHHHHHhhCC
Q 005949 308 WEEGLRKTIEWYTQNP 323 (668)
Q Consensus 308 ~~~~l~~~~~~~~~~~ 323 (668)
++|+|+++++||++..
T Consensus 317 l~~gi~~~~~~~~~~~ 332 (340)
T PLN02653 317 FEQLVKMMVDEDLELA 332 (340)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988643
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=328.40 Aligned_cols=285 Identities=78% Similarity=1.270 Sum_probs=234.1
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceeh
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRT 460 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 460 (668)
.+.||||||||+||||++|+++|+++|++|....+|+.|.+.+...++..+||+|||+||.++.+.+++++.+|..++++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~ 86 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRA 86 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHH
Confidence 34589999999999999999999999999987788999988888888888899999999988544445677889999999
Q ss_pred hhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeee
Q 005949 461 NVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 540 (668)
Q Consensus 461 Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 540 (668)
|+.|+.+|+++|++.+++++++||++||++....|.+.+.++.||+.|.++.+.||.||.++|+++..|.+.+++|+.+.
T Consensus 87 Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~~~lr~~~~ 166 (298)
T PLN02778 87 NVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMP 166 (298)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhccEEeeeccc
Confidence 99999999999999999999999999998654333222345778888877778999999999999999988888888776
Q ss_pred ecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCC
Q 005949 541 ISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNF 620 (668)
Q Consensus 541 r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~ 620 (668)
+..+...+.+|+..++.+.+....+.+++|++|++++++.++++...|+||+++++.+|++|+++.+++.+|.+..+..+
T Consensus 167 ~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~ 246 (298)
T PLN02778 167 ISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNF 246 (298)
T ss_pred CCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccc
Confidence 65543344578999988887777777999999999999999987667899999999999999999999999976544434
Q ss_pred CHHHhhhhhccCCCCCccChhHHHhhcCC-ccChHHHHHHHHhccC
Q 005949 621 TLEEQAKVIVAPRSNNEMDASKLKKEFPE-LLSIKDSLIKYVFEPN 665 (668)
Q Consensus 621 ~~~~~~~~~~~~~~~~~ld~~k~~~~~g~-~~~~~~~l~~~~~~~~ 665 (668)
...+.......++....||++|+++.++. .+..+++++..++.++
T Consensus 247 ~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~~~~~~~~~~~~~~~ 292 (298)
T PLN02778 247 TLEEQAKVIVAPRSNNELDTTKLKREFPELLPIKESLIKYVFEPNK 292 (298)
T ss_pred cHHHHHHHHhCCCccccccHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 33333222344455558999999999994 6777888888777763
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=325.79 Aligned_cols=304 Identities=23% Similarity=0.308 Sum_probs=238.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.+|+|||||||||||+++++.|+++ +++|++++|.... .... .....+++.+|++|.+.+..++ .++|+|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~-~~~~-----~~~~~~~~~~Dl~d~~~~~~~~--~~~D~V 89 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNE-HMSE-----DMFCHEFHLVDLRVMENCLKVT--KGVDHV 89 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEecccc-cccc-----ccccceEEECCCCCHHHHHHHH--hCCCEE
Confidence 3689999999999999999999998 6889998875321 1110 0113578899999999888877 579999
Q ss_pred EEcCccCCcc-cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCc-CCCCCCC--CCCCCCChhH
Q 005949 85 MHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA-VVGNHEA--SQLLPTNPYS 160 (668)
Q Consensus 85 ih~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~-~~~~~e~--~~~~p~~~Y~ 160 (668)
||+|+..... ....++...+..|+.++.+|+++|++.+ +++|||+||..+|+...... ..+..|+ .+..|.+.|+
T Consensus 90 ih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg 168 (370)
T PLN02695 90 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYG 168 (370)
T ss_pred EEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHH
Confidence 9999865321 1223455667899999999999999876 89999999999999764321 1122333 3677889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHc-CCCceeecCCCceEeceeHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMR-GLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
.+|..+|.+++.++++++++++++||+++|||+... ..+.+.++..+.. +.++.+++++.+.++|+|++|+++++
T Consensus 169 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai 248 (370)
T PLN02695 169 LEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGV 248 (370)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHH
Confidence 999999999999988889999999999999997632 1245566666554 46778889999999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCCHHHHHHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRK 314 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~ 314 (668)
+.+++.+ .+++||+++++.+|+.|+++.+.+..|.+.+ +...+. +.......+|++|+++ |||+|+++++++|++
T Consensus 249 ~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~--i~~~~~-~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~ 324 (370)
T PLN02695 249 LRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLP--IKHIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRI 324 (370)
T ss_pred HHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCC--ceecCC-CCCccccccCHHHHHHhcCCCCCCCHHHHHHH
Confidence 9888765 4579999999999999999999999987543 222221 2122335689999984 999999999999999
Q ss_pred HHHHHhhCC
Q 005949 315 TIEWYTQNP 323 (668)
Q Consensus 315 ~~~~~~~~~ 323 (668)
+++|+++..
T Consensus 325 ~~~~~~~~~ 333 (370)
T PLN02695 325 TYFWIKEQI 333 (370)
T ss_pred HHHHHHHHH
Confidence 999998865
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=351.22 Aligned_cols=308 Identities=22% Similarity=0.338 Sum_probs=243.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHH-HHHHhccCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADL-VNFLLITESI 81 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~ 81 (668)
.+.+|+|||||||||||++|++.|++++ +++|++++|.... ...+ ....+++++.+|++|.+. +.+++ .++
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~-g~~V~~l~r~~~~--~~~~---~~~~~~~~~~gDl~d~~~~l~~~l--~~~ 383 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDD-NYEVYGLDIGSDA--ISRF---LGHPRFHFVEGDISIHSEWIEYHI--KKC 383 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCC-CcEEEEEeCCchh--hhhh---cCCCceEEEeccccCcHHHHHHHh--cCC
Confidence 4567899999999999999999999863 6899999885421 1111 112468999999998655 56677 579
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC-------C
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL-------L 154 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------~ 154 (668)
|+|||+||.........++...+++|+.++.+++++|++.+ ++|||+||..+||.....+ .+|+.+. .
T Consensus 384 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~---~~E~~~~~~~~p~~~ 458 (660)
T PRK08125 384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKY---FDEDTSNLIVGPINK 458 (660)
T ss_pred CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCC---cCccccccccCCCCC
Confidence 99999999876544556778889999999999999999976 7999999999999754322 2444321 2
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC--------CCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF--------PEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
|.+.|+.+|.++|.+++.++++++++++++||++||||+.. ...+++.++..+..++++.+.++|.+.|+|+
T Consensus 459 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i 538 (660)
T PRK08125 459 QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFT 538 (660)
T ss_pred CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeecee
Confidence 45689999999999999998888999999999999999753 2356788888888888888888999999999
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcceEeccC--------------CCCCCc
Q 005949 227 YCEDVAEAFECILHKGE---VGHVYNVGTKK-ERRVIDVAKDICKLFSMDPETSIKFVEN--------------RPFNDQ 288 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~~---~~~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~--------------~~~~~~ 288 (668)
|++|++++++.+++++. .+++||+++++ .+|+.|+++.+.+.+|..+.. +..... ......
T Consensus 539 ~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (660)
T PRK08125 539 DIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLR-DHFPPFAGFRVVESSSYYGKGYQDVE 617 (660)
T ss_pred eHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccc-ccCCcccccccccccccccccccccc
Confidence 99999999999998742 36799999885 799999999999999864211 111000 001223
Q ss_pred ccccChHHHH-hCCCcccCCHHHHHHHHHHHHhhCCC
Q 005949 289 RYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 289 ~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
...+|++|++ +|||+|+++++|+|+++++|++++.+
T Consensus 618 ~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~ 654 (660)
T PRK08125 618 HRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_pred ccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence 3457999997 59999999999999999999997654
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=322.27 Aligned_cols=300 Identities=19% Similarity=0.249 Sum_probs=227.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC---ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
++|+||||||+||||+++++.|+++ +++|++++|...... ...+. ....+++++.+|+.|.+.+.+++ .++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~--~~~ 82 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELE--GGKERLILCKADLQDYEALKAAI--DGC 82 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhh--CCCCcEEEEecCcCChHHHHHHH--hcC
Confidence 4679999999999999999999999 678888877532111 01111 11235888999999999999998 679
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCc-cccCCCCCCcCCCCCCCC------CCC
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD-EVYGETDEDAVVGNHEAS------QLL 154 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~~~~e~~------~~~ 154 (668)
|+|||+|+.. ..++...+++|+.++.+++++|++.+ +++||++||. ++||.....+....+|++ +..
T Consensus 83 d~Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~ 156 (342)
T PLN02214 83 DGVFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKN 156 (342)
T ss_pred CEEEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccc
Confidence 9999999964 24567889999999999999999976 8999999995 689754322211234442 334
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
|.++|+.+|..+|.+++.++++++++++++||++||||+..+. ..+..++. ...+.... . +.+.++|||++|+|
T Consensus 157 p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~-~--~~~~~~~i~V~Dva 232 (342)
T PLN02214 157 TKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLK-YLTGSAKT-Y--ANLTQAYVDVRDVA 232 (342)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCccc-C--CCCCcCeeEHHHHH
Confidence 6778999999999999999888899999999999999986432 22323333 33444332 2 34678999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHH
Q 005949 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGL 312 (668)
Q Consensus 233 ~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l 312 (668)
++++.+++++..++.||+++ ...++.|+++.+.+.++... .........+.......+|++|+++|||+|+ +++|+|
T Consensus 233 ~a~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~-~lee~i 309 (342)
T PLN02214 233 LAHVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYP-LPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT-STKQSL 309 (342)
T ss_pred HHHHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCC-CCCCCccccCCCCCccccCcHHHHHcCCccc-CHHHHH
Confidence 99999999876677999986 57899999999999986321 1111111222233455789999999999994 999999
Q ss_pred HHHHHHHhhCC
Q 005949 313 RKTIEWYTQNP 323 (668)
Q Consensus 313 ~~~~~~~~~~~ 323 (668)
+++++|+++..
T Consensus 310 ~~~~~~~~~~~ 320 (342)
T PLN02214 310 YDTVKSLQEKG 320 (342)
T ss_pred HHHHHHHHHcC
Confidence 99999998764
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=324.66 Aligned_cols=318 Identities=29% Similarity=0.444 Sum_probs=245.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCC--cCCCCeEEEEccCCCHHHHHHHh
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPS--KASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|+ |++++|||||||||||++|+++|+++ +++|+++++...... ...+... ....+++++.+|+.|.+.+.+++
T Consensus 1 ~~-~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~ 77 (352)
T PLN02240 1 MS-LMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVF 77 (352)
T ss_pred CC-CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHH
Confidence 44 45689999999999999999999998 678988876432110 0011000 01236789999999999999988
Q ss_pred ccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCC
Q 005949 77 ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 156 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 156 (668)
...++|+|||+|+.........++...++.|+.++.+++++|++.+ +++||++||+.+|+.....+ .+|+.+..|.
T Consensus 78 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~---~~E~~~~~~~ 153 (352)
T PLN02240 78 ASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVP---CTEEFPLSAT 153 (352)
T ss_pred HhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC---CCCCCCCCCC
Confidence 6568999999999765444456778899999999999999999876 88999999999998654332 3777888888
Q ss_pred ChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHHcCC--Cceeec------
Q 005949 157 NPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMRGL--PLPIHG------ 217 (668)
Q Consensus 157 ~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~~~--~~~~~~------ 217 (668)
+.|+.+|..+|.+++.++.. .+++++++|++++||+... +..+++.+ ..+..++ .+.+++
T Consensus 154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 232 (352)
T PLN02240 154 NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYV-QQVAVGRRPELTVFGNDYPTK 232 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHH-HHHHhCCCCceEEeCCCCCCC
Confidence 99999999999999988654 4799999999999997421 12234433 3344333 344443
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC-----CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCccccc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG-----EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFL 292 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~-----~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 292 (668)
+|.+.++|+|++|++++++.+++.. ..+++||+++++++|+.|+++.+++.+|.+.+ +...+.++.....+..
T Consensus 233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~ 310 (352)
T PLN02240 233 DGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIP--LKLAPRRPGDAEEVYA 310 (352)
T ss_pred CCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCC--ceeCCCCCCChhhhhc
Confidence 6789999999999999998887632 23579999999999999999999999997644 3333444444455678
Q ss_pred ChHHHH-hCCCcccCCHHHHHHHHHHHHhhCCCcccc
Q 005949 293 DDQKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWGD 328 (668)
Q Consensus 293 ~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~ 328 (668)
|++|++ +|||+|+++++++|+++++|+++++..++.
T Consensus 311 d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~~~~ 347 (352)
T PLN02240 311 STEKAEKELGWKAKYGIDEMCRDQWNWASKNPYGYGS 347 (352)
T ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCccccCC
Confidence 999997 599999999999999999999998755443
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=315.50 Aligned_cols=281 Identities=20% Similarity=0.204 Sum_probs=227.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
||||||||+||||++|++.|+++| +|++++|.. ..+.+|++|.+.+.+++...++|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~-----------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHS-----------------TDYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEecccc-----------------ccccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999984 578888742 134689999999999986668999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
||+....+.++.++...+++|+.++.+|+++|++.+ .+|||+||..||++.... +.+|+++..|.++|+.+|..+
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~Ss~~Vy~~~~~~---p~~E~~~~~P~~~Yg~sK~~~ 135 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYSTDYVFPGTGDI---PWQETDATAPLNVYGETKLAG 135 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEccceEECCCCCC---CcCCCCCCCCCCHHHHHHHHH
Confidence 999988777777888889999999999999999987 489999999999876543 246778888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC--CCceEeceeHHHHHHHHHHHHhcCCC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD--GSNVRSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
|++++.+. .+.+++|++++|||++ .++++.+++.+.+++++.+.++ +.+.+.+.+++|+++++..+++.+..
T Consensus 136 E~~~~~~~----~~~~ilR~~~vyGp~~--~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~ 209 (299)
T PRK09987 136 EKALQEHC----AKHLIFRTSWVYAGKG--NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV 209 (299)
T ss_pred HHHHHHhC----CCEEEEecceecCCCC--CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC
Confidence 99998764 3579999999999975 3677888888888888888877 66666777788888888887766555
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHh---CCCCC-cceEecc-----CCCCCCcccccChHHHHh-CCCcccCCHHHHHHH
Q 005949 245 GHVYNVGTKKERRVIDVAKDICKLF---SMDPE-TSIKFVE-----NRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRK 314 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~el~~~i~~~~---g~~~~-~~~~~~~-----~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~ 314 (668)
+++||+++++.+|+.|+++.|.+.+ |.+.+ ..+...+ ..........+|++|+++ |||+|. +|+++|++
T Consensus 210 ~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~ 288 (299)
T PRK09987 210 AGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKR 288 (299)
T ss_pred CCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHH
Confidence 5799999999999999999998764 43321 1122211 222334566899999986 999986 99999999
Q ss_pred HHHHH
Q 005949 315 TIEWY 319 (668)
Q Consensus 315 ~~~~~ 319 (668)
+++.+
T Consensus 289 ~~~~~ 293 (299)
T PRK09987 289 MLTEL 293 (299)
T ss_pred HHHHH
Confidence 98755
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=295.82 Aligned_cols=312 Identities=31% Similarity=0.474 Sum_probs=258.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIP-SKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
.++||||||+||||+|.+-+|+++ ++.|+++|...+.- .+..... ......+.++++|++|.+++++++++.++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 479999999999999999999999 78899998865421 1111111 112467999999999999999999999999
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC-CCChhHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-PTNPYSA 161 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~-p~~~Y~~ 161 (668)
.|+|+|+...+..+..+|..++.+|+.||.+|++.+++++ ++.+|+.||+.|||.+..- +.+|.++.. |.++|+.
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~i---p~te~~~t~~p~~pyg~ 155 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKV---PITEEDPTDQPTNPYGK 155 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCccee---eccCcCCCCCCCCcchh
Confidence 9999999998888889999999999999999999999988 9999999999999999874 457877777 9999999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeC--CCC--------CCCChHHHHHHHHHcC-CCcee------ecCCCceEe
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYG--PNQ--------FPEKLIPKFILLAMRG-LPLPI------HGDGSNVRS 224 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G--~~~--------~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~ 224 (668)
+|.++|+.+..+.+.+++.++.||..+++| |.+ .+.++.+.....+... ..+.+ ..+|...|+
T Consensus 156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrd 235 (343)
T KOG1371|consen 156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRD 235 (343)
T ss_pred hhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeec
Confidence 999999999999988899999999999999 533 2234454333333221 11122 235689999
Q ss_pred ceeHHHHHHHHHHHHhcCCC---CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hC
Q 005949 225 YLYCEDVAEAFECILHKGEV---GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SL 300 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~~---~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l 300 (668)
++|+-|.|+.+..++++... .++||++.+...++.++..++.+++|.+.+ +...+.++........+.++++ +|
T Consensus 236 yi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k--~~~v~~R~gdv~~~ya~~~~a~~el 313 (343)
T KOG1371|consen 236 YIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIK--KKVVPRRNGDVAFVYANPSKAQREL 313 (343)
T ss_pred ceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCC--ccccCCCCCCceeeeeChHHHHHHh
Confidence 99999999999999987542 359999999999999999999999998876 4445568877778888888885 79
Q ss_pred CCcccCCHHHHHHHHHHHHhhCCCc
Q 005949 301 GWSERTIWEEGLRKTIEWYTQNPDW 325 (668)
Q Consensus 301 G~~~~~~~~~~l~~~~~~~~~~~~~ 325 (668)
||+|..++++.+++++.|..+++..
T Consensus 314 gwk~~~~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 314 GWKAKYGLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred CCccccCHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999998754
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=318.18 Aligned_cols=287 Identities=23% Similarity=0.402 Sum_probs=229.9
Q ss_pred EEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcCc
Q 005949 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAA 89 (668)
Q Consensus 10 LVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 89 (668)
||||||||||++|++.|+++ +++|+++.+. ..+|+.|.+.+.+++...++|+|||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH--------------------KELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecc--------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 69999999999999999998 5555554331 1589999999999987778999999999
Q ss_pred cCCc-ccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC----CCCCCC-hhHHHH
Q 005949 90 QTHV-DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS----QLLPTN-PYSATK 163 (668)
Q Consensus 90 ~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~----~~~p~~-~Y~~sK 163 (668)
.... .....++.+.++.|+.++.+|+++|++.+ +++||++||..||+.....+ .+|++ +..|.+ +|+.+|
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~---~~E~~~~~~~~~p~~~~Y~~sK 134 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQP---IPETALLTGPPEPTNEWYAIAK 134 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCC---CCHHHhccCCCCCCcchHHHHH
Confidence 8542 22345677889999999999999999977 89999999999999754333 24543 344544 599999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHH----HHcCCCcee-ecCCCceEeceeHHHHHHH
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILL----AMRGLPLPI-HGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~i~v~D~a~a 234 (668)
.++|++++.+.+.++++++++||+.||||+... ..+++.++.. ...+.++.+ ++++.+.++|+|++|++++
T Consensus 135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~ 214 (306)
T PLN02725 135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADA 214 (306)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHH
Confidence 999999999888889999999999999997531 2344554433 345555555 6788999999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHHH
Q 005949 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRK 314 (668)
Q Consensus 235 i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~ 314 (668)
++.+++.....+.||++++..+|+.|+++.+++.++.+.. +.+.+.++.......+|++|+++|||+|+++++++|++
T Consensus 215 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~ 292 (306)
T PLN02725 215 VVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGE--LVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQE 292 (306)
T ss_pred HHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCc--eeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHH
Confidence 9999987655678999999999999999999999987543 33333333334456789999999999999999999999
Q ss_pred HHHHHhhCCC
Q 005949 315 TIEWYTQNPD 324 (668)
Q Consensus 315 ~~~~~~~~~~ 324 (668)
+++|++++..
T Consensus 293 ~~~~~~~~~~ 302 (306)
T PLN02725 293 TYKWYLENYE 302 (306)
T ss_pred HHHHHHhhhh
Confidence 9999998764
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=318.26 Aligned_cols=308 Identities=19% Similarity=0.208 Sum_probs=229.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIP-SKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
.+|+||||||+||||+++++.|+++ +++|+++.|..... ....+.. .....+++++.+|++|.+.+.+++ .++|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d 79 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI--DGCE 79 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH--cCCC
Confidence 3689999999999999999999999 56777666543211 1100000 111246889999999999999988 5799
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCC--CcCCCCCCCCCCCC-----
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE--DAVVGNHEASQLLP----- 155 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~--~~~~~~~e~~~~~p----- 155 (668)
+|||+||.........++...+++|+.++.+++++|.+...+++||++||..+|+.... .+....+|+.+..|
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~ 159 (325)
T PLN02989 80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEE 159 (325)
T ss_pred EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcc
Confidence 99999997654334455678899999999999999988544689999999888765421 11112356655544
Q ss_pred -CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 156 -TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 156 -~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
.++|+.+|..+|.+++.+.++++++++++||+++|||+..+. .+...++..+..++... . .+.++|+|++|+|+
T Consensus 160 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~ 235 (325)
T PLN02989 160 RKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVAL 235 (325)
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHH
Confidence 367999999999999999888899999999999999987543 34445555555555432 2 35689999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHH
Q 005949 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLR 313 (668)
Q Consensus 234 ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~ 313 (668)
+++.+++.+..+++||++ +..+|+.|+++.+.+.++.... ........+.....+..|++|+++|||.|+++++++|+
T Consensus 236 a~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~ 313 (325)
T PLN02989 236 AHVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDLCI-ADRNEDITELNSVTFNVCLDKVKSLGIIEFTPTETSLR 313 (325)
T ss_pred HHHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCCC-CCCCCCcccccccCcCCCHHHHHHcCCCCCCCHHHHHH
Confidence 999999876666799996 5689999999999999973211 00000011112235678999998999999999999999
Q ss_pred HHHHHHhhC
Q 005949 314 KTIEWYTQN 322 (668)
Q Consensus 314 ~~~~~~~~~ 322 (668)
++++|++..
T Consensus 314 ~~~~~~~~~ 322 (325)
T PLN02989 314 DTVLSLKEK 322 (325)
T ss_pred HHHHHHHHh
Confidence 999999864
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=297.74 Aligned_cols=265 Identities=24% Similarity=0.319 Sum_probs=220.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc---cccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceeh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY---GKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRT 460 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~---~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 460 (668)
|||||||++|++|+.|++.|. .+++|.. -..|++|++.+.+.+...+||+|||+|+++ .++.++.+++..+.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt---~vD~aE~~~e~A~~v 76 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYT---AVDKAESEPELAFAV 76 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhhCCCEEEECcccc---ccccccCCHHHHHHh
Confidence 569999999999999999998 5566543 357999999999999999999999999999 899999999999999
Q ss_pred hhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhc-cCeeEeEEee
Q 005949 461 NVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRM 539 (668)
Q Consensus 461 Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~-~~~~~l~~~~ 539 (668)
|..|+.|++++|++.|.++||+||.+||.|....| |.|+|.+. |.+.||+||+++|+.++.+ .+...+|+.+
T Consensus 77 Na~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~------Y~E~D~~~-P~nvYG~sKl~GE~~v~~~~~~~~I~Rtsw 149 (281)
T COG1091 77 NATGAENLARAAAEVGARLVHISTDYVFDGEKGGP------YKETDTPN-PLNVYGRSKLAGEEAVRAAGPRHLILRTSW 149 (281)
T ss_pred HHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCC------CCCCCCCC-ChhhhhHHHHHHHHHHHHhCCCEEEEEeee
Confidence 99999999999999999999999999999887666 78888765 5699999999999999998 5666677777
Q ss_pred eecCCCCChhhHHHHhhcc----cc---eeecCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhc
Q 005949 540 PISSDLNNPRNFITKISRY----NK---VVNIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYI 611 (668)
Q Consensus 540 ~r~~~~~g~~~~~~~~~~~----~~---~~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~ 611 (668)
+... +| .+|+..+++. +. +.++.+++++..|+|+++..++.+. ..|+||+++...+|+.||++.|.+.+
T Consensus 150 v~g~--~g-~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~ 226 (281)
T COG1091 150 VYGE--YG-NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEA 226 (281)
T ss_pred eecC--CC-CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHh
Confidence 6443 22 4676665543 22 2245568999999999999999887 56699999999999999999999999
Q ss_pred CCCCCCC-CCCHHHhhhhhccCCC-CCccChhHHHhhcC-CccChHHHHHHHHhcc
Q 005949 612 NPEFKWV-NFTLEEQAKVIVAPRS-NNEMDASKLKKEFP-ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 612 g~~~~~~-~~~~~~~~~~~~~~~~-~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~ 664 (668)
+.+..+. ..... ....+..|| ++.||+.|+++.+| ++++|++++.+++++.
T Consensus 227 ~~~~~v~~~~~~~--~~~~~a~RP~~S~L~~~k~~~~~g~~~~~w~~~l~~~~~~~ 280 (281)
T COG1091 227 GVDGEVIEPIASA--EYPTPAKRPANSSLDTKKLEKAFGLSLPEWREALKALLDEL 280 (281)
T ss_pred CCCcccccccccc--ccCccCCCCcccccchHHHHHHhCCCCccHHHHHHHHHhhc
Confidence 9776443 22222 224455665 56899999999999 7899999999998865
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=313.82 Aligned_cols=308 Identities=28% Similarity=0.460 Sum_probs=236.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
|+|||||||||||++|++.|+++ +++|+++++...... ...+. .....++.++.+|+.|.+.+..++...++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHH-HhcCCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence 48999999999999999999998 678888776422111 00010 11123567889999999999988865689999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC-CCCChhHHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL-LPTNPYSATK 163 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-~p~~~Y~~sK 163 (668)
||+|+.........++.+.+++|+.++.+++++|++.+ +++||++||..+||.....+ .+|+.+. .|.+.|+.+|
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~---~~E~~~~~~p~~~Y~~sK 153 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIP---YVESFPTGTPQSPYGKSK 153 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCc---cccccCCCCCCChhHHHH
Confidence 99999765433345667889999999999999999976 88999999999998654322 3666665 6788999999
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEeeCceeCCCC------C----CCChHHHHHHHHHcCC-Cceeec------CCCceEec
Q 005949 164 AGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQ------F----PEKLIPKFILLAMRGL-PLPIHG------DGSNVRSY 225 (668)
Q Consensus 164 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~------~----~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~ 225 (668)
..+|++++.++++. +++++++|++++|||.. . +..+++.+.+....+. .+.+++ +|.++++|
T Consensus 154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (338)
T PRK10675 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence 99999999987653 79999999999999742 1 1234444444333322 244433 57889999
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG 301 (668)
+|++|++++++.+++.. ..+++||+++++.+|+.|+++.+.+.+|.+.. +...+..+......++|++|++ .||
T Consensus 234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg 311 (338)
T PRK10675 234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELN 311 (338)
T ss_pred EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCC--eeeCCCCCCchhhhhcCHHHHHHHhC
Confidence 99999999999888752 23579999999999999999999999997643 3333334444455678999997 599
Q ss_pred CcccCCHHHHHHHHHHHHhhCC
Q 005949 302 WSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 302 ~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
|+|+++++++|+++++|+++++
T Consensus 312 ~~p~~~~~~~~~~~~~~~~~~~ 333 (338)
T PRK10675 312 WRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_pred CCCcCcHHHHHHHHHHHHHhhh
Confidence 9999999999999999998864
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=313.30 Aligned_cols=309 Identities=20% Similarity=0.266 Sum_probs=223.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+++++||||||+||||++|++.|+++ +++|+++.|...... ...+.......+++++.+|++|.+.+.+++ .++|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 82 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPI--AGCD 82 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHH--hcCC
Confidence 45789999999999999999999999 567776665432110 000000001125889999999999999988 5799
Q ss_pred EEEEcCccCCcccccCChH-HHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC-cCCCCCCC---------C
Q 005949 83 TIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED-AVVGNHEA---------S 151 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~-~~~~~~e~---------~ 151 (668)
+|||+|+.... ...++. .++++|+.++.++++++.+.+.+++||++||.++|+..... .....+|. .
T Consensus 83 ~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T PLN00198 83 LVFHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS 160 (338)
T ss_pred EEEEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh
Confidence 99999996432 123333 56799999999999999886448899999999999854210 00011221 1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeec-CCCc----eEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHG-DGSN----VRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~ 224 (668)
+..|.++|+.+|.++|.+++.++++++++++++||++||||+... ...+. ++..+..++.+.+.+ ++.+ .++
T Consensus 161 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (338)
T PLN00198 161 EKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSIS 239 (338)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcc
Confidence 234677899999999999999998889999999999999998532 22332 333455565554443 2322 479
Q ss_pred ceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcc
Q 005949 225 YLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~ 304 (668)
|+||+|++++++.+++.+..++.|+ +++...++.|+++.+.+.++... ....+. ..+ ......+|++|++++||+|
T Consensus 240 ~i~V~D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~k~~~~G~~p 315 (338)
T PLN00198 240 ITHVEDVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQYQ-VPTDFG-DFP-SKAKLIISSEKLISEGFSF 315 (338)
T ss_pred eeEHHHHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCCC-CCcccc-ccC-CCCccccChHHHHhCCcee
Confidence 9999999999999998766556785 54677899999999999886421 111111 111 1234568999998899999
Q ss_pred cCCHHHHHHHHHHHHhhCC
Q 005949 305 RTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~ 323 (668)
+++++|+|+++++||+++.
T Consensus 316 ~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 316 EYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred cCcHHHHHHHHHHHHHHcC
Confidence 9999999999999999754
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=309.87 Aligned_cols=305 Identities=19% Similarity=0.237 Sum_probs=225.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIP-SKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
++|+|||||||||||++++++|+++ +++|++++|...... ...+.. .....+++++.+|+.|++.+..++ .++|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d 78 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVV--DGCE 78 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHH--cCCC
Confidence 3579999999999999999999999 567777766432111 111110 011246889999999999999998 5799
Q ss_pred EEEEcCccCCcccccCChH-HHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc--ccCCCCCCcCCCCCCCCCCCC----
Q 005949 83 TIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE--VYGETDEDAVVGNHEASQLLP---- 155 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~--vyg~~~~~~~~~~~e~~~~~p---- 155 (668)
+|||+|+.... ...++. ..+++|+.++.+++++|++...+++||++||.+ +|+..........+|+.+..|
T Consensus 79 ~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~ 156 (322)
T PLN02662 79 GVFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCE 156 (322)
T ss_pred EEEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhh
Confidence 99999997532 223444 788999999999999999863389999999976 465432111112355554444
Q ss_pred --CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 156 --TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 156 --~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
.++|+.+|..+|.+++.+.++++++++++||+++|||+..+. .....++..+..+... . +.+.++|+|++|+|
T Consensus 157 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva 232 (322)
T PLN02662 157 ESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVRDVA 232 (322)
T ss_pred cccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHH
Confidence 258999999999999999888899999999999999986442 3444455555555432 1 24678999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHH
Q 005949 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGL 312 (668)
Q Consensus 233 ~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l 312 (668)
++++.+++.+..++.||++ +..+++.|+++.+.+.++.... .....+..+ ......+|++|+++|||++ .+++++|
T Consensus 233 ~a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~-~~~~~~~~~-~~~~~~~d~~k~~~lg~~~-~~~~~~l 308 (322)
T PLN02662 233 NAHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQL-PEKCADDKP-YVPTYQVSKEKAKSLGIEF-IPLEVSL 308 (322)
T ss_pred HHHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCCC-CCCCCCccc-cccccccChHHHHHhCCcc-ccHHHHH
Confidence 9999999877656689997 5789999999999998864221 111111111 2344679999999999997 5999999
Q ss_pred HHHHHHHhhCC
Q 005949 313 RKTIEWYTQNP 323 (668)
Q Consensus 313 ~~~~~~~~~~~ 323 (668)
+++++||+++.
T Consensus 309 ~~~~~~~~~~~ 319 (322)
T PLN02662 309 KDTVESLKEKG 319 (322)
T ss_pred HHHHHHHHHcC
Confidence 99999998764
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=317.83 Aligned_cols=264 Identities=27% Similarity=0.408 Sum_probs=192.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc---ccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceeh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG---KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRT 460 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~---~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 460 (668)
|||||+|++||||++|.++|.++|+++... ..|++|.+.+.+.++..+||+||||||++ +++.|+.+|...+++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~---~~~~ce~~p~~a~~i 77 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYT---NVDACEKNPEEAYAI 77 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE---------HHHHHHSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceee---cHHhhhhChhhhHHH
Confidence 899999999999999999999999877544 78999999999999999999999999999 899999999999999
Q ss_pred hhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhc-cCeeEeEEee
Q 005949 461 NVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRM 539 (668)
Q Consensus 461 Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~-~~~~~l~~~~ 539 (668)
|+.++.+|+++|.+.+++++|+||..||++....| |.|+|.+ .|.+.||++|+++|+.+++. .+. .+
T Consensus 78 N~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~------y~E~d~~-~P~~~YG~~K~~~E~~v~~~~~~~-----~I 145 (286)
T PF04321_consen 78 NVDATKNLAEACKERGARLIHISTDYVFDGDKGGP------YTEDDPP-NPLNVYGRSKLEGEQAVRAACPNA-----LI 145 (286)
T ss_dssp HTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSS------B-TTS-----SSHHHHHHHHHHHHHHHH-SSE-----EE
T ss_pred hhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccc------cccCCCC-CCCCHHHHHHHHHHHHHHHhcCCE-----EE
Confidence 99999999999999999999999999998876655 6777666 56799999999999999884 444 44
Q ss_pred eecCCCCCh--hhHHHH----hhcccceeec---CCCcccHhhHHHHHHHHHhccCC-----ceeeecCCCccCHHHHHH
Q 005949 540 PISSDLNNP--RNFITK----ISRYNKVVNI---PNSMTVLDELLPISIEMAKRNLR-----GIWNFTNPGVVSHNEILE 605 (668)
Q Consensus 540 ~r~~~~~g~--~~~~~~----~~~~~~~~~~---~~~~~~v~D~a~~~~~~~~~~~~-----g~~ni~~~~~~s~~e~~~ 605 (668)
+|.+.+||+ .+|+.+ +..++..... ..+++|++|+|+++..++++... |+||+++++.+|..||++
T Consensus 146 lR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~ 225 (286)
T PF04321_consen 146 LRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAE 225 (286)
T ss_dssp EEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHH
T ss_pred EecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHH
Confidence 555555555 244444 3334443333 33899999999999999998755 999999999999999999
Q ss_pred HHHhhcCCCCCC-CCCCHHHhhhhhccCCC-CCccChhHHHhhcC-CccChHHHHHHHHhcc
Q 005949 606 MYKKYINPEFKW-VNFTLEEQAKVIVAPRS-NNEMDASKLKKEFP-ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 606 ~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~ 664 (668)
.+++.+|.+... .+.+..+. .....++ +..||++|+++.+| .+++|+++|+++++++
T Consensus 226 ~i~~~~~~~~~~i~~~~~~~~--~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 226 AIAKILGLDPELIKPVSSSEF--PRAAPRPRNTSLDCRKLKNLLGIKPPPWREGLEELVKQY 285 (286)
T ss_dssp HHHHHHTHCTTEEEEESSTTS--TTSSGS-SBE-B--HHHHHCTTS---BHHHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEecccccC--CCCCCCCCcccccHHHHHHccCCCCcCHHHHHHHHHHHh
Confidence 999999988732 23332221 2233344 66899999999999 8899999999999875
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=309.42 Aligned_cols=288 Identities=22% Similarity=0.264 Sum_probs=214.9
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEE-EcCCCccCCccccCCCcCCCCeEEEEccCCCH---HH-HHHHhcc---CC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVV-LDKLDYCSNLKNLIPSKASSNFKFVKGDIASA---DL-VNFLLIT---ES 80 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~-~~~~~~~---~~ 80 (668)
|||||||||||++|++.|+++ ++++++ +++...... ...+..+|+.|. +. +..++.. .+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 68 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTK-----------FVNLVDLDIADYMDKEDFLAQIMAGDDFGD 68 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchH-----------HHhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence 899999999999999999998 564444 444221000 011234555554 33 2333321 26
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|+|||+||..... ..++...++.|+.++.+|+++|++.+ + +||++||..+||...... .+|..+..|.++|+
T Consensus 69 ~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y~ 141 (308)
T PRK11150 69 IEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDF---IEEREYEKPLNVYG 141 (308)
T ss_pred ccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCC---CccCCCCCCCCHHH
Confidence 99999999965432 23455688999999999999999976 5 699999999999764322 35667778889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC----hHHHHHHHHHcCCCceee-cCCCceEeceeHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK----LIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~ai 235 (668)
.+|..+|++++.++.+++++++++||+++|||+..+.. +...+.+.+.+++...+. +++...|+|+|++|+++++
T Consensus 142 ~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~ 221 (308)
T PRK11150 142 YSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVN 221 (308)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHH
Confidence 99999999999998888999999999999999864432 344555667777655454 5567789999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCC--C--CCcccccChHHHHhCCCccc-CCHHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP--F--NDQRYFLDDQKLTSLGWSER-TIWEE 310 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~--~~~~~~~~~~k~~~lG~~~~-~~~~~ 310 (668)
+.+++... +++||+++++.+|+.|+++.+.+.+|... +...+... . ......+|++|++++||+|+ .++++
T Consensus 222 ~~~~~~~~-~~~yni~~~~~~s~~el~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~ 297 (308)
T PRK11150 222 LWFWENGV-SGIFNCGTGRAESFQAVADAVLAYHKKGE---IEYIPFPDKLKGRYQAFTQADLTKLRAAGYDKPFKTVAE 297 (308)
T ss_pred HHHHhcCC-CCeEEcCCCCceeHHHHHHHHHHHhCCCc---ceeccCccccccccceecccCHHHHHhcCCCCCCCCHHH
Confidence 99888653 57999999999999999999999998531 11111111 0 11234689999999999997 59999
Q ss_pred HHHHHHHHHh
Q 005949 311 GLRKTIEWYT 320 (668)
Q Consensus 311 ~l~~~~~~~~ 320 (668)
+|+++++|+.
T Consensus 298 gl~~~~~~~~ 307 (308)
T PRK11150 298 GVAEYMAWLN 307 (308)
T ss_pred HHHHHHHHhh
Confidence 9999999975
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=311.69 Aligned_cols=309 Identities=19% Similarity=0.260 Sum_probs=221.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCC-CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIP-SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|.+ ..++||||||+||||+++++.|+++ +++|++++|..... ....+.. .....+++++.+|++|.+.+.+++
T Consensus 1 ~~~-~~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-- 75 (351)
T PLN02650 1 MGS-QKETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI-- 75 (351)
T ss_pred CCC-CCCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH--
Confidence 444 4579999999999999999999999 67888777643211 1101100 001135789999999999999988
Q ss_pred CCCCEEEEcCccCCcccccCCh-HHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC------
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS------ 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~------ 151 (668)
.++|+|||+|+..... ..++ ...+++|+.++.+++++|++.+.+++|||+||.++|+......+. .+|+.
T Consensus 76 ~~~d~ViH~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~-~~E~~~~~~~~ 152 (351)
T PLN02650 76 RGCTGVFHVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPV-YDEDCWSDLDF 152 (351)
T ss_pred hCCCEEEEeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCc-cCcccCCchhh
Confidence 5799999999875422 2233 478899999999999999987657899999999887654321110 12321
Q ss_pred ---CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHH--HHcCCCceeecCCCceEece
Q 005949 152 ---QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL--AMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 152 ---~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i 226 (668)
...|.++|+.+|.++|.+++.++++++++++++||++||||+.... ..+.++.. ...+.... .+ ..+.++|+
T Consensus 153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~r~~v 229 (351)
T PLN02650 153 CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS-MPPSLITALSLITGNEAH-YS-IIKQGQFV 229 (351)
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC-CCccHHHHHHHhcCCccc-cC-cCCCccee
Confidence 1224568999999999999999988899999999999999976431 11122221 12233221 22 22357999
Q ss_pred eHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccC
Q 005949 227 YCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERT 306 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~ 306 (668)
|++|++++++.+++++..++.| ++++..+++.|+++.+.+.++.... .... ...+........|++|+++|||+|++
T Consensus 230 ~V~Dva~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~-~~~~-~~~~~~~~~~~~d~~k~~~lG~~p~~ 306 (351)
T PLN02650 230 HLDDLCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNI-PARF-PGIDEDLKSVEFSSKKLTDLGFTFKY 306 (351)
T ss_pred eHHHHHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCC-CCCC-CCcCcccccccCChHHHHHhCCCCCC
Confidence 9999999999999877666688 5556889999999999998763211 1111 11222234456789998889999999
Q ss_pred CHHHHHHHHHHHHhhCC
Q 005949 307 IWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 307 ~~~~~l~~~~~~~~~~~ 323 (668)
+++++|+++++|+++..
T Consensus 307 ~l~egl~~~i~~~~~~~ 323 (351)
T PLN02650 307 SLEDMFDGAIETCREKG 323 (351)
T ss_pred CHHHHHHHHHHHHHHcC
Confidence 99999999999999765
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=304.08 Aligned_cols=300 Identities=35% Similarity=0.566 Sum_probs=244.7
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC-CEEEE
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI-DTIMH 86 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~-d~Vih 86 (668)
+|||||||||||++|+++|+++ +++|++++|......... .++.++.+|+.|.+.+.+++ ..+ |+|||
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~--~~~~d~vih 70 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELA--KGVPDAVIH 70 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHH--hcCCCEEEE
Confidence 5999999999999999999999 788999998643211100 46889999999998888877 344 99999
Q ss_pred cCccCCcccccC-ChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC-CCCCCCChhHHHHH
Q 005949 87 FAAQTHVDNSFG-NSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA-SQLLPTNPYSATKA 164 (668)
Q Consensus 87 ~a~~~~~~~~~~-~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-~~~~p~~~Y~~sK~ 164 (668)
+|+......... ++.+++..|+.++.+++++|++.+ +++|||.||.++|+...... ..+|+ .+..|.++|+.+|.
T Consensus 71 ~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~--~~~E~~~~~~p~~~Yg~sK~ 147 (314)
T COG0451 71 LAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPL--PIDEDLGPPRPLNPYGVSKL 147 (314)
T ss_pred ccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCC--CcccccCCCCCCCHHHHHHH
Confidence 999877544333 456799999999999999999955 99999999988888762221 33555 67777779999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCC-ceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE---KLIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
.+|..++.+...++++++++||++||||+..+. .++..++.....+.+ ....+++...++++|++|++++++.+++
T Consensus 148 ~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 227 (314)
T COG0451 148 AAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALE 227 (314)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHh
Confidence 999999999887799999999999999998765 566666666777775 5666788889999999999999999999
Q ss_pred cCCCCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcceEecc--CCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHH
Q 005949 241 KGEVGHVYNVGTKK-ERRVIDVAKDICKLFSMDPETSIKFVE--NRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTI 316 (668)
Q Consensus 241 ~~~~~~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~ 316 (668)
++..+ .||++++. ..++.|+++.+.+.+|..... +...+ ..........+|.+|++ +|||.|+.++++++.+++
T Consensus 228 ~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~ 305 (314)
T COG0451 228 NPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPL-IVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTL 305 (314)
T ss_pred CCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcc-eeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 88776 99999997 899999999999999987552 22222 23344456788999997 699999999999999999
Q ss_pred HHHhhCC
Q 005949 317 EWYTQNP 323 (668)
Q Consensus 317 ~~~~~~~ 323 (668)
+|+....
T Consensus 306 ~~~~~~~ 312 (314)
T COG0451 306 EWLLKKL 312 (314)
T ss_pred HHHHHhh
Confidence 9988653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=310.69 Aligned_cols=265 Identities=18% Similarity=0.224 Sum_probs=205.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------ccccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTD 456 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 456 (668)
||||||||+||||++|+++|+++| +|. .+.+|++|.+.+.+++++.+||+|||||+.. .++.++.+|..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~---~~~~~~~~~~~ 76 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIVNAAAHT---AVDKAESEPEF 76 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEEECCccC---CcchhhcCHHH
Confidence 689999999999999999999999 553 2347999999999999988899999999988 67777788888
Q ss_pred ceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeE
Q 005949 457 TIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLR 536 (668)
Q Consensus 457 ~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~ 536 (668)
.+++|+.++.+|+++|++.++++||+||+.||++....| +. |+.+..|.+.||.||.++|++++.+.. +
T Consensus 77 ~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p------~~-E~~~~~P~~~Yg~sK~~~E~~~~~~~~----~ 145 (299)
T PRK09987 77 AQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIP------WQ-ETDATAPLNVYGETKLAGEKALQEHCA----K 145 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCC------cC-CCCCCCCCCHHHHHHHHHHHHHHHhCC----C
Confidence 899999999999999999999999999999998765544 44 455667789999999999999988754 4
Q ss_pred EeeeecCCCCChh--hHHHH----hhcccceeecCC-------CcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHH
Q 005949 537 VRMPISSDLNNPR--NFITK----ISRYNKVVNIPN-------SMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 537 ~~~~r~~~~~g~~--~~~~~----~~~~~~~~~~~~-------~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e 602 (668)
.+++|++++|||+ +|+.. +.+++....+++ .+.+.||+++++..++++. ..|+||+++++.+|+.|
T Consensus 146 ~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e 225 (299)
T PRK09987 146 HLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVASGTTTWHD 225 (299)
T ss_pred EEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCCCCccHHH
Confidence 5999999999985 34433 334444333222 2244667778888777653 46899999999999999
Q ss_pred HHHHHHhhc---CCCCC---CCCCCHHHhhhhhccCC-CCCccChhHHHhhcC-CccChHHHHHHHHhccC
Q 005949 603 ILEMYKKYI---NPEFK---WVNFTLEEQAKVIVAPR-SNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 603 ~~~~i~~~~---g~~~~---~~~~~~~~~~~~~~~~~-~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~ 665 (668)
+++.+.+.+ |.+.+ +.+.+.... .....+ .+..+|++|+++.+| .+++|+++|+++++++.
T Consensus 226 ~~~~i~~~~~~~g~~~~~~~i~~~~~~~~--~~~~~rp~~~~ld~~k~~~~lg~~~~~~~~~l~~~~~~~~ 294 (299)
T PRK09987 226 YAALVFEEARKAGITLALNKLNAVPTSAY--PTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLTELF 294 (299)
T ss_pred HHHHHHHHHHhcCCCcCcCeeeecchhhc--CCCCCCCCcccCCHHHHHHHhCCCCccHHHHHHHHHHHHh
Confidence 999997754 43331 222322211 112233 366899999999888 66899999999998864
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=304.68 Aligned_cols=302 Identities=21% Similarity=0.217 Sum_probs=222.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIP-SKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
.+++|||||||||||++++++|+++ +++|+++.|..... ....+.. .....+++++.+|++|.+.+.+++ .++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d 79 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI--EGCD 79 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH--hCCC
Confidence 3579999999999999999999999 67787666643211 1111111 111246889999999999999998 5799
Q ss_pred EEEEcCccCCcccccCCh-HHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcccc--CCCCCCcCCCCCCCCCCC-----
Q 005949 83 TIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY--GETDEDAVVGNHEASQLL----- 154 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vy--g~~~~~~~~~~~e~~~~~----- 154 (668)
+|||+|+..... ..++ ...+++|+.|+.+++++|++...++|||++||.++| +..........+|+.+..
T Consensus 80 ~vih~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~ 157 (322)
T PLN02986 80 AVFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCR 157 (322)
T ss_pred EEEEeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhh
Confidence 999999975421 2233 357899999999999999985348999999998764 332211111234544332
Q ss_pred -CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 155 -PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 155 -p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
+.++|+.+|..+|.+++.+.++++++++++||++||||+..+. ++...++..+..+... . +.+.++|+|++|+|
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva 233 (322)
T PLN02986 158 ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVA 233 (322)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHH
Confidence 3578999999999999999888899999999999999986542 2333455555555543 2 34678999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcc--cccChHHHHhCCCcccCCHHH
Q 005949 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQR--YFLDDQKLTSLGWSERTIWEE 310 (668)
Q Consensus 233 ~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~k~~~lG~~~~~~~~~ 310 (668)
++++.+++.+..+++||++ +..+|+.|+++.+.+.++... +... ..+..... ..+|++|+++|||+|+ +++|
T Consensus 234 ~a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~~---~~~~-~~~~~~~~~~~~~d~~~~~~lg~~~~-~l~e 307 (322)
T PLN02986 234 LAHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPDLC---IADT-NEESEMNEMICKVCVEKVKNLGVEFT-PMKS 307 (322)
T ss_pred HHHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCCC---CCCC-CccccccccCCccCHHHHHHcCCccc-CHHH
Confidence 9999999987666799995 568999999999999986311 1111 11111112 2489999999999997 8999
Q ss_pred HHHHHHHHHhhC
Q 005949 311 GLRKTIEWYTQN 322 (668)
Q Consensus 311 ~l~~~~~~~~~~ 322 (668)
+|+++++|+++.
T Consensus 308 ~~~~~~~~~~~~ 319 (322)
T PLN02986 308 SLRDTILSLKEK 319 (322)
T ss_pred HHHHHHHHHHHc
Confidence 999999999874
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=280.09 Aligned_cols=269 Identities=22% Similarity=0.257 Sum_probs=222.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc------------------cccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK------------------GRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~------------------~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
++|+||||.||||+||+..|..+||+|..+. .++.--+-+..++..+ |.|||+|+..+
T Consensus 28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~ev--D~IyhLAapas-- 103 (350)
T KOG1429|consen 28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEV--DQIYHLAAPAS-- 103 (350)
T ss_pred cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHh--hhhhhhccCCC--
Confidence 7999999999999999999999999762211 1111113345577777 99999999884
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
......+|..++.+|+.||.+++-.|++.+.++++.||+.|||.+..+| +.+.+.....|..|.+.|...|..+|.+
T Consensus 104 -p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hp--q~e~ywg~vnpigpr~cydegKr~aE~L 180 (350)
T KOG1429|consen 104 -PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHP--QVETYWGNVNPIGPRSCYDEGKRVAETL 180 (350)
T ss_pred -CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCC--CccccccccCcCCchhhhhHHHHHHHHH
Confidence 4445678999999999999999999999999999999999999988887 2222333445778889999999999999
Q ss_pred HHhccCeeEeEEeeeecCCCCChh----------hHHHHhhcccceeecCC-----CcccHhhHHHHHHHHHhccCCcee
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTVLDELLPISIEMAKRNLRGIW 590 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~~g~~ 590 (668)
+.+|.+..|+.+++.|++|.|||+ +|+.+.++..+....++ +|+||+|++++++.+++.+..+.+
T Consensus 181 ~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~pv 260 (350)
T KOG1429|consen 181 CYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGPV 260 (350)
T ss_pred HHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCCc
Confidence 999999999999999999999997 68889999988777665 999999999999999999999999
Q ss_pred eecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 591 NFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 591 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
||++++.+|+.||++.+.++.+....+... .....+......|++|+++.+| +..+++|||..++.++.
T Consensus 261 NiGnp~e~Tm~elAemv~~~~~~~s~i~~~------~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr 331 (350)
T KOG1429|consen 261 NIGNPGEFTMLELAEMVKELIGPVSEIEFV------ENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFR 331 (350)
T ss_pred ccCCccceeHHHHHHHHHHHcCCCcceeec------CCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHH
Confidence 999999999999999999998655443222 1223444456789999999888 66899999999887763
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=316.12 Aligned_cols=272 Identities=15% Similarity=0.106 Sum_probs=210.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhcCCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~~~d 433 (668)
|||||||||+||||++|+++|+++|++|. ++.+|++|.+.+.+++++ +|
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~--~d 92 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN--VD 92 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC--CC
Confidence 47999999999999999999999997641 245799998888888886 59
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
+|||+|+.. ....+..++..++++|+.||.+|+++|++.++ ++||+||+.||+.....| ..| +.+..|.
T Consensus 93 ~ViHlAa~~---~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~e-~~~~~p~ 162 (348)
T PRK15181 93 YVLHQAALG---SVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLP------KIE-ERIGRPL 162 (348)
T ss_pred EEEECcccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCC------CCC-CCCCCCC
Confidence 999999977 44455677888899999999999999999998 788889999998654433 344 4455677
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh------------hHHHHhhcccceeecC-----CCcccHhhHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIP-----NSMTVLDELL 575 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~-----~~~~~v~D~a 575 (668)
+.|+.||.++|++++.|.+.++++++++|++++|||. .++.+++.+++....+ .+|+|++|+|
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a 242 (348)
T PRK15181 163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVI 242 (348)
T ss_pred ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHH
Confidence 8999999999999999877789999999999999994 2344555555544333 2899999999
Q ss_pred HHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--C
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--E 649 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~ 649 (668)
++++.++... .+++||+++++++|++|+++.+.+.++.........................+|++|+++.+| +
T Consensus 243 ~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P 322 (348)
T PRK15181 243 QANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEP 322 (348)
T ss_pred HHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCC
Confidence 9999877532 467999999999999999999999887421100000000001112222345789999999777 5
Q ss_pred ccChHHHHHHHHhccCC
Q 005949 650 LLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 650 ~~~~~~~l~~~~~~~~~ 666 (668)
..+++|+|+++++|+..
T Consensus 323 ~~sl~egl~~~~~w~~~ 339 (348)
T PRK15181 323 EFDIKEGLKQTLKWYID 339 (348)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 57999999999998754
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=305.45 Aligned_cols=309 Identities=17% Similarity=0.241 Sum_probs=220.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
..|+||||||+||||+++++.|+++ +++|++++|..... ..+... ....+++++.+|+.|.+.+.+++ .++|+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~d~ 82 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKS--LHLLSKWKEGDRLRLFRADLQEEGSFDEAV--KGCDG 82 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHH--HHHHHhhccCCeEEEEECCCCCHHHHHHHH--cCCCE
Confidence 3679999999999999999999999 67888877753211 111110 01246889999999999999988 57999
Q ss_pred EEEcCccCCccc--ccCChHH-----HHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC--cCCCCCCCC--C
Q 005949 84 IMHFAAQTHVDN--SFGNSFE-----FTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED--AVVGNHEAS--Q 152 (668)
Q Consensus 84 Vih~a~~~~~~~--~~~~~~~-----~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~e~~--~ 152 (668)
|||+|+...... ...++.. .+++|+.++.+++++|++.+.+++||++||.++||..... .....+|+. +
T Consensus 83 Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p 162 (353)
T PLN02896 83 VFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTP 162 (353)
T ss_pred EEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCc
Confidence 999999865432 2234433 4455679999999999886557899999999999854311 001123331 1
Q ss_pred -------CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCc--eeecC---
Q 005949 153 -------LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPL--PIHGD--- 218 (668)
Q Consensus 153 -------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~--~~~~~--- 218 (668)
..+.++|+.+|.++|.+++.++++++++++++||++||||+.... ..+..+... ..+... ...+.
T Consensus 163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~ 241 (353)
T PLN02896 163 IDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSP-ITGDSKLFSILSAVNS 241 (353)
T ss_pred HHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHH-hcCCcccccccccccc
Confidence 124458999999999999999988899999999999999976431 222222221 233321 11111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT 298 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 298 (668)
....++|+|++|++++++.+++.+..++.|++ ++.++++.|+++.+.+.++... ..+...+.... .....+|.++++
T Consensus 242 ~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ 318 (353)
T PLN02896 242 RMGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSN-IQVRLDEEKRG-SIPSEISSKKLR 318 (353)
T ss_pred ccCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCC-ccccccccccC-ccccccCHHHHH
Confidence 11246999999999999999987655567865 4778999999999999987431 11222222111 122457889998
Q ss_pred hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 299 SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 299 ~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
+|||+|+++++++|+++++|++++.
T Consensus 319 ~lGw~p~~~l~~~i~~~~~~~~~~~ 343 (353)
T PLN02896 319 DLGFEYKYGIEEIIDQTIDCCVDHG 343 (353)
T ss_pred HcCCCccCCHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999875
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=298.31 Aligned_cols=296 Identities=24% Similarity=0.307 Sum_probs=225.6
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--CCCCEEEE
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT--ESIDTIMH 86 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~Vih 86 (668)
|||||||||||+++++.|+++|+ .+|++++|......+.. .....+.+|+.+.+.+..+... .++|+|||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh 72 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLN-------LADLVIADYIDKEDFLDRLEKGAFGKIEAIFH 72 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhh-------hhheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence 69999999999999999999942 26888776532111111 0123567888888877766531 47999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+.... ...++...+++|+.++.+++++|++.+ + +||++||..+|+...... .+|+.+..|.+.|+.+|..+
T Consensus 73 ~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~---~e~~~~~~p~~~Y~~sK~~~ 145 (314)
T TIGR02197 73 QGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGF---REGRELERPLNVYGYSKFLF 145 (314)
T ss_pred CccccCc--cccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCc---ccccCcCCCCCHHHHHHHHH
Confidence 9997543 345677889999999999999999876 4 799999999999764322 12233345788999999999
Q ss_pred HHHHHHHHH--hcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceee------cCCCceEeceeHHHHHHH
Q 005949 167 EMLVMAYGR--SYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIH------GDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 167 E~~~~~~~~--~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~v~D~a~a 234 (668)
|.+++++.. ..+++++++|++++|||+... ..++..++..+..++.+.+. ++|.+.++|+|++|++++
T Consensus 146 e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~ 225 (314)
T TIGR02197 146 DQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDV 225 (314)
T ss_pred HHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHH
Confidence 999987543 236799999999999998643 24566677777777766654 467788999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCC--CCCcccccChHHHHh-CCCcccCCHHHH
Q 005949 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP--FNDQRYFLDDQKLTS-LGWSERTIWEEG 311 (668)
Q Consensus 235 i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~-lG~~~~~~~~~~ 311 (668)
+..+++. ..+++||+++++++|+.|+++.+.+.+|.++.......+..+ .......+|++|+++ |||.|+++++++
T Consensus 226 i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~ 304 (314)
T TIGR02197 226 NLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEG 304 (314)
T ss_pred HHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHHH
Confidence 9999987 566799999999999999999999999976532221122221 112235689999974 899999999999
Q ss_pred HHHHHHHHh
Q 005949 312 LRKTIEWYT 320 (668)
Q Consensus 312 l~~~~~~~~ 320 (668)
++++++|++
T Consensus 305 l~~~~~~~~ 313 (314)
T TIGR02197 305 VKDYVQWLL 313 (314)
T ss_pred HHHHHHHHh
Confidence 999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=289.00 Aligned_cols=256 Identities=27% Similarity=0.421 Sum_probs=205.7
Q ss_pred EEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcCc
Q 005949 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAA 89 (668)
Q Consensus 10 LVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a~ 89 (668)
|||||+||||++|+++|+++|+.++|.++++.......... ......+++++|++|++.+.+++ .++|+|||+|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~---~~~~~~~~~~~Di~d~~~l~~a~--~g~d~V~H~Aa 75 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDL---QKSGVKEYIQGDITDPESLEEAL--EGVDVVFHTAA 75 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhh---hcccceeEEEeccccHHHHHHHh--cCCceEEEeCc
Confidence 79999999999999999999755888888886543322211 11123349999999999999999 78999999999
Q ss_pred cCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCC-CCcCCCCCCCCCC--CCCChhHHHHHHH
Q 005949 90 QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD-EDAVVGNHEASQL--LPTNPYSATKAGA 166 (668)
Q Consensus 90 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~-~~~~~~~~e~~~~--~p~~~Y~~sK~~~ 166 (668)
..+... ......++++||.||++|+++|++.+ +++|||+||.+++++.. ..+....+|+.+. .+.++|+.||..+
T Consensus 76 ~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A 153 (280)
T PF01073_consen 76 PVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA 153 (280)
T ss_pred cccccC-cccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence 865432 34567899999999999999999987 99999999999998732 2333334555443 3667899999999
Q ss_pred HHHHHHHHH---h--cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 167 EMLVMAYGR---S--YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 167 E~~~~~~~~---~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
|+++++... + ..+..++|||+.||||++. .+.+.+......+......+++....+++||+|+|.|++.+++.
T Consensus 154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~--~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~ 231 (280)
T PF01073_consen 154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ--RLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQA 231 (280)
T ss_pred HHHHHhhcccccccccceeEEEEeccEEeCcccc--cccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHH
Confidence 999998764 1 2499999999999999873 45666777777776666678888899999999999999887652
Q ss_pred ---C-----CCCceEEEcCCCccc-HHHHHHHHHHHhCCCCC
Q 005949 242 ---G-----EVGHVYNVGTKKERR-VIDVAKDICKLFSMDPE 274 (668)
Q Consensus 242 ---~-----~~~~~~ni~~~~~~s-~~el~~~i~~~~g~~~~ 274 (668)
+ ..|+.|++.++++.. +.|+.+.+.+.+|.+.+
T Consensus 232 L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 232 LLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred hccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCC
Confidence 2 368899999999998 99999999999999865
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=275.66 Aligned_cols=270 Identities=17% Similarity=0.161 Sum_probs=222.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--------------------------cccccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--------------------------PFEYGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--------------------------~v~~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
.+++||||.||||++.+..+.+.-- +..++.+|+.+...+..++...+.|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 4799999999999999999887632 13677889999888888888778999999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
+|+.+ .++.+..++.++...|+.+|..|+++++..| + +++|+||+.|||+..+.. ...|.+..+|.++|
T Consensus 87 faa~t---~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~------~~~E~s~~nPtnpy 157 (331)
T KOG0747|consen 87 FAAQT---HVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDA------VVGEASLLNPTNPY 157 (331)
T ss_pred hHhhh---hhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccc------cccccccCCCCCch
Confidence 99999 7999999999999999999999999999985 4 799999999999876543 23377778888999
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCC-----CcccHhhHHHHHHHHH
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPN-----SMTVLDELLPISIEMA 582 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~ 582 (668)
+.||+++|+.+++|.+.++++++++|..|||||++ |+....++++....++ +++|++|+++++..++
T Consensus 158 AasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~ 237 (331)
T KOG0747|consen 158 AASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVL 237 (331)
T ss_pred HHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999984 4444444555444443 8999999999999999
Q ss_pred hccC-CceeeecCCCccCHHHHHHHHHhhcCCCCC-CCCCCHHHhhhhhccCCC----CCccChhHHHhhcC-CccChHH
Q 005949 583 KRNL-RGIWNFTNPGVVSHNEILEMYKKYINPEFK-WVNFTLEEQAKVIVAPRS----NNEMDASKLKKEFP-ELLSIKD 655 (668)
Q Consensus 583 ~~~~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~----~~~ld~~k~~~~~g-~~~~~~~ 655 (668)
++.. +++|||++..+.+..|+++.+.+.+.+... ....|.. ....+|+ ...+|.+|++++++ +..+|++
T Consensus 238 ~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~----~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~e 313 (331)
T KOG0747|consen 238 EKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFI----FFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEE 313 (331)
T ss_pred hcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcc----eecCCCCcccccccccHHHHHhcCCcccCcHHH
Confidence 9874 889999999999999999999998776432 1111111 1223333 34789999997777 6678999
Q ss_pred HHHHHHhccCC
Q 005949 656 SLIKYVFEPNK 666 (668)
Q Consensus 656 ~l~~~~~~~~~ 666 (668)
||+.++.++.+
T Consensus 314 GLrktie~y~~ 324 (331)
T KOG0747|consen 314 GLRKTIEWYTK 324 (331)
T ss_pred HHHHHHHHHHh
Confidence 99999998854
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=316.98 Aligned_cols=265 Identities=20% Similarity=0.239 Sum_probs=207.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccC------------------ChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE------------------DCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~------------------d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|||+||||+||||++|+++|+++|++|..+..+.. +.+.++..+. ++|+|||+|+..
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~--~~D~ViHlAa~~--- 195 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILL--EVDQIYHLACPA--- 195 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccccc--CCCEEEECceec---
Confidence 79999999999999999999999998755432110 1111122233 469999999976
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCC----CCCCCCCCcchhhHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEE----DTPNFTGSFYSKTKAM 521 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee----~~~~~~~~~Y~~sK~~ 521 (668)
....+..++..++++|+.||.+|+++|+++++++|++||+.||+.....| ..|+ ..|..|.+.|+.+|..
T Consensus 196 ~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p------~~E~~~~~~~p~~p~s~Yg~SK~~ 269 (436)
T PLN02166 196 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHP------QKETYWGNVNPIGERSCYDEGKRT 269 (436)
T ss_pred cchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCC------CCccccccCCCCCCCCchHHHHHH
Confidence 34444567888999999999999999999999999999999998654444 2232 2355667899999999
Q ss_pred HHHHHHhccCeeEeEEeeeecCCCCChh----------hHHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhccC
Q 005949 522 VEELLKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRNL 586 (668)
Q Consensus 522 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~ 586 (668)
+|++++.|.+.++++++++|++++|||+ +|+.+++++++....+ .+|+|++|+|+++..++++..
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~ 349 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH 349 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence 9999999977789999999999999995 3555666666544433 289999999999999998777
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhcc
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~ 664 (668)
.|+||+++++.+|+.|+++.+++.+|.+..+...+.. ..+.....+|++|+++++| +..+|+++|+++++++
T Consensus 350 ~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~------~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~ 423 (436)
T PLN02166 350 VGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT------ADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDF 423 (436)
T ss_pred CceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCC------CCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 8899999999999999999999999976554333211 1222345789999999878 4469999999999887
Q ss_pred C
Q 005949 665 N 665 (668)
Q Consensus 665 ~ 665 (668)
.
T Consensus 424 ~ 424 (436)
T PLN02166 424 R 424 (436)
T ss_pred H
Confidence 4
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=294.25 Aligned_cols=306 Identities=31% Similarity=0.482 Sum_probs=236.0
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
+||||||||+||+++++.|+++ +++|+++++...... ..+.......+++++.+|+.+.+.+.+++...++|+|||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSP-EALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccch-hhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 5899999999999999999998 677887765432111 1111100111577889999999999999866689999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 167 (668)
||.........++.+.++.|+.++.+++++|.+.+ +++||++||..+|+...... .+|+.+..|.+.|+.+|..+|
T Consensus 78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~---~~e~~~~~~~~~y~~sK~~~e 153 (328)
T TIGR01179 78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIP---ISEDSPLGPINPYGRSKLMSE 153 (328)
T ss_pred ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCC---ccccCCCCCCCchHHHHHHHH
Confidence 99765444455667888999999999999999876 78999999999998654332 367777778899999999999
Q ss_pred HHHHHHHHh-cCCCEEEEeeCceeCCCCC---------CCChHHHHHHHHH-cCCCceee------cCCCceEeceeHHH
Q 005949 168 MLVMAYGRS-YGLPVITTRGNNVYGPNQF---------PEKLIPKFILLAM-RGLPLPIH------GDGSNVRSYLYCED 230 (668)
Q Consensus 168 ~~~~~~~~~-~~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~i~v~D 230 (668)
.+++.++++ .+++++++||+.+|||... ...+++.+..... ....+.+. .++.+.++|+|++|
T Consensus 154 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D 233 (328)
T TIGR01179 154 RILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233 (328)
T ss_pred HHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHH
Confidence 999998776 6999999999999998532 1245555555554 33333332 35678899999999
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccC
Q 005949 231 VAEAFECILHKG---EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERT 306 (668)
Q Consensus 231 ~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~ 306 (668)
+++++..+++.. ..+++||+++++++|+.|+++.+++.+|.+.. +...+..+.......++++|++ .|||+|++
T Consensus 234 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~ 311 (328)
T TIGR01179 234 LADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFP--VELAPRRPGDPASLVADASKIRRELGWQPKY 311 (328)
T ss_pred HHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcc--eEeCCCCCccccchhcchHHHHHHhCCCCCc
Confidence 999999888642 34689999999999999999999999997654 2322333323334567999997 59999998
Q ss_pred C-HHHHHHHHHHHHhhC
Q 005949 307 I-WEEGLRKTIEWYTQN 322 (668)
Q Consensus 307 ~-~~~~l~~~~~~~~~~ 322 (668)
+ ++++|+++++|++++
T Consensus 312 ~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 312 TDLEIIIKTAWRWESRN 328 (328)
T ss_pred chHHHHHHHHHHHHhcC
Confidence 7 999999999999864
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=268.99 Aligned_cols=273 Identities=28% Similarity=0.339 Sum_probs=234.9
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
+|||||++|++|+.|++.|. . +++|+.+++. ..|++|++.+.+++.+.+||+|||+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~---------------------~~Ditd~~~v~~~i~~~~PDvVIn~ 57 (281)
T COG1091 2 KILITGANGQLGTELRRALP-G--EFEVIATDRA---------------------ELDITDPDAVLEVIRETRPDVVINA 57 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-C--CceEEeccCc---------------------cccccChHHHHHHHHhhCCCEEEEC
Confidence 49999999999999999887 3 7899998874 2899999999999988899999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 167 (668)
|++..++.++.++...+.+|..|+.+++++|++.| -++||+||..||.+....+ +.|++..+|.+.||.||.++|
T Consensus 58 AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~~---Y~E~D~~~P~nvYG~sKl~GE 132 (281)
T COG1091 58 AAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGGP---YKETDTPNPLNVYGRSKLAGE 132 (281)
T ss_pred ccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCCC---CCCCCCCCChhhhhHHHHHHH
Confidence 99999999999999999999999999999999988 7999999999998887543 488999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCce
Q 005949 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV 247 (668)
Q Consensus 168 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~ 247 (668)
..++++. -+.+|+|.+++||..+ .++...|++.+..++.+.+..| |..+.+++.|+|+++..++.....+++
T Consensus 133 ~~v~~~~----~~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~~~~~~~ 204 (281)
T COG1091 133 EAVRAAG----PRHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEKEKEGGV 204 (281)
T ss_pred HHHHHhC----CCEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhccccCcE
Confidence 9998764 5679999999999876 5888899999999999988776 888899999999999999998877779
Q ss_pred EEEcCCCcccHHHHHHHHHHHhCCCCCcc-eEeccCCCC---CCcccccChHHHHh-CCCcccCCHHHHHHHHHHH
Q 005949 248 YNVGTKKERRVIDVAKDICKLFSMDPETS-IKFVENRPF---NDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEW 318 (668)
Q Consensus 248 ~ni~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~---~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~ 318 (668)
||+++....||.|+++.|.+.++.+.... .......|. .+....+++.|+++ +|+.+. +|+++++.+++.
T Consensus 205 yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 205 YHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred EEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 99998888999999999999998665321 111111121 22346799999975 777776 899999998763
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-35 Score=288.09 Aligned_cols=275 Identities=29% Similarity=0.408 Sum_probs=209.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
||||||||+|+||++|++.|.++ +++++..+|. ..|+.|.+.+.+.+...++|+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS---------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch---------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 69999999999999999999987 7889988763 678999999999998778999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
|||...++.++.++...+++|+.++.+|+++|.+.+ .++||+||..||++....+ ++|+++.+|.+.||.+|..+
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~---y~E~d~~~P~~~YG~~K~~~ 132 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGP---YTEDDPPNPLNVYGRSKLEG 132 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSS---B-TTS----SSHHHHHHHHH
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcccc---cccCCCCCCCCHHHHHHHHH
Confidence 999999889999999999999999999999999977 6999999999998875443 47888899999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC--
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV-- 244 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~-- 244 (668)
|+.+++.. -.+.|+|++.+||+.. .+++..++..+.+++.+.+..+ +.++.+|++|+|+++..++++...
T Consensus 133 E~~v~~~~----~~~~IlR~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~~i~~l~~~~~~~~ 204 (286)
T PF04321_consen 133 EQAVRAAC----PNALILRTSWVYGPSG--RNFLRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLARVILELIEKNLSGA 204 (286)
T ss_dssp HHHHHHH-----SSEEEEEE-SEESSSS--SSHHHHHHHHHHCTSEEEEESS--CEE--EEHHHHHHHHHHHHHHHHH-G
T ss_pred HHHHHHhc----CCEEEEecceecccCC--CchhhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHHHHHHHHHhccccc
Confidence 99998754 3689999999999933 5899999999999998888665 788999999999999999987543
Q ss_pred --CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-----CCCCcccccChHHHHh-CCCcccCCHHHHHHHHH
Q 005949 245 --GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-----PFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTI 316 (668)
Q Consensus 245 --~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~ 316 (668)
.++||+++++.+|..|+++.+++.+|.+.. .+...... ...+.+..+|++|++. +|++++ +|+++|++++
T Consensus 205 ~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~-~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~ 282 (286)
T PF04321_consen 205 SPWGIYHLSGPERVSRYEFAEAIAKILGLDPE-LIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELV 282 (286)
T ss_dssp GG-EEEE---BS-EEHHHHHHHHHHHHTHCTT-EEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHH
T ss_pred ccceeEEEecCcccCHHHHHHHHHHHhCCCCc-eEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHH
Confidence 689999999999999999999999998763 23322211 1223456899999986 799997 8999999998
Q ss_pred HHH
Q 005949 317 EWY 319 (668)
Q Consensus 317 ~~~ 319 (668)
+.|
T Consensus 283 ~~~ 285 (286)
T PF04321_consen 283 KQY 285 (286)
T ss_dssp HHH
T ss_pred HHh
Confidence 754
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=284.36 Aligned_cols=274 Identities=24% Similarity=0.321 Sum_probs=220.8
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
||||||||||||++++++|+++ +++|++++|. .+|+.|.+.+.+++...++|+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS---------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc---------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899999999999999999998 6788888772 5799999999999976678999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 167 (668)
|+.........++...++.|+.++.++++++++.+ .+||++||..+|+.....+ .+|+++..|.+.|+.+|..+|
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~Ss~~vy~~~~~~~---~~E~~~~~~~~~Y~~~K~~~E 132 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGKRP---YREDDATNPLNVYGQSKLAGE 132 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeeecCCCCCC---CCCCCCCCCcchhhHHHHHHH
Confidence 99765444445667788999999999999999876 4899999999998754332 367777788889999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC-CCCc
Q 005949 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG-EVGH 246 (668)
Q Consensus 168 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~-~~~~ 246 (668)
.+++.+ +++++++||+++|||+.. .+++..++..+..++++.+.++ ++++++|++|+++++..+++.+ ..++
T Consensus 133 ~~~~~~----~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~~~~~~~~ 205 (287)
T TIGR01214 133 QAIRAA----GPNALIVRTSWLYGGGGG-RNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQRLARARG 205 (287)
T ss_pred HHHHHh----CCCeEEEEeeecccCCCC-CCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHhhccCCCC
Confidence 999765 689999999999999842 3566677777777777766554 6789999999999999999876 4678
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCc----ceEec-----cCCCCCCcccccChHHHHh-CCCcccCCHHHHHHHHH
Q 005949 247 VYNVGTKKERRVIDVAKDICKLFSMDPET----SIKFV-----ENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTI 316 (668)
Q Consensus 247 ~~ni~~~~~~s~~el~~~i~~~~g~~~~~----~~~~~-----~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~ 316 (668)
+||+++++.+|+.|+++.+.+.+|..... .+... ...........+|++|+++ ||| +..+++++|++++
T Consensus 206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~ 284 (287)
T TIGR01214 206 VYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT-PLPHWREALRAYL 284 (287)
T ss_pred eEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC-CCccHHHHHHHHH
Confidence 99999999999999999999999976421 01110 0111112345799999985 899 5569999999887
Q ss_pred H
Q 005949 317 E 317 (668)
Q Consensus 317 ~ 317 (668)
+
T Consensus 285 ~ 285 (287)
T TIGR01214 285 Q 285 (287)
T ss_pred h
Confidence 5
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=307.01 Aligned_cols=281 Identities=15% Similarity=0.106 Sum_probs=208.7
Q ss_pred CCCCCCCCcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------------------ccc
Q 005949 376 CSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------------------YGK 414 (668)
Q Consensus 376 ~~~~~~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------------------~~~ 414 (668)
..+...+||+||||||+||||++|+++|+++|++|. ++.
T Consensus 40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 344555678999999999999999999999997653 234
Q ss_pred cccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccc---ccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEe
Q 005949 415 GRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHK---TDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFE 489 (668)
Q Consensus 415 ~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~---~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~ 489 (668)
+|++|.+.+.+++++.++|+|||+|+.. ....+..++ ...+++|+.|+.+|+++|++.++ ++|++||+.|||
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~---~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG 196 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQR---SAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYG 196 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcc---cChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecC
Confidence 7889999999999988899999999876 333333333 45578999999999999999986 588899999998
Q ss_pred ecCCCCCCCCCCC-----C-CCC--CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-----------
Q 005949 490 YDAAHPEGSGIGY-----K-EED--TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN----------- 550 (668)
Q Consensus 490 ~~~~~p~~~~~~~-----~-ee~--~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~----------- 550 (668)
... .|..+ .+. . |++ .+..|.++||.||.++|.+++.|.+.++++++++|++++|||++
T Consensus 197 ~~~-~~~~E-~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~ 274 (442)
T PLN02572 197 TPN-IDIEE-GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELIN 274 (442)
T ss_pred CCC-CCCcc-cccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccccc
Confidence 532 11100 001 1 122 25567789999999999999999888899999999999999952
Q ss_pred --------------HHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhcc-CC---ceeeecCCCccCHHHHHHHH
Q 005949 551 --------------FITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRN-LR---GIWNFTNPGVVSHNEILEMY 607 (668)
Q Consensus 551 --------------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~-~~---g~~ni~~~~~~s~~e~~~~i 607 (668)
|+.+++.+++....+ .+|+||+|+|++++.++++. .. .+||+++ +.+|+.|+++.+
T Consensus 275 ~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i 353 (442)
T PLN02572 275 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLV 353 (442)
T ss_pred ccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHH
Confidence 223344454433322 29999999999999999864 23 4899987 689999999999
Q ss_pred Hhh---cCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Ccc---ChHHHHHHHHhccCC
Q 005949 608 KKY---INPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELL---SIKDSLIKYVFEPNK 666 (668)
Q Consensus 608 ~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~---~~~~~l~~~~~~~~~ 666 (668)
++. +|.+.++...+.+ ..........+|++|++++++ +.. ++.++|.+++.|++.
T Consensus 354 ~~~~~~~g~~~~~~~~p~~----~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~ 415 (442)
T PLN02572 354 TKAGEKLGLDVEVISVPNP----RVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKD 415 (442)
T ss_pred HHHHHhhCCCCCeeeCCCC----cccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 999 8876554333221 111222345679999987544 334 788999999988753
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=302.83 Aligned_cols=272 Identities=21% Similarity=0.203 Sum_probs=210.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------ccccccCChhHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------YGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------~~~~D~~d~~~~~~~l~~~~~d 433 (668)
++||||||+||||++|+++|+++|++|. ++.+|++|.+.+.+++++++||
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 4799999999999999999999998652 2347899999999999988899
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC----cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI----LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~----~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
+|||+|+.. ....+..++...+++|+.||.+|+++|++.++ +++++||+.+||.....| ..|+.+.
T Consensus 81 ~ViH~Aa~~---~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~ 150 (343)
T TIGR01472 81 EIYNLAAQS---HVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIP-------QNETTPF 150 (343)
T ss_pred EEEECCccc---ccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCC-------CCCCCCC
Confidence 999999987 34444556677778999999999999999875 678899999998654433 5566677
Q ss_pred CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-----------HHHHhhcccce-ee-----cCCCcccHh
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----------FITKISRYNKV-VN-----IPNSMTVLD 572 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----------~~~~~~~~~~~-~~-----~~~~~~~v~ 572 (668)
.|.+.|+.||..+|.+++.|.+.++++++..|++++|||+. ++.++..+... .. ...+|+|++
T Consensus 151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~ 230 (343)
T TIGR01472 151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAK 230 (343)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHH
Confidence 78899999999999999998777789999999999999851 22233334322 22 223999999
Q ss_pred hHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCC-------H-------H-HhhhhhccCCCCCc
Q 005949 573 ELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFT-------L-------E-EQAKVIVAPRSNNE 637 (668)
Q Consensus 573 D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-------~-------~-~~~~~~~~~~~~~~ 637 (668)
|+|++++.+++++..++|||++++++|++|+++.+.+.+|.+..+...+ . . ......+.+.....
T Consensus 231 D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (343)
T TIGR01472 231 DYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLL 310 (343)
T ss_pred HHHHHHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhc
Confidence 9999999999877668999999999999999999999999765321100 0 0 00000111222346
Q ss_pred cChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 638 MDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 638 ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
+|++|+++.+| +..+++++|+++++++.
T Consensus 311 ~d~~k~~~~lgw~p~~~l~egi~~~~~~~~ 340 (343)
T TIGR01472 311 GDATKAKEKLGWKPEVSFEKLVKEMVEEDL 340 (343)
T ss_pred CCHHHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence 79999999888 55799999999998764
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=279.14 Aligned_cols=314 Identities=26% Similarity=0.343 Sum_probs=249.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++.++|||||+||+|++|++.|++++...++.++|.......+...........++.+.+|+.|...+..++ .++ .
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~--~~~-~ 78 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAF--QGA-V 78 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhc--cCc-e
Confidence 3567999999999999999999999976789999998754222222111112557999999999999999998 678 8
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|+|+|+.........++...+++||.||.+++++|++.+ ++++||+||+.|+.+.......++++..+....++|+.||
T Consensus 79 Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sK 157 (361)
T KOG1430|consen 79 VVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESK 157 (361)
T ss_pred EEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHH
Confidence 888888766555556788999999999999999999988 9999999999998777653333344445545557999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc--
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK-- 241 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~-- 241 (668)
..+|+++++.....++..++|||+.||||++ ..+++.+...+..+......+++..+.+++++..++.|++.+...
T Consensus 158 a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd--~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~ 235 (361)
T KOG1430|consen 158 ALAEKLVLEANGSDDLYTCALRPPGIYGPGD--KRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALL 235 (361)
T ss_pred HHHHHHHHHhcCCCCeeEEEEccccccCCCC--ccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHH
Confidence 9999999987755579999999999999998 478889999999999888888888899999999999998765431
Q ss_pred ---C-CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEe-----------------c-c-CCCC-C-------Cccc
Q 005949 242 ---G-EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKF-----------------V-E-NRPF-N-------DQRY 290 (668)
Q Consensus 242 ---~-~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~-----------------~-~-~~~~-~-------~~~~ 290 (668)
+ ..|+.|+|.++.+....++...+.+.+|...+..+.+ . . -.|. . ....
T Consensus 236 ~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~ 315 (361)
T KOG1430|consen 236 DKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTR 315 (361)
T ss_pred hcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeecccc
Confidence 2 3689999999999988888889999999886621110 0 0 0111 1 0134
Q ss_pred ccChHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 291 FLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 291 ~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
.++.+|++ +|||.|.+++++++.+++.|.....
T Consensus 316 ~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~ 349 (361)
T KOG1430|consen 316 TFSIEKAKRELGYKPLVSLEEAIQRTIHWVASES 349 (361)
T ss_pred ccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhh
Confidence 67899997 6999999999999999999887654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=309.51 Aligned_cols=265 Identities=19% Similarity=0.240 Sum_probs=204.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccC------------------ChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE------------------DCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~------------------d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
||||||||+||||++|+++|+++|++|..+..+.. +.+.+...+. ++|+|||+|+..
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~--~~D~ViHlAa~~--- 194 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILL--EVDQIYHLACPA--- 194 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhc--CCCEEEEeeeec---
Confidence 79999999999999999999999998754321110 1111222333 469999999977
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCC----CCCCCCCCcchhhHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEE----DTPNFTGSFYSKTKAM 521 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee----~~~~~~~~~Y~~sK~~ 521 (668)
.+.....++...+++|+.++.+|+++|++.++++|++||+.||+.....| ..|+ ..|..+.+.|+.+|.+
T Consensus 195 ~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p------~~E~~~~~~~P~~~~s~Y~~SK~~ 268 (442)
T PLN02206 195 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHP------QVETYWGNVNPIGVRSCYDEGKRT 268 (442)
T ss_pred chhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCC------CCccccccCCCCCccchHHHHHHH
Confidence 33344567888999999999999999999999999999999998655444 2332 2344556889999999
Q ss_pred HHHHHHhccCeeEeEEeeeecCCCCChh----------hHHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhccC
Q 005949 522 VEELLKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRNL 586 (668)
Q Consensus 522 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~ 586 (668)
+|+++..|.+.++++++++|++++|||. .++.+++.+++....+ .+|+|++|+|++++.++++..
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~ 348 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH 348 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC
Confidence 9999999877789999999999999985 3445556655544332 279999999999999998777
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhcc
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~ 664 (668)
.|+||+++++.+|+.|+++.+++.+|.+..+...+.. ..+.....+|++|+++.+| +..+++++|+++++++
T Consensus 349 ~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~------~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~ 422 (442)
T PLN02206 349 VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT------EDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDF 422 (442)
T ss_pred CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC------CCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 8899999999999999999999999876544332211 1122345789999999888 4468999999999987
Q ss_pred C
Q 005949 665 N 665 (668)
Q Consensus 665 ~ 665 (668)
.
T Consensus 423 ~ 423 (442)
T PLN02206 423 R 423 (442)
T ss_pred H
Confidence 4
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=286.17 Aligned_cols=277 Identities=24% Similarity=0.341 Sum_probs=217.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++|+||||||+||||+++++.|+++|.+++|++++|.... ...+.......++.++.+|++|.+.+.+++ .++|+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~--~~iD~ 77 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK--QWEMQQKFPAPCLRFFIGDVRDKERLTRAL--RGVDY 77 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH--HHHHHHHhCCCcEEEEEccCCCHHHHHHHH--hcCCE
Confidence 45789999999999999999999998645789888875321 111111111246889999999999999998 57999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+||.........++...+++|+.|+.++++++.+.+ +++||++||... ..|.++|+.+|
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~-----------------~~p~~~Y~~sK 139 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKA-----------------ANPINLYGATK 139 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCC-----------------CCCCCHHHHHH
Confidence 999999865544556677899999999999999999876 789999999532 23467899999
Q ss_pred HHHHHHHHHHH---HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC-CceeecCCCceEeceeHHHHHHHHHHHH
Q 005949 164 AGAEMLVMAYG---RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGL-PLPIHGDGSNVRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 164 ~~~E~~~~~~~---~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~ai~~~~ 239 (668)
..+|.+++.++ .+++++++++||++||||++ .+++.+.+.+..+. .+++ .++.+.|+|+|++|++++++.++
T Consensus 140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~---~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al 215 (324)
T TIGR03589 140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG---SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSL 215 (324)
T ss_pred HHHHHHHHHHHhhccccCcEEEEEeecceeCCCC---CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHH
Confidence 99999998754 35689999999999999975 57888887777775 4665 46788999999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCC-cccccChHHHH-hCCCcccCCHHHHHH
Q 005949 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFND-QRYFLDDQKLT-SLGWSERTIWEEGLR 313 (668)
Q Consensus 240 ~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~k~~-~lG~~~~~~~~~~l~ 313 (668)
++...+++|+ +.+...++.|+++.+.+..+ +...+.++... ....+|.+|++ .|||.|+++++++++
T Consensus 216 ~~~~~~~~~~-~~~~~~sv~el~~~i~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 216 ERMLGGEIFV-PKIPSMKITDLAEAMAPECP------HKIVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred hhCCCCCEEc-cCCCcEEHHHHHHHHHhhCC------eeEeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 8765567784 66677999999999998643 22333344432 33568999996 599999999988875
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=297.80 Aligned_cols=276 Identities=18% Similarity=0.141 Sum_probs=211.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
|++|||||||||||++|++.|+++|+.+ .++.+|++|.+++.+++++.++|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 5799999999999999999999999752 123578999999999999877899999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHc---------CC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---------GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---------~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+||.. ....+..++..++++|+.|+.+++++|++. ++ +++++||+.+|+..... ....+|+.
T Consensus 81 ~A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-----~~~~~E~~ 152 (355)
T PRK10217 81 LAAES---HVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHST-----DDFFTETT 152 (355)
T ss_pred CCccc---CcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCC-----CCCcCCCC
Confidence 99976 444445677889999999999999999863 34 78888998999753211 11256666
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeec-----CCCcccHhhH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNI-----PNSMTVLDEL 574 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~-----~~~~~~v~D~ 574 (668)
+..|.+.|+.||.++|++++.+.+.++++++++|++++|||.. ++.++..+++.... ..+|+|++|+
T Consensus 153 ~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~ 232 (355)
T PRK10217 153 PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH 232 (355)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence 7777899999999999999998777899999999999999984 34445555443332 2389999999
Q ss_pred HHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCH------HHhhhhhccCCCCCccChhHHHhhc
Q 005949 575 LPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTL------EEQAKVIVAPRSNNEMDASKLKKEF 647 (668)
Q Consensus 575 a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~ld~~k~~~~~ 647 (668)
|++++.++++. .+++||+++++.+|+.|+++.+++.+|...+..+.+. .......+.......+|++|+++.+
T Consensus 233 a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 312 (355)
T PRK10217 233 ARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIAREL 312 (355)
T ss_pred HHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhc
Confidence 99999999876 4679999999999999999999999885332111100 0000011112234478999998887
Q ss_pred C--CccChHHHHHHHHhccCC
Q 005949 648 P--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 648 g--~~~~~~~~l~~~~~~~~~ 666 (668)
| +..+++++|+++++++..
T Consensus 313 g~~p~~~l~e~l~~~~~~~~~ 333 (355)
T PRK10217 313 GWLPQETFESGMRKTVQWYLA 333 (355)
T ss_pred CCCCcCcHHHHHHHHHHHHHh
Confidence 7 457999999999988754
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=294.87 Aligned_cols=272 Identities=14% Similarity=0.152 Sum_probs=204.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHc-CCcc-------------------cccccccC-ChhHHHHHhhhcCCCEEEEcccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKE-GIPF-------------------EYGKGRLE-DCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~-g~~v-------------------~~~~~D~~-d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
|||||||||+||||++|+++|++. |++| .++.+|++ +.+.+.+++++ +|+|||+|+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~d~ViH~aa~ 78 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKK--CDVILPLVAI 78 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcC--CCEEEECccc
Confidence 689999999999999999999986 5643 34567886 56667677765 5999999997
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC------CCCCCcc
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP------NFTGSFY 515 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~------~~~~~~Y 515 (668)
. .......+|...+++|+.++.+|+++|++.+.++|++||+.|||.....+ +.||+.+ .+|.+.|
T Consensus 79 ~---~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~------~~ee~~~~~~~~~~~p~~~Y 149 (347)
T PRK11908 79 A---TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEE------FDPEASPLVYGPINKPRWIY 149 (347)
T ss_pred C---ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcC------cCccccccccCcCCCccchH
Confidence 6 33344678888899999999999999999988899999999998644333 4555432 2456789
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh----------------hHHHHhhcccceeec-----CCCcccHhhH
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNI-----PNSMTVLDEL 574 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~-----~~~~~~v~D~ 574 (668)
+.+|.++|++++.+...++++++++|++++|||. .++..+..+++.... ..+|+|++|+
T Consensus 150 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~ 229 (347)
T PRK11908 150 ACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDG 229 (347)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHH
Confidence 9999999999999877789999999999999985 233344455543322 2279999999
Q ss_pred HHHHHHHHhcc----CCceeeecCC-CccCHHHHHHHHHhhcCCCCCCC---------CCCHHHhhhhhccCCCCCccCh
Q 005949 575 LPISIEMAKRN----LRGIWNFTNP-GVVSHNEILEMYKKYINPEFKWV---------NFTLEEQAKVIVAPRSNNEMDA 640 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~ld~ 640 (668)
+++++.+++++ .+++||++++ ..+|++|+++.+.+.+|....+. ..+.................|+
T Consensus 230 a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 309 (347)
T PRK11908 230 IDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKI 309 (347)
T ss_pred HHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCCh
Confidence 99999999864 3679999997 58999999999999998643321 1110000000001112335689
Q ss_pred hHHHhhcC--CccChHHHHHHHHhccC
Q 005949 641 SKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 641 ~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
+|+++.+| +..+++++|.+++.++.
T Consensus 310 ~k~~~~lGw~p~~~l~~~l~~~~~~~~ 336 (347)
T PRK11908 310 DNTMQELGWAPKTTMDDALRRIFEAYR 336 (347)
T ss_pred HHHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence 99999888 55799999999998764
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=288.30 Aligned_cols=285 Identities=22% Similarity=0.368 Sum_probs=217.6
Q ss_pred CCCeEEEE----cCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-cccc----CCCcCCCCeEEEEccCCCHHHHHHH
Q 005949 5 TPKNILIT----GAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNL----IPSKASSNFKFVKGDIASADLVNFL 75 (668)
Q Consensus 5 ~~~~vLVt----GgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~ 75 (668)
++++|||| |||||||++|++.|+++ +++|++++|...... .... .......+++++.+|+.| +..+
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence 35789999 99999999999999999 688888888643211 0000 001112358899999977 4444
Q ss_pred hccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 76 LITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 76 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
+...++|+|||+++. +..++.+++++|++.+ +++|||+||.++|+.....+ ..|..+..|
T Consensus 126 ~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p---~~E~~~~~p 185 (378)
T PLN00016 126 VAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPP---HVEGDAVKP 185 (378)
T ss_pred hccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCC---CCCCCcCCC
Confidence 444689999999763 1346789999999877 89999999999999765333 244444444
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
.. +|..+|.+++. .+++++++||+++|||+... .+...++..+..++++.+++++.+.++|+|++|+|+++
T Consensus 186 ~~----sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~-~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai 256 (378)
T PLN00016 186 KA----GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNK-DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMF 256 (378)
T ss_pred cc----hHHHHHHHHHH----cCCCeEEEeceeEECCCCCC-chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHH
Confidence 33 89999988753 48999999999999997642 35556677777888888888889999999999999999
Q ss_pred HHHHhcCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC---------CCCCCcccccChHHHH-hCCCcc
Q 005949 236 ECILHKGE-VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN---------RPFNDQRYFLDDQKLT-SLGWSE 304 (668)
Q Consensus 236 ~~~~~~~~-~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~k~~-~lG~~~ 304 (668)
..+++++. .+++||+++++.+|+.|+++.+.+.+|.+... +...+. .|+....+..|++|++ +|||+|
T Consensus 257 ~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i-~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p 335 (378)
T PLN00016 257 ALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEI-VHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTP 335 (378)
T ss_pred HHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCce-eecCccccCccccccccccccccccCHHHHHHhcCCCC
Confidence 99998753 57899999999999999999999999986532 111111 1222344567999997 599999
Q ss_pred cCCHHHHHHHHHHHHhhCCC
Q 005949 305 RTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~~ 324 (668)
+++++|+|+++++||+.+..
T Consensus 336 ~~~l~egl~~~~~~~~~~~~ 355 (378)
T PLN00016 336 KFDLVEDLKDRYELYFGRGR 355 (378)
T ss_pred CCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999998764
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=279.28 Aligned_cols=296 Identities=22% Similarity=0.333 Sum_probs=225.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+||||||+||||+++++.|+++ +++|++++|.... ...+ ...+++++.+|+.|.+.+.+++ .++|+|||
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~----~~~~~~~~~~D~~~~~~l~~~~--~~~d~vi~ 70 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSD--RRNL----EGLDVEIVEGDLRDPASLRKAV--AGCRALFH 70 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCcc--cccc----ccCCceEEEeeCCCHHHHHHHH--hCCCEEEE
Confidence 47999999999999999999998 6789988886422 1111 1236889999999999999988 67999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC---CChhHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP---TNPYSATK 163 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p---~~~Y~~sK 163 (668)
+|+... ....++...++.|+.++.++++++++.+ +++||++||..+|+...... ..+|+.+..| .+.|+.+|
T Consensus 71 ~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~--~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 71 VAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGT--PADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred eceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCC--CcCccCCCCcccccChHHHHH
Confidence 998643 2335677889999999999999999876 89999999999998643221 2355555544 45799999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
.++|++++.+..+++++++++||+++|||+.........++.....+..... .+ ..++|+|++|+++++..+++++.
T Consensus 146 ~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~a~~~~~~~~~ 222 (328)
T TIGR03466 146 FLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAY-VD--TGLNLVHVDDVAEGHLLALERGR 222 (328)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCcee-eC--CCcceEEHHHHHHHHHHHHhCCC
Confidence 9999999999887899999999999999986433333334444444332222 22 33689999999999999998877
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-eEe----------------ccCCCCC--------CcccccChHHHH
Q 005949 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETS-IKF----------------VENRPFN--------DQRYFLDDQKLT 298 (668)
Q Consensus 244 ~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~-~~~----------------~~~~~~~--------~~~~~~~~~k~~ 298 (668)
.+..|+++ ++.+++.|+++.+.+.+|.+.... +.. ....+.. .....+|++|++
T Consensus 223 ~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 301 (328)
T TIGR03466 223 IGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAV 301 (328)
T ss_pred CCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHH
Confidence 77789886 688999999999999999754311 100 0111110 134578999996
Q ss_pred -hCCCcccCCHHHHHHHHHHHHhhC
Q 005949 299 -SLGWSERTIWEEGLRKTIEWYTQN 322 (668)
Q Consensus 299 -~lG~~~~~~~~~~l~~~~~~~~~~ 322 (668)
.|||+|. +++++|.++++||+++
T Consensus 302 ~~lg~~p~-~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 302 RELGYRQR-PAREALRDAVEWFRAN 325 (328)
T ss_pred HHcCCCCc-CHHHHHHHHHHHHHHh
Confidence 5999996 9999999999999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=297.69 Aligned_cols=279 Identities=16% Similarity=0.180 Sum_probs=202.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHc-CCcc-------------------------cccccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKE-GIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~-g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
.||||||||+||||++|++.|+++ |++| +++.+|++|.+.+.++++++ |+||
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--d~Vi 91 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA--DLTI 91 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC--CEEE
Confidence 379999999999999999999998 4643 23457888988898888865 9999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCC---------CCCCC
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGY---------KEEDT 507 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~---------~ee~~ 507 (668)
|+|+.. .......++...+..|+.++.+|+++|++.+.++|++||+.|||.....+..+..+. .|+..
T Consensus 92 HlAa~~---~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 92 NLAAIC---TPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred Eccccc---ChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 999976 333334566677789999999999999988878889999999986432110001111 11111
Q ss_pred CC------CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-------------------HHHHhhccccee
Q 005949 508 PN------FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------------------FITKISRYNKVV 562 (668)
Q Consensus 508 ~~------~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------------------~~~~~~~~~~~~ 562 (668)
+. .+.+.|+.||.++|++++.+.+.++++++++|++++|||.. ++..++.+++..
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK 248 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence 11 24468999999999999998777899999999999999852 123344554443
Q ss_pred ecC-----CCcccHhhHHHHHHHHHhcc---CCceeeecCC-CccCHHHHHHHHHhhcCCCCC-----C--CCCCHHHhh
Q 005949 563 NIP-----NSMTVLDELLPISIEMAKRN---LRGIWNFTNP-GVVSHNEILEMYKKYINPEFK-----W--VNFTLEEQA 626 (668)
Q Consensus 563 ~~~-----~~~~~v~D~a~~~~~~~~~~---~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~-----~--~~~~~~~~~ 626 (668)
..+ .+|+|++|+|++++.+++++ .+++||++++ +.+|+.|+++.+.+.+|.... . ...+..+..
T Consensus 249 ~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 328 (386)
T PLN02427 249 LVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFY 328 (386)
T ss_pred EECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccccc
Confidence 332 27999999999999999874 3569999998 599999999999999884211 0 111111000
Q ss_pred hhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhccCC
Q 005949 627 KVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 627 ~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
.....+.....+|++|+++.+| +..+++++|++++.|+++
T Consensus 329 ~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 329 GEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred CccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence 0001122344679999999877 558999999999998753
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=242.13 Aligned_cols=292 Identities=19% Similarity=0.298 Sum_probs=240.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+++||||||+|.+|++|++.+.+.+...+=.++. ..-.+|+++.++.+++++..++.+||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------------~skd~DLt~~a~t~~lF~~ekPthVI 60 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------------GSKDADLTNLADTRALFESEKPTHVI 60 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------------ccccccccchHHHHHHHhccCCceee
Confidence 4799999999999999999999885422211111 12268999999999999989999999
Q ss_pred EcCccCCc-ccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC----CCCCCCC-hh
Q 005949 86 HFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA----SQLLPTN-PY 159 (668)
Q Consensus 86 h~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~----~~~~p~~-~Y 159 (668)
|+|+.... ......+.++++.|+.---|++..|.++| ++++|+.-|.++|.+....+. +|+ .++.|.+ .|
T Consensus 61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPI---dEtmvh~gpphpsN~gY 136 (315)
T KOG1431|consen 61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPI---DETMVHNGPPHPSNFGY 136 (315)
T ss_pred ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCC---CHHHhccCCCCCCchHH
Confidence 99997542 22234567899999999999999999998 999999999999998876654 454 3333444 69
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHH----HcCC-CceeecCCCceEeceeHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLA----MRGL-PLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~i~v~D 230 (668)
+.+|.++.-.-+.|+.++|..++..-|.++|||.+.- ..++|.++++. ..|. .+.+++.|...|+|+|++|
T Consensus 137 syAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~D 216 (315)
T KOG1431|consen 137 SYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDD 216 (315)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhH
Confidence 9999999988899999999999999999999998732 35666666554 2333 6888999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCC--cccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCC-
Q 005949 231 VAEAFECILHKGEVGHVYNVGTKK--ERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTI- 307 (668)
Q Consensus 231 ~a~ai~~~~~~~~~~~~~ni~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~- 307 (668)
+|++++.++..-..-+..+++.++ .+|++|+++++.++++..-. +.+....+....+...|++|++.|+|.|+++
T Consensus 217 LA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~--l~~DttK~DGq~kKtasnsKL~sl~pd~~ft~ 294 (315)
T KOG1431|consen 217 LADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGK--LVWDTTKSDGQFKKTASNSKLRSLLPDFKFTP 294 (315)
T ss_pred HHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCce--EEeeccCCCCCcccccchHHHHHhCCCcccCh
Confidence 999999999876666678888887 89999999999999998654 6676666767777889999999999999976
Q ss_pred HHHHHHHHHHHHhhCC
Q 005949 308 WEEGLRKTIEWYTQNP 323 (668)
Q Consensus 308 ~~~~l~~~~~~~~~~~ 323 (668)
++++|.++++||.++-
T Consensus 295 l~~ai~~t~~Wy~~Ny 310 (315)
T KOG1431|consen 295 LEQAISETVQWYLDNY 310 (315)
T ss_pred HHHHHHHHHHHHHHhH
Confidence 9999999999998763
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=291.22 Aligned_cols=269 Identities=20% Similarity=0.260 Sum_probs=206.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|||+||||+||||++++++|.++||+|. ++.+|++|.+.+...+++ +|+|||+|+...
T Consensus 22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~D~Vih~Aa~~~-- 97 (370)
T PLN02695 22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKG--VDHVFNLAADMG-- 97 (370)
T ss_pred CEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhC--CCEEEEcccccC--
Confidence 7999999999999999999999998653 233578887777777765 499999999651
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC-CCCCCCCcchhhHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED-TPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~-~~~~~~~~Y~~sK~~~E 523 (668)
.......++...+..|+.++.+|+++|++.++ ++|++||+.+|+.....+ ...++.|++ .|..|.+.|+.+|..+|
T Consensus 98 ~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~--~~~~~~E~~~~p~~p~s~Yg~sK~~~E 175 (370)
T PLN02695 98 GMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLE--TNVSLKESDAWPAEPQDAYGLEKLATE 175 (370)
T ss_pred CccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccC--cCCCcCcccCCCCCCCCHHHHHHHHHH
Confidence 11222334556678999999999999999998 677889989998643221 011244443 36678899999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh------------hHHHHhhccc-ceeec-----CCCcccHhhHHHHHHHHHhcc
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYN-KVVNI-----PNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~-~~~~~-----~~~~~~v~D~a~~~~~~~~~~ 585 (668)
++++.+.+.++++++++|++++|||. .|+..+++.. +.... ..+|+|++|++++++.++++.
T Consensus 176 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~ 255 (370)
T PLN02695 176 ELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD 255 (370)
T ss_pred HHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc
Confidence 99999877789999999999999995 2444455432 32222 228999999999999998877
Q ss_pred CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 586 LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 586 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+++||+++++.+|++|+++.+.+.+|.+.++...+.+ .......+|++|+++.+| +..+|+++|++++++
T Consensus 256 ~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~-------~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~ 328 (370)
T PLN02695 256 FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP-------EGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFW 328 (370)
T ss_pred CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC-------CCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 77899999999999999999999999876544332211 112234689999999877 446899999999988
Q ss_pred cC
Q 005949 664 PN 665 (668)
Q Consensus 664 ~~ 665 (668)
+.
T Consensus 329 ~~ 330 (370)
T PLN02695 329 IK 330 (370)
T ss_pred HH
Confidence 74
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=280.98 Aligned_cols=265 Identities=22% Similarity=0.262 Sum_probs=207.9
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccccc---ccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehh
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYG---KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTN 461 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~---~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~N 461 (668)
||+|+|||||||++++++|+++|++|..+ .+|+.+.+++.+.+++.+||+|||+|+.. ........+...+++|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~~~~~~~~n 77 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYT---DVDGAESDPEKAFAVN 77 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccc---cccccccCHHHHHHHH
Confidence 59999999999999999999999988654 36899999999999998999999999976 3443445667788999
Q ss_pred hhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeee
Q 005949 462 VAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPI 541 (668)
Q Consensus 462 v~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r 541 (668)
+.++.+++++|++.+.++|++||++||++....| +.| +.+..|.+.|+.+|..+|++++.+ +++++++|
T Consensus 78 ~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~------~~E-~~~~~~~~~Y~~~K~~~E~~~~~~----~~~~~ilR 146 (287)
T TIGR01214 78 ALAPQNLARAAARHGARLVHISTDYVFDGEGKRP------YRE-DDATNPLNVYGQSKLAGEQAIRAA----GPNALIVR 146 (287)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCC------CCC-CCCCCCcchhhHHHHHHHHHHHHh----CCCeEEEE
Confidence 9999999999999888999999999997654443 344 445566789999999999999875 56899999
Q ss_pred cCCCCChh---hHHHH----hhcccceee---cCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccCHHHHHHHHHh
Q 005949 542 SSDLNNPR---NFITK----ISRYNKVVN---IPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHNEILEMYKK 609 (668)
Q Consensus 542 ~~~~~g~~---~~~~~----~~~~~~~~~---~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~ 609 (668)
++++|||. +++.. +..+++... ...+++|++|+|+++..++++. .+|+||+++++.+|+.|+++.+++
T Consensus 147 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~ 226 (287)
T TIGR01214 147 TSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFE 226 (287)
T ss_pred eeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHH
Confidence 99999985 33333 333333222 2348899999999999999874 679999999999999999999999
Q ss_pred hcCCCCCCCCCCH----HHhhhhhccCC-CCCccChhHHHhhcC-CccChHHHHHHHHhc
Q 005949 610 YINPEFKWVNFTL----EEQAKVIVAPR-SNNEMDASKLKKEFP-ELLSIKDSLIKYVFE 663 (668)
Q Consensus 610 ~~g~~~~~~~~~~----~~~~~~~~~~~-~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~ 663 (668)
.+|.+....+.+. .......+... ....+|++|+++++| +.++|+++|.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~~~~~~~l~~~~~~ 286 (287)
T TIGR01214 227 EAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPLPHWREALRAYLQE 286 (287)
T ss_pred HhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCCccHHHHHHHHHhh
Confidence 9998754222110 00000111112 345789999999988 678999999999875
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=290.90 Aligned_cols=267 Identities=21% Similarity=0.187 Sum_probs=209.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhcCCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
|+||||||+||||+++++.|+++|++|. ++.+|++|.+++.++++.++||+
T Consensus 7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 86 (340)
T PLN02653 7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDE 86 (340)
T ss_pred CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCE
Confidence 6899999999999999999999998652 23478999999999999888999
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC------cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI------LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~------~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+|+.. .+.....++...+++|+.|+.+|+++|+++++ ++|+.||+++||.... | .+|+.+
T Consensus 87 Vih~A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~-------~~E~~~ 155 (340)
T PLN02653 87 VYNLAAQS---HVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-P-------QSETTP 155 (340)
T ss_pred EEECCccc---chhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-C-------CCCCCC
Confidence 99999976 34444567777889999999999999999875 5778888899986543 3 456667
Q ss_pred CCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---H--------HHHhhcccceeec-C-----CCcccH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---F--------ITKISRYNKVVNI-P-----NSMTVL 571 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---~--------~~~~~~~~~~~~~-~-----~~~~~v 571 (668)
..|.+.|+.||.++|++++.|.+.++++++..|++++|||+. + +.++..+.+.... + .+|+|+
T Consensus 156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v 235 (340)
T PLN02653 156 FHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFA 235 (340)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeH
Confidence 778899999999999999998777888889999999999841 2 2233344332221 2 389999
Q ss_pred hhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCC-CCCCHHHhhhhhccCCCCCccChhHHHhhcC--
Q 005949 572 DELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKW-VNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-- 648 (668)
Q Consensus 572 ~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-- 648 (668)
+|+|++++.++++..++.||+++++++|+.|+++.+.+.+|.+... ..+... ...+.......+|++|+++.+|
T Consensus 236 ~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~d~~k~~~~lgw~ 312 (340)
T PLN02653 236 GDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPR---YFRPAEVDNLKGDASKAREVLGWK 312 (340)
T ss_pred HHHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcc---cCCccccccccCCHHHHHHHhCCC
Confidence 9999999999987767899999999999999999999999864210 001000 0112223345689999999877
Q ss_pred CccChHHHHHHHHhcc
Q 005949 649 ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 649 ~~~~~~~~l~~~~~~~ 664 (668)
+..++++||+++++++
T Consensus 313 p~~~l~~gi~~~~~~~ 328 (340)
T PLN02653 313 PKVGFEQLVKMMVDED 328 (340)
T ss_pred CCCCHHHHHHHHHHHH
Confidence 5568999999999864
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=272.15 Aligned_cols=232 Identities=37% Similarity=0.657 Sum_probs=201.8
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFA 88 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 88 (668)
|||||||||||+++++.|+++ ++.|+.+.+.......... ..+++++.+|+.|.+.+.+++...++|+|||+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~-----~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEK-----KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHH-----HTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccc-----cceEEEEEeeccccccccccccccCceEEEEee
Confidence 799999999999999999999 6778777776532221111 127899999999999999999777889999999
Q ss_pred ccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHH
Q 005949 89 AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 168 (668)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 168 (668)
+.........+....++.|+.++.+++++|++.+ +++||++||..+|+.....+ .+|+.+..|.++|+.+|...|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~---~~e~~~~~~~~~Y~~~K~~~e~ 149 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEP---IDEDSPINPLSPYGASKRAAEE 149 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSS---BETTSGCCHSSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc-cccccccccccccccccccc---cccccccccccccccccccccc
Confidence 9865333446778899999999999999999988 69999999999999984433 3677777889999999999999
Q ss_pred HHHHHHHhcCCCEEEEeeCceeCCC---CCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-C
Q 005949 169 LVMAYGRSYGLPVITTRGNNVYGPN---QFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244 (668)
Q Consensus 169 ~~~~~~~~~~~~~~ilR~~~v~G~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~ 244 (668)
+++.+.++++++++++||+++|||. .....+++.++..+.+++++.+++++.++|+|+|++|+|++++.+++++. .
T Consensus 150 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 229 (236)
T PF01370_consen 150 LLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAA 229 (236)
T ss_dssp HHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCC
Confidence 9999998889999999999999999 55568999999999999999999999999999999999999999999988 7
Q ss_pred CceEEEc
Q 005949 245 GHVYNVG 251 (668)
Q Consensus 245 ~~~~ni~ 251 (668)
+++||++
T Consensus 230 ~~~yNig 236 (236)
T PF01370_consen 230 GGIYNIG 236 (236)
T ss_dssp TEEEEES
T ss_pred CCEEEeC
Confidence 8999986
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-34 Score=288.01 Aligned_cols=266 Identities=12% Similarity=0.138 Sum_probs=196.9
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcccc--------------cccccCChhHHHHHhhh-------cCCCEEEEcccccCC
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPFEY--------------GKGRLEDCSSLIADVQS-------VKPTHVFNAAGVTGR 444 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v~~--------------~~~D~~d~~~~~~~l~~-------~~~d~Vih~a~~~~~ 444 (668)
||||||+||||++|+++|+++|+++.. ..+|+.|..+.++.++. .+||+|||+||..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~-- 79 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACS-- 79 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceec--
Confidence 899999999999999999999985322 22345444333333322 1689999999965
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
... ..++..+++.|+.++.+|+++|++.++++++.||+.+|+.....+ .+|+.+..|.+.|+.||.++|+
T Consensus 80 -~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~ 149 (308)
T PRK11150 80 -STT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDF-------IEEREYEKPLNVYGYSKFLFDE 149 (308)
T ss_pred -CCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCC-------CccCCCCCCCCHHHHHHHHHHH
Confidence 221 224556789999999999999999999999999999997653322 5666677777999999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChhh------------HHHHhhcccceeec------CCCcccHhhHHHHHHHHHhccC
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNI------PNSMTVLDELLPISIEMAKRNL 586 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~------~~~~~~v~D~a~~~~~~~~~~~ 586 (668)
+++.+....+++++++|++++|||+. +..++.++...... ..+|+|++|+|++++.++++..
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~ 229 (308)
T PRK11150 150 YVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV 229 (308)
T ss_pred HHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC
Confidence 99998766789999999999999862 12345544432222 1278999999999999998777
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcCC-c-cChHHHHHHHHhcc
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE-L-LSIKDSLIKYVFEP 664 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g~-~-~~~~~~l~~~~~~~ 664 (668)
+|+||+++++.+|+.|+++.+.+.+|.. .+...+.+.. ..........+|++|++++++. . .+|+++|+++++|+
T Consensus 230 ~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~ 306 (308)
T PRK11150 230 SGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDK--LKGRYQAFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWL 306 (308)
T ss_pred CCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccc--cccccceecccCHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 7899999999999999999999998842 1111111110 0001112346899999987443 3 58999999999998
Q ss_pred CC
Q 005949 665 NK 666 (668)
Q Consensus 665 ~~ 666 (668)
++
T Consensus 307 ~~ 308 (308)
T PRK11150 307 NR 308 (308)
T ss_pred hC
Confidence 63
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=290.39 Aligned_cols=279 Identities=16% Similarity=0.144 Sum_probs=210.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-c------------------------cccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-F------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-v------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
||||||||+||||++|++.|+++|+. + .++.+|++|.+++.++++..++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 68999999999999999999999864 1 1346799999999999988778999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHc---------CC-cEEEEecceeEeecCCCC--C-CCCCCCCCC
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---------GI-LMMNYATGCIFEYDAAHP--E-GSGIGYKEE 505 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---------~~-~~v~~sS~~vy~~~~~~p--~-~~~~~~~ee 505 (668)
||.. .......++..++++|+.|+.+++++|+++ ++ +++++||+++|+...... . ....+..+|
T Consensus 81 A~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 81 AAES---HVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred Cccc---CCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence 9976 333344567889999999999999999874 33 788999999997532100 0 001123566
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeec-----CCCcccHh
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNI-----PNSMTVLD 572 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~-----~~~~~~v~ 572 (668)
+.+..|.+.|+.||.++|++++.+.+.++++++++|++++|||.. ++..+..++..... ..+++|++
T Consensus 158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (352)
T PRK10084 158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (352)
T ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHH
Confidence 677788899999999999999998777899999999999999973 22334444333322 23899999
Q ss_pred hHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHh---hhhhccCCCCCccChhHHHhhcC
Q 005949 573 ELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQ---AKVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 573 D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~ld~~k~~~~~g 648 (668)
|+|++++.++++. .+++||+++++.+|+.|+++.+++.+|...+. ..+.... ....+.......+|++|+++.+|
T Consensus 238 D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg 316 (352)
T PRK10084 238 DHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPK-ATSYREQITYVADRPGHDRRYAIDASKISRELG 316 (352)
T ss_pred HHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhcccccc-ccchhhhccccccCCCCCceeeeCHHHHHHHcC
Confidence 9999999999865 56899999999999999999999999864321 1111100 00111112234689999999777
Q ss_pred --CccChHHHHHHHHhccCC
Q 005949 649 --ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 649 --~~~~~~~~l~~~~~~~~~ 666 (668)
+..+++++|.+++.++.+
T Consensus 317 ~~p~~~l~~~l~~~~~~~~~ 336 (352)
T PRK10084 317 WKPQETFESGIRKTVEWYLA 336 (352)
T ss_pred CCCcCCHHHHHHHHHHHHHh
Confidence 447999999999988753
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=284.50 Aligned_cols=295 Identities=17% Similarity=0.195 Sum_probs=211.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCc----CCCCeEEEEccCCCHHHHHHHhc
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSK----ASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
.+++|+||||||+||||+++++.|+++ +++|+++.|.... ..+..+.... ...++.++.+|++|.+.+.+++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i- 126 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF- 126 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH-
Confidence 466889999999999999999999999 6778766553211 1111110000 0125788999999999999998
Q ss_pred cCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCc--cccCCCC-CCcCCCCCCC----
Q 005949 78 TESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD--EVYGETD-EDAVVGNHEA---- 150 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~--~vyg~~~-~~~~~~~~e~---- 150 (668)
.++|+|||+|+...............+.|+.++.+++++|++...+++||++||. .+|+... .......+|+
T Consensus 127 -~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~ 205 (367)
T PLN02686 127 -DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD 205 (367)
T ss_pred -HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence 5799999999976432211122355678999999999999986348999999995 5787421 1100111232
Q ss_pred --CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 151 --SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 151 --~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
.+..|.++|+.+|..+|.+++.++++++++++++||++||||+....... .+. ....+. ..+.+++ .++|+||
T Consensus 206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~-~~~-~~~~g~-~~~~g~g--~~~~v~V 280 (367)
T PLN02686 206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST-ATI-AYLKGA-QEMLADG--LLATADV 280 (367)
T ss_pred hhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh-hHH-HHhcCC-CccCCCC--CcCeEEH
Confidence 23446678999999999999999888899999999999999986432211 122 334443 4455554 3579999
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-CCCCcccccChHHHH-hCCCc
Q 005949 229 EDVAEAFECILHKG---EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-PFNDQRYFLDDQKLT-SLGWS 303 (668)
Q Consensus 229 ~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~~-~lG~~ 303 (668)
+|+++|++.+++.. ..+++| +++++.+++.|+++.+.+.+|.+.. +...+.+ +.....+.+|++|++ .|||.
T Consensus 281 ~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~d~~~~~~d~~kl~~~l~~~ 357 (367)
T PLN02686 281 ERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN--KIAGNSSSDDTPARFELSNKKLSRLMSRT 357 (367)
T ss_pred HHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC--cCCCchhhcCCcccccccHHHHHHHHHHh
Confidence 99999999999852 356688 7778999999999999999987643 2223333 455667889999997 59999
Q ss_pred ccCCHH
Q 005949 304 ERTIWE 309 (668)
Q Consensus 304 ~~~~~~ 309 (668)
|+-.++
T Consensus 358 ~~~~~~ 363 (367)
T PLN02686 358 RRCCYD 363 (367)
T ss_pred hhcccc
Confidence 985443
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=266.25 Aligned_cols=253 Identities=28% Similarity=0.394 Sum_probs=191.3
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc----CCCCeE----EEEccCCCHHHHHHHhccCC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK----ASSNFK----FVKGDIASADLVNFLLITES 80 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~----~~~~Dl~d~~~~~~~~~~~~ 80 (668)
||||||+|.||+.|+++|++.+ ..+++++|+... .+..+..+. ...++. .+.+|++|.+.+.++++..+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~-p~~lil~d~~E~--~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~ 77 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYG-PKKLILFDRDEN--KLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYK 77 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HH--HHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T
T ss_pred CEEEccccHHHHHHHHHHHhcC-CCeEEEeCCChh--HHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcC
Confidence 7999999999999999999985 468999999753 222222221 223343 45899999999999998789
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|+|||+||..+++.++.+|.+.+++|+.||+|++++|.+++ +++||++||+.+ .+|.+.||
T Consensus 78 pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKA-----------------v~PtnvmG 139 (293)
T PF02719_consen 78 PDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKA-----------------VNPTNVMG 139 (293)
T ss_dssp -SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC-----------------SS--SHHH
T ss_pred CCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEcccccc-----------------CCCCcHHH
Confidence 999999999999999999999999999999999999999987 999999999765 45788999
Q ss_pred HHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
++|..+|.++..+.... +..++++|+|+|.|..+ +++|.|.+++.+|+++.+ .++..+|-|+.++++++.++.
T Consensus 140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G---SVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~ 215 (293)
T PF02719_consen 140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG---SVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQ 215 (293)
T ss_dssp HHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT---SCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC---cHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHH
Confidence 99999999999987654 68999999999999887 899999999999999988 667789999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCC----CcceEeccCCCCC
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDP----ETSIKFVENRPFN 286 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~----~~~~~~~~~~~~~ 286 (668)
+......|++|.+-.|.++++.|+++.+.+..|..+ ...+.+...+|.+
T Consensus 216 a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlRpGE 268 (293)
T PF02719_consen 216 AAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLRPGE 268 (293)
T ss_dssp HHHH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----TT-
T ss_pred HHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCCCCc
Confidence 998888899999999999999999999999998643 3456666666643
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=245.81 Aligned_cols=312 Identities=25% Similarity=0.285 Sum_probs=253.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccc--cCC--CcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKN--LIP--SKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~--~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
++|+.||||-||+-|+.|++.|+++ |++|.++.|+........ +.. .....+++++.+|++|...+.++++..+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 3579999999999999999999999 788887777643333222 222 2233458999999999999999998899
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCC-CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChh
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ-IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 159 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 159 (668)
+|-|+|+||++++..+++.|....+++..||.+|+|+.+..+. -.||...||+..||.-...+. .|.+|..|.+||
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq---~E~TPFyPrSPY 155 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQ---KETTPFYPRSPY 155 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCcc---ccCCCCCCCCHH
Confidence 9999999999999999999999999999999999999998774 469999999999998765544 899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHHcCCCc-eeecCCCceEeceeHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMRGLPL-PIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~ai 235 (668)
+.+|..+--+..+|.+.+|+-.+.=++.+-=+|.....-+ +..-+.++..|..- ...++-+..|+|-|..|.++++
T Consensus 156 AvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 156 AVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 9999999999999999999999988888877886644333 33333344444332 2358889999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCC-----------------cceEecc--CCCCCCcccccChHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE-----------------TSIKFVE--NRPFNDQRYFLDDQK 296 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~-----------------~~~~~~~--~~~~~~~~~~~~~~k 296 (668)
+.+++++. ...|+++.|+..|++|+++...+..|.+.. ..+.+.+ -+|.+..-..-|.+|
T Consensus 236 wlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~K 314 (345)
T COG1089 236 WLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTK 314 (345)
T ss_pred HHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHH
Confidence 99999886 468999999999999999999999985533 1122222 244445556789999
Q ss_pred HH-hCCCcccCCHHHHHHHHHHHHhhC
Q 005949 297 LT-SLGWSERTIWEEGLRKTIEWYTQN 322 (668)
Q Consensus 297 ~~-~lG~~~~~~~~~~l~~~~~~~~~~ 322 (668)
++ +|||+|+++++|.+++|+++..+.
T Consensus 315 A~~~LGW~~~~~~~elv~~Mv~~dl~~ 341 (345)
T COG1089 315 AKEKLGWRPEVSLEELVREMVEADLEA 341 (345)
T ss_pred HHHHcCCccccCHHHHHHHHHHHHHHH
Confidence 98 699999999999999999876653
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=272.46 Aligned_cols=260 Identities=27% Similarity=0.368 Sum_probs=225.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
...+|+||||||+|.||+.+++++++.+ .-+++++++.+...- ...+........+.++.||+.|.+.+..++...+
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~-p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFN-PKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcC-CCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 3468999999999999999999999985 568888888754211 1111111124578999999999999999998888
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|+|||+||..+++.++.+|.+.+++||.||.|++++|.+++ +++||++||+.+ .+|.|.||
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKA-----------------V~PtNvmG 387 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKA-----------------VNPTNVMG 387 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcc-----------------cCCchHhh
Confidence 999999999999999999999999999999999999999988 999999999765 67899999
Q ss_pred HHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
++|..+|..+.++..+. +..++++|+|||.|..+ +++|.|.+++.+|+++++ .++.-+|-|+.+.++++.++.
T Consensus 388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG---SViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlq 463 (588)
T COG1086 388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQ 463 (588)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC---CCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHH
Confidence 99999999999987643 38999999999999987 899999999999999998 788899999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCC--cceEeccCCCC
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE--TSIKFVENRPF 285 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~ 285 (668)
+......|++|.+..|+++++.|+++.+.+..|..+. ..+.+.+.+|.
T Consensus 464 A~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpG 513 (588)
T COG1086 464 AGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPG 513 (588)
T ss_pred HHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCc
Confidence 9988888999999999999999999999999985443 34666666664
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=256.83 Aligned_cols=268 Identities=18% Similarity=0.217 Sum_probs=218.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------------cccccccCChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------------EYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
++||||||+||||+|.+-+|+++||+| .++.+|++|.+.++++++..++|.|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 589999999999999999999999953 57789999999999999999999999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
|+|+.. .+..+..+|..++.+|+.||.+||++|+++++ .+++.||+.|||.+...| +.|++....|.++|
T Consensus 83 Hfa~~~---~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip------~te~~~t~~p~~py 153 (343)
T KOG1371|consen 83 HFAALA---AVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVP------ITEEDPTDQPTNPY 153 (343)
T ss_pred eehhhh---ccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceee------ccCcCCCCCCCCcc
Confidence 999988 78889999999999999999999999999998 566667778999887776 55665544588999
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCC--hh------------hHH---HHhhccc--ceeecCC----------
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNN--PR------------NFI---TKISRYN--KVVNIPN---------- 566 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g--~~------------~~~---~~~~~~~--~~~~~~~---------- 566 (668)
|.+|.+.|+++..+...+.+.++.+|.++++| |. +++ .++..+. ....++.
T Consensus 154 g~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~v 233 (343)
T KOG1371|consen 154 GKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIV 233 (343)
T ss_pred hhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCee
Confidence 99999999999999888889999999999999 42 111 1111111 1111111
Q ss_pred -CcccHhhHHHHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 567 -SMTVLDELLPISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 567 -~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
+++|+-|+|+.++.++.+. ..++||++++...|..+|+.++++.+|.++++..++ .+..+......+.+
T Consensus 234 rdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~------~R~gdv~~~ya~~~ 307 (343)
T KOG1371|consen 234 RDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP------RRNGDVAFVYANPS 307 (343)
T ss_pred ecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC------CCCCCceeeeeChH
Confidence 6777889999999999864 346999999999999999999999999987753332 12344445677888
Q ss_pred HHHhhcC--CccChHHHHHHHHhccCC
Q 005949 642 KLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 642 k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
++++.+| +...+++.++++.+|..+
T Consensus 308 ~a~~elgwk~~~~iee~c~dlw~W~~~ 334 (343)
T KOG1371|consen 308 KAQRELGWKAKYGLQEMLKDLWRWQKQ 334 (343)
T ss_pred HHHHHhCCccccCHHHHHHHHHHHHhc
Confidence 8887777 557799999999998753
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=280.69 Aligned_cols=266 Identities=14% Similarity=0.130 Sum_probs=197.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEE
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
++|+|+||||+||||+++++.|+++|++|. ++.+|++|.+++.++++++ |+||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~Vi 86 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGC--DGVF 86 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC--CEEE
Confidence 357899999999999999999999998651 2456888888888888875 9999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecc-eeEeecCCCCCCCCCCCCCCC-----CCC
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATG-CIFEYDAAHPEGSGIGYKEED-----TPN 509 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~-----~~~ 509 (668)
|+|+.. ..++...+++|+.|+.+++++|++.++ ++|++||. .+|+.....+ ..++.|++ .+.
T Consensus 87 h~A~~~--------~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~---~~~~~E~~~~~~~~~~ 155 (342)
T PLN02214 87 HTASPV--------TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDP---EAVVDESCWSDLDFCK 155 (342)
T ss_pred EecCCC--------CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCC---CcccCcccCCChhhcc
Confidence 999955 235678899999999999999999998 57777775 5776432221 11123332 234
Q ss_pred CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhH------HH---Hhhcccce--eecCCCcccHhhHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNF------IT---KISRYNKV--VNIPNSMTVLDELLPIS 578 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~------~~---~~~~~~~~--~~~~~~~~~v~D~a~~~ 578 (668)
.|.+.|+.||.++|++++.|.+.++++++++|++++|||... +. .++.+... .....+|+|++|+|+++
T Consensus 156 ~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~ 235 (342)
T PLN02214 156 NTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAH 235 (342)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHH
Confidence 466889999999999999987777999999999999999621 11 22223221 12234899999999999
Q ss_pred HHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcCCccChHHH
Q 005949 579 IEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDS 656 (668)
Q Consensus 579 ~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g~~~~~~~~ 656 (668)
+.+++++ .+|.||+++ +.+++.|+++.+++.++. +++.... ...........+|++|++++++.+.+++|+
T Consensus 236 ~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~k~~~LG~~p~~lee~ 308 (342)
T PLN02214 236 VLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCK------DEKNPRAKPYKFTNQKIKDLGLEFTSTKQS 308 (342)
T ss_pred HHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCc------cccCCCCCccccCcHHHHHcCCcccCHHHH
Confidence 9999876 568999988 578999999999999852 2111000 001112234468999998744466899999
Q ss_pred HHHHHhccCCC
Q 005949 657 LIKYVFEPNKK 667 (668)
Q Consensus 657 l~~~~~~~~~~ 667 (668)
|+++++++.+.
T Consensus 309 i~~~~~~~~~~ 319 (342)
T PLN02214 309 LYDTVKSLQEK 319 (342)
T ss_pred HHHHHHHHHHc
Confidence 99999998543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=280.95 Aligned_cols=266 Identities=20% Similarity=0.183 Sum_probs=204.7
Q ss_pred EEEcCCcchhHHHHHHHHHcCCccc----ccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhh
Q 005949 387 LIYGRTGWIGGLLGKLCEKEGIPFE----YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNV 462 (668)
Q Consensus 387 li~G~~G~iG~~l~~~l~~~g~~v~----~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv 462 (668)
||||||||||++|++.|++.|+.+. ...+|++|.+++.++++..+||+|||||+... ....+..++..+++.|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~~~~~~~n~ 78 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVILAAAKVG--GIHANMTYPADFIRENL 78 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhccCCCEEEEeeeeec--ccchhhhCcHHHHHHHh
Confidence 6999999999999999999998753 34689999999999999888999999999761 12334567788899999
Q ss_pred hhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC---CCCCCCC-cchhhHHHHHHHHHhccCeeEeEE
Q 005949 463 AGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED---TPNFTGS-FYSKTKAMVEELLKEYDNVCTLRV 537 (668)
Q Consensus 463 ~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~---~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~l~~ 537 (668)
.++.+|+++|+++++ ++|++||+.||+.....| +.|++ .+..|.+ .|+.||.++|++++.+.+.+++++
T Consensus 79 ~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~------~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 152 (306)
T PLN02725 79 QIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQP------IPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDA 152 (306)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCC------CCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCE
Confidence 999999999999998 688999999998654443 33333 1333433 599999999999988877779999
Q ss_pred eeeecCCCCChhh------------HHHHh----hcccceee-cC-----CCcccHhhHHHHHHHHHhcc-CCceeeecC
Q 005949 538 RMPISSDLNNPRN------------FITKI----SRYNKVVN-IP-----NSMTVLDELLPISIEMAKRN-LRGIWNFTN 594 (668)
Q Consensus 538 ~~~r~~~~~g~~~------------~~~~~----~~~~~~~~-~~-----~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~ 594 (668)
+++|++++|||.. ++..+ ..+.+... .+ .+++|++|++++++.++++. ..+.||+++
T Consensus 153 ~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~~~~~ni~~ 232 (306)
T PLN02725 153 ISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEHVNVGS 232 (306)
T ss_pred EEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccccCcceEeCC
Confidence 9999999999952 22221 22222222 11 28999999999999999865 567899999
Q ss_pred CCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCC
Q 005949 595 PGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 595 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~ 666 (668)
++.+|+.|+++.+++.++.+..+...+. .........+|++|++++++ +..+|+++|.+++.++.+
T Consensus 233 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 299 (306)
T PLN02725 233 GDEVTIKELAELVKEVVGFEGELVWDTS------KPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLE 299 (306)
T ss_pred CCcccHHHHHHHHHHHhCCCCceeecCC------CCCcccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999987654322111 11223345789999987544 446999999999987753
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=306.15 Aligned_cols=273 Identities=12% Similarity=0.142 Sum_probs=204.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHc-CCcc-------------------cccccccCChhH-HHHHhhhcCCCEEEEcccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKE-GIPF-------------------EYGKGRLEDCSS-LIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~-g~~v-------------------~~~~~D~~d~~~-~~~~l~~~~~d~Vih~a~~ 441 (668)
+||||||||+||||++|+++|+++ ||+| +++.+|++|... +.+++++ +|+|||+||.
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~--~D~ViHlAa~ 392 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKK--CDVVLPLVAI 392 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcC--CCEEEECccc
Confidence 469999999999999999999985 6754 345678887654 4666765 5999999997
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCC-----CC-CCCCcc
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDT-----PN-FTGSFY 515 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~-----~~-~~~~~Y 515 (668)
. .......++...+++|+.++.+++++|++++.++||+||+.+||.....+ +.|++. |. .|.+.|
T Consensus 393 ~---~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~------~~E~~~~~~~~p~~~p~s~Y 463 (660)
T PRK08125 393 A---TPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKY------FDEDTSNLIVGPINKQRWIY 463 (660)
T ss_pred c---CchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCC------cCccccccccCCCCCCccch
Confidence 7 34444567778899999999999999999988888999999998643333 333321 11 345789
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh----------------HHHHhhcccceeecC-----CCcccHhhH
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN----------------FITKISRYNKVVNIP-----NSMTVLDEL 574 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~----------------~~~~~~~~~~~~~~~-----~~~~~v~D~ 574 (668)
+.||.++|++++.|.+.++++++++|++++|||++ ++.++..+++....+ .+|+|++|+
T Consensus 464 g~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dv 543 (660)
T PRK08125 464 SVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDG 543 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHH
Confidence 99999999999999877899999999999999952 334444444433222 389999999
Q ss_pred HHHHHHHHhcc----CCceeeecCCC-ccCHHHHHHHHHhhcCCCCCCCCCCHHHhhh---------hhccCCCCCccCh
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPG-VVSHNEILEMYKKYINPEFKWVNFTLEEQAK---------VIVAPRSNNEMDA 640 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~ld~ 640 (668)
|++++.++++. .+++||+++++ .+|++|+++.+.+.+|.......++...... ....+.....+|+
T Consensus 544 a~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (660)
T PRK08125 544 IEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI 623 (660)
T ss_pred HHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCCh
Confidence 99999999864 25699999985 7999999999999998642211111110000 0001222446799
Q ss_pred hHHHhhcC--CccChHHHHHHHHhccCC
Q 005949 641 SKLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 641 ~k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
+|+++.+| +..+++++|++++.++.+
T Consensus 624 ~ka~~~LGw~P~~~lee~l~~~i~~~~~ 651 (660)
T PRK08125 624 RNARRLLDWEPKIDMQETIDETLDFFLR 651 (660)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHh
Confidence 99999888 557999999999998764
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=281.79 Aligned_cols=268 Identities=19% Similarity=0.215 Sum_probs=205.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
|+||||||+||||+++++.|+++|++|. ++.+|++|.+++.++++..+||+|||+|+
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~ 84 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAA 84 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECCc
Confidence 6899999999999999999999998652 35678999999999999888999999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCC-CCCCCCCCCCCCCCCCCCCCcchh
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAA-HPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~-~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
.. .+..+..++...+++|+.++.+++++|++.+ + ++|++||+.+|+.... .| .+|+.+..|.+.|+.
T Consensus 85 ~~---~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~-------~~e~~~~~p~~~Y~~ 154 (349)
T TIGR02622 85 QP---LVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWG-------YRETDPLGGHDPYSS 154 (349)
T ss_pred cc---ccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCC-------CccCCCCCCCCcchh
Confidence 76 4455566788899999999999999999876 5 6888899899975422 12 455566677899999
Q ss_pred hHHHHHHHHHhccCee-------EeEEeeeecCCCCChh---------hHHHHhhcccceeec----CCCcccHhhHHHH
Q 005949 518 TKAMVEELLKEYDNVC-------TLRVRMPISSDLNNPR---------NFITKISRYNKVVNI----PNSMTVLDELLPI 577 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~-------~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~----~~~~~~v~D~a~~ 577 (668)
||.++|.+++.+.+.+ +++++++|++++|||. .++..+..+...... ..+|+|++|+|++
T Consensus 155 sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a 234 (349)
T TIGR02622 155 SKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSG 234 (349)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHH
Confidence 9999999998875432 8999999999999985 233344444443322 2389999999999
Q ss_pred HHHHHhc------cCCceeeecCC--CccCHHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC
Q 005949 578 SIEMAKR------NLRGIWNFTNP--GVVSHNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 578 ~~~~~~~------~~~g~~ni~~~--~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g 648 (668)
++.++++ ..+++|||+++ +++|+.|+++.+.+.++. ++.+...+. ...........+|++|+++.+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lg 310 (349)
T TIGR02622 235 YLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD----LNHPHEARLLKLDSSKARTLLG 310 (349)
T ss_pred HHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC----CCCCcccceeecCHHHHHHHhC
Confidence 9988764 13679999985 799999999999887653 322211100 0111222345789999999777
Q ss_pred --CccChHHHHHHHHhccC
Q 005949 649 --ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 649 --~~~~~~~~l~~~~~~~~ 665 (668)
+..+++++|++++.|+.
T Consensus 311 w~p~~~l~~gi~~~i~w~~ 329 (349)
T TIGR02622 311 WHPRWGLEEAVSRTVDWYK 329 (349)
T ss_pred CCCCCCHHHHHHHHHHHHH
Confidence 55699999999998874
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=261.93 Aligned_cols=272 Identities=17% Similarity=0.180 Sum_probs=200.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhcCCCEE
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSVKPTHV 435 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~~~d~V 435 (668)
++|+|||||||||||++|++.|+++||.| .++..|+.|++++.+++++| |.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc--dgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC--DGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC--CEE
Confidence 45799999999999999999999999954 56778999999999999998 999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecc--eeEeecCCCCCCCCCCCCCCC-----C
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATG--CIFEYDAAHPEGSGIGYKEED-----T 507 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~--~vy~~~~~~p~~~~~~~~ee~-----~ 507 (668)
||+|... ... ......+.++.++.||.|+|++|++.. +++|+++|| .+.+..+.. ++...+.|+. -
T Consensus 83 fH~Asp~---~~~-~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~--~~~~vvdE~~wsd~~~ 156 (327)
T KOG1502|consen 83 FHTASPV---DFD-LEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNI--GENSVVDEESWSDLDF 156 (327)
T ss_pred EEeCccC---CCC-CCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCC--CCCcccccccCCcHHH
Confidence 9999966 222 222344789999999999999999998 766666555 333321211 1122233322 1
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---------hHHHHhhcccc--eeecCCCcccHhhHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NFITKISRYNK--VVNIPNSMTVLDELLP 576 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~--~~~~~~~~~~v~D~a~ 576 (668)
.......|..||.++|+.+|++.+..++.++.+.|+.|+||. ..+..+++|.. .......|+|++|+|.
T Consensus 157 ~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~ 236 (327)
T KOG1502|consen 157 CRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVAL 236 (327)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHH
Confidence 122237899999999999999988789999999999999997 23333444422 2223335899999999
Q ss_pred HHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChH
Q 005949 577 ISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIK 654 (668)
Q Consensus 577 ~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~ 654 (668)
+++.+++++ ..|.|.+.++.. ++.|+++.+.+.+-.-. +|..... ..........++++|++++++ .+.+++
T Consensus 237 AHv~a~E~~~a~GRyic~~~~~-~~~ei~~~l~~~~P~~~----ip~~~~~-~~~~~~~~~~~~~~k~k~lg~~~~~~l~ 310 (327)
T KOG1502|consen 237 AHVLALEKPSAKGRYICVGEVV-SIKEIADILRELFPDYP----IPKKNAE-EHEGFLTSFKVSSEKLKSLGGFKFRPLE 310 (327)
T ss_pred HHHHHHcCcccCceEEEecCcc-cHHHHHHHHHHhCCCCC----CCCCCCc-cccccccccccccHHHHhcccceecChH
Confidence 999999988 789999998544 49999999999864321 2211100 001111223689999999997 889999
Q ss_pred HHHHHHHhccCCC
Q 005949 655 DSLIKYVFEPNKK 667 (668)
Q Consensus 655 ~~l~~~~~~~~~~ 667 (668)
|.+.+++.++.++
T Consensus 311 e~~~dt~~sl~~~ 323 (327)
T KOG1502|consen 311 ETLSDTVESLREK 323 (327)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=304.30 Aligned_cols=273 Identities=17% Similarity=0.158 Sum_probs=209.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHc--CCcc------------------------cccccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKE--GIPF------------------------EYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~--g~~v------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
+||||||||+||||++|++.|+++ +++| .++.+|++|.+.+...+...++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 379999999999999999999998 4433 23457888888887777656789999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
|+|+.. ..+.+..++.+++++|+.||.+|+++|++.+ + ++|++||+.||+.....+ ..+ ..|+.+..|.+.
T Consensus 86 HlAa~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~---~~~-~~E~~~~~p~~~ 158 (668)
T PLN02260 86 HFAAQT---HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA---DVG-NHEASQLLPTNP 158 (668)
T ss_pred ECCCcc---CchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc---ccC-ccccCCCCCCCC
Confidence 999987 4555556777889999999999999999987 5 788999999998654322 011 245555667789
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecC-----CCcccHhhHHHHHHHH
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTVLDELLPISIEM 581 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~ 581 (668)
|+.+|..+|++++.+.+.++++++++|++++|||.+ |+..+..++.....+ .+|+|++|+|+++..+
T Consensus 159 Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~ 238 (668)
T PLN02260 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV 238 (668)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence 999999999999998777899999999999999973 233344444433322 2799999999999999
Q ss_pred Hhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHH
Q 005949 582 AKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIK 659 (668)
Q Consensus 582 ~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~ 659 (668)
+++. .+++||+++++.+|+.|+++.+++.+|.+.... +... ...+.......+|++|++++++ +..+|+|+|++
T Consensus 239 l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-i~~~---~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~ 314 (668)
T PLN02260 239 LHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-IKFV---ENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKK 314 (668)
T ss_pred HhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-eeec---CCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHH
Confidence 9865 578999999999999999999999999764311 0000 0011112234589999987655 45799999999
Q ss_pred HHhccCC
Q 005949 660 YVFEPNK 666 (668)
Q Consensus 660 ~~~~~~~ 666 (668)
+++|+.+
T Consensus 315 ~i~w~~~ 321 (668)
T PLN02260 315 TMEWYTS 321 (668)
T ss_pred HHHHHHh
Confidence 9998854
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-32 Score=278.43 Aligned_cols=268 Identities=15% Similarity=0.139 Sum_probs=206.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc----------------------------ccccccCChhHHHHHhhhcCCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------------------YGKGRLEDCSSLIADVQSVKPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------------------~~~~D~~d~~~~~~~l~~~~~d~V 435 (668)
++|+||||+||||++|+++|+++|++|. ++.+|++|++.+.++++..++|+|
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v 85 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV 85 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999998652 235688899999888887788999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
||+|+.. .......++...+++|+.++.+++++|++.++ +++++||+.+|+.....| .+|+.+..|.+.
T Consensus 86 ih~a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~-------~~E~~~~~~~~~ 155 (352)
T PLN02240 86 IHFAGLK---AVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVP-------CTEEFPLSATNP 155 (352)
T ss_pred EEccccC---CccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCC-------CCCCCCCCCCCH
Confidence 9999976 23334456778899999999999999999887 678888888887543333 566677777899
Q ss_pred chhhHHHHHHHHHhccC-eeEeEEeeeecCCCCChh-----------------hHHHHhhccc--ceeec----------
Q 005949 515 YSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPR-----------------NFITKISRYN--KVVNI---------- 564 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~-----------------~~~~~~~~~~--~~~~~---------- 564 (668)
|+.+|.++|++++.+.. ..+++++++|++++||+. .++.++..+. .....
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 235 (352)
T PLN02240 156 YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGT 235 (352)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCC
Confidence 99999999999988753 357899999999999852 1233333332 11111
Q ss_pred -CCCcccHhhHHHHHHHHHhc----c--CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCc
Q 005949 565 -PNSMTVLDELLPISIEMAKR----N--LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNE 637 (668)
Q Consensus 565 -~~~~~~v~D~a~~~~~~~~~----~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (668)
..+|+|++|+|++++.++++ + .+++||+++++++|++|+++.+++.+|.+.++...+.. ..+.....
T Consensus 236 ~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~------~~~~~~~~ 309 (352)
T PLN02240 236 GVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRR------PGDAEEVY 309 (352)
T ss_pred EEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCC------CCChhhhh
Confidence 12789999999999888853 1 24799999999999999999999999977654433211 12222345
Q ss_pred cChhHHHhhcC--CccChHHHHHHHHhccCCC
Q 005949 638 MDASKLKKEFP--ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 638 ld~~k~~~~~g--~~~~~~~~l~~~~~~~~~~ 667 (668)
+|++|+++.+| +..+++++|+++++|+.++
T Consensus 310 ~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 341 (352)
T PLN02240 310 ASTEKAEKELGWKAKYGIDEMCRDQWNWASKN 341 (352)
T ss_pred cCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 79999999877 4468999999999998754
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=275.51 Aligned_cols=267 Identities=16% Similarity=0.171 Sum_probs=204.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
|||+||||+||||++|++.|+++|++|. ++.+|++|.+.+.++++..++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 6899999999999999999999998653 245788888888888887678999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC-CCCCcch
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN-FTGSFYS 516 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~-~~~~~Y~ 516 (668)
|+.. ........+...+++|+.++.+|+++|++.++ ++|++||+.+|+.....+ .+|+.+. .|.+.|+
T Consensus 81 a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~-------~~E~~~~~~p~~~Y~ 150 (338)
T PRK10675 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIP-------YVESFPTGTPQSPYG 150 (338)
T ss_pred Cccc---cccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCc-------cccccCCCCCCChhH
Confidence 9976 33223445667889999999999999999988 577778888997544333 4555554 5678999
Q ss_pred hhHHHHHHHHHhccCe-eEeEEeeeecCCCCChh--------------hHH---HHhhcccc-ee-e-----------cC
Q 005949 517 KTKAMVEELLKEYDNV-CTLRVRMPISSDLNNPR--------------NFI---TKISRYNK-VV-N-----------IP 565 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~-~~l~~~~~r~~~~~g~~--------------~~~---~~~~~~~~-~~-~-----------~~ 565 (668)
.+|..+|++++.+.+. .+++++++|++++|||. .++ .++..+.. .. . ..
T Consensus 151 ~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 230 (338)
T PRK10675 151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230 (338)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEE
Confidence 9999999999988543 47899999998888862 122 22333221 11 1 11
Q ss_pred CCcccHhhHHHHHHHHHhc--c--CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 566 NSMTVLDELLPISIEMAKR--N--LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 566 ~~~~~v~D~a~~~~~~~~~--~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
.+|+|++|+|++++.+++. . .+++||+++++.+|+.|+++.+.+.+|.+..+...+.. ........+|++
T Consensus 231 ~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~ 304 (338)
T PRK10675 231 RDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRR------EGDLPAYWADAS 304 (338)
T ss_pred EeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCC------CCchhhhhcCHH
Confidence 2899999999999999874 1 34699999999999999999999999987654332211 122234567999
Q ss_pred HHHhhcC--CccChHHHHHHHHhccCC
Q 005949 642 KLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 642 k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
|+++.+| +..+++++|+++++++.+
T Consensus 305 k~~~~lg~~p~~~~~~~~~~~~~~~~~ 331 (338)
T PRK10675 305 KADRELNWRVTRTLDEMAQDTWHWQSR 331 (338)
T ss_pred HHHHHhCCCCcCcHHHHHHHHHHHHHh
Confidence 9998877 467899999999999854
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=271.64 Aligned_cols=269 Identities=19% Similarity=0.196 Sum_probs=208.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcC--Cccc------------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEG--IPFE------------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g--~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
+|+|||||||||++++++|++.| ++|. ++.+|++|++++.+++++.++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 49999999999999999999987 4332 345789999999999998778999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHc--CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
|+.. ..+.+..++..++++|+.++.+++++|.+. +++++++||..+|+...... ...|+.+..|.+.|+
T Consensus 81 a~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~------~~~e~~~~~~~~~Y~ 151 (317)
T TIGR01181 81 AAES---HVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGD------AFTETTPLAPSSPYS 151 (317)
T ss_pred cccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCC------CcCCCCCCCCCCchH
Confidence 9976 344455677788999999999999999986 45899999999998654321 144555666778999
Q ss_pred hhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecC-----CCcccHhhHHHHHHHHHh
Q 005949 517 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTVLDELLPISIEMAK 583 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~ 583 (668)
.+|..+|++++.+.+..+++++++|++.+|||.. ++..+..++....++ .+|+|++|+|+++..+++
T Consensus 152 ~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~ 231 (317)
T TIGR01181 152 ASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE 231 (317)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc
Confidence 9999999999988777899999999999999852 333444444333222 289999999999999998
Q ss_pred cc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHH
Q 005949 584 RN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKY 660 (668)
Q Consensus 584 ~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~ 660 (668)
+. .+++||+++++.+|+.|+++.+.+.+|.+........ ..........+|++|+++.+| +..+|++++.++
T Consensus 232 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~ 306 (317)
T TIGR01181 232 KGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVE-----DRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKT 306 (317)
T ss_pred CCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccC-----CCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHH
Confidence 65 5579999999999999999999999986533211100 001111123589999998877 446899999999
Q ss_pred HhccCCC
Q 005949 661 VFEPNKK 667 (668)
Q Consensus 661 ~~~~~~~ 667 (668)
++++.+.
T Consensus 307 ~~~~~~~ 313 (317)
T TIGR01181 307 VQWYLDN 313 (317)
T ss_pred HHHHHhc
Confidence 9988654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=271.19 Aligned_cols=266 Identities=15% Similarity=0.190 Sum_probs=201.0
Q ss_pred EEEEcCCcchhHHHHHHHHHcCC-cccc-----------------cccccCChhHHHHHhhh--cCCCEEEEcccccCCC
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGI-PFEY-----------------GKGRLEDCSSLIADVQS--VKPTHVFNAAGVTGRP 445 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~-~v~~-----------------~~~D~~d~~~~~~~l~~--~~~d~Vih~a~~~~~~ 445 (668)
||||||+||||+++++.|.++|+ .|.. +..|+.+.+.++.+.+. .++|+|||+|+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~--- 77 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS--- 77 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcccc---
Confidence 69999999999999999999997 4422 12355565555544431 3689999999965
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
. ....++...+++|+.++.+|+++|+++++++|++||+.||+.... + +.||+.+..|.+.|+.+|..+|++
T Consensus 78 ~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~-~------~~e~~~~~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 78 D--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEA-G------FREGRELERPLNVYGYSKFLFDQY 148 (314)
T ss_pred C--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCC-C------cccccCcCCCCCHHHHHHHHHHHH
Confidence 2 234567778899999999999999999999999999999975432 2 466665556778999999999999
Q ss_pred HHhcc--CeeEeEEeeeecCCCCChhh------------HHHHhhcccceeec-----------CCCcccHhhHHHHHHH
Q 005949 526 LKEYD--NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNI-----------PNSMTVLDELLPISIE 580 (668)
Q Consensus 526 ~~~~~--~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~-----------~~~~~~v~D~a~~~~~ 580 (668)
++.|. ...+++++++|++++|||.. ++..+..++..... ..+|+|++|++++++.
T Consensus 149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~ 228 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW 228 (314)
T ss_pred HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence 98753 23457899999999999962 23334444433221 1379999999999999
Q ss_pred HHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHH
Q 005949 581 MAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLI 658 (668)
Q Consensus 581 ~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~ 658 (668)
++++...++||+++++++|++|+++.+++.+|.+..+...+.++.. .........+|++|+++.+| +.++++++|+
T Consensus 229 ~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~ 306 (314)
T TIGR02197 229 LLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEAL--RGKYQYFTQADITKLRAAGYYGPFTTLEEGVK 306 (314)
T ss_pred HHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCcccc--ccccccccccchHHHHHhcCCCCcccHHHHHH
Confidence 9988677899999999999999999999999976543333322110 01112235689999999987 5689999999
Q ss_pred HHHhccC
Q 005949 659 KYVFEPN 665 (668)
Q Consensus 659 ~~~~~~~ 665 (668)
++++++.
T Consensus 307 ~~~~~~~ 313 (314)
T TIGR02197 307 DYVQWLL 313 (314)
T ss_pred HHHHHHh
Confidence 9999874
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=271.12 Aligned_cols=270 Identities=13% Similarity=0.143 Sum_probs=199.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
|+||||||+||||+++++.|+++|++|. ++.+|++|.+++.++++++ |+|||
T Consensus 6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vih 83 (325)
T PLN02989 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGC--ETVFH 83 (325)
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCC--CEEEE
Confidence 6899999999999999999999998641 2356888988888888864 99999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC----
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT---- 511 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~---- 511 (668)
+||.. .......++...+++|+.|+.+++++|.+. ++ ++|++||..+|++....+ + .....+|+.+..|
T Consensus 84 ~A~~~---~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~-~-~~~~~~E~~~~~p~~~~ 158 (325)
T PLN02989 84 TASPV---AITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKL-G-PNDVVDETFFTNPSFAE 158 (325)
T ss_pred eCCCC---CCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccC-C-CCCccCcCCCCchhHhc
Confidence 99965 333334456778899999999999999885 44 678888888876542110 0 0112455555443
Q ss_pred --CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---------HHHHhhccccee-ecCCCcccHhhHHHHHH
Q 005949 512 --GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------FITKISRYNKVV-NIPNSMTVLDELLPISI 579 (668)
Q Consensus 512 --~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~-~~~~~~~~v~D~a~~~~ 579 (668)
.++|+.||.++|++++.|.+.++++++++|++++|||+. ++..++.++... ....+|+|++|+|++++
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~ 238 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHV 238 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHH
Confidence 368999999999999998777899999999999999962 333444443322 22248999999999999
Q ss_pred HHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHH
Q 005949 580 EMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSL 657 (668)
Q Consensus 580 ~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l 657 (668)
.+++++ .+|+||++ ++.+|++|+++.+++.++.. .+...+ . ...........+|++|++++++ +..++++||
T Consensus 239 ~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi 312 (325)
T PLN02989 239 KALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-CIADRN-E---DITELNSVTFNVCLDKVKSLGIIEFTPTETSL 312 (325)
T ss_pred HHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-CCCCCC-C---CcccccccCcCCCHHHHHHcCCCCCCCHHHHH
Confidence 999875 46899995 56899999999999998732 111100 0 0001111234679999998544 778999999
Q ss_pred HHHHhccCC
Q 005949 658 IKYVFEPNK 666 (668)
Q Consensus 658 ~~~~~~~~~ 666 (668)
+++++++..
T Consensus 313 ~~~~~~~~~ 321 (325)
T PLN02989 313 RDTVLSLKE 321 (325)
T ss_pred HHHHHHHHH
Confidence 999999854
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=258.30 Aligned_cols=282 Identities=13% Similarity=0.084 Sum_probs=200.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccc-cCC-CcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKN-LIP-SKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
.+++|||||||||||+++++.|+++ +++|+++.|......... +.. .....+++++.+|++|.+.+.+++ .++|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l--~~~d 80 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL--KGCS 80 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHH--cCCC
Confidence 4679999999999999999999999 678888777422111100 000 011246889999999999999998 6899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCC--CCCCcCCCCCCCCCCCC-----
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE--TDEDAVVGNHEASQLLP----- 155 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~--~~~~~~~~~~e~~~~~p----- 155 (668)
+|+|+++..... ..+..+.+++|+.|+.+++++|.+...+++||++||..+++. .........+|+.+..+
T Consensus 81 ~v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~ 158 (297)
T PLN02583 81 GLFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRK 158 (297)
T ss_pred EEEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhh
Confidence 999987654321 124567899999999999999988644789999999876532 11111122345443322
Q ss_pred -CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 156 -TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 156 -~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
..+|+.+|..+|++++.++++.+++++++||++||||+..+.. + ...+.. ....+ ..++||||+|+|+|
T Consensus 159 ~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a 228 (297)
T PLN02583 159 FKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--P-----YLKGAA-QMYEN--GVLVTVDVNFLVDA 228 (297)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--h-----hhcCCc-ccCcc--cCcceEEHHHHHHH
Confidence 2379999999999999998777999999999999999864321 1 122221 22222 34579999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcc
Q 005949 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304 (668)
Q Consensus 235 i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~ 304 (668)
++++++.+..++.|+++++......++++.+.+.++..+.... .. +.........++++|+++||++.
T Consensus 229 ~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~-~~~~~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 229 HIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPP-YE-MQGSEVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred HHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCc-cc-ccCCCccccccChHHHHHhCccc
Confidence 9999998877779999976655678899999998865432110 01 11112244678999999999874
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=270.33 Aligned_cols=266 Identities=15% Similarity=0.133 Sum_probs=195.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
|+||||||+||||++|+++|+++|++|. ++.+|++|++.+.++++++ |+|||
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGC--EGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCC--CEEEE
Confidence 6899999999999999999999998652 2346888888888888865 99999
Q ss_pred cccccCCCCccccccccc-cceehhhhhhHHHHHHHHHc-CC-cEEEEecce--eEeecCCCCCCCCCCCCCCCCCCCC-
Q 005949 438 AAGVTGRPNVDWCESHKT-DTIRTNVAGTLTLADVCRDH-GI-LMMNYATGC--IFEYDAAHPEGSGIGYKEEDTPNFT- 511 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~--vy~~~~~~p~~~~~~~~ee~~~~~~- 511 (668)
+|+.. . ....++. .++++|+.|+.+++++|++. ++ ++|++||.. +|++....+ .. ..+|+.+..|
T Consensus 83 ~A~~~---~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~---~~-~~~E~~~~~p~ 153 (322)
T PLN02662 83 TASPF---Y--HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTP---DV-VVDETWFSDPA 153 (322)
T ss_pred eCCcc---c--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCC---CC-cCCcccCCChh
Confidence 99965 1 1223444 67889999999999999987 77 566777765 354322111 11 2445544433
Q ss_pred -----CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---------HHHHhhcccce-eecCCCcccHhhHHH
Q 005949 512 -----GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------FITKISRYNKV-VNIPNSMTVLDELLP 576 (668)
Q Consensus 512 -----~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~-~~~~~~~~~v~D~a~ 576 (668)
.+.|+.+|.++|++++.|.+.++++++++|++++|||.. ++..++.+... .....+|+|++|+|+
T Consensus 154 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 233 (322)
T PLN02662 154 FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVAN 233 (322)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHH
Confidence 268999999999999998777899999999999999952 23334433221 223458999999999
Q ss_pred HHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcCCccChHH
Q 005949 577 ISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKD 655 (668)
Q Consensus 577 ~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g~~~~~~~ 655 (668)
+++.+++++ ..|.||++ ++.+|++|+++.+.+.++.. . ++... ...........+|++|+++++++..++++
T Consensus 234 a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~-~---~~~~~--~~~~~~~~~~~~d~~k~~~lg~~~~~~~~ 306 (322)
T PLN02662 234 AHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL-Q---LPEKC--ADDKPYVPTYQVSKEKAKSLGIEFIPLEV 306 (322)
T ss_pred HHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC-C---CCCCC--CCccccccccccChHHHHHhCCccccHHH
Confidence 999999875 56799997 58899999999999987642 1 11100 00011223457899999975446678999
Q ss_pred HHHHHHhccCCC
Q 005949 656 SLIKYVFEPNKK 667 (668)
Q Consensus 656 ~l~~~~~~~~~~ 667 (668)
+|+++++|++++
T Consensus 307 ~l~~~~~~~~~~ 318 (322)
T PLN02662 307 SLKDTVESLKEK 318 (322)
T ss_pred HHHHHHHHHHHc
Confidence 999999998654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-31 Score=268.54 Aligned_cols=267 Identities=16% Similarity=0.171 Sum_probs=193.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
+|+|+||||+||||++|+++|+++|++|. ++.+|++|++++.+.++++ |+|||
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGC--DLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcC--CEEEE
Confidence 46899999999999999999999998651 2356888888888888865 99999
Q ss_pred cccccCCCCccccccccc-cceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeecCCCCCCCCCCCCCCC--------
Q 005949 438 AAGVTGRPNVDWCESHKT-DTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYDAAHPEGSGIGYKEED-------- 506 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~-------- 506 (668)
+|+.. . ....++. .++++|+.|+.+|+++|++. ++ +++++||..+|+..... +.+.+..|+.
T Consensus 87 ~A~~~---~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~--~~~~~~~E~~~~~~~~~~ 159 (338)
T PLN00198 87 VATPV---N--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLS--GTGLVMNEKNWTDVEFLT 159 (338)
T ss_pred eCCCC---c--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCC--CCCceeccccCCchhhhh
Confidence 99954 1 1123343 46789999999999999886 45 77888888999854210 0001112211
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------H---HHHhhcccceeec----------CCC
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------F---ITKISRYNKVVNI----------PNS 567 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~---~~~~~~~~~~~~~----------~~~ 567 (668)
.+.+|.++|+.||.++|++++.|.+.++++++++|++++|||+. + +..++.+...... ..+
T Consensus 160 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (338)
T PLN00198 160 SEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSIS 239 (338)
T ss_pred hcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcc
Confidence 23356788999999999999999877899999999999999962 1 2233333322111 138
Q ss_pred cccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccChhHHHh
Q 005949 568 MTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDASKLKK 645 (668)
Q Consensus 568 ~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~ 645 (668)
|+|++|+|++++.++++. ..|.| +++++.+|+.|+++.+.+.++. +.+... . . ........+|++|+++
T Consensus 240 ~i~V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~~~~~~---~----~-~~~~~~~~~~~~k~~~ 310 (338)
T PLN00198 240 ITHVEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQVPTDF---G----D-FPSKAKLIISSEKLIS 310 (338)
T ss_pred eeEHHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCCCCccc---c----c-cCCCCccccChHHHHh
Confidence 999999999999999875 45788 5666889999999999988753 221110 0 0 0112234679999998
Q ss_pred hcC-CccChHHHHHHHHhccCCC
Q 005949 646 EFP-ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 646 ~~g-~~~~~~~~l~~~~~~~~~~ 667 (668)
+++ +..+++++|++++.|+++.
T Consensus 311 ~G~~p~~~l~~gi~~~~~~~~~~ 333 (338)
T PLN00198 311 EGFSFEYGIEEIYDQTVEYFKAK 333 (338)
T ss_pred CCceecCcHHHHHHHHHHHHHHc
Confidence 744 5579999999999988643
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=265.28 Aligned_cols=270 Identities=15% Similarity=0.157 Sum_probs=192.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
.|+||||||+||||++++++|+++|++|. ++.+|++|.+.+.+++++ +|+|||+|
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vih~A 87 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKG--CDGVFHVA 87 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcC--CCEEEECC
Confidence 37999999999999999999999998652 456788898888888875 59999999
Q ss_pred cccCCCCccc--ccccccccee-----hhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCCCCCCCCCCCCCCCCC--
Q 005949 440 GVTGRPNVDW--CESHKTDTIR-----TNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP-- 508 (668)
Q Consensus 440 ~~~~~~~~~~--~~~~~~~~~~-----~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~-- 508 (668)
+.. .... ...++..+++ .|+.|+.+|+++|++.+ + +++++||+++|+..... +......+|+.+
T Consensus 88 ~~~---~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~~~E~~~~p 162 (353)
T PLN02896 88 ASM---EFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSN--GRWRAVVDETCQTP 162 (353)
T ss_pred ccc---cCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccC--CCCCCccCcccCCc
Confidence 976 2221 2345554444 45699999999999875 5 67888998999854211 000012334321
Q ss_pred -------CCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh------hHHHHhh---ccccee-------ec-
Q 005949 509 -------NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------NFITKIS---RYNKVV-------NI- 564 (668)
Q Consensus 509 -------~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------~~~~~~~---~~~~~~-------~~- 564 (668)
.++.++||.||.++|++++.|.+.++++++++|++++|||+ .++..++ .+.... ..
T Consensus 163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 242 (353)
T PLN02896 163 IDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSR 242 (353)
T ss_pred HHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccc
Confidence 23446899999999999999987789999999999999996 2333333 222111 01
Q ss_pred --CCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCC-CCCCCCCHHHhhhhhccCCCCCccCh
Q 005949 565 --PNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPE-FKWVNFTLEEQAKVIVAPRSNNEMDA 640 (668)
Q Consensus 565 --~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ld~ 640 (668)
..+|+|++|+|++++.+++++ ..++||+ +++.+|++|+++.+++.++.. ..+...+ ....+. ...+|+
T Consensus 243 ~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~------~~~~~~-~~~~~~ 314 (353)
T PLN02896 243 MGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE------EKRGSI-PSEISS 314 (353)
T ss_pred cCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc------cccCcc-ccccCH
Confidence 128999999999999999865 4678864 678899999999999998732 1111110 011111 235799
Q ss_pred hHHHhhcC-CccChHHHHHHHHhccCCC
Q 005949 641 SKLKKEFP-ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 641 ~k~~~~~g-~~~~~~~~l~~~~~~~~~~ 667 (668)
+|++++++ +..+++++|+++++++..+
T Consensus 315 ~~~~~lGw~p~~~l~~~i~~~~~~~~~~ 342 (353)
T PLN02896 315 KKLRDLGFEYKYGIEEIIDQTIDCCVDH 342 (353)
T ss_pred HHHHHcCCCccCCHHHHHHHHHHHHHHC
Confidence 99987544 4568999999999998654
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=228.46 Aligned_cols=268 Identities=20% Similarity=0.229 Sum_probs=219.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCc---c---cccccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIP---F---EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTD 456 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~---v---~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 456 (668)
|||||+|||+|.+|++|.+.+.++|.+ + ..-..|+++.++.+.+++..+|.+|||+|+..| +...+...+.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ekPthVIhlAAmVG--Glf~N~~ynld 78 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESEKPTHVIHLAAMVG--GLFHNNTYNLD 78 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhccCCceeeehHhhhc--chhhcCCCchH
Confidence 579999999999999999999999872 2 234689999999999999999999999999886 66677888999
Q ss_pred ceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC-----CCCCCCCcchhhHHHHHHHHHhcc
Q 005949 457 TIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED-----TPNFTGSFYSKTKAMVEELLKEYD 530 (668)
Q Consensus 457 ~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~-----~~~~~~~~Y~~sK~~~E~~~~~~~ 530 (668)
+++.|+..-.|++..|-.+|+ |.+++.|+|+|......| ++|. .|.+..-.|+..|+++.-..+.|.
T Consensus 79 F~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yP-------IdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~ 151 (315)
T KOG1431|consen 79 FIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYP-------IDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYR 151 (315)
T ss_pred HHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCC-------CCHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 788889999998887777 4444 233333459999999998889998
Q ss_pred CeeEeEEeeeecCCCCChh------------hHHHHhh----cccceeecCC------CcccHhhHHHHHHHHHhcc-CC
Q 005949 531 NVCTLRVRMPISSDLNNPR------------NFITKIS----RYNKVVNIPN------SMTVLDELLPISIEMAKRN-LR 587 (668)
Q Consensus 531 ~~~~l~~~~~r~~~~~g~~------------~~~~~~~----~~~~~~~~~~------~~~~v~D~a~~~~~~~~~~-~~ 587 (668)
..+|-.++.+.|.|+|||. .++.++. .+.....+++ .|+|.+|+|+++++++.+= .-
T Consensus 152 ~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~v 231 (315)
T KOG1431|consen 152 QQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEGV 231 (315)
T ss_pred HHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcCc
Confidence 8899999999999999996 1333322 2222333333 8999999999999999763 44
Q ss_pred ceeeecCCC--ccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 588 GIWNFTNPG--VVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 588 g~~ni~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
+.++++.++ .+|++|+++++.+.++....++....+ +..+....+|++||+.+++ ++.+++++|.++++|
T Consensus 232 Epiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK------~DGq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~W 305 (315)
T KOG1431|consen 232 EPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK------SDGQFKKTASNSKLRSLLPDFKFTPLEQAISETVQW 305 (315)
T ss_pred cceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC------CCCCcccccchHHHHHhCCCcccChHHHHHHHHHHH
Confidence 578888887 999999999999999988766544332 4455667899999999999 567899999999999
Q ss_pred cC
Q 005949 664 PN 665 (668)
Q Consensus 664 ~~ 665 (668)
+.
T Consensus 306 y~ 307 (315)
T KOG1431|consen 306 YL 307 (315)
T ss_pred HH
Confidence 75
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=268.06 Aligned_cols=264 Identities=24% Similarity=0.264 Sum_probs=198.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccCCcc-ccC----C----------------CcCCCCeEE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSNLK-NLI----P----------------SKASSNFKF 61 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~-~~~----~----------------~~~~~~~~~ 61 (668)
+++++|||||||||||++|++.|++.++.+ +|+++.|........ .+. . .....++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 568999999999999999999999875554 688888765422111 100 0 001257899
Q ss_pred EEccCC-------CHHHHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc
Q 005949 62 VKGDIA-------SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134 (668)
Q Consensus 62 ~~~Dl~-------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~ 134 (668)
+.+|++ +.+.+.+++ .++|+|||+||.... ..++...+++|+.||.+++++|++.+.+++|||+||+.
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~--~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMW--KEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred EecccCCcCCCCChHHHHHHHH--hCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 999998 445566666 579999999998764 24677899999999999999999875589999999999
Q ss_pred ccCCCCCCcC---CCCCCC------------------------------------------C---CCCCCChhHHHHHHH
Q 005949 135 VYGETDEDAV---VGNHEA------------------------------------------S---QLLPTNPYSATKAGA 166 (668)
Q Consensus 135 vyg~~~~~~~---~~~~e~------------------------------------------~---~~~p~~~Y~~sK~~~ 166 (668)
|||...+... .+..++ . ...+.++|+.+|.++
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 9987542100 000000 0 122457899999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-C------hHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHH
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-K------LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~ 239 (668)
|.+++.++. +++++++||++||||...+. . ....++..+.+|....++++|.+.++++||+|++++++.++
T Consensus 244 E~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 244 EMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 999988753 89999999999999987542 1 22334444556666667899999999999999999999888
Q ss_pred hcC----CCCceEEEcCC--CcccHHHHHHHHHHHhCCCCC
Q 005949 240 HKG----EVGHVYNVGTK--KERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 240 ~~~----~~~~~~ni~~~--~~~s~~el~~~i~~~~g~~~~ 274 (668)
... ..+++||++++ .++|+.|+++.+.+.++..|.
T Consensus 322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 652 23578999998 889999999999998876554
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=262.49 Aligned_cols=267 Identities=15% Similarity=0.169 Sum_probs=192.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
++|+||||+||||++++++|+++|++|. ++.+|++|++.+.++++++ |+|||
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGC--DAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCC--CEEEE
Confidence 5899999999999999999999998652 2346788888888888865 99999
Q ss_pred cccccCCCCcccccccc-ccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEe-ecCCCCCCCCCCCCCCCCCC----
Q 005949 438 AAGVTGRPNVDWCESHK-TDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFE-YDAAHPEGSGIGYKEEDTPN---- 509 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~-~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~-~~~~~p~~~~~~~~ee~~~~---- 509 (668)
+|+.. .. ...++ ...+++|+.|+.+++++|++. ++ ++|++||+.+|+ +.... ..+. ..+|+.+.
T Consensus 84 ~A~~~---~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~--~~~~-~~~E~~~~~p~~ 155 (322)
T PLN02986 84 TASPV---FF--TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPI--EAND-VVDETFFSDPSL 155 (322)
T ss_pred eCCCc---CC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccC--CCCC-CcCcccCCChHH
Confidence 99965 11 12233 356889999999999999986 66 677778876653 21110 0011 23344332
Q ss_pred --CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---------HHHHhhccccee-ecCCCcccHhhHHHH
Q 005949 510 --FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------FITKISRYNKVV-NIPNSMTVLDELLPI 577 (668)
Q Consensus 510 --~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~-~~~~~~~~v~D~a~~ 577 (668)
.+.+.|+.||.++|++++.|.+.++++++++||+++|||.. ++..++.+.... ....+|+|++|+|++
T Consensus 156 ~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a 235 (322)
T PLN02986 156 CRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALA 235 (322)
T ss_pred hhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHH
Confidence 23578999999999999999777899999999999999951 233444443321 122479999999999
Q ss_pred HHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcCCccChHHH
Q 005949 578 SIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDS 656 (668)
Q Consensus 578 ~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g~~~~~~~~ 656 (668)
++.+++++ .+|.||++ ++.+|+.|+++.+++.++. ..+... ... . ........+|++|++.+++++++++|+
T Consensus 236 ~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~---~~~-~-~~~~~~~~~d~~~~~~lg~~~~~l~e~ 308 (322)
T PLN02986 236 HIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-LCIADT---NEE-S-EMNEMICKVCVEKVKNLGVEFTPMKSS 308 (322)
T ss_pred HHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCC---Ccc-c-cccccCCccCHHHHHHcCCcccCHHHH
Confidence 99999875 56799995 5789999999999999863 221111 000 0 001112258999998754466799999
Q ss_pred HHHHHhccCCC
Q 005949 657 LIKYVFEPNKK 667 (668)
Q Consensus 657 l~~~~~~~~~~ 667 (668)
|+++++++..+
T Consensus 309 ~~~~~~~~~~~ 319 (322)
T PLN02986 309 LRDTILSLKEK 319 (322)
T ss_pred HHHHHHHHHHc
Confidence 99999998654
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=264.26 Aligned_cols=264 Identities=17% Similarity=0.182 Sum_probs=191.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
++||||||+||||++|+++|+++|++|. ++.+|++|.+.+.++++++ |+|||
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~--d~ViH 83 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGC--TGVFH 83 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCC--CEEEE
Confidence 5899999999999999999999998652 2457888888888888865 99999
Q ss_pred cccccCCCCcccccccc-ccceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCC-CCCCCCCCCCCCC-------
Q 005949 438 AAGVTGRPNVDWCESHK-TDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAA-HPEGSGIGYKEED------- 506 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~-~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~-~p~~~~~~~~ee~------- 506 (668)
+|+.. . ....++ ...+++|+.|+.+|+++|++.+ + ++|++||..+|++... .| .+.|++
T Consensus 84 ~A~~~---~--~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~-----~~~E~~~~~~~~~ 153 (351)
T PLN02650 84 VATPM---D--FESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP-----VYDEDCWSDLDFC 153 (351)
T ss_pred eCCCC---C--CCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCC-----ccCcccCCchhhh
Confidence 99865 2 122234 4688999999999999999987 5 6778888777765322 11 012221
Q ss_pred -CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-------HHHHh--hcccce-e--ecCCCcccHhh
Q 005949 507 -TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------FITKI--SRYNKV-V--NIPNSMTVLDE 573 (668)
Q Consensus 507 -~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~~--~~~~~~-~--~~~~~~~~v~D 573 (668)
.+..+.++|+.||.++|++++.|.+.++++++++|++++|||.. ++..+ ..+... . ....+|+|++|
T Consensus 154 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~D 233 (351)
T PLN02650 154 RRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDD 233 (351)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHH
Confidence 12234468999999999999999877899999999999999962 33222 112211 1 11248999999
Q ss_pred HHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Ccc
Q 005949 574 LLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELL 651 (668)
Q Consensus 574 ~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~ 651 (668)
+|++++.+++++ .+|.| +++++.+|+.|+++.+++.++.. .+. .... ..........+|++|++.+++ +..
T Consensus 234 va~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~-~~~-~~~~----~~~~~~~~~~~d~~k~~~lG~~p~~ 306 (351)
T PLN02650 234 LCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEY-NIP-ARFP----GIDEDLKSVEFSSKKLTDLGFTFKY 306 (351)
T ss_pred HHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCccc-CCC-CCCC----CcCcccccccCChHHHHHhCCCCCC
Confidence 999999999875 46789 56678899999999999987631 111 0000 011122334679999876655 446
Q ss_pred ChHHHHHHHHhccCC
Q 005949 652 SIKDSLIKYVFEPNK 666 (668)
Q Consensus 652 ~~~~~l~~~~~~~~~ 666 (668)
+++++|+++++++.+
T Consensus 307 ~l~egl~~~i~~~~~ 321 (351)
T PLN02650 307 SLEDMFDGAIETCRE 321 (351)
T ss_pred CHHHHHHHHHHHHHH
Confidence 899999999998754
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-29 Score=271.62 Aligned_cols=256 Identities=19% Similarity=0.188 Sum_probs=193.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|+++ +++|++++|.... . ...+++++.+|+.|.+.+..++ .++|+|||
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~----~-----~~~~v~~v~gDL~D~~~l~~al--~~vD~VVH 67 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPD----S-----WPSSADFIAADIRDATAVESAM--TGADVVAH 67 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchh----h-----cccCceEEEeeCCCHHHHHHHH--hCCCEEEE
Confidence 48999999999999999999998 6789888885311 0 1135789999999999999988 57999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+.... .+++|+.++.++++++++.+ +++||++||.. |..+
T Consensus 68 lAa~~~~---------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~----------------------------K~aa 109 (854)
T PRK05865 68 CAWVRGR---------NDHINIDGTANVLKAMAETG-TGRIVFTSSGH----------------------------QPRV 109 (854)
T ss_pred CCCcccc---------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------HHHH
Confidence 9986421 46889999999999999977 88999999842 7888
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC-CCC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG-EVG 245 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~-~~~ 245 (668)
|+++.. ++++++++||++||||+. ..++..... .++...+++.+.++|+|++|+++++..+++.+ ..+
T Consensus 110 E~ll~~----~gl~~vILRp~~VYGP~~------~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~g 178 (854)
T PRK05865 110 EQMLAD----CGLEWVAVRCALIFGRNV------DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDS 178 (854)
T ss_pred HHHHHH----cCCCEEEEEeceEeCCCh------HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCC
Confidence 887743 489999999999999963 122332222 22222344556779999999999999988654 356
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCC-CCCcceEeccCC--CCCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHhh
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSM-DPETSIKFVENR--PFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~--~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
++||+++++.+|+.|+++.+.+.... ............ ........+|++|++ .|||+|+++++++|+++++||+.
T Consensus 179 gvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ 258 (854)
T PRK05865 179 GPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRG 258 (854)
T ss_pred CeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 79999999999999999998875421 100000000000 111123468999997 59999999999999999999998
Q ss_pred CCC
Q 005949 322 NPD 324 (668)
Q Consensus 322 ~~~ 324 (668)
+..
T Consensus 259 ri~ 261 (854)
T PRK05865 259 RIG 261 (854)
T ss_pred hcc
Confidence 653
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=251.56 Aligned_cols=281 Identities=21% Similarity=0.215 Sum_probs=196.1
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFA 88 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 88 (668)
|||||||||||+++++.|+++ +++|++++|...... ... ... ..|+.. ..+.+.+ .++|+|||+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~~~----~~~----~~~~~~-~~~~~~~--~~~D~Vvh~a 65 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGA--NTK----WEG----YKPWAP-LAESEAL--EGADAVINLA 65 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCC--ccc----cee----eecccc-cchhhhc--CCCCEEEECC
Confidence 699999999999999999998 688999988643211 110 001 112222 2334444 6799999999
Q ss_pred ccCCccccc--CChHHHHHHHHHHHHHHHHHHHHcCC-CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 89 AQTHVDNSF--GNSFEFTKNNIYGTHVLLEACKVTGQ-IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 89 ~~~~~~~~~--~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|.......+ ..+..+++.|+.++.++++++++.+. ..+||++||..+||.....+ .+|+.+..+.+.|+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~---~~E~~~~~~~~~~~~~~~~ 142 (292)
T TIGR01777 66 GEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRV---FTEEDSPAGDDFLAELCRD 142 (292)
T ss_pred CCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCC---cCcccCCCCCChHHHHHHH
Confidence 975432212 24457889999999999999999872 23677777788898754332 3555545555667777777
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCC
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 245 (668)
.|..+... ++.+++++++||+.+|||+. ...+.+........... .+++.++++|+|++|+++++..+++.+...
T Consensus 143 ~e~~~~~~-~~~~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~ 217 (292)
T TIGR01777 143 WEEAAQAA-EDLGTRVVLLRTGIVLGPKG---GALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASIS 217 (292)
T ss_pred HHHHhhhc-hhcCCceEEEeeeeEECCCc---chhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCcccC
Confidence 77776643 34589999999999999975 34444443332221112 467889999999999999999999886667
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEecc------CCCC-CCcccccChHHHHhCCCcccC-CHHHHH
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVE------NRPF-NDQRYFLDDQKLTSLGWSERT-IWEEGL 312 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~------~~~~-~~~~~~~~~~k~~~lG~~~~~-~~~~~l 312 (668)
++||+++++++|+.|+++.+++.+|.+....+..+. ..+. ......++++|++++||+|++ +++|++
T Consensus 218 g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 218 GPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred CceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 899999999999999999999999875332111110 0111 113456788999999999997 587753
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-28 Score=243.33 Aligned_cols=274 Identities=16% Similarity=0.110 Sum_probs=195.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
+.|+||||||+||||++|++.|+++ +++|+... +|+.|.+.+...+...++|+|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~------------------------~~~~~~~~v~~~l~~~~~D~V 61 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGS------------------------GRLENRASLEADIDAVKPTHV 61 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCEEEEec------------------------CccCCHHHHHHHHHhcCCCEE
Confidence 3579999999999999999999999 55665321 335566667777765689999
Q ss_pred EEcCccCCcc---cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCc---CCCCCCCCC-CCCCC
Q 005949 85 MHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA---VVGNHEASQ-LLPTN 157 (668)
Q Consensus 85 ih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~---~~~~~e~~~-~~p~~ 157 (668)
||+||..... .++.++.+.+++|+.++.+|+++|++.+ ++ ++++||.++|+.....+ ..+.+|+++ ..|.+
T Consensus 62 iH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s 139 (298)
T PLN02778 62 FNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGS 139 (298)
T ss_pred EECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCC
Confidence 9999987532 2456788999999999999999999987 65 66778888887533111 112344443 34558
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
+|+.+|.++|.+++.+++ ..++|+..++|++.. ....+++.+..++.+...+ .+|+|++|+++|++.
T Consensus 140 ~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~---~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~ 206 (298)
T PLN02778 140 FYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS---NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIE 206 (298)
T ss_pred chHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc---cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHH
Confidence 999999999999988753 468899888887532 2234667777776654432 379999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCC-cceEeccC-C--CCCCcccccChHHHHh-CCCcccCCHHHHH
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE-TSIKFVEN-R--PFNDQRYFLDDQKLTS-LGWSERTIWEEGL 312 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~-~--~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l 312 (668)
+++.+. +++||++++..+|+.|+++.+++.+|.... ..+...+. . .....+..+|++|+++ ++-.+. ..++++
T Consensus 207 ~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~ 284 (298)
T PLN02778 207 MAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKESLI 284 (298)
T ss_pred HHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHHHH
Confidence 987654 469999999999999999999999986421 01111111 0 0111223699999976 554343 467777
Q ss_pred HHHHHHHhh
Q 005949 313 RKTIEWYTQ 321 (668)
Q Consensus 313 ~~~~~~~~~ 321 (668)
+..++-++.
T Consensus 285 ~~~~~~~~~ 293 (298)
T PLN02778 285 KYVFEPNKK 293 (298)
T ss_pred HHHHHHHHh
Confidence 777765543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=258.48 Aligned_cols=268 Identities=19% Similarity=0.236 Sum_probs=200.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|+||||||+||||++|++.|+++||+|. ++.+|++|.+...+.++.+. |+|||+|+.. .
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-d~vih~aa~~---~ 76 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVP-DAVIHLAAQS---S 76 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCC-CEEEEccccC---c
Confidence 4599999999999999999999998752 34567778766676666654 9999999988 3
Q ss_pred cccccc-ccccceehhhhhhHHHHHHHHHcCCcEEEEecc-eeEeecCCCCCCCCCCCCCCC-CCCCCCCcchhhHHHHH
Q 005949 447 VDWCES-HKTDTIRTNVAGTLTLADVCRDHGILMMNYATG-CIFEYDAAHPEGSGIGYKEED-TPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 447 ~~~~~~-~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~-~~~~~~~~Y~~sK~~~E 523 (668)
...... ++..++++|+.++.+++++|++.+++.++++|+ .+|+..... . ...|+ .+..|.++|+.||.++|
T Consensus 77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~-----~-~~~E~~~~~~p~~~Yg~sK~~~E 150 (314)
T COG0451 77 VPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPP-----L-PIDEDLGPPRPLNPYGVSKLAAE 150 (314)
T ss_pred hhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCC-----C-CcccccCCCCCCCHHHHHHHHHH
Confidence 332222 456789999999999999999988855555555 666654111 1 24444 56666678999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChhh-------HHHH----hhcccceeecC------CCcccHhhHHHHHHHHHhccC
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPRN-------FITK----ISRYNKVVNIP------NSMTVLDELLPISIEMAKRNL 586 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~----~~~~~~~~~~~------~~~~~v~D~a~~~~~~~~~~~ 586 (668)
++++.+.+.++++++++|++++|||.. +... +.++.+..... .+++|++|++++++.++++..
T Consensus 151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 230 (314)
T COG0451 151 QLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD 230 (314)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCC
Confidence 999998777889999999999999972 2322 33343322222 268999999999999999875
Q ss_pred CceeeecCCC-ccCHHHHHHHHHhhcCCCCCC-CCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHh
Q 005949 587 RGIWNFTNPG-VVSHNEILEMYKKYINPEFKW-VNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVF 662 (668)
Q Consensus 587 ~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~ 662 (668)
.++||+++++ .+|++|+++.+++.+|..... ...+. ...........+|++|.++.+| +..++++++.+++.
T Consensus 231 ~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~ 306 (314)
T COG0451 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL----GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLE 306 (314)
T ss_pred CcEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC----CCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4499999997 999999999999999987552 21111 0112223456889999998888 33679999999988
Q ss_pred ccC
Q 005949 663 EPN 665 (668)
Q Consensus 663 ~~~ 665 (668)
++.
T Consensus 307 ~~~ 309 (314)
T COG0451 307 WLL 309 (314)
T ss_pred HHH
Confidence 764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=247.81 Aligned_cols=221 Identities=18% Similarity=0.230 Sum_probs=170.5
Q ss_pred EEEcCCcchhHHHHHHHHHcC--Ccc---------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 387 LIYGRTGWIGGLLGKLCEKEG--IPF---------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 387 li~G~~G~iG~~l~~~l~~~g--~~v---------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
|||||+||||++|+++|+++| ++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~--d~V~H~Aa~~- 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGV--DVVFHTAAPV- 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCC--ceEEEeCccc-
Confidence 699999999999999999999 432 26789999999999999998 9999999976
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCC-CCCCCCCCCCCCCCCC--CCCCcchhhH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAA-HPEGSGIGYKEEDTPN--FTGSFYSKTK 519 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~-~p~~~~~~~~ee~~~~--~~~~~Y~~sK 519 (668)
.. +.....+.++++|+.||.||+++|++.+++ +||.||..|++.... .+. ...+|+.+. .+.+.|+.||
T Consensus 78 --~~-~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~----~~~dE~~~~~~~~~~~Y~~SK 150 (280)
T PF01073_consen 78 --PP-WGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPI----INGDEDTPYPSSPLDPYAESK 150 (280)
T ss_pred --cc-cCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCc----ccCCcCCcccccccCchHHHH
Confidence 22 223456778999999999999999999995 666677788876222 220 012333332 3567899999
Q ss_pred HHHHHHHHhccC---e--eEeEEeeeecCCCCChhh------HHHHhhcccceeecC-----CCcccHhhHHHHHHHHHh
Q 005949 520 AMVEELLKEYDN---V--CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIP-----NSMTVLDELLPISIEMAK 583 (668)
Q Consensus 520 ~~~E~~~~~~~~---~--~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~ 583 (668)
.++|++++++.. . ..++++++||..+|||+. +...+..+......+ .+++|++|+|.+++.+++
T Consensus 151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~ 230 (280)
T PF01073_consen 151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ 230 (280)
T ss_pred HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence 999999999754 2 259999999999999972 222232332222222 279999999999998875
Q ss_pred c---c------CCceeeecCCCccC-HHHHHHHHHhhcCCCCCC
Q 005949 584 R---N------LRGIWNFTNPGVVS-HNEILEMYKKYINPEFKW 617 (668)
Q Consensus 584 ~---~------~~g~~ni~~~~~~s-~~e~~~~i~~~~g~~~~~ 617 (668)
. + .++.|+|++++++. +.||...+.+.+|.+.+.
T Consensus 231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 2 1 46799999999999 999999999999988653
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=255.08 Aligned_cols=269 Identities=18% Similarity=0.185 Sum_probs=203.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|+|+||||+||||+++++.|+++|++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--d~vi~~a~~~--- 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGC--RALFHVAADY--- 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCC--CEEEEeceec---
Confidence 589999999999999999999999854 34567899999999888866 9999999854
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCC-CCCCCCCCCCCCCCCCCC---CCcchhhHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAA-HPEGSGIGYKEEDTPNFT---GSFYSKTKA 520 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~-~p~~~~~~~~ee~~~~~~---~~~Y~~sK~ 520 (668)
.....++...++.|+.++.+|+++|++.++ +++++||+.+|+.... .| .+|+.+..+ .+.|+.+|.
T Consensus 76 --~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~-------~~e~~~~~~~~~~~~Y~~sK~ 146 (328)
T TIGR03466 76 --RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTP-------ADETTPSSLDDMIGHYKRSKF 146 (328)
T ss_pred --ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCC-------cCccCCCCcccccChHHHHHH
Confidence 122345677889999999999999999987 6788888899975322 22 344444433 468999999
Q ss_pred HHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccc--eeecCCCcccHhhHHHHHHHHHhccC-Cce
Q 005949 521 MVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNK--VVNIPNSMTVLDELLPISIEMAKRNL-RGI 589 (668)
Q Consensus 521 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~--~~~~~~~~~~v~D~a~~~~~~~~~~~-~g~ 589 (668)
++|++++.+....+++++++|++++|||.. ++...+.+.. ....+.+++|++|+|++++.++++.. +..
T Consensus 147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~ 226 (328)
T TIGR03466 147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGER 226 (328)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCce
Confidence 999999998776789999999999999862 2222222221 11233489999999999999998764 446
Q ss_pred eeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhh---------hhccCC------------CCCccChhHHHhhcC
Q 005949 590 WNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAK---------VIVAPR------------SNNEMDASKLKKEFP 648 (668)
Q Consensus 590 ~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---------~~~~~~------------~~~~ld~~k~~~~~g 648 (668)
||++ ++.+|+.|+++.+.+.+|.+.....++...... ...... ....+|++|+++.+|
T Consensus 227 ~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg 305 (328)
T TIGR03466 227 YILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELG 305 (328)
T ss_pred EEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcC
Confidence 7775 689999999999999999876655555321100 000111 134679999999888
Q ss_pred -CccChHHHHHHHHhccCCC
Q 005949 649 -ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 649 -~~~~~~~~l~~~~~~~~~~ 667 (668)
.+.+++++|.+++.+++++
T Consensus 306 ~~p~~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 306 YRQRPAREALRDAVEWFRAN 325 (328)
T ss_pred CCCcCHHHHHHHHHHHHHHh
Confidence 5579999999999988643
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=228.08 Aligned_cols=272 Identities=19% Similarity=0.215 Sum_probs=223.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc----------------------------cccccccCChhHHHHHhhhcCCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------------EYGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------------~~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
+++.||||-||+-|++|++.|+++||.| .++.+|++|...+.++++.++||-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 4568999999999999999999999843 467799999999999999999999
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC---CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG---ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~---~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
|+|+||++ .|..++.+|..+.+++..||.+||++.+..+ +++...|||..||.....| ..|.+|..|
T Consensus 82 IYNLaAQS---~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~p-------q~E~TPFyP 151 (345)
T COG1089 82 IYNLAAQS---HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIP-------QKETTPFYP 151 (345)
T ss_pred heeccccc---cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCc-------cccCCCCCC
Confidence 99999999 7999999999999999999999999999875 4778889999999888777 788899999
Q ss_pred CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---hHHHH--------hhcccc-eeec-----CCCcccHhhH
Q 005949 512 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NFITK--------ISRYNK-VVNI-----PNSMTVLDEL 574 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~~~~--------~~~~~~-~~~~-----~~~~~~v~D~ 574 (668)
.|+|+.+|+-+-++..+|.+.|++-.+.-+.+|--+|. .|+.+ +..|.. .... -.||-|..|-
T Consensus 152 rSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DY 231 (345)
T COG1089 152 RSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDY 231 (345)
T ss_pred CCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHH
Confidence 99999999999999999999999999999999999886 34433 222221 2222 2389999999
Q ss_pred HHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhh---------------hhccCCCCCccC
Q 005949 575 LPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAK---------------VIVAPRSNNEMD 639 (668)
Q Consensus 575 a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---------------~~~~~~~~~~ld 639 (668)
+++++.+++++.+..|.+++++..|++||++...+..|.+++++.--..|... .++.+..--.-|
T Consensus 232 Ve~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgd 311 (345)
T COG1089 232 VEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGD 311 (345)
T ss_pred HHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCC
Confidence 99999999999999999999999999999999999999887765221111100 001111112349
Q ss_pred hhHHHhhcC--CccChHHHHHHHHhcc
Q 005949 640 ASKLKKEFP--ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 640 ~~k~~~~~g--~~~~~~~~l~~~~~~~ 664 (668)
.+|+++.+| +..++++=++++++.-
T Consensus 312 p~KA~~~LGW~~~~~~~elv~~Mv~~d 338 (345)
T COG1089 312 PTKAKEKLGWRPEVSLEELVREMVEAD 338 (345)
T ss_pred HHHHHHHcCCccccCHHHHHHHHHHHH
Confidence 999997777 5678888888877653
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=253.79 Aligned_cols=267 Identities=18% Similarity=0.191 Sum_probs=204.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhcCCCEEEEcccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
||+||||+||||+++++.|+++|++|. .+.+|+++++++.++++..++|+|||+||.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 599999999999999999999998652 345788899999999887788999999997
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
. .......++...++.|+.++.+++++|.+.++ +++++||..+|+.....+ .+|+.+..|.+.|+.+|.
T Consensus 81 ~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~-------~~e~~~~~~~~~y~~sK~ 150 (328)
T TIGR01179 81 I---AVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIP-------ISEDSPLGPINPYGRSKL 150 (328)
T ss_pred c---CcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCC-------ccccCCCCCCCchHHHHH
Confidence 6 23334456777889999999999999999887 677778878886543333 455556667789999999
Q ss_pred HHHHHHHhccCe-eEeEEeeeecCCCCChh-------------hHHHHh---hc-c-cceee-----------cCCCccc
Q 005949 521 MVEELLKEYDNV-CTLRVRMPISSDLNNPR-------------NFITKI---SR-Y-NKVVN-----------IPNSMTV 570 (668)
Q Consensus 521 ~~E~~~~~~~~~-~~l~~~~~r~~~~~g~~-------------~~~~~~---~~-~-~~~~~-----------~~~~~~~ 570 (668)
.+|++++.+.+. .+++++++|++++|||. .++..+ .. . ..... ...+|+|
T Consensus 151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 230 (328)
T TIGR01179 151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH 230 (328)
T ss_pred HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence 999999988655 68999999999999973 122221 11 1 11111 1137899
Q ss_pred HhhHHHHHHHHHhc----cCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhh
Q 005949 571 LDELLPISIEMAKR----NLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKE 646 (668)
Q Consensus 571 v~D~a~~~~~~~~~----~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~ 646 (668)
++|+++++..++.. ..+++||+++++++|++|+++.+++.+|.+..+...+.. ........+|++|+++.
T Consensus 231 ~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 304 (328)
T TIGR01179 231 VMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR------PGDPASLVADASKIRRE 304 (328)
T ss_pred HHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC------CccccchhcchHHHHHH
Confidence 99999999999864 246899999999999999999999999987654322211 11122335799999988
Q ss_pred cC--Ccc-ChHHHHHHHHhccCCC
Q 005949 647 FP--ELL-SIKDSLIKYVFEPNKK 667 (668)
Q Consensus 647 ~g--~~~-~~~~~l~~~~~~~~~~ 667 (668)
+| +.. +++++|+++++++.++
T Consensus 305 lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 305 LGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred hCCCCCcchHHHHHHHHHHHHhcC
Confidence 77 333 4999999999988653
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-28 Score=243.55 Aligned_cols=272 Identities=17% Similarity=0.193 Sum_probs=199.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||++++++|+++ +++|++++|..... ..+ ...+++++.+|+.|++.+.+++ .++|+|||
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~--~~l----~~~~v~~v~~Dl~d~~~l~~al--~g~d~Vi~ 70 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKA--SFL----KEWGAELVYGDLSLPETLPPSF--KGVTAIID 70 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHh--hhH----hhcCCEEEECCCCCHHHHHHHH--CCCCEEEE
Confidence 48999999999999999999999 67888888853211 111 1236899999999999999999 68999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+++.. ..++....+.|+.++.+++++|++++ +++||++||..+.. .+..+|..+|..+
T Consensus 71 ~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~----------------~~~~~~~~~K~~~ 128 (317)
T CHL00194 71 ASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQ----------------YPYIPLMKLKSDI 128 (317)
T ss_pred CCCCC-----CCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccc----------------cCCChHHHHHHHH
Confidence 98642 23445677899999999999999987 99999999854311 1124589999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-CC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-VG 245 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~ 245 (668)
|++++. .+++++++||+.+|+. ++..+......+.+..+ .++.+.++|+|++|+|+++..+++.+. .+
T Consensus 129 e~~l~~----~~l~~tilRp~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~ 197 (317)
T CHL00194 129 EQKLKK----SGIPYTIFRLAGFFQG------LISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKN 197 (317)
T ss_pred HHHHHH----cCCCeEEEeecHHhhh------hhhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccC
Confidence 998753 4899999999988863 12222222233444444 455677899999999999999997653 57
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcce-------------E---eccCCCCC--------C-cccccChHHHH-h
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSI-------------K---FVENRPFN--------D-QRYFLDDQKLT-S 299 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~-------------~---~~~~~~~~--------~-~~~~~~~~k~~-~ 299 (668)
++||+++++.+|+.|+++.+.+.+|.+..... . +....+.. . .....+.+.++ .
T Consensus 198 ~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 277 (317)
T CHL00194 198 KTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKI 277 (317)
T ss_pred cEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHH
Confidence 89999999999999999999999998643110 0 00000000 0 12234566665 5
Q ss_pred CCCccc--CCHHHHHHHHHHHHhh
Q 005949 300 LGWSER--TIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 300 lG~~~~--~~~~~~l~~~~~~~~~ 321 (668)
||+.|. .++++++++.+.-...
T Consensus 278 ~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 278 FKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred hCCChhhhhhHHHHHHHHHHHHHH
Confidence 899984 6899999988865544
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=251.73 Aligned_cols=258 Identities=10% Similarity=0.075 Sum_probs=185.4
Q ss_pred CCCCCcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhh
Q 005949 379 PRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQS 429 (668)
Q Consensus 379 ~~~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~ 429 (668)
....+++||||||+||||+++++.|+++|++|. ++.+|++|.+++.+++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 334467999999999999999999999998652 234688999999999987
Q ss_pred cCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecc--eeEeec--CCCC-CCCCCCC
Q 005949 430 VKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATG--CIFEYD--AAHP-EGSGIGY 502 (668)
Q Consensus 430 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~--~vy~~~--~~~p-~~~~~~~ 502 (668)
+ |+|||+|+.. +............+.|+.++.+++++|++. ++ ++|+.||. .+|+.. ...| ...+..+
T Consensus 129 ~--d~V~hlA~~~---~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~ 203 (367)
T PLN02686 129 C--AGVFHTSAFV---DPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESW 203 (367)
T ss_pred c--cEEEecCeee---cccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCC
Confidence 6 9999999976 221111122345678999999999999986 67 56666664 477531 1111 0000111
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------HHHHhhcccceeecC---CCcccHhh
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIP---NSMTVLDE 573 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~---~~~~~v~D 573 (668)
.+++.+..|.++|+.||.++|++++.|.+..+++++++||+++|||.. .+..++.+. ...++ .+|+||+|
T Consensus 204 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~-~~~~g~g~~~~v~V~D 282 (367)
T PLN02686 204 SDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGA-QEMLADGLLATADVER 282 (367)
T ss_pred CChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCC-CccCCCCCcCeEEHHH
Confidence 222234456678999999999999998777899999999999999963 123334332 22222 26999999
Q ss_pred HHHHHHHHHhc----cCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC
Q 005949 574 LLPISIEMAKR----NLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 574 ~a~~~~~~~~~----~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g 648 (668)
+|++++.+++. ..+++| +++++.+|+.|+++.+.+.+|.+......+.. ...+.....+|++|+++.++
T Consensus 283 va~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~d~~~~~~d~~kl~~~l~ 355 (367)
T PLN02686 283 LAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSS-----SDDTPARFELSNKKLSRLMS 355 (367)
T ss_pred HHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchh-----hcCCcccccccHHHHHHHHH
Confidence 99999999984 245688 88999999999999999999977554322211 02344456889999999986
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=211.86 Aligned_cols=284 Identities=19% Similarity=0.224 Sum_probs=199.3
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFA 88 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 88 (668)
|+|||||||||++|+..|.+. +++|+++.|......... ...+. ..+.+.+... .++|+|||+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~------~~~v~-------~~~~~~~~~~-~~~DavINLA 64 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNL------HPNVT-------LWEGLADALT-LGIDAVINLA 64 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhc------Ccccc-------ccchhhhccc-CCCCEEEECC
Confidence 689999999999999999998 778888888643211100 11111 1233334431 2799999999
Q ss_pred ccCCcccccC--ChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 89 AQTHVDNSFG--NSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|..-....|. ..++..+..+..|..|.++..+.. +++.||--|.++.||....... +|+.+ ...+.-+..-..
T Consensus 65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~---tE~~~-~g~~Fla~lc~~ 140 (297)
T COG1090 65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVV---TEESP-PGDDFLAQLCQD 140 (297)
T ss_pred CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceee---ecCCC-CCCChHHHHHHH
Confidence 9866544333 456788999999999999998654 3567777777888999875544 55522 223333344444
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCC
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 245 (668)
-|..+.. ++..|.+++.+|.|+|.|+.+ ..++.|+.....+--.+ .++|.|+++|||++|++++|..++++....
T Consensus 141 WE~~a~~-a~~~gtRvvllRtGvVLs~~G---GaL~~m~~~fk~glGG~-~GsGrQ~~SWIhieD~v~~I~fll~~~~ls 215 (297)
T COG1090 141 WEEEALQ-AQQLGTRVVLLRTGVVLSPDG---GALGKMLPLFKLGLGGK-LGSGRQWFSWIHIEDLVNAILFLLENEQLS 215 (297)
T ss_pred HHHHHhh-hhhcCceEEEEEEEEEecCCC---cchhhhcchhhhccCCc-cCCCCceeeeeeHHHHHHHHHHHHhCcCCC
Confidence 5555543 344589999999999999876 45555555444333223 489999999999999999999999999888
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-CC-C-----CcccccChHHHHhCCCccc-CCHHHHHHHHHH
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-PF-N-----DQRYFLDDQKLTSLGWSER-TIWEEGLRKTIE 317 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~-~-----~~~~~~~~~k~~~lG~~~~-~~~~~~l~~~~~ 317 (668)
+.||++.+.|++..++.+.+++.++++....++....+ .. . .....+-.+|+.+.||+++ .+++++|.+.+.
T Consensus 216 Gp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 216 GPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred CcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 99999999999999999999999998754322211000 00 0 1122344567778999999 688999888764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-25 Score=244.30 Aligned_cols=435 Identities=15% Similarity=0.142 Sum_probs=278.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
+++++|||||++.||.++++.|+++ +++|++++|... .+..+... ...++..+.+|+.|++.+.+++.. .
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVE--RARERADS-LGPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 5689999999999999999999999 678888887532 22111111 123567899999999998877743 4
Q ss_pred CCCEEEEcCccCC------cccccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 80 SIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 80 ~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
++|+|||+||... .....+++...+++|+.++..+.+++... +.-.++|++||........
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~--------- 149 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP--------- 149 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC---------
Confidence 6999999999732 12233456678999999999988877643 2123899999965543321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHH-HHHHHcCCCceeecCCCceEec
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKF-ILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...+.+.+.++.+ .+++++.+.||.|-.+......-.... ...... .++ ...+
T Consensus 150 -----~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~ 215 (520)
T PRK06484 150 -----KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRS--RIP-------LGRL 215 (520)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHh--cCC-------CCCC
Confidence 1346999999999999887765 379999999998876532100000000 000000 000 0123
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGW 302 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~ 302 (668)
...+|+++++..++.... .+..+.+.++.. . .+.+.
T Consensus 216 ~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~-~-----------~~~~~----------------------------- 254 (520)
T PRK06484 216 GRPEEIAEAVFFLASDQASYITGSTLVVDGGWT-V-----------YGGSG----------------------------- 254 (520)
T ss_pred cCHHHHHHHHHHHhCccccCccCceEEecCCee-c-----------ccccc-----------------------------
Confidence 467788888777665421 233333322110 0 00000
Q ss_pred cccCCHHHHHHHHHHHHhhCCCcccccCCCCCCCCcccccCCCCCCCCcccccccccccccccccccccccccCCCCCCC
Q 005949 303 SERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVSTNNIQSRMVVPVSKCSSPRKP 382 (668)
Q Consensus 303 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (668)
.....+. + .+ ....
T Consensus 255 -----------------------------~~~~~~~--------------~-~~----------------------~~~~ 268 (520)
T PRK06484 255 -----------------------------PASTAQA--------------P-SP----------------------LAES 268 (520)
T ss_pred -----------------------------CCCCccC--------------C-CC----------------------cccC
Confidence 0000000 0 00 0001
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
.++++||||+|.||.++++.|.++|++| ..+.+|++|++++.++++.. ++|+||
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 348 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLV 348 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 1479999999999999999999999864 23567999998888877653 589999
Q ss_pred EcccccC--CCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 437 h~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
|+||... .+..+...++....+++|+.++.++++++..+ +.+++++||...+.+ .+.
T Consensus 349 ~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~ 410 (520)
T PRK06484 349 NNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA------------------LPP 410 (520)
T ss_pred ECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC------------------CCC
Confidence 9999651 11112233455677899999999999998763 347888888754421 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcc--------cceeecCCCcccHhhHHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY--------NKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~--------~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
...|+.+|...+.+++.+.. ..++++..+.|+.+..+.. ...... ..... ..-+...+|+|++++.
T Consensus 411 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~dia~~~~~ 487 (520)
T PRK06484 411 RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAV--LALKASGRADFDSIRRRIP-LGRLGDPEEVAEAIAF 487 (520)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchh--hhhccccHHHHHHHHhcCC-CCCCcCHHHHHHHHHH
Confidence 46799999999998888642 3589999999998877631 111000 00000 1134568999999999
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+.++.+.++
T Consensus 488 l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 488 LASPAASYVNGATLTVDGG 506 (520)
T ss_pred HhCccccCccCcEEEECCC
Confidence 98643 3446666554
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=227.28 Aligned_cols=271 Identities=17% Similarity=0.212 Sum_probs=202.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCC--------------------------cccccccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGI--------------------------PFEYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~--------------------------~v~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
|.+++||||+||+|++|+++|++++. .|..+.+|++|...+.+++.++ .|+
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~---~Vv 80 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA---VVV 80 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc---eEE
Confidence 34799999999999999999999992 1345567888888888887764 777
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC--CCC
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF--TGS 513 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~--~~~ 513 (668)
|||+.. ..+....+++..+++||.||.+++++|.+.++ ++||.||..|+.+....+ ..+|+.|.+ ..+
T Consensus 81 h~aa~~---~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~------n~~E~~p~p~~~~d 151 (361)
T KOG1430|consen 81 HCAASP---VPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPII------NGDESLPYPLKHID 151 (361)
T ss_pred Eecccc---CccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecc------cCCCCCCCcccccc
Confidence 777755 35556668999999999999999999999999 566667777776554433 345554433 346
Q ss_pred cchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--hH---HHHhh-cccceee-----cCCCcccHhhHHHHHHHHH
Q 005949 514 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NF---ITKIS-RYNKVVN-----IPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~---~~~~~-~~~~~~~-----~~~~~~~v~D~a~~~~~~~ 582 (668)
.|+.||..+|+++++.+....+.++.+|+..+|||+ .+ +..++ .+.-... ...+++|++.++.+++.+.
T Consensus 152 ~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~ 231 (361)
T KOG1430|consen 152 PYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAA 231 (361)
T ss_pred ccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHH
Confidence 999999999999999876678999999999999998 22 22233 3322222 2338999999998888765
Q ss_pred h----cc---CCceeeecCCCccCHHHHHHHHHhhcCCCCC-CCCCCHHHhh---------hhhcc-CCC----------
Q 005949 583 K----RN---LRGIWNFTNPGVVSHNEILEMYKKYINPEFK-WVNFTLEEQA---------KVIVA-PRS---------- 634 (668)
Q Consensus 583 ~----~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~---------~~~~~-~~~---------- 634 (668)
. +. .++.|+|.++.++...++...+.+.+|...+ ...+|..... ..... .++
T Consensus 232 ~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~ 311 (361)
T KOG1430|consen 232 RALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALL 311 (361)
T ss_pred HHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeee
Confidence 3 22 5779999999999999999999999999887 3434432110 00011 111
Q ss_pred --CCccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 635 --NNEMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 635 --~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
....|+.|+++.+| +..++++++.+++.+..
T Consensus 312 ~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~ 346 (361)
T KOG1430|consen 312 GVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVA 346 (361)
T ss_pred ccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHh
Confidence 33569999999999 77999999999998653
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=236.09 Aligned_cols=198 Identities=24% Similarity=0.335 Sum_probs=168.5
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|||+||+||||++++++|+++|+.| .++.+|+.|.+.+.++++..++|+|||+|+.. .
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~---~ 77 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS---S 77 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS---S
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc---c
Confidence 7999999999999999999999863 35568999999999999999999999999965 2
Q ss_pred ccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 447 VDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 447 ~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
......++...++.|+.++.+++++|++.++ +++++||+.+|+.....+ ..|+.+..|.+.|+.+|..+|++
T Consensus 78 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~-------~~e~~~~~~~~~Y~~~K~~~e~~ 150 (236)
T PF01370_consen 78 NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEP-------IDEDSPINPLSPYGASKRAAEEL 150 (236)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSS-------BETTSGCCHSSHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccccccc
Confidence 3333467888899999999999999999998 899999999998874443 34444447789999999999999
Q ss_pred HHhccCeeEeEEeeeecCCCCChh-----------hHHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhccC--C
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRNL--R 587 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~--~ 587 (668)
++.+.+.++++++++|++++|||. .++.++.++++....+ .+++|++|+|++++.+++++. +
T Consensus 151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 230 (236)
T PF01370_consen 151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAG 230 (236)
T ss_dssp HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTT
T ss_pred ccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCC
Confidence 999987789999999999999998 3666777776544333 289999999999999999875 8
Q ss_pred ceeeec
Q 005949 588 GIWNFT 593 (668)
Q Consensus 588 g~~ni~ 593 (668)
++|||+
T Consensus 231 ~~yNig 236 (236)
T PF01370_consen 231 GIYNIG 236 (236)
T ss_dssp EEEEES
T ss_pred CEEEeC
Confidence 999996
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=239.30 Aligned_cols=255 Identities=14% Similarity=0.107 Sum_probs=184.4
Q ss_pred CCCCCcEEEEE----cCCcchhHHHHHHHHHcCCccccccccc--------------------------CChhHHHHHhh
Q 005949 379 PRKPSMKFLIY----GRTGWIGGLLGKLCEKEGIPFEYGKGRL--------------------------EDCSSLIADVQ 428 (668)
Q Consensus 379 ~~~~~mkvli~----G~~G~iG~~l~~~l~~~g~~v~~~~~D~--------------------------~d~~~~~~~l~ 428 (668)
...++|||+|| |||||||++|++.|+++||+|..+..+. .|..++.+.+.
T Consensus 48 ~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~ 127 (378)
T PLN00016 48 AAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVA 127 (378)
T ss_pred cccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhc
Confidence 34456799999 9999999999999999999875443221 12333455555
Q ss_pred hcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 429 SVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 429 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
..++|+|||+++.. ..++.+|+++|++.|+ ++|++||..+|+.....| ..| +.
T Consensus 128 ~~~~d~Vi~~~~~~-------------------~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p------~~E-~~ 181 (378)
T PLN00016 128 GAGFDVVYDNNGKD-------------------LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPP------HVE-GD 181 (378)
T ss_pred cCCccEEEeCCCCC-------------------HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCC------CCC-CC
Confidence 45689999997621 4578899999999999 688889989997654333 333 33
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh-------hHHHHhhcccceeecC-----CCcccHhhHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIP-----NSMTVLDELL 575 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~-----~~~~~v~D~a 575 (668)
+..|.+ +|..+|++++. .+++++++|++++|||. .++..+..+.+....+ .+++|++|+|
T Consensus 182 ~~~p~~----sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva 253 (378)
T PLN00016 182 AVKPKA----GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLA 253 (378)
T ss_pred cCCCcc----hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHH
Confidence 444422 89999998865 47899999999999985 2445555555433222 2799999999
Q ss_pred HHHHHHHhcc--CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhh----hhccCCCCCccChhHHHhhcC-
Q 005949 576 PISIEMAKRN--LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAK----VIVAPRSNNEMDASKLKKEFP- 648 (668)
Q Consensus 576 ~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~ld~~k~~~~~g- 648 (668)
+++..+++++ .+++||+++++.+|+.|+++.+++.+|.+..+...+...... ..+.......+|++|+++.+|
T Consensus 254 ~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw 333 (378)
T PLN00016 254 SMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGW 333 (378)
T ss_pred HHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCC
Confidence 9999999874 468999999999999999999999999876543322211100 001111233469999999888
Q ss_pred -CccChHHHHHHHHhccCCC
Q 005949 649 -ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 649 -~~~~~~~~l~~~~~~~~~~ 667 (668)
+..+++++|.++++|+.++
T Consensus 334 ~p~~~l~egl~~~~~~~~~~ 353 (378)
T PLN00016 334 TPKFDLVEDLKDRYELYFGR 353 (378)
T ss_pred CCCCCHHHHHHHHHHHHHhc
Confidence 4468999999999998643
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-26 Score=235.18 Aligned_cols=236 Identities=19% Similarity=0.259 Sum_probs=184.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC--CCcCCCCeEEEEccCCCHHHHHHHhccC--C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVKGDIASADLVNFLLITE--S 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~ 80 (668)
++++|||||||||||+++++.|+++ +++|++++|........... ......+++++.+|++|.+.+..++... +
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4679999999999999999999998 67888888864221100000 0011246899999999999999988543 6
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|+||||++.... .....+++|+.++.++++++++.+ +++||++||.++|+ |...|.
T Consensus 137 ~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~-----------------p~~~~~ 193 (390)
T PLN02657 137 VDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK-----------------PLLEFQ 193 (390)
T ss_pred CcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC-----------------cchHHH
Confidence 9999999885321 123457889999999999999977 89999999987753 234589
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE-eceeHHHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR-SYLYCEDVAEAFECIL 239 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~ai~~~~ 239 (668)
.+|..+|..++. .+.+++++++||+.+||+.. .++..+..++++.+.++|...+ ++||++|+|+++..++
T Consensus 194 ~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~-------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~ 264 (390)
T PLN02657 194 RAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG-------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV 264 (390)
T ss_pred HHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH-------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence 999999999875 34589999999999997532 2345566778877788887755 5799999999999888
Q ss_pred hcC-CCCceEEEcCC-CcccHHHHHHHHHHHhCCCCC
Q 005949 240 HKG-EVGHVYNVGTK-KERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 240 ~~~-~~~~~~ni~~~-~~~s~~el~~~i~~~~g~~~~ 274 (668)
+.+ ..+++||++++ +.+|+.|+++.+.+.+|.++.
T Consensus 265 ~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~ 301 (390)
T PLN02657 265 LDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK 301 (390)
T ss_pred hCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence 654 35789999985 589999999999999998644
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=228.33 Aligned_cols=249 Identities=18% Similarity=0.193 Sum_probs=182.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|||+|||||||||++++++|+++||+| +++.+|++|++++.++++++ |+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~--d~Vi~~~~~~--- 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGV--TAIIDASTSR--- 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCC--CEEEECCCCC---
Confidence 699999999999999999999999965 34567899999999999986 9999997632
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
..++..++++|+.++.+++++|++.+++ +|++||..+. . .+.++|..+|..+|+
T Consensus 76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~----------------~----~~~~~~~~~K~~~e~ 130 (317)
T CHL00194 76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE----------------Q----YPYIPLMKLKSDIEQ 130 (317)
T ss_pred -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc----------------c----cCCChHHHHHHHHHH
Confidence 2345667889999999999999999994 5555553221 0 012468999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChh--hHHHHhhccccee----ecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCC
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVV----NIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPG 596 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~ 596 (668)
++.. .+++++++|++++|+.. .+...++.+.+.. ....+++|++|+|+++..+++++ .+++||+++++
T Consensus 131 ~l~~----~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~ 206 (317)
T CHL00194 131 KLKK----SGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPK 206 (317)
T ss_pred HHHH----cCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCC
Confidence 8865 57899999999887642 1222233222221 12338899999999999999754 57899999999
Q ss_pred ccCHHHHHHHHHhhcCCCCCCCCCCHHHhhh--hhcc---------C---------CCCC-ccChhHHHhhcC-C---cc
Q 005949 597 VVSHNEILEMYKKYINPEFKWVNFTLEEQAK--VIVA---------P---------RSNN-EMDASKLKKEFP-E---LL 651 (668)
Q Consensus 597 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--~~~~---------~---------~~~~-~ld~~k~~~~~g-~---~~ 651 (668)
.+|++|+++.+.+.+|.+..+..+|...... .... . ..+. ..+.+++++.+| . +.
T Consensus 207 ~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 286 (317)
T CHL00194 207 SWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELI 286 (317)
T ss_pred ccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhh
Confidence 9999999999999999987766666432210 0000 0 0112 346778888988 3 35
Q ss_pred ChHHHHHHHHhccCC
Q 005949 652 SIKDSLIKYVFEPNK 666 (668)
Q Consensus 652 ~~~~~l~~~~~~~~~ 666 (668)
++++.+.+++..+.+
T Consensus 287 ~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 287 SLEDYFQEYFERILK 301 (317)
T ss_pred hHHHHHHHHHHHHHH
Confidence 788888888766543
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-26 Score=230.16 Aligned_cols=238 Identities=16% Similarity=0.172 Sum_probs=176.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC--Ccc----------------------cccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG--IPF----------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g--~~v----------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
|+|+||||+||||+++++.|+++| ++| .++.+|++|.+.+.++++++ |+|||+|
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~i--D~Vih~A 82 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGV--DYVVHAA 82 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcC--CEEEECc
Confidence 689999999999999999999986 433 24567999999999888865 9999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
|.. .+.....++...+++|+.|+.+++++|.+.++ ++|++||... ..|.++|+.|
T Consensus 83 g~~---~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~---------------------~~p~~~Y~~s 138 (324)
T TIGR03589 83 ALK---QVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA---------------------ANPINLYGAT 138 (324)
T ss_pred ccC---CCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC---------------------CCCCCHHHHH
Confidence 976 34444556778899999999999999999987 5677777421 1234789999
Q ss_pred HHHHHHHHHhc---cCeeEeEEeeeecCCCCChh-----hHHHHhhcccceeec-----CCCcccHhhHHHHHHHHHhcc
Q 005949 519 KAMVEELLKEY---DNVCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNI-----PNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 519 K~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|..+|+++..+ ....+++++++|++++|||+ .|...+..+...... ..+|+|++|+|++++.++++.
T Consensus 139 K~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~ 218 (324)
T TIGR03589 139 KLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM 218 (324)
T ss_pred HHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC
Confidence 99999998764 34579999999999999985 333334334322222 127899999999999999875
Q ss_pred -CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCC-CCCccChhHHHhhcC--CccChHHHHH
Q 005949 586 -LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPR-SNNEMDASKLKKEFP--ELLSIKDSLI 658 (668)
Q Consensus 586 -~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ld~~k~~~~~g--~~~~~~~~l~ 658 (668)
.+.+| ++++..+++.|+++.+.+...... .. ..+.+. ....+|++|+++.+| +..++++++.
T Consensus 219 ~~~~~~-~~~~~~~sv~el~~~i~~~~~~~~--~~--------~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 219 LGGEIF-VPKIPSMKITDLAEAMAPECPHKI--VG--------IRPGEKLHEVMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred CCCCEE-ccCCCcEEHHHHHHHHHhhCCeeE--eC--------CCCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence 34567 577788999999999998643221 11 112222 123479999998877 4456666654
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=225.54 Aligned_cols=254 Identities=20% Similarity=0.245 Sum_probs=184.6
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-cccc---------CCCcCC-CCeEEEEccCCCH------H
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNL---------IPSKAS-SNFKFVKGDIASA------D 70 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~---------~~~~~~-~~~~~~~~Dl~d~------~ 70 (668)
+|||||||||||++|++.|+++|+..+|+++.|...... .+.+ ...... .+++++.+|+.++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999999976688999988643210 0000 000001 4789999999754 4
Q ss_pred HHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 71 LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 71 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.+..+. .++|+|||+|+.... ........+.|+.++.+++++|.+.+ +++||++||.++|+....... ..++.
T Consensus 81 ~~~~~~--~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~-~~~~~ 153 (367)
T TIGR01746 81 EWERLA--ENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTV-TEDDA 153 (367)
T ss_pred HHHHHH--hhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCc-ccccc
Confidence 455555 679999999997653 23445677899999999999999866 788999999999987543221 11111
Q ss_pred ---CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCCceeecCCC-ce
Q 005949 151 ---SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFILLAMRGLPLPIHGDGS-NV 222 (668)
Q Consensus 151 ---~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 222 (668)
....+.+.|+.+|..+|.+++.+.+. +++++++||+.++|+... ....+..+++.....+.. +... ..
T Consensus 154 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~---p~~~~~~ 229 (367)
T TIGR01746 154 IVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY---PDSPELT 229 (367)
T ss_pred ccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC---CCCCccc
Confidence 11223567999999999999887655 899999999999997432 123444454444333322 2222 36
Q ss_pred EeceeHHHHHHHHHHHHhcCCC---CceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGEV---GHVYNVGTKKERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~~---~~~~ni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
++|+|++|++++++.++..+.. +++||+++++++++.|+++.+.+ +|.+.
T Consensus 230 ~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 230 EDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred cCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence 7899999999999998876653 78999999999999999999998 77653
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=224.30 Aligned_cols=249 Identities=11% Similarity=0.019 Sum_probs=173.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
++|+||||+||||++++++|+++||+|. ++.+|++|.+++.+.+.++ |.|+|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~--d~v~~ 84 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGC--SGLFC 84 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCC--CEEEE
Confidence 5799999999999999999999998652 2346888888888888876 99999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeec-CCCCCCCCCCCCCCCCCCCC---
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYD-AAHPEGSGIGYKEEDTPNFT--- 511 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~-~~~p~~~~~~~~ee~~~~~~--- 511 (668)
+++.. . . ...+...++++|+.|+.+++++|.+. ++ ++|++||..+++.. ...+ ... ..+|+.+..+
T Consensus 85 ~~~~~---~-~-~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~--~~~-~~~E~~~~~~~~~ 156 (297)
T PLN02583 85 CFDPP---S-D-YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNIS--TQK-DVDERSWSDQNFC 156 (297)
T ss_pred eCccC---C-c-ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCC--CCC-CCCcccCCCHHHH
Confidence 87644 1 1 11234678899999999999999986 45 67777887655321 1110 011 2344443322
Q ss_pred ---CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHH-HHhhcccce--eecCCCcccHhhHHHHHHHHHhcc
Q 005949 512 ---GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFI-TKISRYNKV--VNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 512 ---~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~-~~~~~~~~~--~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
...|+.||.++|++++.|.+..+++++++||+++|||.... ...+.+... .....+++|++|+|++++.+++.+
T Consensus 157 ~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~ 236 (297)
T PLN02583 157 RKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV 236 (297)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc
Confidence 23799999999999999876679999999999999997321 112222111 111237999999999999999965
Q ss_pred -CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC
Q 005949 586 -LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 586 -~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g 648 (668)
..|.|+++++......++++++++.+.. .++.... . ..........++++|+++++.
T Consensus 237 ~~~~r~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~-~----~~~~~~~~~~~~~~k~~~l~~ 294 (297)
T PLN02583 237 SSYGRYLCFNHIVNTEEDAVKLAQMLSPL-IPSPPPY-E----MQGSEVYQQRIRNKKLNKLME 294 (297)
T ss_pred ccCCcEEEecCCCccHHHHHHHHHHhCCC-CCCCCcc-c----ccCCCccccccChHHHHHhCc
Confidence 5678999986666678899999988542 2211100 0 001112345789999998753
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=231.91 Aligned_cols=260 Identities=23% Similarity=0.279 Sum_probs=187.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccCC-cccc----CC----------------CcCCCCeEE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSN-LKNL----IP----------------SKASSNFKF 61 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~-~~~~----~~----------------~~~~~~~~~ 61 (668)
+.+++|||||||||||++|++.|++.++++ +|+++.|...... .+.+ .. .....++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 467999999999999999999999886654 8888888643221 1111 00 001347899
Q ss_pred EEccCCCH------HHHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccc
Q 005949 62 VKGDIASA------DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV 135 (668)
Q Consensus 62 ~~~Dl~d~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v 135 (668)
+.+|++++ +....+. .++|+|||+|+....+ .++...+++|+.|+.+++++|++.+.+++|||+||+.|
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~--~~vDiVIH~AA~v~f~---~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV 271 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIA--KEVDVIINSAANTTFD---ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV 271 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHH--hcCCEEEECccccccc---cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence 99999997 3444444 5699999999987642 45778899999999999999998766889999999999
Q ss_pred cCCCCCCcCC-CCC-----------------------------------C-C-C-----------------CCCCCChhH
Q 005949 136 YGETDEDAVV-GNH-----------------------------------E-A-S-----------------QLLPTNPYS 160 (668)
Q Consensus 136 yg~~~~~~~~-~~~-----------------------------------e-~-~-----------------~~~p~~~Y~ 160 (668)
||...+...+ .+. + . . ...-.|.|.
T Consensus 272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt 351 (605)
T PLN02503 272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351 (605)
T ss_pred ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence 9987421110 000 0 0 0 011137899
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCce----------eCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNV----------YGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v----------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
.+|.++|.+++++. .++|++|+||+.| ++++.. ...+.+.. ..+|.--.++++++...++|+||.
T Consensus 352 ~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~--~~~p~~~~-~g~G~lr~~~~~~~~~~DiVPVD~ 426 (605)
T PLN02503 352 FTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNR--MMDPIVLY-YGKGQLTGFLADPNGVLDVVPADM 426 (605)
T ss_pred HHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCcc--ccchhhhh-eeccceeEEEeCCCeeEeEEeecH
Confidence 99999999998765 3799999999999 555431 12222222 224433336788999999999999
Q ss_pred HHHHHHHHHhc-----CCCCceEEEcCC--CcccHHHHHHHHHHHhCCCC
Q 005949 231 VAEAFECILHK-----GEVGHVYNVGTK--KERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 231 ~a~ai~~~~~~-----~~~~~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 273 (668)
++.+++.++.. ...+.+||++++ .++++.++.+.+.+.+...|
T Consensus 427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P 476 (605)
T PLN02503 427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP 476 (605)
T ss_pred HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence 99999887431 124679999988 89999999999998775544
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=216.22 Aligned_cols=205 Identities=20% Similarity=0.209 Sum_probs=159.1
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCc---------------------------c----cccccccCChhHHHHHhhhcCCCE
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIP---------------------------F----EYGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~---------------------------v----~~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
||||||+|.||+.|+++|++.+-. + ..+.+|++|.+.+..+++..+||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799999999999999999999741 1 124789999999999999999999
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
|||+||+- ++..++.+|.+.+++|+.||.|++++|.++++ ++|++||+-. .+|.|
T Consensus 81 VfHaAA~K---hVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA---------------------v~Ptn 136 (293)
T PF02719_consen 81 VFHAAALK---HVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA---------------------VNPTN 136 (293)
T ss_dssp EEE---------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC---------------------SS--S
T ss_pred EEEChhcC---CCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc---------------------CCCCc
Confidence 99999999 79999999999999999999999999999999 6777788542 35679
Q ss_pred cchhhHHHHHHHHHhccCee---EeEEeeeecCCCCChh-----hHHHHhhcccceeecC----CCcccHhhHHHHHHHH
Q 005949 514 FYSKTKAMVEELLKEYDNVC---TLRVRMPISSDLNNPR-----NFITKISRYNKVVNIP----NSMTVLDELLPISIEM 581 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~~---~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~----~~~~~v~D~a~~~~~~ 581 (668)
.||.||+.+|+++..+.... ..+++++|++||.|-+ -|..++.++++..... ..|+.++++++.++.+
T Consensus 137 vmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a 216 (293)
T PF02719_consen 137 VMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQA 216 (293)
T ss_dssp HHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHH
Confidence 99999999999999986544 7899999999999976 5888888888765433 3788899999999999
Q ss_pred Hhcc-CCceeeecCCCccCHHHHHHHHHhhcCCC
Q 005949 582 AKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPE 614 (668)
Q Consensus 582 ~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~ 614 (668)
.... .+++|-.--|+++++.|+++.+.+..|..
T Consensus 217 ~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 217 AALAKGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp HHH--TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred HhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 8765 56689888899999999999999998853
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-25 Score=222.28 Aligned_cols=260 Identities=15% Similarity=0.123 Sum_probs=176.6
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcccccccccCCh-------------hHHHHHhhhcCCCEEEEcccccCCCCcccccc
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC-------------SSLIADVQSVKPTHVFNAAGVTGRPNVDWCES 452 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~-------------~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~ 452 (668)
||||||+||||+++++.|+++|++|..+..+.... ..+...+. ++|+|||+|+.... ...+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~D~Vvh~a~~~~~-~~~~~~~ 77 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALE--GADAVINLAGEPIA-DKRWTEE 77 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcC--CCCEEEECCCCCcc-cccCCHH
Confidence 68999999999999999999999875544332211 12223343 46999999996510 0123334
Q ss_pred ccccceehhhhhhHHHHHHHHHcCC-cEEEEecc--eeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhc
Q 005949 453 HKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATG--CIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529 (668)
Q Consensus 453 ~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~--~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~ 529 (668)
.+..++++|+.++.+|+++|++.++ +.++++|| .+|+.....+ .+|+.+..+.+.|+..|...|+.+..+
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~-------~~E~~~~~~~~~~~~~~~~~e~~~~~~ 150 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRV-------FTEEDSPAGDDFLAELCRDWEEAAQAA 150 (292)
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCC-------cCcccCCCCCChHHHHHHHHHHHhhhc
Confidence 5567788999999999999999987 34444333 4565433333 344444445567778888888877654
Q ss_pred cCeeEeEEeeeecCCCCChhh-HHHHh---hc---ccce--eecCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccC
Q 005949 530 DNVCTLRVRMPISSDLNNPRN-FITKI---SR---YNKV--VNIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVS 599 (668)
Q Consensus 530 ~~~~~l~~~~~r~~~~~g~~~-~~~~~---~~---~~~~--~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s 599 (668)
. ..+++++++|++++|||.. +...+ .. .... .....+++|++|+|+++..+++++ ..|+||+++++.+|
T Consensus 151 ~-~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s 229 (292)
T TIGR01777 151 E-DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVR 229 (292)
T ss_pred h-hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccC
Confidence 3 3589999999999999952 22221 11 1111 112238999999999999999874 67899999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHhhhhh---cc-CCCCCccChhHHHhhcCCc--cChHHHH
Q 005949 600 HNEILEMYKKYINPEFKWVNFTLEEQAKVI---VA-PRSNNEMDASKLKKEFPEL--LSIKDSL 657 (668)
Q Consensus 600 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~---~~-~~~~~~ld~~k~~~~~g~~--~~~~~~l 657 (668)
+.|+++.+++.+|.+.. ..+|........ +. -..+.+++++|++++++++ ++++|+|
T Consensus 230 ~~di~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 230 NKEFAKALARALHRPAF-FPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred HHHHHHHHHHHhCCCCc-CcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 99999999999998754 335544322111 11 1135678999999865532 4677653
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-25 Score=200.44 Aligned_cols=266 Identities=17% Similarity=0.144 Sum_probs=192.4
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcccccccccC-----------ChhHHHHHhhhcCCCEEEEcccccCCCCcccccccc
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE-----------DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHK 454 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~-----------d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~ 454 (668)
|+|||||||||++|+..|.+.||.|.++.++.. ..+.+.+.... .+|+|||+||.+. -.-+|+....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~-~~DavINLAG~~I-~~rrWt~~~K 78 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTL-GIDAVINLAGEPI-AERRWTEKQK 78 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccC-CCCEEEECCCCcc-ccccCCHHHH
Confidence 689999999999999999999999977765532 12334444442 4699999999883 1334888888
Q ss_pred ccceehhhhhhHHHHHHHHHcCC-cEEEEecc-eeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCe
Q 005949 455 TDTIRTNVAGTLTLADVCRDHGI-LMMNYATG-CIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNV 532 (668)
Q Consensus 455 ~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 532 (668)
+.++++.+..|..|.++..+... +.+++|.| ..|+++... ..++|++ +. ..++-+..-..+|+.+.....
T Consensus 79 ~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~-----~~~tE~~-~~-g~~Fla~lc~~WE~~a~~a~~- 150 (297)
T COG1090 79 EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGD-----RVVTEES-PP-GDDFLAQLCQDWEEEALQAQQ- 150 (297)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCc-----eeeecCC-CC-CCChHHHHHHHHHHHHhhhhh-
Confidence 99999999999999999997654 33555544 445554432 2255553 32 336777788888888877644
Q ss_pred eEeEEeeeecCCCCChh-hHHHHhhc------cccee--ecCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHH
Q 005949 533 CTLRVRMPISSDLNNPR-NFITKISR------YNKVV--NIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 533 ~~l~~~~~r~~~~~g~~-~~~~~~~~------~~~~~--~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e 602 (668)
.+.|++++|.+.|.++. .++.+++. |++.- .++.+|||++|++++|..++++. ..|.||+++|.+++.++
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~ 230 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKE 230 (297)
T ss_pred cCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHHH
Confidence 68999999999999875 44444432 22211 34559999999999999999985 89999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCHHHhhhhhccCC-----CCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 603 ILEMYKKYINPEFKWVNFTLEEQAKVIVAPR-----SNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 603 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
|...+++.++.+.. ..+|..... ...... ...+.-+.|+.+.+. ..++++++|.+.++.
T Consensus 231 F~~al~r~l~RP~~-~~vP~~~~r-l~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~~ 296 (297)
T COG1090 231 FAHALGRALHRPAI-LPVPSFALR-LLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILKR 296 (297)
T ss_pred HHHHHHHHhCCCcc-ccCcHHHHH-HHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHhc
Confidence 99999999997654 233322111 111122 244667888888876 569999999998764
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=231.01 Aligned_cols=219 Identities=14% Similarity=0.155 Sum_probs=158.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC------------------------------------------------ccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI------------------------------------------------PFEYGKG 415 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~------------------------------------------------~v~~~~~ 415 (668)
++|+|||||||||++|++.|++.+. ++.++.+
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G 91 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG 91 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence 5799999999999999999887532 1234567
Q ss_pred ccC-------ChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecce
Q 005949 416 RLE-------DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGC 486 (668)
Q Consensus 416 D~~-------d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~ 486 (668)
|++ +.+.++.++++ +|+|||+||.. +. ..++...+++|+.||.+|+++|++. ++ +++|+||++
T Consensus 92 Dl~~~~LGLs~~~~~~~l~~~--vD~ViH~AA~v---~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 92 DISYDDLGVKDSNLREEMWKE--IDIVVNLAATT---NF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred ccCCcCCCCChHHHHHHHHhC--CCEEEECcccc---CC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 776 33445556664 59999999976 22 2467788899999999999999986 56 688889999
Q ss_pred eEeecCCCCCCCCCCCCCCC-------------------------------------------C---CCCCCCcchhhHH
Q 005949 487 IFEYDAAHPEGSGIGYKEED-------------------------------------------T---PNFTGSFYSKTKA 520 (668)
Q Consensus 487 vy~~~~~~p~~~~~~~~ee~-------------------------------------------~---~~~~~~~Y~~sK~ 520 (668)
|||.....- ++.++..++ . ...+.+.|+.||.
T Consensus 164 vyG~~~~~i--~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~ 241 (491)
T PLN02996 164 VCGEKSGLI--LEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA 241 (491)
T ss_pred EecCCCcee--eeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence 998643210 001111000 0 1112378999999
Q ss_pred HHHHHHHhccCeeEeEEeeeecCCCCChhh-----HHHH------h----hcccceeec-----CCCcccHhhHHHHHHH
Q 005949 521 MVEELLKEYDNVCTLRVRMPISSDLNNPRN-----FITK------I----SRYNKVVNI-----PNSMTVLDELLPISIE 580 (668)
Q Consensus 521 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----~~~~------~----~~~~~~~~~-----~~~~~~v~D~a~~~~~ 580 (668)
++|+++..+.. +++++++||++++||.+ |+.. + .++...... ..+++||||+|++++.
T Consensus 242 ~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~ 319 (491)
T PLN02996 242 MGEMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIV 319 (491)
T ss_pred HHHHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHH
Confidence 99999998754 79999999999999852 2221 2 222222222 2399999999999999
Q ss_pred HHhcc-----CCceeeecCC--CccCHHHHHHHHHhhcCCC
Q 005949 581 MAKRN-----LRGIWNFTNP--GVVSHNEILEMYKKYINPE 614 (668)
Q Consensus 581 ~~~~~-----~~g~~ni~~~--~~~s~~e~~~~i~~~~g~~ 614 (668)
++.+. .+.+||++++ .++|+.|+++.+.+.++..
T Consensus 320 a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~ 360 (491)
T PLN02996 320 AMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360 (491)
T ss_pred HHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence 98752 3468999999 8999999999999987654
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-23 Score=222.92 Aligned_cols=235 Identities=17% Similarity=0.182 Sum_probs=170.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
||||||||+||||++|++.|+++ +++|++++|.... ....+++++.+|+.|.. +.+++ .++|+|||
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~---------~~~~~ve~v~~Dl~d~~-l~~al--~~~D~VIH 66 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHD---------ALDPRVDYVCASLRNPV-LQELA--GEADAVIH 66 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhh---------cccCCceEEEccCCCHH-HHHHh--cCCCEEEE
Confidence 48999999999999999999999 6789999875321 01246889999999985 66776 57999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+.... . ....|+.++.+++++|++.+ + ++||+||. ||... .|. .+
T Consensus 67 LAa~~~~-----~---~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~--~G~~~-----------------~~~----~a 113 (699)
T PRK12320 67 LAPVDTS-----A---PGGVGITGLAHVANAAARAG-A-RLLFVSQA--AGRPE-----------------LYR----QA 113 (699)
T ss_pred cCccCcc-----c---hhhHHHHHHHHHHHHHHHcC-C-eEEEEECC--CCCCc-----------------ccc----HH
Confidence 9986421 1 12579999999999999987 5 79999986 33211 122 36
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
|.++.. ++++++++|++++|||+... .+++..+++....++++. ++|++|++++++.+++.+.
T Consensus 114 E~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~----------vIyVdDvv~alv~al~~~~- 178 (699)
T PRK12320 114 ETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR----------VLHLDDLVRFLVLALNTDR- 178 (699)
T ss_pred HHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE----------EEEHHHHHHHHHHHHhCCC-
Confidence 666543 36899999999999997543 245666665554544433 4899999999999998654
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHH
Q 005949 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEE 310 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~ 310 (668)
+++||+++++.+|+.|+++.+........ +. .........-+...++ .++|.|+++|+.
T Consensus 179 ~GiyNIG~~~~~Si~el~~~i~~~~p~~~---~~----~~~~~~~~~pdi~~a~~~~~w~~~~~~~~ 238 (699)
T PRK12320 179 NGVVDLATPDTTNVVTAWRLLRSVDPHLR---TR----RVRSWEQLIPEVDIAAVQEDWNFEFGWQA 238 (699)
T ss_pred CCEEEEeCCCeeEHHHHHHHHHHhCCCcc---cc----ccccHHHhCCCCchhhhhcCCCCcchHHH
Confidence 35999999999999999998876632111 11 1111122345666665 589999987753
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=234.44 Aligned_cols=231 Identities=15% Similarity=0.195 Sum_probs=171.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCCcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVD 448 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~ 448 (668)
|||+||||+||||+++++.|+++|++| .++.+|++|.+++.++++++ |+|||+|+.. ..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~~v--D~VVHlAa~~---~~- 74 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGA--DVVAHCAWVR---GR- 74 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHhCC--CEEEECCCcc---cc-
Confidence 689999999999999999999999865 24567899999999888865 9999999855 11
Q ss_pred ccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHH
Q 005949 449 WCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLK 527 (668)
Q Consensus 449 ~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~ 527 (668)
.+++|+.++.+++++|++.++ ++|++||.. |..+|+++.
T Consensus 75 --------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------------------K~aaE~ll~ 114 (854)
T PRK05865 75 --------NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------------------QPRVEQMLA 114 (854)
T ss_pred --------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------------------HHHHHHHHH
Confidence 467999999999999999998 455655520 899999886
Q ss_pred hccCeeEeEEeeeecCCCCChh--hHHHHhhcccceee----cCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccC
Q 005949 528 EYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVVN----IPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVS 599 (668)
Q Consensus 528 ~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~----~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s 599 (668)
. ++++++++|++++|||. +++..+........ ...+|+|++|+|++++.++++. .+++||+++++.+|
T Consensus 115 ~----~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~S 190 (854)
T PRK05865 115 D----CGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELT 190 (854)
T ss_pred H----cCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCccc
Confidence 5 47999999999999996 46655543221111 1227999999999999998643 57899999999999
Q ss_pred HHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhccCC
Q 005949 600 HNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 600 ~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
++|+++.+.+.... ..+.... ..+.. ..........+|++|+++.+| +..+++++|.++++++..
T Consensus 191 i~EIae~l~~~~~~v~~~~~~~-~~~~~-~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ 258 (854)
T PRK05865 191 FRRIAAALGRPMVPIGSPVLRR-VTSFA-ELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRG 258 (854)
T ss_pred HHHHHHHHhhhhccCCchhhhh-ccchh-hhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998875311 0000000 00000 000011133689999999888 456899999999998753
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=187.55 Aligned_cols=306 Identities=22% Similarity=0.256 Sum_probs=226.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC---ccccCCC---cCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIPS---KASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
.|..||||-||+=|+.|++.|+.+ +++|.++-|+.+.-+ .+.+... ..........+|++|...+..++...
T Consensus 28 rkvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 357899999999999999999999 566666555443222 2222211 12345789999999999999999888
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCC--CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 157 (668)
+++-|+|+|++.++..+++-++-..++...||.+|+++.+.++- --||-..||+..||...+.+. .|.+|.-|.+
T Consensus 106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQ---sE~TPFyPRS 182 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQ---SETTPFYPRS 182 (376)
T ss_pred CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCc---ccCCCCCCCC
Confidence 99999999999999888887777778889999999999998752 238889999999997765544 7899999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHH-HHHHH---H-HcCCCceeecCCCceEeceeHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIP-KFILL---A-MRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~---~-~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
||+.+|..+--.+-+|.+.+++-.+-=-+.+--.|.... +++. .+.+. + +....-...++-...|+|-|..|-+
T Consensus 183 PYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGe-nFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYV 261 (376)
T KOG1372|consen 183 PYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGE-NFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYV 261 (376)
T ss_pred hhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcccc-chhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHH
Confidence 999999999888888887776655543333433444322 2322 22222 2 2222333358888999999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc----------------ceEecc--CCCCCCcccccCh
Q 005949 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPET----------------SIKFVE--NRPFNDQRYFLDD 294 (668)
Q Consensus 233 ~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~----------------~~~~~~--~~~~~~~~~~~~~ 294 (668)
+|++.++++..+ .-|.++.++..|++|+.+.-...+|..... .+...+ -+|.......-|.
T Consensus 262 EAMW~mLQ~d~P-dDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGda 340 (376)
T KOG1372|consen 262 EAMWLMLQQDSP-DDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDA 340 (376)
T ss_pred HHHHHHHhcCCC-CceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCCh
Confidence 999999988765 479999999999999999877777632110 111111 2333444456789
Q ss_pred HHHH-hCCCcccCCHHHHHHHHHHH
Q 005949 295 QKLT-SLGWSERTIWEEGLRKTIEW 318 (668)
Q Consensus 295 ~k~~-~lG~~~~~~~~~~l~~~~~~ 318 (668)
+|++ .|||+|++++++.++++++.
T Consensus 341 sKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 341 SKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred HHHHHhhCCCCccCHHHHHHHHHHh
Confidence 9997 59999999999999999863
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=215.85 Aligned_cols=205 Identities=18% Similarity=0.189 Sum_probs=179.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc---------------------------ccccccccCChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP---------------------------FEYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~---------------------------v~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
++|+||||+|-||+.+++++++.+.+ +.++-+|+.|.+.++.++++++||+||
T Consensus 251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~Vf 330 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVF 330 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEE
Confidence 47999999999999999999999752 345668999999999999999999999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
|+||+- +|..++.+|.+.+++|+.||.|++++|.++++ ++|.+||+- ..+|.|.|
T Consensus 331 HAAA~K---HVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK---------------------AV~PtNvm 386 (588)
T COG1086 331 HAAALK---HVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK---------------------AVNPTNVM 386 (588)
T ss_pred Ehhhhc---cCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc---------------------ccCCchHh
Confidence 999999 78889999999999999999999999999999 677778853 23567999
Q ss_pred hhhHHHHHHHHHhccCe-e--EeEEeeeecCCCCChh-----hHHHHhhcccceeec----CCCcccHhhHHHHHHHHHh
Q 005949 516 SKTKAMVEELLKEYDNV-C--TLRVRMPISSDLNNPR-----NFITKISRYNKVVNI----PNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~-~--~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~----~~~~~~v~D~a~~~~~~~~ 583 (668)
|.||+++|++++++++. . +.+++.+|+|||.|-+ -|.+++.+|++.... ..-|..++|.++.++.+..
T Consensus 387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a 466 (588)
T COG1086 387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGA 466 (588)
T ss_pred hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHh
Confidence 99999999999998653 3 3899999999999987 478888888775543 2367789999999999988
Q ss_pred cc-CCceeeecCCCccCHHHHHHHHHhhcC
Q 005949 584 RN-LRGIWNFTNPGVVSHNEILEMYKKYIN 612 (668)
Q Consensus 584 ~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 612 (668)
.. .+++|-+--|+++++.|+++.+.+..|
T Consensus 467 ~~~gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 467 IAKGGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred hcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 66 556899999999999999999999998
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-24 Score=237.38 Aligned_cols=260 Identities=13% Similarity=0.157 Sum_probs=182.6
Q ss_pred cEEEEEcCCcchhHHHHHHHH--HcCCccc------------------------ccccccCCh------hHHHHHhhhcC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCE--KEGIPFE------------------------YGKGRLEDC------SSLIADVQSVK 431 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~--~~g~~v~------------------------~~~~D~~d~------~~~~~~l~~~~ 431 (668)
|||||||||||||++|+++|+ +.|++|. ++.+|++|+ +.+.++ + +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G--D 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c--C
Confidence 689999999999999999999 5777542 335677763 234333 3 5
Q ss_pred CCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC--C
Q 005949 432 PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT--P 508 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~--~ 508 (668)
+|+||||||.. +. ...+....++|+.++.+++++|++.++ +++++||..+|+..... +.|++. +
T Consensus 78 ~D~Vih~Aa~~---~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~-------~~e~~~~~~ 144 (657)
T PRK07201 78 IDHVVHLAAIY---DL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGV-------FREDDFDEG 144 (657)
T ss_pred CCEEEECceee---cC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCc-------cccccchhh
Confidence 69999999966 22 123456678999999999999999977 78888998998754321 233321 2
Q ss_pred CCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---------------HHHHhhcccceee------cCCC
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------------FITKISRYNKVVN------IPNS 567 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------------~~~~~~~~~~~~~------~~~~ 567 (668)
..+.+.|+.||.++|+++++. .+++++++|++++|||.. ++..+........ ...+
T Consensus 145 ~~~~~~Y~~sK~~~E~~~~~~---~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (657)
T PRK07201 145 QGLPTPYHRTKFEAEKLVREE---CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN 221 (657)
T ss_pred cCCCCchHHHHHHHHHHHHHc---CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee
Confidence 234478999999999999753 479999999999999741 1222211111111 1237
Q ss_pred cccHhhHHHHHHHHHhcc--CCceeeecCCCccCHHHHHHHHHhhcCCCC---CCCCCCHHHhhhhhc------------
Q 005949 568 MTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHNEILEMYKKYINPEF---KWVNFTLEEQAKVIV------------ 630 (668)
Q Consensus 568 ~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~---~~~~~~~~~~~~~~~------------ 630 (668)
++|+||+++++..+++.+ .+++||+++++++|+.|+++.+++.+|.+. ....+|.........
T Consensus 222 ~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 301 (657)
T PRK07201 222 IVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAV 301 (657)
T ss_pred eeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHH
Confidence 899999999999998754 467999999999999999999999999876 444444321100000
Q ss_pred ---c---------CCCCCccChhHHHhhc---C-CccChHHHHHHHHh
Q 005949 631 ---A---------PRSNNEMDASKLKKEF---P-ELLSIKDSLIKYVF 662 (668)
Q Consensus 631 ---~---------~~~~~~ld~~k~~~~~---g-~~~~~~~~l~~~~~ 662 (668)
. ......+|++|+++.+ + ..+++.+.+.+++.
T Consensus 302 ~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~ 349 (657)
T PRK07201 302 ATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVPRLASYAPRLWD 349 (657)
T ss_pred HHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCCChHHHHHHHHH
Confidence 0 0013467999999887 3 56778888777664
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-24 Score=210.34 Aligned_cols=219 Identities=26% Similarity=0.322 Sum_probs=132.4
Q ss_pred EEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-Ccccc----CC-----C---cCCCCeEEEEccCCCHH------H
Q 005949 11 ITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNL----IP-----S---KASSNFKFVKGDIASAD------L 71 (668)
Q Consensus 11 VtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~----~~-----~---~~~~~~~~~~~Dl~d~~------~ 71 (668)
|||||||||++|+++|++.++..+|+++.|..... ..+++ .. . ....+++++.||++++. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 79999999999999999997655999999975431 11111 11 1 12578999999999853 3
Q ss_pred HHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCc------CC
Q 005949 72 VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA------VV 145 (668)
Q Consensus 72 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~ 145 (668)
+.++. .++|+|||+||..+... +..++.++||.||++|++.|.... .++|+|+||+.+.+...... ..
T Consensus 81 ~~~L~--~~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~ 154 (249)
T PF07993_consen 81 YQELA--EEVDVIIHCAASVNFNA---PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEE 154 (249)
T ss_dssp HHHHH--HH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred hhccc--cccceeeecchhhhhcc---cchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccc
Confidence 45554 57999999999877543 444688999999999999999755 56999999965655544322 11
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHH-HcCCCceeecCCC
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFILLA-MRGLPLPIHGDGS 220 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~ 220 (668)
+..........+.|..||+.+|++++.+.++.|++++|+|||.|+|.... ....+..++... ..+......+++.
T Consensus 155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 234 (249)
T PF07993_consen 155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPD 234 (249)
T ss_dssp --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---
T ss_pred cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCC
Confidence 11222333445689999999999999998877999999999999994321 223244444444 4444333455666
Q ss_pred ceEeceeHHHHHHHH
Q 005949 221 NVRSYLYCEDVAEAF 235 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai 235 (668)
...++++||.+|++|
T Consensus 235 ~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 235 ARLDLVPVDYVARAI 249 (249)
T ss_dssp TT--EEEHHHHHHHH
T ss_pred ceEeEECHHHHHhhC
Confidence 679999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=216.89 Aligned_cols=211 Identities=15% Similarity=0.152 Sum_probs=167.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc--CCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV--KPT 433 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~--~~d 433 (668)
.+|+|+|||||||||++++++|+++|++| +++.+|++|++++.+++++. ++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 35799999999999999999999999854 23557899999999999865 579
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
+||||++.. . ......+++|+.++.+++++|++.++ ++|++||.++|. |.
T Consensus 139 ~Vi~~aa~~---~-----~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~---------------------p~ 189 (390)
T PLN02657 139 VVVSCLASR---T-----GGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK---------------------PL 189 (390)
T ss_pred EEEECCccC---C-----CCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC---------------------cc
Confidence 999998843 1 12345678899999999999999998 577778876541 22
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh-hHHHHhhcccceeecC------CCcccHhhHHHHHHHHHhcc
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~~~~------~~~~~v~D~a~~~~~~~~~~ 585 (668)
..|..+|..+|+.+.. ...+++++++|++++||+. .++..+..+++...++ .+++|++|+|+++..++.++
T Consensus 190 ~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~ 267 (390)
T PLN02657 190 LEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE 267 (390)
T ss_pred hHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc
Confidence 4688999999999876 3368999999999999864 3445555555433322 24799999999999998654
Q ss_pred --CCceeeecCC-CccCHHHHHHHHHhhcCCCCCCCCCCHH
Q 005949 586 --LRGIWNFTNP-GVVSHNEILEMYKKYINPEFKWVNFTLE 623 (668)
Q Consensus 586 --~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 623 (668)
.+++||++++ +.+|++|+++.+.+.+|.+..+..+|..
T Consensus 268 ~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~ 308 (390)
T PLN02657 268 SKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQ 308 (390)
T ss_pred cccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHH
Confidence 5689999986 6999999999999999998777766654
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=192.38 Aligned_cols=235 Identities=14% Similarity=0.130 Sum_probs=170.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 80 (668)
.|+||||||+|+||++++++|+++ +++|+++.|... ....+... ...++.++.+|++|.+++.+++.+ .+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPD--ALDDLKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999 678888887532 11111111 124688999999999988877642 46
Q ss_pred CCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
+|+|||+||....... .++....+++|+.++.++++++ ++.+ .++||++||......
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-------------- 141 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIA-------------- 141 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccC--------------
Confidence 8999999997653322 2334568889999999999987 4434 689999999654321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCce---eCCCCCCC--------ChHHHHHHHHHcCCCceeecC
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNV---YGPNQFPE--------KLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v---~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 218 (668)
..+.+.|+.+|...|.+++.++.+ ++++++++|||.+ ||++.... .....+.+.... +.+.+
T Consensus 142 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--- 217 (276)
T PRK06482 142 YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAI--- 217 (276)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCC---
Confidence 113567999999999999988765 5899999999988 66543211 111122222222 22221
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS 270 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g 270 (668)
+.+++|++++++.+++.+..+..||++++...++.|+++.+.+.++
T Consensus 218 ------~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 218 ------PGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred ------CCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 3578999999999998776677899999998999998888877764
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-21 Score=184.94 Aligned_cols=250 Identities=21% Similarity=0.211 Sum_probs=170.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC----Ccc------ccCCCcCCCCeEEEEccCCC------HH
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS----NLK------NLIPSKASSNFKFVKGDIAS------AD 70 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~----~~~------~~~~~~~~~~~~~~~~Dl~d------~~ 70 (668)
++||+||||||+|++|+++|+.+- ..+|+++.|..+.+ .+. ....+....+++.+.+|+.. ..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 479999999999999999999975 37999999876521 111 11223456789999999984 44
Q ss_pred HHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCC-CCCC
Q 005949 71 LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVV-GNHE 149 (668)
Q Consensus 71 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~-~~~e 149 (668)
.+.++. ..+|.|||+|+..+. ..+..+...+||.||..+++.|.. +.+|.|.|+||++|+......... ..++
T Consensus 80 ~~~~La--~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~-gk~Kp~~yVSsisv~~~~~~~~~~~~~~~ 153 (382)
T COG3320 80 TWQELA--ENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAAT-GKPKPLHYVSSISVGETEYYSNFTVDFDE 153 (382)
T ss_pred HHHHHh--hhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhc-CCCceeEEEeeeeeccccccCCCcccccc
Confidence 566665 679999999998763 234457778999999999999998 448899999999998765432211 1111
Q ss_pred C-----CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCCceeecCCC
Q 005949 150 A-----SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF----PEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 150 ~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
. ....+.+.|+.||+.+|.+++...++ |+|++|+|||+|-|+... ...++.+|++.+.+-+..+- ..
T Consensus 154 ~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~---~~ 229 (382)
T COG3320 154 ISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPD---SE 229 (382)
T ss_pred ccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCC---cc
Confidence 1 22335678999999999999998777 999999999999998762 23566677776665443331 11
Q ss_pred ceEecee-----------HHHHHHHHHHHHhcCC-CCceEE-EcCCCcccHHHHHHHHHH
Q 005949 221 NVRSYLY-----------CEDVAEAFECILHKGE-VGHVYN-VGTKKERRVIDVAKDICK 267 (668)
Q Consensus 221 ~~~~~i~-----------v~D~a~ai~~~~~~~~-~~~~~n-i~~~~~~s~~el~~~i~~ 267 (668)
...+.+. +.-+++++..+...+. ....|. ..-|..+...++.+.+.+
T Consensus 230 ~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 230 YSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 2222222 2333334444442221 112333 233677888888877766
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=172.36 Aligned_cols=299 Identities=16% Similarity=0.137 Sum_probs=222.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
.-+||||||-|++|..++..|..+...-.|++.|-...+... ...-.++..|+.|...+++++-..++|.+|
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V--------~~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV--------TDVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh--------cccCCchhhhhhccccHHHhhcccccceee
Confidence 359999999999999999988887645566666654322221 123357889999999999998778999999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+.+..+. ..+.+.....++|+.|..|+++.++++. -++..-|+++.||+.....+. ..-+...|...||.||..
T Consensus 116 HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSPRNPT--PdltIQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 116 HFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSPRNPT--PDLTIQRPRTIYGVSKVH 190 (366)
T ss_pred eHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCCCCCC--CCeeeecCceeechhHHH
Confidence 99987553 2355666788999999999999999976 466678999999987754331 233556688999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeC---CCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYG---PNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
+|.+-..+..++|+++..+|++.++. |++............+++.++...+-.+..+.++++..|+.++++..+..+
T Consensus 191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~ 270 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAAD 270 (366)
T ss_pred HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCC
Confidence 99999999999999999999988876 344334444444455554444444445667889999999999998888765
Q ss_pred C---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC---CCCCcccccChHHHH-hCCCcccCCHHHHHHHH
Q 005949 243 E---VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR---PFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKT 315 (668)
Q Consensus 243 ~---~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~ 315 (668)
. ...+||+. +-++|..|++..+.+.++. ..+.+.+.. -...+...+|.+.++ +..|+-+..+-..+.-+
T Consensus 271 ~~~lkrr~ynvt-~~sftpee~~~~~~~~~p~---~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~ 346 (366)
T KOG2774|consen 271 SQSLKRRTYNVT-GFSFTPEEIADAIRRVMPG---FEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTV 346 (366)
T ss_pred HHHhhhheeeec-eeccCHHHHHHHHHhhCCC---ceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHH
Confidence 3 45789999 6789999999999998742 223332221 123355678888886 69999888777777766
Q ss_pred HHHHhh
Q 005949 316 IEWYTQ 321 (668)
Q Consensus 316 ~~~~~~ 321 (668)
+.-.+.
T Consensus 347 i~~~~~ 352 (366)
T KOG2774|consen 347 VAVHKS 352 (366)
T ss_pred HHHHHh
Confidence 654444
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=204.63 Aligned_cols=218 Identities=17% Similarity=0.213 Sum_probs=158.4
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCC--cc-----------------------------------cccccccCCh------h
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGI--PF-----------------------------------EYGKGRLEDC------S 421 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~--~v-----------------------------------~~~~~D~~d~------~ 421 (668)
+|+|||||||||++|++.|+++|+ +| .++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 489999999999999999999984 23 2233555432 3
Q ss_pred HHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCC
Q 005949 422 SLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGI 500 (668)
Q Consensus 422 ~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~ 500 (668)
.+..+.. ++|+|||+|+.. +. ........+.|+.++.+++++|.+.+++ ++++||..+|+.....+
T Consensus 81 ~~~~~~~--~~d~vih~a~~~---~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~----- 147 (367)
T TIGR01746 81 EWERLAE--NVDTIVHNGALV---NW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLST----- 147 (367)
T ss_pred HHHHHHh--hCCEEEeCCcEe---cc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCC-----
Confidence 3444444 459999999966 21 1234456679999999999999999885 88889999987543221
Q ss_pred CCCCCCC----CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hHHHHhhc----ccceee-
Q 005949 501 GYKEEDT----PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISR----YNKVVN- 563 (668)
Q Consensus 501 ~~~ee~~----~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~----~~~~~~- 563 (668)
..+++. ...+.+.|+.||+.+|++++.+.+. +++++++|++.++|+. +++..++. .+....
T Consensus 148 -~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~ 225 (367)
T TIGR01746 148 -VTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDS 225 (367)
T ss_pred -ccccccccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCC
Confidence 111111 1123468999999999999887553 8999999999999962 23333222 221111
Q ss_pred --cCCCcccHhhHHHHHHHHHhccC----CceeeecCCCccCHHHHHHHHHhhcCCCCCCC
Q 005949 564 --IPNSMTVLDELLPISIEMAKRNL----RGIWNFTNPGVVSHNEILEMYKKYINPEFKWV 618 (668)
Q Consensus 564 --~~~~~~~v~D~a~~~~~~~~~~~----~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 618 (668)
...++++++|++++++.++.+.. +++||+++++++++.|+++.+.+ +|.+++.+
T Consensus 226 ~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~ 285 (367)
T TIGR01746 226 PELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLV 285 (367)
T ss_pred CccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcC
Confidence 13469999999999999987653 67999999999999999999999 88876643
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-22 Score=175.28 Aligned_cols=269 Identities=22% Similarity=0.248 Sum_probs=213.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc------------------------------cccccccCChhHHHHHhhhcCCCE
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF------------------------------EYGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v------------------------------~~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
..||||-||.-|++|+++|+.+||+| .+.-+|++|...+-+++...+|+-
T Consensus 30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtE 109 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTE 109 (376)
T ss_pred EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchh
Confidence 47999999999999999999999965 234489999999999999999999
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC----CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG----ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~----~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+|+|+++ ++..+.+-|+-+-++...||.+||++.+.++ +++...|||..||.....| -.|.+|..
T Consensus 110 iYnLaAQS---HVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~P-------QsE~TPFy 179 (376)
T KOG1372|consen 110 VYNLAAQS---HVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIP-------QSETTPFY 179 (376)
T ss_pred hhhhhhhc---ceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCC-------cccCCCCC
Confidence 99999999 7888888888888899999999999999875 4777889999999877776 78889999
Q ss_pred CCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---hHHHHhh-c--------ccceeecCC-----CcccHhh
Q 005949 511 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NFITKIS-R--------YNKVVNIPN-----SMTVLDE 573 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~~~~~~-~--------~~~~~~~~~-----~~~~v~D 573 (668)
|.++|+.+|..+-+++.+|.+.+++-.+--..+|--.|+ +|+.+-+ + ...-+..++ +|-|..|
T Consensus 180 PRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~d 259 (376)
T KOG1372|consen 180 PRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGD 259 (376)
T ss_pred CCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHH
Confidence 999999999999999999988899888877788888886 5655422 1 111222232 8889999
Q ss_pred HHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHh---h------hhh-ccCCC----CCccC
Q 005949 574 LLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQ---A------KVI-VAPRS----NNEMD 639 (668)
Q Consensus 574 ~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~------~~~-~~~~~----~~~ld 639 (668)
-+++++.+++++.+.-|-|+.++..|++||++..-..+|..+.|..-...+- . ... ...|| ...-|
T Consensus 260 YVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGd 339 (376)
T KOG1372|consen 260 YVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGD 339 (376)
T ss_pred HHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCC
Confidence 9999999999999999999999999999999998777786655542111100 0 000 01111 22348
Q ss_pred hhHHHhhcC--CccChHHHHHHHHhc
Q 005949 640 ASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 640 ~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+|+++.+| +...+.+-+++++.+
T Consensus 340 asKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 340 ASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred hHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 999999988 456777777777653
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-21 Score=231.12 Aligned_cols=256 Identities=20% Similarity=0.211 Sum_probs=182.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhC--CCCEEEEEcCCCccCC-ccccC---------CCcCCCCeEEEEccCCC-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNY--PEYKIVVLDKLDYCSN-LKNLI---------PSKASSNFKFVKGDIAS----- 68 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g--~~~~v~~~~r~~~~~~-~~~~~---------~~~~~~~~~~~~~Dl~d----- 68 (668)
.++|||||||||||+++++.|++++ ..++|+++.|...... ...+. ......+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5799999999999999999999885 4689999888643211 11110 11112368999999974
Q ss_pred -HHHHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCc----
Q 005949 69 -ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA---- 143 (668)
Q Consensus 69 -~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~---- 143 (668)
.+.+.++. .++|+|||+|+..+.. .....+...|+.|+.+++++|++.+ +++|+|+||.++|+......
T Consensus 1051 ~~~~~~~l~--~~~d~iiH~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443 1051 SDEKWSDLT--NEVDVIIHNGALVHWV---YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred CHHHHHHHH--hcCCEEEECCcEecCc---cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhh
Confidence 45555555 6799999999986532 2333455689999999999999865 88999999999997532110
Q ss_pred -----CCCCCCC-----CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHc
Q 005949 144 -----VVGNHEA-----SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMR 209 (668)
Q Consensus 144 -----~~~~~e~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~ 209 (668)
.....|. ....+.+.|+.+|+.+|.++..+.+. +++++++||++|||+..... .++..+++....
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~ 1203 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ 1203 (1389)
T ss_pred hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH
Confidence 0001121 12224567999999999999987654 89999999999999965332 234444433322
Q ss_pred CCCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCC
Q 005949 210 GLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFSMD 272 (668)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~el~~~i~~~~g~~ 272 (668)
-+ ..+++...++|++|+|++++++.++..+. .+.+||++++..+++.++++.+.+. |.+
T Consensus 1204 ~~---~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~ 1265 (1389)
T TIGR03443 1204 LG---LIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYD 1265 (1389)
T ss_pred hC---CcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 22 23345567899999999999999887653 3458999998899999999999754 543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.5e-21 Score=173.51 Aligned_cols=235 Identities=19% Similarity=0.277 Sum_probs=187.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+.++..+-|.|||||+|+.++.+|.+. +-+|++--|.+..... .+..-.....+-+...|+.|++++++++ ...+
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r-~lkvmGdLGQvl~~~fd~~DedSIr~vv--k~sN 132 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPR-HLKVMGDLGQVLFMKFDLRDEDSIRAVV--KHSN 132 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCccchh-heeecccccceeeeccCCCCHHHHHHHH--HhCc
Confidence 345567789999999999999999999 6778877775443221 2222223345788999999999999999 6789
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|||+.|..- +..-..+.++|+.++..|++.|++.| +.|||++|+...- ....+-|-.+
T Consensus 133 VVINLIGrd~----eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lgan----------------v~s~Sr~Lrs 191 (391)
T KOG2865|consen 133 VVINLIGRDY----ETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGAN----------------VKSPSRMLRS 191 (391)
T ss_pred EEEEeecccc----ccCCcccccccchHHHHHHHHHHhhC-hhheeehhhcccc----------------ccChHHHHHh
Confidence 9999998632 23334677899999999999999988 9999999986521 2224559999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc-eEeceeHHHHHHHHHHHHhc
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN-VRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~ai~~~~~~ 241 (668)
|..+|..+++.. -..+|+||+.+||..+ +++..+.....+-+.+++++.|.. ....++|-|+|++|+.++..
T Consensus 192 K~~gE~aVrdaf----PeAtIirPa~iyG~eD---rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkD 264 (391)
T KOG2865|consen 192 KAAGEEAVRDAF----PEATIIRPADIYGTED---RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKD 264 (391)
T ss_pred hhhhHHHHHhhC----Ccceeechhhhcccch---hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccC
Confidence 999999998764 4479999999999877 788887777777788888887754 45689999999999999988
Q ss_pred CC-CCceEEEcCCCcccHHHHHHHHHHHhC
Q 005949 242 GE-VGHVYNVGTKKERRVIDVAKDICKLFS 270 (668)
Q Consensus 242 ~~-~~~~~ni~~~~~~s~~el~~~i~~~~g 270 (668)
+. .|.+|.+++++.+...||++.+-+...
T Consensus 265 p~s~Gktye~vGP~~yql~eLvd~my~~~~ 294 (391)
T KOG2865|consen 265 PDSMGKTYEFVGPDRYQLSELVDIMYDMAR 294 (391)
T ss_pred ccccCceeeecCCchhhHHHHHHHHHHHHh
Confidence 76 688999999999999999998877654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=186.25 Aligned_cols=233 Identities=18% Similarity=0.108 Sum_probs=159.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|+.+++++||||||+|+||+++++.|+++ +++|++++|.... ...... .....++.++.+|++|.+.+.+++..
T Consensus 2 ~~~~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (262)
T PRK13394 2 MSNLNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDG--ANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDK 77 (262)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHH--HHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHH
Confidence 44466789999999999999999999998 6688888875421 111111 01123578899999999998877643
Q ss_pred -----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHH----HHHHHHHH-HHcCCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYG----THVLLEAC-KVTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|+|||+||...... ..+.....+.+|+.+ +.++++++ ++.+ .+++|++||...+...
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~----- 151 (262)
T PRK13394 78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS----- 151 (262)
T ss_pred HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC-----
Confidence 35899999999754322 223345677899999 66777777 5543 7899999996543221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC---CCceeecC
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG---LPLPIHGD 218 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 218 (668)
.+...|+.+|...+.+++.++++ .+++++++||+.+++|... ..++......... ....++..
T Consensus 152 ---------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 220 (262)
T PRK13394 152 ---------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD--KQIPEQAKELGISEEEVVKKVMLG 220 (262)
T ss_pred ---------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh--hhhHhhhhccCCChHHHHHHHHhc
Confidence 12457999999999999888765 4899999999999998532 1111111000000 00011223
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+...+.|++++|++++++.+++... .++.|+++++.
T Consensus 221 ~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 221 KTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 3455689999999999999987543 36788888764
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-20 Score=183.09 Aligned_cols=226 Identities=20% Similarity=0.161 Sum_probs=161.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..|++|+||||||||+||++++++|+++ +++|+++.+.... ....+.. .....+++++.+|+.|.+.+.+++..
T Consensus 1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 77 (249)
T PRK12825 1 MGSLMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEE-AAEELVEAVEALGRRAQAVQADVTDKAALEAAVAA 77 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHH-HHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHH
Confidence 77778889999999999999999999999 5677766654321 1111110 01134688999999999998887643
Q ss_pred -----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||...... ..+++...+++|+.++.++++.+ ++.+ .++||++||...+.+..
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~----- 151 (249)
T PRK12825 78 AVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWP----- 151 (249)
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCC-----
Confidence 36899999999654322 23345678899999999999887 3444 78999999987764422
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+++.++++ .+++++++||+.++|+...... ....... .... ..
T Consensus 152 ---------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~---~~~~-------~~ 211 (249)
T PRK12825 152 ---------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI-EEAREAK---DAET-------PL 211 (249)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc-chhHHhh---hccC-------CC
Confidence 2456999999999999887664 5899999999999998753221 1111111 0011 11
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
..+++.+|+++++..+++... .++.|+++++..
T Consensus 212 ~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~ 247 (249)
T PRK12825 212 GRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVD 247 (249)
T ss_pred CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEe
Confidence 238899999999999986642 478999998754
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4e-20 Score=181.70 Aligned_cols=230 Identities=18% Similarity=0.169 Sum_probs=158.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC---CCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI---PSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++++||||||+|+||++++++|+++ +++|++++|.... ....+. .......+.++.+|++|.+.+..++.
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 77 (249)
T PRK09135 1 MMTDSAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAA-EADALAAELNALRPGSAAALQADLLDPDALPELVA 77 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH-HHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence 55566789999999999999999999998 7889998875321 111110 01112357889999999999888775
Q ss_pred c-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
. .++|+|||+||..... ...+++...++.|+.++.++++++... .....++.+||..
T Consensus 78 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~------------ 145 (249)
T PRK09135 78 ACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH------------ 145 (249)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh------------
Confidence 3 3689999999964321 122345678899999999999988642 1124566665522
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+..+..+...|+.+|..+|.+++.+++++ +++++++||+.++||.... .+...+......+.+.. .
T Consensus 146 --~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~ 213 (249)
T PRK09135 146 --AERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN-SFDEEARQAILARTPLK---------R 213 (249)
T ss_pred --hcCCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc-cCCHHHHHHHHhcCCcC---------C
Confidence 12234566789999999999999988764 6999999999999997632 22222222333322211 1
Q ss_pred ceeHHHHHHHHHHHHhcC--CCCceEEEcCCCccc
Q 005949 225 YLYCEDVAEAFECILHKG--EVGHVYNVGTKKERR 257 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~~~s 257 (668)
+.+++|+++++..++... ..+++||++++..++
T Consensus 214 ~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 214 IGTPEDIAEAVRFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred CcCHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence 235899999996655432 257899999887654
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=202.77 Aligned_cols=181 Identities=15% Similarity=0.179 Sum_probs=136.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCCcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVD 448 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~ 448 (668)
|||+||||+||||++|++.|+++||+| +++.+|++++. +.+++.+ +|+|||+|+.. ..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al~~--~D~VIHLAa~~---~~- 73 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELAGE--ADAVIHLAPVD---TS- 73 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHhcC--CCEEEEcCccC---cc-
Confidence 689999999999999999999999865 34567888764 6666665 59999999854 11
Q ss_pred ccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHh
Q 005949 449 WCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528 (668)
Q Consensus 449 ~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~ 528 (668)
. ...+|+.|+.|++++|++.++++|++||. +|. + ..|. .+|.++..
T Consensus 74 ----~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~----~-----------------~~~~----~aE~ll~~ 119 (699)
T PRK12320 74 ----A---PGGVGITGLAHVANAAARAGARLLFVSQA--AGR----P-----------------ELYR----QAETLVST 119 (699)
T ss_pred ----c---hhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCC----C-----------------cccc----HHHHHHHh
Confidence 1 12589999999999999999988888875 221 1 0122 47887765
Q ss_pred ccCeeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccCCceeeecCCCccCHHH
Q 005949 529 YDNVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 529 ~~~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e 602 (668)
++++++++|++++|||+ +++..+++.. ....+..++|++|++++++.++++...|+|||++++.+|+.|
T Consensus 120 ----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~-~~~~pI~vIyVdDvv~alv~al~~~~~GiyNIG~~~~~Si~e 194 (699)
T PRK12320 120 ----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSK-VSARPIRVLHLDDLVRFLVLALNTDRNGVVDLATPDTTNVVT 194 (699)
T ss_pred ----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHH-HcCCceEEEEHHHHHHHHHHHHhCCCCCEEEEeCCCeeEHHH
Confidence 34789999999999995 2344433221 111122357999999999999987767899999999999999
Q ss_pred HHHHHHhh
Q 005949 603 ILEMYKKY 610 (668)
Q Consensus 603 ~~~~i~~~ 610 (668)
+++.+...
T Consensus 195 l~~~i~~~ 202 (699)
T PRK12320 195 AWRLLRSV 202 (699)
T ss_pred HHHHHHHh
Confidence 99998776
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=182.15 Aligned_cols=211 Identities=17% Similarity=0.133 Sum_probs=153.7
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----CC-CC
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----ES-ID 82 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~-~d 82 (668)
+||||||||++|++++++|+++ +++|+++.|..... ...+++.+.+|+.|++.+.+++.. .+ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~---------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSS---------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccc---------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 5999999999999999999998 57788888864321 123567788999999999998832 35 89
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
.|+|+++... + ......+++++|++.| +++||++||..++... ..
T Consensus 70 ~v~~~~~~~~------~-------~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~---------------------~~ 114 (285)
T TIGR03649 70 AVYLVAPPIP------D-------LAPPMIKFIDFARSKG-VRRFVLLSASIIEKGG---------------------PA 114 (285)
T ss_pred EEEEeCCCCC------C-------hhHHHHHHHHHHHHcC-CCEEEEeeccccCCCC---------------------ch
Confidence 9999986422 1 1234578999999987 9999999986553210 01
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
+...|.+++.. .+++++++||+.+++.... . .+...+.....+. .+.+...++|++++|+++++..++..+
T Consensus 115 ~~~~~~~l~~~---~gi~~tilRp~~f~~~~~~--~---~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~ 185 (285)
T TIGR03649 115 MGQVHAHLDSL---GGVEYTVLRPTWFMENFSE--E---FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDK 185 (285)
T ss_pred HHHHHHHHHhc---cCCCEEEEeccHHhhhhcc--c---ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCC
Confidence 22344444321 3899999999998864311 1 1112222333333 355778899999999999999998875
Q ss_pred C-CCceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005949 243 E-VGHVYNVGTKKERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 243 ~-~~~~~ni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
. .++.|++.+++.+|+.|+++.+.+.+|++.
T Consensus 186 ~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v 217 (285)
T TIGR03649 186 VAPNTDYVVLGPELLTYDDVAEILSRVLGRKI 217 (285)
T ss_pred CcCCCeEEeeCCccCCHHHHHHHHHHHhCCce
Confidence 4 467899999999999999999999999864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=178.11 Aligned_cols=226 Identities=17% Similarity=0.112 Sum_probs=161.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++|+||||||+|+||.+++++|+++ +++|++++|..... ....+. ....++.++.+|+.|.+.+.+++..
T Consensus 1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12826 1 TRDLEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVE--AAGGKARARQVDVRDRAALKAAVAA 76 (251)
T ss_pred CCCCCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHH
Confidence 56677889999999999999999999999 67898888863211 011111 1123588999999999998887743
Q ss_pred -----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+++.... ....+++...++.|+.++.++++++. +.+ .++||++||...++..
T Consensus 77 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~------ 149 (251)
T PRK12826 77 GVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG------ 149 (251)
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccC------
Confidence 269999999987653 22334556789999999999998874 333 6799999998765111
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
..+...|+.+|..++.+++.++.+ .+++++++||+.++||....... ..+........++
T Consensus 150 -------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~--------- 212 (251)
T PRK12826 150 -------YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPL--------- 212 (251)
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCC---------
Confidence 122457999999999999887654 48999999999999996532111 1111122222111
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+++++|+++++..++.... .+++|++.+|.
T Consensus 213 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 213 GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 147899999999998886542 57899998765
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=176.44 Aligned_cols=230 Identities=19% Similarity=0.207 Sum_probs=155.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCC-HHHHHHHhccCCCCE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS-ADLVNFLLITESIDT 83 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~ 83 (668)
.+|+||||||||+||+++++.|+++ +++|+++.|.... ...... ...+++++.+|+.| .+.+.+.+. .++|+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~--~~~~~~--~~~~~~~~~~Dl~d~~~~l~~~~~-~~~d~ 88 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDK--AKTSLP--QDPSLQIVRADVTEGSDKLVEAIG-DDSDA 88 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHH--HHHhcc--cCCceEEEEeeCCCCHHHHHHHhh-cCCCE
Confidence 4689999999999999999999998 6788887775421 111111 12368999999998 455655552 37999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+++.... .++...+..|..++.++++++++.+ +++||++||.++|+.....+.. ......++...|..+|
T Consensus 89 vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~--~~~~~~~~~~~~~~~k 161 (251)
T PLN00141 89 VICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILN--PAYIFLNLFGLTLVAK 161 (251)
T ss_pred EEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccC--cchhHHHHHHHHHHHH
Confidence 9999886421 1223345788899999999999876 8999999999999864322110 0000111222344567
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..+|++++. .+++++++||+.++++... + .+.+.........+++.+|+|+++..++..+.
T Consensus 162 ~~~e~~l~~----~gi~~~iirpg~~~~~~~~--------------~-~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~ 222 (251)
T PLN00141 162 LQAEKYIRK----SGINYTIVRPGGLTNDPPT--------------G-NIVMEPEDTLYEGSISRDQVAEVAVEALLCPE 222 (251)
T ss_pred HHHHHHHHh----cCCcEEEEECCCccCCCCC--------------c-eEEECCCCccccCcccHHHHHHHHHHHhcChh
Confidence 788876653 4899999999999986421 1 11111111122357999999999999988765
Q ss_pred -CCceEEEcCC---CcccHHHHHHHHHH
Q 005949 244 -VGHVYNVGTK---KERRVIDVAKDICK 267 (668)
Q Consensus 244 -~~~~~ni~~~---~~~s~~el~~~i~~ 267 (668)
.+.++.+.+. ...++.+|...+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 223 SSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred hcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 3567777752 24788888877654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=188.14 Aligned_cols=227 Identities=15% Similarity=0.071 Sum_probs=160.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..|++++||||||+|+||++++++|+++ +++|++++|... .+...... ....++.++.+|++|.+.+.+++..
T Consensus 1 m~~~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 76 (287)
T PRK06194 1 MKDFAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQD--ALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADA 76 (287)
T ss_pred CcCCCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 67777899999999999999999999999 678988888532 11111111 1123578899999999998887743
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCC-----CcEEEEEcCccccCCCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQ-----IRRFIHVSTDEVYGETD 140 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~-----~~~~v~~SS~~vyg~~~ 140 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++ .+.+. ..++|++||...+.+..
T Consensus 77 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~ 156 (287)
T PRK06194 77 ALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP 156 (287)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC
Confidence 2689999999986532 223344567889999999977663 33331 25899999987765432
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC-----CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCcee
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-----LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI 215 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 215 (668)
+...|+.+|.+.|.+++.++.+++ +++..+.|+.+..+. .....+++..+
T Consensus 157 --------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~-----------~~~~~~~~~~~ 211 (287)
T PRK06194 157 --------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI-----------WQSERNRPADL 211 (287)
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc-----------ccccccCchhc
Confidence 235699999999999999877654 444455554443321 11223445666
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM 271 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~ 271 (668)
.+++.+.++|++++|.+.++.... .++..|+++.+.+.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~~ 252 (287)
T PRK06194 212 ANTAPPTRSQLIAQAMSQKAVGSG---------------KVTAEEVAQLVFDAIRA 252 (287)
T ss_pred ccCccccchhhHHHHHHHhhhhcc---------------CCCHHHHHHHHHHHHHc
Confidence 677888999999999887753211 17999999999987753
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.4e-20 Score=169.60 Aligned_cols=183 Identities=24% Similarity=0.348 Sum_probs=141.2
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFA 88 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 88 (668)
|+|+||||++|+.+++.|+++ +++|+++.|.... ... ..+++++.+|+.|.+.+.+++ .++|+|||++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~--~~~------~~~~~~~~~d~~d~~~~~~al--~~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSK--AED------SPGVEIIQGDLFDPDSVKAAL--KGADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGG--HHH------CTTEEEEESCTTCHHHHHHHH--TTSSEEEECC
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchh--ccc------ccccccceeeehhhhhhhhhh--hhcchhhhhh
Confidence 799999999999999999999 5899999887531 111 568999999999999999999 6899999999
Q ss_pred ccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHH
Q 005949 89 AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 168 (668)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 168 (668)
+.... ....+.++++++++++ ++++|++||.++|+........ ........|...|..+|+
T Consensus 69 ~~~~~-------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~e~ 129 (183)
T PF13460_consen 69 GPPPK-------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSD-----EDKPIFPEYARDKREAEE 129 (183)
T ss_dssp HSTTT-------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEG-----GTCGGGHHHHHHHHHHHH
T ss_pred hhhcc-------------cccccccccccccccc-cccceeeeccccCCCCCccccc-----ccccchhhhHHHHHHHHH
Confidence 75432 1778899999999987 9999999999999865542110 001111468888988888
Q ss_pred HHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 169 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 169 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
.++ +.+++++++||+.+||+......++ ..++....++|+.+|+|++++.++++
T Consensus 130 ~~~----~~~~~~~ivrp~~~~~~~~~~~~~~---------------~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 130 ALR----ESGLNWTIVRPGWIYGNPSRSYRLI---------------KEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHH----HSTSEEEEEEESEEEBTTSSSEEEE---------------SSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HHH----hcCCCEEEEECcEeEeCCCcceeEE---------------eccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 774 3389999999999999864211111 11344556899999999999998864
|
... |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=178.67 Aligned_cols=239 Identities=14% Similarity=0.059 Sum_probs=169.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++++||||||+|+||++++++|+++ +++|++++|... .+..+.. .....+..+.+|+.|.+.+.+++..
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTA--TLADLAE-KYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH-hccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 34579999999999999999999998 678888888532 1111111 1123578889999999998777643
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++..+++.+ ++.+ .+++|++||...+.+..
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~---------- 144 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFP---------- 144 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCC----------
Confidence 3789999999976432 233456678999999998888775 4444 67999999977765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCCceeecCCC
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
....|+.+|...+.+.+.++.+ +|++++++|||.+..+..... .....+...... ..
T Consensus 145 ----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 211 (275)
T PRK08263 145 ----MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QW 211 (275)
T ss_pred ----CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HH
Confidence 1356999999999999887764 589999999999887644210 011111111100 01
Q ss_pred ceEec-eeHHHHHHHHHHHHhcCCCCceEEEcC-CCcccHHHHHHHHHHHhCC
Q 005949 221 NVRSY-LYCEDVAEAFECILHKGEVGHVYNVGT-KKERRVIDVAKDICKLFSM 271 (668)
Q Consensus 221 ~~~~~-i~v~D~a~ai~~~~~~~~~~~~~ni~~-~~~~s~~el~~~i~~~~g~ 271 (668)
....+ ++++|++++++.+++.+.....|.++. +..+++.++.+.+.+..++
T Consensus 212 ~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (275)
T PRK08263 212 SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEEW 264 (275)
T ss_pred HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHHH
Confidence 11234 789999999999999876555555554 4678999999999886544
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-19 Score=174.52 Aligned_cols=225 Identities=19% Similarity=0.180 Sum_probs=161.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..++++++|||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+++..++..
T Consensus 1 ~~~~~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (250)
T PRK07774 1 MGRFDDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEG--AERVAKQIVADGGTAIAVQVDVSDPDSAKAMADA 76 (250)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 56667889999999999999999999998 6789999886421 1111111 1123577889999999988776643
Q ss_pred -----CCCCEEEEcCccCCc-------ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCc
Q 005949 79 -----ESIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~ 143 (668)
.++|+|||+||.... ....++....+.+|+.++.++++++... ...++||++||...|..
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----- 151 (250)
T PRK07774 77 TVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY----- 151 (250)
T ss_pred HHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-----
Confidence 368999999997431 1223345567889999999999888753 12469999999877542
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
.+.|+.+|.+.|.+++.+++++ ++++++++||.+..+...... ...+.+...++.+..
T Consensus 152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~------ 212 (250)
T PRK07774 152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIPLS------ 212 (250)
T ss_pred ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CHHHHHHHHhcCCCC------
Confidence 3569999999999999987764 799999999999887653211 112333333333221
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+.+++|++++++.++... ..+++||++++..+
T Consensus 213 ---~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~ 248 (250)
T PRK07774 213 ---RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII 248 (250)
T ss_pred ---CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence 1457899999999888753 35789999987654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-19 Score=175.84 Aligned_cols=225 Identities=18% Similarity=0.164 Sum_probs=156.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++||||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|+.|.+++..++..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAG--AEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF 76 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999 6789999886421 1111111 1124688899999999977665532
Q ss_pred CCCCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+|+....... ..+....+..|+.++..+++.+ ++.+ +++||++||...+.+..
T Consensus 77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~---------- 145 (255)
T TIGR01963 77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASP---------- 145 (255)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCC----------
Confidence 468999999997653221 1223456788999988888776 4444 78999999976654332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCce-------eecCCC
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLP-------IHGDGS 220 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 220 (668)
....|+.+|...+.+++.++.+ .+++++++||+.+++|... ..+.. . ....... ....+.
T Consensus 146 ----~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~--~~~~~---~-~~~~~~~~~~~~~~~~~~~~ 215 (255)
T TIGR01963 146 ----FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE--KQIAD---Q-AKTRGIPEEQVIREVMLPGQ 215 (255)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH--HHHHh---h-hcccCCCchHHHHHHHHccC
Confidence 1356999999999999887654 3899999999999988531 11111 1 0111100 012234
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+++++++|+|++++.+++.. ..++.|+++++..
T Consensus 216 ~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 216 PTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT 253 (255)
T ss_pred ccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence 5668999999999999999753 2467899987653
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-19 Score=175.52 Aligned_cols=242 Identities=14% Similarity=0.109 Sum_probs=167.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
|++++||||||+|+||++++++|+++ +++|++++|...... ...+.......++.++.+|+.|++.+..+++.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678988887532110 01111011124678889999999988877643
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC---CCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG---QIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++.+.. ...+||++||...+....
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 154 (276)
T PRK05875 83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR-------- 154 (276)
T ss_pred HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC--------
Confidence 278999999996421 11223355678899999999998765421 135899999987654321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+.+.|+.+|...|.+++.++++. +++++++|||.+.++................... ....+
T Consensus 155 ------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~ 219 (276)
T PRK05875 155 ------WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT---------PLPRV 219 (276)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC---------CCCCC
Confidence 24679999999999999987654 6999999999998775421111111111111111 12236
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc----cHHHHHHHHHHHhC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKKER----RVIDVAKDICKLFS 270 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~----s~~el~~~i~~~~g 270 (668)
++++|+++++..+++.+. .+++|+++++..+ +..|+++.+....+
T Consensus 220 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 220 GEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred cCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 789999999999988654 3789999988765 77888777765544
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=193.56 Aligned_cols=217 Identities=13% Similarity=0.140 Sum_probs=152.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc------------------------------------------------cccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP------------------------------------------------FEYGKG 415 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~------------------------------------------------v~~~~~ 415 (668)
++|||||||||||.+|++.|++.+.+ +..+.+
T Consensus 120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G 199 (605)
T PLN02503 120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG 199 (605)
T ss_pred CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence 58999999999999999999986542 123567
Q ss_pred ccCCh------hHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-C-cEEEEeccee
Q 005949 416 RLEDC------SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCI 487 (668)
Q Consensus 416 D~~d~------~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~v 487 (668)
|++++ +..+.+.+ ++|+|||+|+.. .. ..++...+++|+.|+.+|+++|++.+ . +++|+||++|
T Consensus 200 Dl~d~~LGLs~~~~~~L~~--~vDiVIH~AA~v---~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV 271 (605)
T PLN02503 200 NVCESNLGLEPDLADEIAK--EVDVIINSAANT---TF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV 271 (605)
T ss_pred eCCCcccCCCHHHHHHHHh--cCCEEEECcccc---cc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence 88775 23343333 479999999966 21 24577888999999999999998874 4 5888999999
Q ss_pred EeecCCCCCCCCCCCC----------------------C------------C---C-----------------CCCCCCC
Q 005949 488 FEYDAAHPEGSGIGYK----------------------E------------E---D-----------------TPNFTGS 513 (668)
Q Consensus 488 y~~~~~~p~~~~~~~~----------------------e------------e---~-----------------~~~~~~~ 513 (668)
||.....-. +..|. + + + ...-| |
T Consensus 272 yG~~~G~i~--E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~p-N 348 (605)
T PLN02503 272 NGQRQGRIM--EKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQ-D 348 (605)
T ss_pred ecCCCCeee--eeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCC-C
Confidence 987642110 11111 0 0 0 01112 8
Q ss_pred cchhhHHHHHHHHHhccCeeEeEEeeeecCCC----------CChh--hHHHHhhcccce--e------ecCCCcccHhh
Q 005949 514 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDL----------NNPR--NFITKISRYNKV--V------NIPNSMTVLDE 573 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~----------~g~~--~~~~~~~~~~~~--~------~~~~~~~~v~D 573 (668)
.|..+|.++|++++++.. ++|++++||+.| |++. .+...++..+.. . ....+++++|.
T Consensus 349 tYt~TK~lAE~lV~~~~~--~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~ 426 (605)
T PLN02503 349 TYVFTKAMGEMVINSMRG--DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM 426 (605)
T ss_pred hHHHHHHHHHHHHHHhcC--CCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence 899999999999998654 799999999998 4443 111111111111 1 11228999999
Q ss_pred HHHHHHHHHhc------cCCceeeecCC--CccCHHHHHHHHHhhcCC
Q 005949 574 LLPISIEMAKR------NLRGIWNFTNP--GVVSHNEILEMYKKYINP 613 (668)
Q Consensus 574 ~a~~~~~~~~~------~~~g~~ni~~~--~~~s~~e~~~~i~~~~g~ 613 (668)
++.+++.++.. ....+||++++ .++++.++++.+.+.+..
T Consensus 427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 99999988431 13579999998 999999999999887553
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=177.88 Aligned_cols=234 Identities=19% Similarity=0.153 Sum_probs=162.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++++||||||+|+||.++++.|+++ +++|++++|.... ...+... ...++.++.+|++|.+.+.+++..
T Consensus 1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~--~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 1 MMRLQGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPAR--ARLAALE-IGPAAIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHH--HHHHHHH-hCCceEEEEccCCCHHHHHHHHHHHH
Confidence 44556789999999999999999999999 6889988885421 1111111 123578899999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccc-cCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEV-YGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v-yg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... +.-.++|++||... ++.
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 147 (257)
T PRK07067 76 ERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE-------- 147 (257)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC--------
Confidence 3689999999975422 123445678899999999999988642 11258999999543 222
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHH--cCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAM--RGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 221 (668)
.+...|+.+|...+.+++.++.+ +++++++++||.++++.... ....+..... .+.......++..
T Consensus 148 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
T PRK07067 148 -------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ--VDALFARYENRPPGEKKRLVGEAVP 218 (257)
T ss_pred -------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh--hhhhhhhccCCCHHHHHHHHhhcCC
Confidence 13567999999999999887764 58999999999999985321 1000100000 0000011223334
Q ss_pred eEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005949 222 VRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKER 256 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~ 256 (668)
.+.+.+.+|+|+++..++.... .+++|++.+|+.+
T Consensus 219 ~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 219 LGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred CCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence 5678999999999999887542 4789999987654
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-19 Score=174.18 Aligned_cols=228 Identities=18% Similarity=0.132 Sum_probs=154.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
|++++||||||+|+||++++++|+++ +++|++++|.... ....... ....+++.+.+|+.|.+.+.+++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 77 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEA--AAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE 77 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 6789888886432 1111111 1134688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHH----HHHHHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLL----EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+|+....... .++....++.|+.++.++. +.+++.+ .++||++||...+.+..
T Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~-------- 148 (258)
T PRK12429 78 TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSA-------- 148 (258)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC--------
Confidence 369999999997543221 2233456778999855555 4444444 78999999976543321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCc-----eeecCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPL-----PIHGDGS 220 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 220 (668)
+.+.|+.+|.+.+.+.+.++.+ .++++.++||+.+++|.... .+...... .+... .......
T Consensus 149 ------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~ 218 (258)
T PRK12429 149 ------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--QIPDLAKE--RGISEEEVLEDVLLPLV 218 (258)
T ss_pred ------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--hhhhhccc--cCCChHHHHHHHHhccC
Confidence 2467999999999999887654 37999999999999986421 11110000 00000 0112223
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+.|++++|+++++..++.... .++.|++.+|.
T Consensus 219 ~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 219 PQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred CccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence 34579999999999998887533 36788888663
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=172.26 Aligned_cols=223 Identities=17% Similarity=0.172 Sum_probs=154.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+.++++|||||+|+||++++++|+++ +++|++.+|.... ....... ....++.++.+|++|.+.+.+++..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEK--CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34579999999999999999999998 6788887775321 1111110 1123578889999999998877743
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||...... ..++....+.+|+.++.++++.+... ....+||++||...|.+..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (274)
T PRK07775 84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP--------- 154 (274)
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---------
Confidence 36899999999754322 12334456799999999998876421 1256899999987765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF--PEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|.+.|.+++.++.+. +++++++|||.+.++... ....+..+...... ++ +...+.
T Consensus 155 -----~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~ 222 (274)
T PRK07775 155 -----HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDY 222 (274)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-cccccc
Confidence 24569999999999999987654 899999999988655321 11111112111111 01 112356
Q ss_pred ceeHHHHHHHHHHHHhcCCCCceEEEc
Q 005949 225 YLYCEDVAEAFECILHKGEVGHVYNVG 251 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~~~~~~ni~ 251 (668)
+++++|++++++.+++.+..+.+||+.
T Consensus 223 ~~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 223 FLRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred ccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 899999999999999877656678876
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=170.96 Aligned_cols=233 Identities=16% Similarity=0.143 Sum_probs=164.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 80 (668)
++++|||||+|+||++++++|+++ +++|++++|.... ...+.......++..+.+|+.|.+.+..++.. .+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAA--LAAFADALGDARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999998 6788888885421 11111111224688999999999998877643 25
Q ss_pred CCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
+|+|||++|....... .+.....+.+|+.++.++++++. +.+ .+++|++||...+....
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------------ 144 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAALG------------ 144 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCCC------------
Confidence 8999999997542211 12223456799999999988773 223 57899999964432111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
...|+.+|.+.+.+++.+++++ +++++++|||.++++..... ...+.+....... ...++|+++
T Consensus 145 ---~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 212 (257)
T PRK07074 145 ---HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATP 212 (257)
T ss_pred ---CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCH
Confidence 2359999999999999987654 79999999999998854211 1111222222111 123478999
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHH
Q 005949 229 EDVAEAFECILHKG---EVGHVYNVGTKKERRVIDVAKDICK 267 (668)
Q Consensus 229 ~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~el~~~i~~ 267 (668)
+|++++++.++... ..+..+++.++...+..|+++.+..
T Consensus 213 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 213 DDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred HHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 99999999998643 2477889998888899999887753
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=171.35 Aligned_cols=228 Identities=11% Similarity=0.044 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++++||||||+|+||++++++|+++ +++|++++|... ....+.. ....++..+.+|+.|.+.+.++++.
T Consensus 2 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~l~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 2 SSMKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEA--ARADFEA-LHPDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHH--HHHHHHh-hcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999998 678999988542 1212111 1123678899999999998877643
Q ss_pred CCCCEEEEcCccCCccccc----CChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||........ ++....+++|+.++.++++++. +.+ .+++|++||...+....
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~---------- 145 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMP---------- 145 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCC----------
Confidence 2689999999975432222 2234668999999999998853 323 57999999976654321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-----CChHHHHHHHHHcCCCceeecCCCce
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...|.+++.++.+ ++++++++|||.+.++.... ...+..+.............. ..
T Consensus 146 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 218 (277)
T PRK06180 146 ----GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAK---SG 218 (277)
T ss_pred ----CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhh---cc
Confidence 3457999999999999887754 48999999999998764211 011111111110000000001 11
Q ss_pred EeceeHHHHHHHHHHHHhcCCCCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGEVGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~ 254 (668)
..+..++|++++++.+++.+.....|.++...
T Consensus 219 ~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~ 250 (277)
T PRK06180 219 KQPGDPAKAAQAILAAVESDEPPLHLLLGSDA 250 (277)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence 23567999999999999887665556655433
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=180.60 Aligned_cols=232 Identities=15% Similarity=0.158 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-c-cccCC-----Cc--CCCCeEEEEccCCCHHHHHH
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-L-KNLIP-----SK--ASSNFKFVKGDIASADLVNF 74 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~-~~~~~-----~~--~~~~~~~~~~Dl~d~~~~~~ 74 (668)
+++++||||||+|+||++++++|+++ +++|++++|...... + ..+.. .. ...+++++.+|+.|.+.+.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 45789999999999999999999999 678888877542210 0 00000 00 12358899999999999998
Q ss_pred HhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 75 LLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 75 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
++ .++|+|||++|.... ...++...+.+|+.|+.+++++++..+ +++||++||.+++..... . ....
T Consensus 156 aL--ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p-------~-~~~~ 222 (576)
T PLN03209 156 AL--GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFP-------A-AILN 222 (576)
T ss_pred Hh--cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCcc-------c-cchh
Confidence 88 689999999987532 112455678899999999999999876 899999999876311100 0 0122
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
....|...|..+|..+.. .|++++++|||.+.++.+.... . ..+.+..+......++...|+|++
T Consensus 223 sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~----------t-~~v~~~~~d~~~gr~isreDVA~v 287 (576)
T PLN03209 223 LFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----------T-HNLTLSEEDTLFGGQVSNLQVAEL 287 (576)
T ss_pred hHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCcccccc----------c-cceeeccccccCCCccCHHHHHHH
Confidence 334577888888888753 4899999999999987542100 0 111111111111235788999999
Q ss_pred HHHHHhcCC--CCceEEEcCCCc---ccHHHHHHHH
Q 005949 235 FECILHKGE--VGHVYNVGTKKE---RRVIDVAKDI 265 (668)
Q Consensus 235 i~~~~~~~~--~~~~~ni~~~~~---~s~~el~~~i 265 (668)
++.++.++. .+.+|.+.++.. ..+.+++..|
T Consensus 288 VvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 288 MACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred HHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 999888553 467888887653 3455554443
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=169.33 Aligned_cols=222 Identities=19% Similarity=0.159 Sum_probs=156.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+|++++||||||+|+||.++++.|+++ +++|++++|.... ...+.. .....++.++.+|+.|++.+..++..
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEA--AEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 456689999999999999999999998 6678888886421 111111 01234678889999999988777643
Q ss_pred ---CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||...... ..++....+..|+.++.++++++. +.+ +++||++||.....+
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~--------- 147 (246)
T PRK05653 78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTG--------- 147 (246)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccC---------
Confidence 36799999999754321 122345678899999999998884 334 689999999654321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
..+...|+.+|...|.+++.++++ .+++++++||+.++|+.... +...+........ ..+.
T Consensus 148 -----~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~~---------~~~~ 211 (246)
T PRK05653 148 -----NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG--LPEEVKAEILKEI---------PLGR 211 (246)
T ss_pred -----CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh--hhHHHHHHHHhcC---------CCCC
Confidence 123456999999999999887654 37999999999999986521 1111222111111 1245
Q ss_pred ceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+++.+|+++++..++.... .+..|++++|.
T Consensus 212 ~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 212 LGQPEEVANAVAFLASDAASYITGQVIPVNGGM 244 (246)
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence 7899999999999886532 46789988765
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=173.73 Aligned_cols=231 Identities=14% Similarity=0.117 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-Ccc-ccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLK-NLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
|+++++|||||+|+||+++++.|+++ +++|++++|..... ... .........+++++.+|+.|++.+.. +..
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~ 77 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK 77 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence 45678999999999999999999998 68888888754211 010 01111112468899999999998776 422
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||...... ..++....+.+|+.++.++++.+ ++.+ .++||++||...+.+.
T Consensus 78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~--------- 147 (280)
T PRK06914 78 EIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGF--------- 147 (280)
T ss_pred hcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCC---------
Confidence 36899999999755321 22344567889999999888875 4444 6799999996443221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHH---HhcCCCEEEEeeCceeCCCCCCC-----------ChHHHHHHHHHcCCCce
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYG---RSYGLPVITTRGNNVYGPNQFPE-----------KLIPKFILLAMRGLPLP 214 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~v~G~~~~~~-----------~~~~~~~~~~~~~~~~~ 214 (668)
.+...|+.+|...+.+++.++ ..++++++++|||.+.++..... ............. .
T Consensus 148 -----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 219 (280)
T PRK06914 148 -----PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I- 219 (280)
T ss_pred -----CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H-
Confidence 124579999999999998876 34589999999999988743110 0011111111100 0
Q ss_pred eecCCCceEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHH
Q 005949 215 IHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVI 259 (668)
Q Consensus 215 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~ 259 (668)
. .....+++++|++++++.+++++.....|+++.+..+++.
T Consensus 220 --~--~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 220 --N--SGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred --h--hhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 0 1123568899999999999998876667999877665554
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=171.84 Aligned_cols=243 Identities=14% Similarity=0.061 Sum_probs=160.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..|+++++|||||+|+||++++++|+++ +++|++.+|... .+...... ....++.++.+|++|.+++.+++..
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~--~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 76 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKP--GLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADE 76 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 66778899999999999999999999999 678888887532 11111111 1123578899999999998877643
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... .+.++....+++|+.++.++.+++. +.+...++|++||...+.+.
T Consensus 77 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~------ 150 (275)
T PRK05876 77 AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN------ 150 (275)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC------
Confidence 2689999999975422 2223345678999999999998874 23324689999998765432
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
.+...|+.+|...+.+.+.++.+ .++++++++|+.+.++.... ..................+.....
T Consensus 151 --------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 220 (275)
T PRK05876 151 --------AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN--SERIRGAACAQSSTTGSPGPLPLQ 220 (275)
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc--hhhhcCcccccccccccccccccc
Confidence 23457999999866666665543 38999999999998875321 100000000011111122333345
Q ss_pred EeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHH
Q 005949 223 RSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKL 268 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~ 268 (668)
+++++++|+|++++.++.++ +.|.+. .+....++.+...+.
T Consensus 221 ~~~~~~~dva~~~~~ai~~~---~~~~~~--~~~~~~~~~~~~~~~ 261 (275)
T PRK05876 221 DDNLGVDDIAQLTADAILAN---RLYVLP--HAASRASIRRRFERI 261 (275)
T ss_pred ccCCCHHHHHHHHHHHHHcC---CeEEec--ChhhHHHHHHHHHHH
Confidence 67899999999999999865 345554 233444454444443
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-20 Score=176.50 Aligned_cols=214 Identities=14% Similarity=0.147 Sum_probs=142.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-----------------------------------cccccccccCC------hhH
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-----------------------------------PFEYGKGRLED------CSS 422 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-----------------------------------~v~~~~~D~~d------~~~ 422 (668)
++||+||||||+|++|+.+|+.+-. +|..+.+|+.. ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 3699999999999999999998864 24566778763 345
Q ss_pred HHHHhhhcCCCEEEEcccccCCCCccccccccccc-eehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCC
Q 005949 423 LIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDT-IRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGI 500 (668)
Q Consensus 423 ~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~-~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~ 500 (668)
+..+.+.+ |.|||+|+.+ .+-.|++. ...||.||..+++.|.....| +.|+||.+|+......- ...
T Consensus 81 ~~~La~~v--D~I~H~gA~V-------n~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~--~~~ 149 (382)
T COG3320 81 WQELAENV--DLIIHNAALV-------NHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSN--FTV 149 (382)
T ss_pred HHHHhhhc--ceEEecchhh-------cccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCC--Ccc
Confidence 56555555 9999999977 23445544 459999999999999998886 66778888875433221 011
Q ss_pred CCCCCC----CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hHHHHhhc----ccceeec
Q 005949 501 GYKEED----TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISR----YNKVVNI 564 (668)
Q Consensus 501 ~~~ee~----~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~----~~~~~~~ 564 (668)
...+++ ....+.++|++||+++|.+++...+. |+|++++|++.+.|+. +|+.++.. .+..++.
T Consensus 150 ~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~ 228 (382)
T COG3320 150 DFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS 228 (382)
T ss_pred ccccccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc
Confidence 111111 12244588999999999999998875 9999999999998875 45555433 3333322
Q ss_pred CC--CcccHhhHH-----------HHHHHHHhcc--CCceee-ecCCCccCHHHHHHHHHh
Q 005949 565 PN--SMTVLDELL-----------PISIEMAKRN--LRGIWN-FTNPGVVSHNEILEMYKK 609 (668)
Q Consensus 565 ~~--~~~~v~D~a-----------~~~~~~~~~~--~~g~~n-i~~~~~~s~~e~~~~i~~ 609 (668)
.. +...+|+++ +++..+...+ ....|+ ..-|..+...++.+.+..
T Consensus 229 ~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 229 EYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred ccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 11 333333333 2333333211 123444 222788999999999888
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-18 Score=169.37 Aligned_cols=226 Identities=18% Similarity=0.139 Sum_probs=155.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|-.|++++|+||||+|+||++++++|+++ +++|+++ .|... ........ .....+.++.+|++|.+.+.++++
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~ 76 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQ--AADETIREIESNGGKAFLIEADLNSIDGVKKLVE 76 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHH
Confidence 55566789999999999999999999998 6777664 44321 11111111 112357889999999999888775
Q ss_pred c-----------CCCCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCC
Q 005949 78 T-----------ESIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 78 ~-----------~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~ 141 (668)
. .++|+|||+||....... .......+++|+.++.++++.+... ...+++|++||..++.+..
T Consensus 77 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~- 155 (254)
T PRK12746 77 QLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT- 155 (254)
T ss_pred HHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC-
Confidence 3 268999999997543221 1223456789999999999988753 1235899999988765332
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
+...|+.+|.+.|.+.+.++.+ .++++++++|+.+.+|.......-..+........
T Consensus 156 -------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~------- 215 (254)
T PRK12746 156 -------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSS------- 215 (254)
T ss_pred -------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcC-------
Confidence 2456999999999998887664 47999999999999875421000011111111111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
....+++++|+++++..++..+. .+++|+++++
T Consensus 216 --~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 216 --VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred --CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 11246789999999988887542 4678999866
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=173.52 Aligned_cols=228 Identities=17% Similarity=0.145 Sum_probs=159.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++..+.......+.+.. .....++.++.+|+.|.+.+.+++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 667776655322111111111 01133577899999999988877643
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... +...+++...+++|+.++.++++++... ..-.++|++||...|.....
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------- 201 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT--------- 201 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC---------
Confidence 379999999996432 1234456789999999999999988753 11259999999888754321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|.+.+.+++.++.+ .|+++.+++||.+.+|...................+ ...+.+
T Consensus 202 -----~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~ 267 (300)
T PRK06128 202 -----LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQ 267 (300)
T ss_pred -----chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcC
Confidence 345999999999999998765 489999999999999864221111222222222111 123568
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~ 256 (668)
.+|++.+++.++.... .++.|++.+|..+
T Consensus 268 p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 268 PVEMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 8999999998876532 4788999887644
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-18 Score=169.26 Aligned_cols=221 Identities=18% Similarity=0.210 Sum_probs=152.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCc-cccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL-KNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|+++++|||||+|+||+++++.|+++ +++|++++|....... ..+ .....++.++.+|++|.+.+.+++..
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAEL--RAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHH--HhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6788888885321111 011 01123577899999999887776642
Q ss_pred -CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....++....++.|+.++..+++. +++.+ ..++|++||...|+..
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~--------- 151 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGIN--------- 151 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCCC---------
Confidence 369999999985321 122334456778898887755544 44434 5799999998765421
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC-----------CCChHHHHHHHHHcCCCce
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF-----------PEKLIPKFILLAMRGLPLP 214 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~ 214 (668)
..+|+.+|.+.+.+++.++.++ ++++.+++||.|++|... .....+.+......+.++.
T Consensus 152 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T PRK12823 152 -------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK 224 (260)
T ss_pred -------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence 2369999999999999987664 899999999999997421 0112233333333332221
Q ss_pred eecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 215 IHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 215 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
-+.+.+|++++++.++.... .++.+++.+++
T Consensus 225 ---------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 225 ---------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred ---------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 24478999999998886542 46788887664
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=168.20 Aligned_cols=226 Identities=15% Similarity=0.118 Sum_probs=158.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..++++++|||||+|+||++++++|+++ +++|++..+... .....+... ....++.++.+|+.|.+.+.++++.
T Consensus 1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (247)
T PRK12935 1 MVQLNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSK-EAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEE 77 (247)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcH-HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 66777899999999999999999999998 677776544321 111111111 1123588899999999998887754
Q ss_pred -----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
..+|+|||+||...... ..+.+.+.+.+|+.++.++++++... ....++|++||...+.+.
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 150 (247)
T PRK12935 78 AVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------- 150 (247)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-------
Confidence 36899999999754321 22455678899999999999888642 124699999996543221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.+...|+.+|.+.+.+++.++.+. ++++++++||.+.++... ............+ ...+
T Consensus 151 -------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~---------~~~~ 212 (247)
T PRK12935 151 -------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA--EVPEEVRQKIVAK---------IPKK 212 (247)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh--hccHHHHHHHHHh---------CCCC
Confidence 124579999999999988876653 899999999999876431 1111111111111 1234
Q ss_pred eceeHHHHHHHHHHHHhcC--CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG--EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~ 254 (668)
.+.+++|++++++.+++.. ..++.||++++.
T Consensus 213 ~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 213 RFGQADEIAKGVVYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred CCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence 6789999999999988765 357899998764
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9e-19 Score=171.78 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=156.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..|+++++|||||+|+||+++++.|+++ +++|++.+|.... ....+.. .....++.++.+|++|++.+..+++.
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAP-RANKVVAEIEAAGGRASAVGADLTDEESVAALMDT 77 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchH-hHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 67777899999999999999999999998 6788887775321 1111110 01123578899999999998877642
Q ss_pred -----CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 -----ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+|+.... ...++...+++|+.++.++++++...- ...++|++||........ .+.
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------~~~-- 146 (248)
T PRK07806 78 AREEFGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-------VKT-- 146 (248)
T ss_pred HHHhCCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-------ccC--
Confidence 369999999986432 223455678899999999999998642 135899999954321110 011
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
.....+|+.+|..+|.+++.++.+ .++++++++|+.+-++.. ..+... ..+-.+.........+++++
T Consensus 147 ~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~ 217 (248)
T PRK07806 147 MPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT------ATLLNR---LNPGAIEARREAAGKLYTVS 217 (248)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh------hhhhcc---CCHHHHHHHHhhhcccCCHH
Confidence 112457999999999999998654 478899998887766521 111100 00000000000123689999
Q ss_pred HHHHHHHHHHhcCC-CCceEEEcCCCc
Q 005949 230 DVAEAFECILHKGE-VGHVYNVGTKKE 255 (668)
Q Consensus 230 D~a~ai~~~~~~~~-~~~~~ni~~~~~ 255 (668)
|++++++.+++... .+++|++++++.
T Consensus 218 dva~~~~~l~~~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 218 EFAAEVARAVTAPVPSGHIEYVGGADY 244 (248)
T ss_pred HHHHHHHHHhhccccCccEEEecCccc
Confidence 99999999998653 678899998764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-18 Score=173.31 Aligned_cols=231 Identities=17% Similarity=0.122 Sum_probs=154.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.++.++||||||+|+||++++++|+++ +++|++++|... ....+.......++.++.+|+.|++.+.+++.+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEA--ALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999998 678888888532 111111111112568899999999998877743
Q ss_pred -CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCC-cEEEEEcCccccCCCCCCcCCCC
Q 005949 79 -ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQI-RRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....++..+.++.|+.++.++++++. ..+ . ++++++||...+...
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~-------- 154 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGY-------- 154 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCC--------
Confidence 379999999997621 12233456789999999999998774 322 3 578888875432111
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceee---cCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH---GDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 221 (668)
.+...|+.+|...|.+++.++.+ .+++++++|||+++||... ...+........+ ..... .....
T Consensus 155 ------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~ 225 (264)
T PRK12829 155 ------PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR--RVIEARAQQLGIG-LDEMEQEYLEKIS 225 (264)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH--HHhhhhhhccCCC-hhHHHHHHHhcCC
Confidence 12346999999999999987754 3899999999999998642 1111101000000 00000 00011
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
...+++++|+++++..++... ..++.|+++++..
T Consensus 226 ~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 226 LGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred CCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 235899999999998887542 2577899987753
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=168.79 Aligned_cols=224 Identities=18% Similarity=0.175 Sum_probs=156.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
+|+||||||+|+||++++++|+++ +++|++++|............ .....++.++.+|++|++.+.+++.. .
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999 678888887532111000000 01123688999999999988776642 3
Q ss_pred CCCEEEEcCccCCcc------cccCChHHHHHHHHHHHHHHHHHHHHc----CC-----CcEEEEEcCccccCCCCCCcC
Q 005949 80 SIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKVT----GQ-----IRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-----~~~~v~~SS~~vyg~~~~~~~ 144 (668)
++|+|||+||..... .+.+++.+.++.|+.++.++++++... .. +.+||++||...+.+..
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 155 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP---- 155 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence 689999999975321 123445678899999999998887542 11 46899999976643322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|.+.|.+++.++.+ ++++++++|||.+.++.... ....+.+....+ ..+
T Consensus 156 ----------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~--~~~~~~~~~~~~-~~~------- 215 (256)
T PRK12745 156 ----------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP--VTAKYDALIAKG-LVP------- 215 (256)
T ss_pred ----------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc--cchhHHhhhhhc-CCC-------
Confidence 2456999999999999988764 58999999999999875421 222222222221 111
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
...+.+.+|+++++..++... ..+..|++.++..
T Consensus 216 ~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 216 MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLS 252 (256)
T ss_pred cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence 224679999999999887643 2477899987754
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=168.11 Aligned_cols=226 Identities=16% Similarity=0.122 Sum_probs=157.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++||||||+|+||++++++|+++ +++|++.+|.... ...+... ....++..+.+|+.|.+.+.+++..
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAK--LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999998 6789988886421 1111110 1123578899999999998888743
Q ss_pred -CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..++....+.+|+.++.++++++.+. ...+++|++||...+...
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------- 153 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR----------- 153 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC-----------
Confidence 35899999999754322 22234567789999999999988753 125799999996543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
.+...|+.+|...|.+++.++. ++++++.++||+.+.++........+.+...+....+ ...+..
T Consensus 154 ---~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 221 (255)
T PRK07523 154 ---PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGK 221 (255)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcC
Confidence 2345799999999999998875 3589999999999998854211001112222222111 123668
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
++|+|.+++.++.... .++.+++.+|...|
T Consensus 222 ~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 222 VEELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred HHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 9999999999886532 46789998776544
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.2e-18 Score=166.61 Aligned_cols=224 Identities=17% Similarity=0.153 Sum_probs=156.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc--CCccccCC--CcCCCCeEEEEccCCCHHHHHHHh
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC--SNLKNLIP--SKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~--~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|..+++|+||||||+|+||+++++.|+++ +++|+++++.... .....+.. .....++.++.+|+.|.+.+..++
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 78 (249)
T PRK12827 1 MASLDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAAL 78 (249)
T ss_pred CCCcCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 66777889999999999999999999998 6778887653211 11111100 011246789999999999988776
Q ss_pred cc-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH-----HcCCCcEEEEEcCccccCCCCCC
Q 005949 77 IT-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK-----VTGQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 77 ~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~v~~SS~~vyg~~~~~ 142 (668)
+. .++|+|||+||.... ....+++...+.+|+.++.++++++. +.+ .+++|++||...+.+..
T Consensus 79 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-- 155 (249)
T PRK12827 79 DAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNR-- 155 (249)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCC--
Confidence 42 468999999997652 22233455688999999999999987 333 57999999977654322
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
+...|+.+|...+.+++.++.+ .+++++++|||.+.++........ .......+.
T Consensus 156 ------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~------ 213 (249)
T PRK12827 156 ------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPV------ 213 (249)
T ss_pred ------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCC------
Confidence 2356999999999999887654 389999999999999865322111 111111111
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+.+.+|+++++..++... ..++.+++.++.
T Consensus 214 ---~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 214 ---QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred ---cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 12457899999998888643 246678887653
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=170.18 Aligned_cols=230 Identities=14% Similarity=0.044 Sum_probs=156.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++++||||||+|+||++++++|+++ +++|++..+... ........ .....++..+.+|+++.+.+..++..
T Consensus 1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (252)
T PRK06077 1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRA-EEMNETLKMVKENGGEGIGVLADVSTREGCETLAKA 77 (252)
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCh-HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHH
Confidence 54456789999999999999999999998 567766554321 11111000 01123567889999999988777643
Q ss_pred -----CCCCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 -----ESIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||....... .+.....+.+|+.++.++++++.+. ....+||++||...|.+.
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 148 (252)
T PRK06077 78 TIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA--------- 148 (252)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC---------
Confidence 378999999997433221 1123467899999999999888753 123589999998776432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
.+...|+.+|...|.+++.+++++ ++.+.+++|+.+.++..... ...........+ .......+
T Consensus 149 -----~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 215 (252)
T PRK06077 149 -----YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--------KFTLMGKI 215 (252)
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--------hcCcCCCC
Confidence 235679999999999999988765 68999999999987743110 000000000010 01112368
Q ss_pred eeHHHHHHHHHHHHhcCC-CCceEEEcCCCc
Q 005949 226 LYCEDVAEAFECILHKGE-VGHVYNVGTKKE 255 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~ 255 (668)
++++|++++++.+++.+. .++.|++.++..
T Consensus 216 ~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 216 LDPEEVAEFVAAILKIESITGQVFVLDSGES 246 (252)
T ss_pred CCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence 999999999999997543 578999998753
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=168.20 Aligned_cols=214 Identities=14% Similarity=0.149 Sum_probs=153.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... ...........+++.+.+|+.|.+.+.++++.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAP--LSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF 80 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHh--HHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 6789998885421 11111111123567888999999988877642
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+++...... ..++..+.+..|+.++.++++++.+. ..++++|++||...++...
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 149 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP----------- 149 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC-----------
Confidence 36899999999653211 12233466789999999998887531 2378999999988765432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...+.+++.++.. .++++.++|||.++++..... . +. .....|+++
T Consensus 150 ---~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~---------------~--~~--~~~~~~~~~ 207 (239)
T PRK12828 150 ---GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD---------------M--PD--ADFSRWVTP 207 (239)
T ss_pred ---CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc---------------C--Cc--hhhhcCCCH
Confidence 2456999999999998876643 489999999999998843110 0 00 012237899
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 229 EDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+|+++++..++.... .++.+++.++.
T Consensus 208 ~dva~~~~~~l~~~~~~~~g~~~~~~g~~ 236 (239)
T PRK12828 208 EQIAAVIAFLLSDEAQAITGASIPVDGGV 236 (239)
T ss_pred HHHHHHHHHHhCcccccccceEEEecCCE
Confidence 999999998887543 36778887665
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=171.29 Aligned_cols=230 Identities=17% Similarity=0.162 Sum_probs=156.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++||||||+|+||++++++|+++ +++|++++|... ....+.. .....++.++.+|++|.+.+..++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 77 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSE--KAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDE 77 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998 678988888532 1111111 11113588999999999988877643
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCcc-ccCCCCCCcCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDE-VYGETDEDAVVGN 147 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...++.|+.++.++++++.. .+.-.++|++||.. .++..
T Consensus 78 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-------- 149 (259)
T PRK12384 78 IFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK-------- 149 (259)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC--------
Confidence 4689999999975432 12234456779999998877776644 22135899999854 33321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc--CCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR--GLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 222 (668)
....|+.+|.+.+.+++.++. .+++++.++|||.++++.... ..++.+...... ........++...
T Consensus 150 -------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (259)
T PRK12384 150 -------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ-SLLPQYAKKLGIKPDEVEQYYIDKVPL 221 (259)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh-hhhHHHHHhcCCChHHHHHHHHHhCcc
Confidence 235699999999999888774 358999999999998765422 233333222100 0000111223345
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
+.+++.+|++++++.++.... .|+.|++.+|+.
T Consensus 222 ~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 222 KRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred cCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 578899999999998876542 467899998764
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.2e-19 Score=174.53 Aligned_cols=208 Identities=13% Similarity=0.043 Sum_probs=149.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++++|||||+|+||++++++|+++|++| .++.+|++|.+++.+++++. ++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3679999999999999999999999864 23568999998888777642 579999
Q ss_pred EcccccCCCC-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||...... ..+...+....+++|+.++.++++++ ++.+. +++++||..... +.+
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~ 143 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI------------------AYP 143 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc------------------CCC
Confidence 9999762111 11223345567889999999999997 45555 667777754321 112
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCC---CChhh---------------HHHHhhcccceeecCCCcc
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDL---NNPRN---------------FITKISRYNKVVNIPNSMT 569 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~---~g~~~---------------~~~~~~~~~~~~~~~~~~~ 569 (668)
+.+.|+.||...|.+++.+.+ .++++++++||+.+ +|+.. .+...+..+.. .-+.
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 219 (276)
T PRK06482 144 GFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF----AIPG 219 (276)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC----CCCC
Confidence 347899999999999888743 36899999999876 54421 01111111110 1135
Q ss_pred cHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcC
Q 005949 570 VLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYIN 612 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 612 (668)
+++|++++++.++.++ .+..||++++...+..|+++.+.+.++
T Consensus 220 d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 220 DPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred CHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 6899999999999865 556899999999999998888777654
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.7e-20 Score=178.34 Aligned_cols=181 Identities=15% Similarity=0.146 Sum_probs=107.1
Q ss_pred EEcCCcchhHHHHHHHHHcCC--c-------------------------------------ccccccccCCh------hH
Q 005949 388 IYGRTGWIGGLLGKLCEKEGI--P-------------------------------------FEYGKGRLEDC------SS 422 (668)
Q Consensus 388 i~G~~G~iG~~l~~~l~~~g~--~-------------------------------------v~~~~~D~~d~------~~ 422 (668)
|||||||||++|+++|++++. + +.++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 2 24567888764 44
Q ss_pred HHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCC
Q 005949 423 LIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 423 ~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
+..+.+++ |+|||+||.. .+ ..+..+..++||.||.+|++.|.+... +++|+||+.+.+...... . +..
T Consensus 81 ~~~L~~~v--~~IiH~Aa~v-----~~-~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~-~-~~~ 150 (249)
T PF07993_consen 81 YQELAEEV--DVIIHCAASV-----NF-NAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTI-E-EKV 150 (249)
T ss_dssp HHHHHHH----EEEE--SS------SB-S-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT----SSS
T ss_pred hhcccccc--ceeeecchhh-----hh-cccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcc-c-ccc
Confidence 55555665 9999999955 33 234556778999999999999996544 788888855544433211 0 000
Q ss_pred C----CCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------h----HHHHhhcccceee--
Q 005949 502 Y----KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------N----FITKISRYNKVVN-- 563 (668)
Q Consensus 502 ~----~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~----~~~~~~~~~~~~~-- 563 (668)
+ .+.+......+.|..||+++|++++.+.+..+++++++||+.++|.. + ++...+..+....
T Consensus 151 ~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~ 230 (249)
T PF07993_consen 151 YPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLP 230 (249)
T ss_dssp -HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-S
T ss_pred cccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCccccc
Confidence 0 11112233347899999999999999877679999999999999831 2 2222222222221
Q ss_pred ----cCCCcccHhhHHHHH
Q 005949 564 ----IPNSMTVLDELLPIS 578 (668)
Q Consensus 564 ----~~~~~~~v~D~a~~~ 578 (668)
...++++||.+|++|
T Consensus 231 ~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 231 GDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp B---TT--EEEHHHHHHHH
T ss_pred CCCCceEeEECHHHHHhhC
Confidence 125899999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9e-18 Score=164.96 Aligned_cols=225 Identities=15% Similarity=0.067 Sum_probs=152.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|.+++||||||+|+||++++++|+++ +++|+++ .|... ..+.+.. .....++.++.+|++|++.+..+++.
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRK--AAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQID 77 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45679999999999999999999999 5676653 44321 1111110 01134578899999999998887743
Q ss_pred ---CCCCEEEEcCccCCccccc----CChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||........ ++....+++|+.++.++++++... ...++||++||...+...
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 148 (250)
T PRK08063 78 EEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL--------- 148 (250)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC---------
Confidence 2689999999975432222 223346789999999999888652 125699999996554321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
.+...|+.+|.+.|.+++.++.+ .++++++++|+.+..+..........+........ ....+
T Consensus 149 -----~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~ 214 (250)
T PRK08063 149 -----ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT---------PAGRM 214 (250)
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC---------CCCCC
Confidence 23457999999999999987754 48999999999998765321111111221111111 11236
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
++.+|++++++.++..+. .++.+++.++..
T Consensus 215 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 215 VEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred cCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence 889999999998887542 467888887654
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.1e-18 Score=170.35 Aligned_cols=261 Identities=22% Similarity=0.257 Sum_probs=178.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccCCccc-cCC--------------CcCCCCeEEEEccCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSNLKN-LIP--------------SKASSNFKFVKGDIA 67 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~~-~~~--------------~~~~~~~~~~~~Dl~ 67 (668)
+..|+|||||||||+|.-++++|+...+++ ++.++-|......... +.. .....++..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 467999999999999999999999876444 6677777654332111 110 112357889999998
Q ss_pred CHHH------HHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCC
Q 005949 68 SADL------VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 68 d~~~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~ 141 (668)
+++. +.... ..+|+|||+||....+. ........|+.||+++++.|++...++-||++||+.+.-....
T Consensus 90 ~~~LGis~~D~~~l~--~eV~ivih~AAtvrFde---~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~ 164 (467)
T KOG1221|consen 90 EPDLGISESDLRTLA--DEVNIVIHSAATVRFDE---PLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGH 164 (467)
T ss_pred CcccCCChHHHHHHH--hcCCEEEEeeeeeccch---hhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccc
Confidence 8543 33333 68999999999866432 2336778999999999999999988999999999777522110
Q ss_pred ---C-cCCC----------CCCCCC------------CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC
Q 005949 142 ---D-AVVG----------NHEASQ------------LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF 195 (668)
Q Consensus 142 ---~-~~~~----------~~e~~~------------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~ 195 (668)
. .+.. .+|+.. ....+.|..+|+++|.++..+++ ++|++|+||+.|......
T Consensus 165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSIITSTYKE 242 (467)
T ss_pred ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCceeccccC
Confidence 0 0000 011100 11357899999999999987654 799999999999986543
Q ss_pred CCC-hHHH------HHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh--cCCC----CceEEEcCCC--cccHHH
Q 005949 196 PEK-LIPK------FILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH--KGEV----GHVYNVGTKK--ERRVID 260 (668)
Q Consensus 196 ~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~--~~~~----~~~~ni~~~~--~~s~~e 260 (668)
|-. .+.. ++-..-+|.--.+..+....-++|.||.++.+++.+.- .... ..+||++++. ++++.+
T Consensus 243 P~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~ 322 (467)
T KOG1221|consen 243 PFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGD 322 (467)
T ss_pred CCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHH
Confidence 321 1100 11111122222345677788899999999999986652 1112 3499999864 699999
Q ss_pred HHHHHHHHhCC
Q 005949 261 VAKDICKLFSM 271 (668)
Q Consensus 261 l~~~i~~~~g~ 271 (668)
+.+...+....
T Consensus 323 ~~e~~~~~~~~ 333 (467)
T KOG1221|consen 323 FIELALRYFEK 333 (467)
T ss_pred HHHHHHHhccc
Confidence 99988887653
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=164.41 Aligned_cols=222 Identities=14% Similarity=0.141 Sum_probs=155.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc--CCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK--ASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|... ....+.... ...++.++.+|++|.+.+..++..
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAE--RLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE 78 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 678999888642 111111111 124678999999999998877643
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ....+++...++.|+.++..+++++... ...++||++||...+.+.
T Consensus 79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~---------- 148 (258)
T PRK07890 79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ---------- 148 (258)
T ss_pred HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC----------
Confidence 368999999987432 2233455678999999999999988652 113589999997654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCCcee
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMRGLPLPI 215 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~~ 215 (668)
.+...|+.+|...+.+++.++.+ .++++.+++||.+++|.... .+ ..+.....+.
T Consensus 149 ----~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----- 217 (258)
T PRK07890 149 ----PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG--YFRHQAGKYGVTVEQIYAETAAN----- 217 (258)
T ss_pred ----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH--HhhhcccccCCCHHHHHHHHhhc-----
Confidence 23457999999999999998764 38999999999999985311 11 1111111111
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.....+.+++|++++++.++... ..++.+.+.++.
T Consensus 218 ----~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 218 ----SDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred ----CCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 11124678999999999888642 245566665443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=162.65 Aligned_cols=225 Identities=15% Similarity=0.136 Sum_probs=155.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... .+..... ....++.++.+|++|.+.+.+++..
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~ 85 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEE--LEEAAAHLEALGIDALWIAADVADEADIERLAEETLE 85 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999998 6788888885421 1111110 1123577899999999998766532
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+.+...+++|+.++.++++++... ...++||++||...+.+....
T Consensus 86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------ 159 (259)
T PRK08213 86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------ 159 (259)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc------
Confidence 3689999999974321 122334567889999999999987654 235799999997665433211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
..+...|+.+|...|.+++.++.++ ++++.+++|+.+-.+... ..++.+.+......+.. .+
T Consensus 160 ----~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~--~~~~~~~~~~~~~~~~~---------~~ 224 (259)
T PRK08213 160 ----VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR--GTLERLGEDLLAHTPLG---------RL 224 (259)
T ss_pred ----ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh--hhhHHHHHHHHhcCCCC---------CC
Confidence 1234679999999999999987653 799999999988766431 33444444433333222 23
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+|++.++..++.... .|..+++.++
T Consensus 225 ~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 225 GDDEDLKGAALLLASDASKHITGQILAVDGG 255 (259)
T ss_pred cCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 467899998888775432 4667777654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=161.95 Aligned_cols=222 Identities=15% Similarity=0.094 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|+.|.+.+..++..
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEA--AERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6789999886432 1111110 0023578999999999999887743
Q ss_pred -CCCCEEEEcCccCCccc-----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||...... ..+++...+.+|+.++.++.+.+... ...++||++||...+.+..
T Consensus 79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------- 149 (251)
T PRK07231 79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP--------- 149 (251)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC---------
Confidence 26899999999743221 22345578899999888777766531 2368999999987765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHH----HHHHHHHcCCCceeecCCCce
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP----KFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+++.++.++ ++++++++||.+.++.... ... .......... ..
T Consensus 150 -----~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~---------~~ 213 (251)
T PRK07231 150 -----GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA--FMGEPTPENRAKFLATI---------PL 213 (251)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh--hhcccChHHHHHHhcCC---------CC
Confidence 24569999999999998877653 8999999999997764311 111 1111111111 12
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+++++|+|.+++.++.... .+..+.+.++.
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 248 (251)
T PRK07231 214 GRLGTPEDIANAALFLASDEASWITGVTLVVDGGR 248 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence 246899999999999886543 35667776554
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.1e-18 Score=165.19 Aligned_cols=223 Identities=17% Similarity=0.154 Sum_probs=152.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++++|||||+|+||++++++|+++ +++|++++|.... ....... ....++.++.+|+.|++++.++++.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEA--AERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHH--HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999998 6788888876421 1111110 1134578999999999998887743
Q ss_pred -CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||...... ..++....+.+|+.++.++.+.+ ++.+ .++||++||...+.+..
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~--------- 148 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGR--------- 148 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC---------
Confidence 37999999999754221 22334567889999998777655 3434 67999999975533221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCCceeecCCCceE
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---KLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|.+.+.+++.++.+. +++++++|||.++++..... ...+.......... ....
T Consensus 149 -----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 215 (252)
T PRK06138 149 -----GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMN 215 (252)
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCC
Confidence 24569999999999999987654 89999999999998853210 00011111111110 0112
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.+++++|++++++.++.++. .|..+.+.++
T Consensus 216 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 216 RFGTAEEVAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred CCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 36889999999999887653 3556666644
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=161.45 Aligned_cols=210 Identities=17% Similarity=0.161 Sum_probs=145.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCCE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SIDT 83 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~ 83 (668)
++|+||||||+|+||+++++.|+++ ++|++++|... ....+.. ...+++++.+|+.|.+.+.+++... ++|+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~--~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 74 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT---HTLLLGGRPAE--RLDELAA--ELPGATPFPVDLTDPEAIAAAVEQLGRLDV 74 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHH--HHHHHHH--HhccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence 4679999999999999999999987 56888888532 1111111 1135788999999999999888543 6999
Q ss_pred EEEcCccCCcccc----cCChHHHHHHHHHH----HHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHVDNS----FGNSFEFTKNNIYG----THVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 84 Vih~a~~~~~~~~----~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
|||++|....... .++....+..|+.+ +.++++++++. .+++|++||...++... +
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~--------------~ 138 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANP--------------G 138 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCC--------------C
Confidence 9999997543211 12234567888888 44555555553 37899999987765432 2
Q ss_pred CChhHHHHHHHHHHHHHHHHhc-C-CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSY-G-LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
...|+.+|...|.+++.++.+. + +++..++||.+.++.. ..+... .+.. . ....+++++|+++
T Consensus 139 ~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~------~~~~~~--~~~~--~-----~~~~~~~~~dva~ 203 (227)
T PRK08219 139 WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ------RGLVAQ--EGGE--Y-----DPERYLRPETVAK 203 (227)
T ss_pred CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh------hhhhhh--hccc--c-----CCCCCCCHHHHHH
Confidence 3569999999999988876542 4 7888888887665422 111110 0110 1 1235799999999
Q ss_pred HHHHHHhcCCCCceEEEcC
Q 005949 234 AFECILHKGEVGHVYNVGT 252 (668)
Q Consensus 234 ai~~~~~~~~~~~~~ni~~ 252 (668)
+++.+++.+..+.++++.-
T Consensus 204 ~~~~~l~~~~~~~~~~~~~ 222 (227)
T PRK08219 204 AVRFAVDAPPDAHITEVVV 222 (227)
T ss_pred HHHHHHcCCCCCccceEEE
Confidence 9999999877777787763
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-17 Score=161.56 Aligned_cols=226 Identities=17% Similarity=0.152 Sum_probs=157.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|+.+++++||||||+|+||+++++.|+++ +++|++++|.... ...... .....++.++.+|+.|.+++.+++..
T Consensus 2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (250)
T PRK12939 2 ASNLAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAE--ARELAAALEAAGGRAHAIAADLADPASVQRFFDA 77 (250)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 56666899999999999999999999998 6788888775321 111111 11124688999999999998887743
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC---CCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG---QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||++|..... ...++....++.|+.++.++++++...- ...+||++||...+.+..
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 151 (250)
T PRK12939 78 AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP------ 151 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC------
Confidence 4799999999975422 1223345678899999999998875421 135999999966543322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...|.+++.++.+ .++++..++||.+..+....... ..+....... ...+
T Consensus 152 --------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~---------~~~~ 213 (250)
T PRK12939 152 --------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKG---------RALE 213 (250)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhc---------CCCC
Confidence 1346999999999999987654 47999999999998775421110 0122222221 1223
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+++++|++++++.++... ..|+.+.+.++.
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 214 RLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred CCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 4789999999999998754 256778887654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-17 Score=161.61 Aligned_cols=222 Identities=17% Similarity=0.169 Sum_probs=154.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++++|||||+|+||++++++|+++ +++|++++|.... ...+.. .....++.++.+|+.|.+.+.+++..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREA--AEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999998 6788888875421 111111 01134688999999999998887642
Q ss_pred -CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||...... ...+....+++|+.++.++++++. +.+ .+++|++||...+.....
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~-------- 148 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSG-------- 148 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCC--------
Confidence 36899999999743211 122334678999999999888775 333 579999999877765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCce
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
...|+.+|.+.+.+.+.++++. +++++++|||.++++..... .....+........+ .
T Consensus 149 ------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 213 (250)
T TIGR03206 149 ------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP---------L 213 (250)
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC---------c
Confidence 3469999999999998887654 89999999999998843110 000111122222111 1
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+...+|+|+++..++.... .++++++.++.
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 214 GRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 124567899999998886543 46788888653
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=7e-18 Score=205.44 Aligned_cols=225 Identities=15% Similarity=0.198 Sum_probs=158.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC----C----------------------------------cccccccccCC-----
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG----I----------------------------------PFEYGKGRLED----- 419 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g----~----------------------------------~v~~~~~D~~d----- 419 (668)
.++|+|||++||||+++++.|++++ + ++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 3689999999999999999999876 2 13345667653
Q ss_pred -hhHHHHHhhhcCCCEEEEcccccCCCCcccccccccc-ceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCC
Q 005949 420 -CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTD-TIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPE 496 (668)
Q Consensus 420 -~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~-~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~ 496 (668)
.+.+..+..+ +|+|||+|+.. + ...+.. ....|+.|+.+++++|++.++ +++|+||..+|+.....+.
T Consensus 1051 ~~~~~~~l~~~--~d~iiH~Aa~~---~----~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~ 1121 (1389)
T TIGR03443 1051 SDEKWSDLTNE--VDVIIHNGALV---H----WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNL 1121 (1389)
T ss_pred CHHHHHHHHhc--CCEEEECCcEe---c----CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccch
Confidence 3344545444 59999999966 2 222333 345899999999999999887 5788889899864211100
Q ss_pred ------CCCCCCCCCC----CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hHHHHhhcc
Q 005949 497 ------GSGIGYKEED----TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRY 558 (668)
Q Consensus 497 ------~~~~~~~ee~----~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~ 558 (668)
....++.+++ .+..+.+.|+.||+++|+++..+.+ .+++++++|++++||+. .++..++++
T Consensus 1122 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~ 1200 (1389)
T TIGR03443 1122 SDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKG 1200 (1389)
T ss_pred hhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHH
Confidence 0001122221 1222347799999999999998765 48999999999999985 344444432
Q ss_pred c----ceee--cCCCcccHhhHHHHHHHHHhccC----CceeeecCCCccCHHHHHHHHHhhcCCCCCCC
Q 005949 559 N----KVVN--IPNSMTVLDELLPISIEMAKRNL----RGIWNFTNPGVVSHNEILEMYKKYINPEFKWV 618 (668)
Q Consensus 559 ~----~~~~--~~~~~~~v~D~a~~~~~~~~~~~----~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 618 (668)
. .... ...+++++||+|++++.++.+.. ..+||++++..+++.++++.+.+. |.+.+..
T Consensus 1201 ~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~ 1269 (1389)
T TIGR03443 1201 CIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIV 1269 (1389)
T ss_pred HHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCcc
Confidence 2 1122 23489999999999999987542 248999999999999999999764 6665543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=166.01 Aligned_cols=224 Identities=16% Similarity=0.104 Sum_probs=150.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++++|+||||+|+||+++++.|+++ +++|++++|... .+..+. ..+++++.+|++|.+.+.+++..
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~--~l~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVD--KMEDLA----SLGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHH----hCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 35689999999999999999999998 678988888542 121111 23578899999999998887742
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHH----HHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTH----VLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~----~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..+++...+++|+.++. .+++.+++.+ .+++|++||...+....
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~---------- 141 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTP---------- 141 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCC----------
Confidence 37999999999754321 23445678899998854 4455566654 67999999965422111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCc--------eeecCC
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPL--------PIHGDG 219 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 219 (668)
....|+.+|.+.+.+.+.++. .+++++++++||.+.++.... ....+... ..+... ......
T Consensus 142 ----~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 214 (273)
T PRK06182 142 ----LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDI--AADHLLKT-SGNGAYAEQAQAVAASMRST 214 (273)
T ss_pred ----CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchh--hhhhhccc-ccccchHHHHHHHHHHHHHh
Confidence 134699999999999877654 358999999999999875310 00000000 000000 000001
Q ss_pred CceEeceeHHHHHHHHHHHHhcCCCCceEEEcCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTK 253 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~ 253 (668)
...+.+.+.+|+|++++.++........|+++.+
T Consensus 215 ~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 215 YGSGRLSDPSVIADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred hccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence 1123467899999999999887655567777644
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-17 Score=160.51 Aligned_cols=221 Identities=15% Similarity=0.150 Sum_probs=155.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-CCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-ESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d 82 (668)
+++++++||||+|+||+++++.|+++ +++|++++|... ....+.. ..+..++.+|+.|.+.+.+++.. .++|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~d 79 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAA--ALDRLAG---ETGCEPLRLDVGDDAAIRAALAAAGAFD 79 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH---HhCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence 34579999999999999999999998 678999888542 1111111 12456789999999988887754 3589
Q ss_pred EEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|||+||..... ....+....+..|+.++.++++++.+. +..++||++||...+.+..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 145 (245)
T PRK07060 80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-------------- 145 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC--------------
Confidence 999999975432 122345567789999999999888653 1136899999977654422
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+...|+.+|..+|.+++.++.+ .+++++.+||+.++++.......-.......... .....+++++|+
T Consensus 146 ~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~ 216 (245)
T PRK07060 146 DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDV 216 (245)
T ss_pred CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHH
Confidence 2356999999999999988764 3799999999999998642110000011111111 112358899999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCCC
Q 005949 232 AEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 232 a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
++++..++..+. .|+.+++.+|.
T Consensus 217 a~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 217 AAPILFLLSDAASMVSGVSLPVDGGY 242 (245)
T ss_pred HHHHHHHcCcccCCccCcEEeECCCc
Confidence 999999887543 46788887653
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=161.19 Aligned_cols=221 Identities=17% Similarity=0.184 Sum_probs=149.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
++++|||||+|+||++++++|+++ +++|++..+... .....+... ....++.++.+|++|.+++.+++..
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNR-DAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCH-HHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999998 566766654321 111111110 1123577899999999998887742
Q ss_pred CCCCEEEEcCccCCccc-----ccCChHHHHHHHHHHHHHHHHHHHHcC------CCcEEEEEcCccc-cCCCCCCcCCC
Q 005949 79 ESIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVTG------QIRRFIHVSTDEV-YGETDEDAVVG 146 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~v-yg~~~~~~~~~ 146 (668)
.++|+|||+||...... ..++....+++|+.++.++++++.+.- .-.++|++||... ++....
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----- 153 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE----- 153 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC-----
Confidence 36899999999754211 223445789999999999888776421 1246999999654 433210
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
...|+.+|...|.+++.++.+. +++++++||+.++||...... .+..........++..
T Consensus 154 ---------~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~-------- 215 (248)
T PRK06123 154 ---------YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGR-------- 215 (248)
T ss_pred ---------ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCC--------
Confidence 1249999999999999887654 899999999999998542211 2222222222222211
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
+.+++|+++++..++... ..++.|++.++
T Consensus 216 -~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 216 -GGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred -CcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence 237899999999888754 35678888754
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-17 Score=163.11 Aligned_cols=226 Identities=13% Similarity=0.099 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||+++++.|+++ +++|++.++.......+.+.. .....++.++.+|++|.+.+.+++..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678887765432111111111 11123577899999999988776632
Q ss_pred --CCCCEEEEcCccCC-----cccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||... ...+.+++...+++|+.++..+++++... ..-.++|++||...|....
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~---------- 194 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP---------- 194 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC----------
Confidence 36899999999642 12234556788999999999999888652 1126899999988765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+++.++.+ +|+++.+++||.|.+|.................. .+ ...+..
T Consensus 195 ----~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~r~~~ 261 (294)
T PRK07985 195 ----HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQ--TP-------MKRAGQ 261 (294)
T ss_pred ----CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhcc--CC-------CCCCCC
Confidence 1346999999999999988765 4899999999999998532111111111111111 11 113457
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+|++.+++.++.... .+..+.+.+|.
T Consensus 262 pedva~~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 262 PAELAPVYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence 8999999999886533 36677777654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-17 Score=159.89 Aligned_cols=224 Identities=16% Similarity=0.142 Sum_probs=152.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++++||||||+|+||++++++|+++ +++|++++|... ........ ...++.++.+|+.|.+.+..++..
T Consensus 1 m~~~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 1 MSRLQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDPA--SLEAARAE-LGESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHH--HHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 66667789999999999999999999999 678888887532 11111111 123577899999998887665431
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcC-ccccCCCCCCcCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVST-DEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS-~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++|| .+.|+..
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~---------- 145 (249)
T PRK06500 76 EAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP---------- 145 (249)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC----------
Confidence 3689999999975422 123445678999999999999999742 11357777777 4444432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCCceeecCCCce
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF----PEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|...|.+++.++.+. ++++.++|||.+++|... .......+.+......++.
T Consensus 146 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 212 (249)
T PRK06500 146 -----NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG-------- 212 (249)
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC--------
Confidence 24579999999999998877643 899999999999998421 1122333333333322221
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
-+...+|+++++..++.... .+..+.+.+|
T Consensus 213 -~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 213 -RFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred -CCcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 13478999999998886432 2444555443
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=165.39 Aligned_cols=224 Identities=16% Similarity=0.134 Sum_probs=157.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ....+.. .....++.++.+|+.|.+.+.+++..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHE-DANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcch-HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999998 6788888775321 1111111 11123578899999999988877643
Q ss_pred --CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...++.|+.++.++++++... ....++|++||...|.....
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~--------- 191 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET--------- 191 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC---------
Confidence 3689999999975321 222344678899999999999988753 12368999999887755431
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|.+.+.+++.++.++ +++++.++||.++.+..... ........... ......+.+
T Consensus 192 -----~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~-~~~~~~~~~~~---------~~~~~~~~~ 256 (290)
T PRK06701 192 -----LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD-FDEEKVSQFGS---------NTPMQRPGQ 256 (290)
T ss_pred -----cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc-cCHHHHHHHHh---------cCCcCCCcC
Confidence 2359999999999999988764 89999999999998753211 11111111111 112234788
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
++|++++++.++.... .+..+++.++.
T Consensus 257 ~~dva~~~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 257 PEELAPAYVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence 9999999999887642 46778887654
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=151.66 Aligned_cols=206 Identities=17% Similarity=0.221 Sum_probs=161.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCc-----------------------ccccccccCChhHHHHHhhhcCCCEEEEcccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIP-----------------------FEYGKGRLEDCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~-----------------------v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
.+-+.|||||+|++++++|.+.|-. |-+...|+.|++++.++++-. .+|||+.|.
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~s--NVVINLIGr 140 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHS--NVVINLIGR 140 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhC--cEEEEeecc
Confidence 4678999999999999999999953 345677899999999999987 999999984
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
- .+.....+.++|+.+...|++.|++.|+ ++||+|+-. . ....+ |-|-.||.
T Consensus 141 d-------~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lg---a----------------nv~s~-Sr~LrsK~ 193 (391)
T KOG2865|consen 141 D-------YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLG---A----------------NVKSP-SRMLRSKA 193 (391)
T ss_pred c-------cccCCcccccccchHHHHHHHHHHhhChhheeehhhcc---c----------------cccCh-HHHHHhhh
Confidence 4 3556677889999999999999999999 889988743 0 11122 78999999
Q ss_pred HHHHHHHhccCeeEeEEeeeecCCCCChh-hHHHH----hhcccceeecCC------CcccHhhHHHHHHHHHhcc--CC
Q 005949 521 MVEELLKEYDNVCTLRVRMPISSDLNNPR-NFITK----ISRYNKVVNIPN------SMTVLDELLPISIEMAKRN--LR 587 (668)
Q Consensus 521 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~----~~~~~~~~~~~~------~~~~v~D~a~~~~~~~~~~--~~ 587 (668)
++|..+++... ..+|+||..+||.. .|++. ..+.+..+.... .++|+-|+|++|+.+.+.+ .+
T Consensus 194 ~gE~aVrdafP----eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~G 269 (391)
T KOG2865|consen 194 AGEEAVRDAFP----EATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMG 269 (391)
T ss_pred hhHHHHHhhCC----cceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccC
Confidence 99999998532 24789999999986 23332 222333332222 7899999999999999876 56
Q ss_pred ceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHH
Q 005949 588 GIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLE 623 (668)
Q Consensus 588 g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 623 (668)
.+|.+++++.....|+++.+-+.......+...+.+
T Consensus 270 ktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP 305 (391)
T KOG2865|consen 270 KTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMP 305 (391)
T ss_pred ceeeecCCchhhHHHHHHHHHHHHhhccccccCCcH
Confidence 799999999999999999988876664455555544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-17 Score=159.95 Aligned_cols=225 Identities=15% Similarity=0.127 Sum_probs=153.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
.++|++|||||+|+||++++++|+++ +++|+++.+... .....+.. .....++.++.+|++|.+.+.+++..
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSR-DEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35679999999999999999999998 577877655321 11111110 01134688899999999998877642
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHcC---CCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVTG---QIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++.... .-+++|++||...+....
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p--------- 154 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP--------- 154 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC---------
Confidence 358999999996442 12233456788999999999998876532 135888888765443211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...|.+.+.++++. +++++.++||.+..+... ....+... ..... . + ...+
T Consensus 155 -----~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~---~~~~~~~~-~~~~~--~-~------~~~~ 216 (258)
T PRK09134 155 -----DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ---SPEDFARQ-HAATP--L-G------RGST 216 (258)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc---ChHHHHHH-HhcCC--C-C------CCcC
Confidence 12469999999999999987654 489999999988765321 11222221 11111 1 1 1357
Q ss_pred HHHHHHHHHHHHhcCC-CCceEEEcCCCcccH
Q 005949 228 CEDVAEAFECILHKGE-VGHVYNVGTKKERRV 258 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~s~ 258 (668)
++|+|++++.+++.+. .++.|++.++..+++
T Consensus 217 ~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 217 PEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW 248 (258)
T ss_pred HHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence 9999999999998764 467888887764433
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.2e-17 Score=158.75 Aligned_cols=224 Identities=17% Similarity=0.106 Sum_probs=152.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++|++|||||+|+||++++++|+++ +++|++++|.. . .....++..+.+|+.|.+.+.+++.. .
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~----~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF----L-----TQEDYPFATFVLDVSDAAAVAQVCQRLLAETG 75 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch----h-----hhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4589999999999999999999998 68898888853 1 11134688899999999999887743 3
Q ss_pred CCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
++|+|||+||...... ..+++...+++|+.++.++++++... ....++|++||.....+.
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------- 142 (252)
T PRK08220 76 PLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPR------------- 142 (252)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCC-------------
Confidence 5899999999754321 23455678899999999999887531 124689999997543221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
.+...|+.+|...|.+++.++.+ +++++++++||.++++.................+.. ...........+++++
T Consensus 143 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 220 (252)
T PRK08220 143 -IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFP-EQFKLGIPLGKIARPQ 220 (252)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHH-HHHhhcCCCcccCCHH
Confidence 23467999999999999888765 589999999999999854210000000000000000 0000011223578999
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 230 DVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 230 D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
|++++++.++.... .++.+.+.+|.
T Consensus 221 dva~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 221 EIANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred HHHHHHHHHhcchhcCccCcEEEECCCe
Confidence 99999998886432 35556665543
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.6e-17 Score=162.02 Aligned_cols=230 Identities=17% Similarity=0.139 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDL--GQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999998 6888888875321 1111111 1124688999999999998877742
Q ss_pred -CCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccc-cCCCCCCcCCCC
Q 005949 79 -ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEV-YGETDEDAVVGN 147 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ....++|++||... ++...
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------- 164 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG------- 164 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC-------
Confidence 369999999997532 1223445678999999999998877532 11357899888543 33221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---CCC-----hHHHHHHHHHcCCCceee
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---PEK-----LIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---~~~-----~~~~~~~~~~~~~~~~~~ 216 (668)
...|+.+|.+.|.+.+.++.+. ++++.+++||.+.++... +.. .+..+......+.+ +
T Consensus 165 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l- 233 (280)
T PLN02253 165 --------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN--L- 233 (280)
T ss_pred --------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC--C-
Confidence 2369999999999999987754 799999999999876421 110 11111111111111 0
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHH
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERRVID 260 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~e 260 (668)
....++.+|+++++..++.... .++.+++.+|...+..+
T Consensus 234 -----~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 234 -----KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred -----cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhccch
Confidence 0124689999999998886532 46788888776554444
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-17 Score=161.92 Aligned_cols=218 Identities=16% Similarity=0.133 Sum_probs=148.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++++|+||||+|+||++++++|+++ +++|++++|.... .. ...+++++.+|+.|.+.+.+++.. .
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~--~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 72 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPAR--AA------PIPGVELLELDVTDDASVQAAVDEVIARAG 72 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhh--cc------ccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999 6889988885321 11 124688999999999998888743 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||..... ...++....+++|+.++.++++++ ++.+ .+++|++||...+....
T Consensus 73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------- 140 (270)
T PRK06179 73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAP----------- 140 (270)
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCC-----------
Confidence 689999999975432 123345678899999999988875 4444 68999999976544321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
....|+.+|...|.+++.++.+ .++++++++||.+.++..... ..+...... .. ........ ....
T Consensus 141 ---~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~--~~~~ 213 (270)
T PRK06179 141 ---YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRE-RA-VVSKAVAK--AVKK 213 (270)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHH-HH-HHHHHHHh--cccc
Confidence 1356999999999999887644 589999999999988753211 011000000 00 00000000 0112
Q ss_pred ceeHHHHHHHHHHHHhcCCCCceEEEc
Q 005949 225 YLYCEDVAEAFECILHKGEVGHVYNVG 251 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~~~~~~ni~ 251 (668)
....++++++++.++..+.....|..+
T Consensus 214 ~~~~~~va~~~~~~~~~~~~~~~~~~~ 240 (270)
T PRK06179 214 ADAPEVVADTVVKAALGPWPKMRYTAG 240 (270)
T ss_pred CCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence 346789999998888776555556543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=163.90 Aligned_cols=208 Identities=12% Similarity=0.114 Sum_probs=140.8
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCC-hhHHHHHhhhcCCCEEEEccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLED-CSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d-~~~~~~~l~~~~~d~Vih~a~ 440 (668)
.||+|+||||+|+||+.++++|+++|++| .++.+|++| .+.+.+.+.. ++|+|||+++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~-~~d~vi~~~g 94 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGD-DSDAVICATG 94 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhc-CCCEEEECCC
Confidence 35799999999999999999999999865 234567777 3555555521 4699999988
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
.. . ..++...++.|..++.++++++++.++ ++|++||..+|+.....+ .........+...|..+|
T Consensus 95 ~~---~----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~------~~~~~~~~~~~~~~~~~k 161 (251)
T PLN00141 95 FR---R----SFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQI------LNPAYIFLNLFGLTLVAK 161 (251)
T ss_pred CC---c----CCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccc------cCcchhHHHHHHHHHHHH
Confidence 54 1 123445578999999999999999887 677778888886432221 111001111122345679
Q ss_pred HHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--CCceeeecC---
Q 005949 520 AMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTN--- 594 (668)
Q Consensus 520 ~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~--- 594 (668)
..+|++++. .+++++++||+.++++...- ..... ........+++.+|+|+++..++..+ ...++.+.+
T Consensus 162 ~~~e~~l~~----~gi~~~iirpg~~~~~~~~~-~~~~~-~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~ 235 (251)
T PLN00141 162 LQAEKYIRK----SGINYTIVRPGGLTNDPPTG-NIVME-PEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARAD 235 (251)
T ss_pred HHHHHHHHh----cCCcEEEEECCCccCCCCCc-eEEEC-CCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCC
Confidence 999988765 47999999999998763110 00000 00011125789999999999999765 356788776
Q ss_pred CCccCHHHHHHHHHh
Q 005949 595 PGVVSHNEILEMYKK 609 (668)
Q Consensus 595 ~~~~s~~e~~~~i~~ 609 (668)
+...++++|+..+++
T Consensus 236 ~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 236 APKRSYKDLFASIKQ 250 (251)
T ss_pred CCchhHHHHHHHhhc
Confidence 334688888887764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=156.79 Aligned_cols=223 Identities=14% Similarity=0.122 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++++||||||+|+||.+++++|+++ +++|++++|.........+. ....++..+.+|+++.+.+..+++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVE--ALGRRFLSLTADLSDIEAIKALVDSAVEEF 78 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 67899888853211111111 1124588999999999998876642
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..+++.+.+++|+.++.++++++... +...++|++||...|.+..
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 148 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI---------- 148 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC----------
Confidence 36999999999754321 22345567899999999999887532 2146899999987775432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|.+.+.+++.++++. ++++++++||.+..+.......-.......... . ....++.
T Consensus 149 ----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~ 215 (248)
T TIGR01832 149 ----RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--I-------PAGRWGT 215 (248)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--C-------CCCCCcC
Confidence 12369999999999999988764 899999999999887532100000111111111 1 1235788
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.+|+|++++.++.... .|+.+.+.+|
T Consensus 216 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 216 PDDIGGPAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred HHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence 9999999999886432 3555555543
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-16 Score=155.70 Aligned_cols=224 Identities=16% Similarity=0.092 Sum_probs=155.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|++|||||+|+||+++++.|+++ +++|++++|.... .....++.++.+|+.|.+++.+++..
T Consensus 1 ~~~~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 70 (252)
T PRK07856 1 NLDLTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIV 70 (252)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 33467799999999999999999999998 6789888885421 11134678899999999988877643
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...++....+++|+.++..+++++... ....++|++||...+.+..
T Consensus 71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------- 143 (252)
T PRK07856 71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP------- 143 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC-------
Confidence 3689999999965321 222345578899999999999887541 1246899999976543321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...|.+++.++.++ .+.+..++||.+..+.......-........... + ...+
T Consensus 144 -------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~ 207 (252)
T PRK07856 144 -------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATV--P-------LGRL 207 (252)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcC--C-------CCCC
Confidence 24579999999999999988764 3788889999998764311000001111111111 1 1134
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
...+|++++++.++.... .|..+.+.+|...+
T Consensus 208 ~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 208 ATPADIAWACLFLASDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred cCHHHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence 578999999998886532 46778887765433
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.1e-17 Score=162.68 Aligned_cols=233 Identities=14% Similarity=0.138 Sum_probs=156.8
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhh----cC-CCEEEEcccccCC
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQS----VK-PTHVFNAAGVTGR 444 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~----~~-~d~Vih~a~~~~~ 444 (668)
+|+||||||++|++++++|+++|++| ..+.+|+.|++++..+++. .. +|.|||+++..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~-- 78 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPI-- 78 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCC--
Confidence 49999999999999999999999875 2456788999999988842 12 59999998733
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
. . ....+.+++++|++.|++ +|++||..++.+ +..+...|
T Consensus 79 -~-~------------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-------------------------~~~~~~~~ 119 (285)
T TIGR03649 79 -P-D------------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG-------------------------GPAMGQVH 119 (285)
T ss_pred -C-C------------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC-------------------------CchHHHHH
Confidence 0 0 123557899999999995 445555332210 01223345
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh--hH-HHHhhccccee----ecCCCcccHhhHHHHHHHHHhcc--CCceeeecC
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR--NF-ITKISRYNKVV----NIPNSMTVLDELLPISIEMAKRN--LRGIWNFTN 594 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~--~~-~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~ 594 (668)
+++... .+++++++|++.++... .+ ...+...+... +...++++++|+|+++..++..+ .+++||+++
T Consensus 120 ~~l~~~---~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g 196 (285)
T TIGR03649 120 AHLDSL---GGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLG 196 (285)
T ss_pred HHHHhc---cCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeC
Confidence 555431 47899999998777532 11 11222222222 12238999999999999999865 467999999
Q ss_pred CCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccC-CC----------------C-CccChhHHHhhcC-CccChHH
Q 005949 595 PGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAP-RS----------------N-NEMDASKLKKEFP-ELLSIKD 655 (668)
Q Consensus 595 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-~~----------------~-~~ld~~k~~~~~g-~~~~~~~ 655 (668)
++.+|+.|+++.+.+.+|+++.+..++..+........ -+ + ....+.-+++++| +++++++
T Consensus 197 ~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~ 276 (285)
T TIGR03649 197 PELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPRGFRD 276 (285)
T ss_pred CccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCccHHH
Confidence 99999999999999999999887777655432211100 00 0 0113555666778 6778887
Q ss_pred HHHHHH
Q 005949 656 SLIKYV 661 (668)
Q Consensus 656 ~l~~~~ 661 (668)
-+++..
T Consensus 277 ~~~~~~ 282 (285)
T TIGR03649 277 FAESNK 282 (285)
T ss_pred HHHHhh
Confidence 777653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-16 Score=156.82 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|+++++.... ...+... ...++.++.+|+.|.+.+.+++..
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~--~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRER--GSKVAKA-LGENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHH--HHHHHHH-cCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45789999999999999999999999 6788888775321 1111111 123578899999999887665532
Q ss_pred CCCCEEEEcCccCCcc------cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~---------- 152 (255)
T PRK05717 83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP---------- 152 (255)
T ss_pred CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------
Confidence 2589999999975421 123345678999999999999998631 1236899999976543321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|.+.|.+++.++.++ ++++.+++||.+.++........ .+.... ... .+ ...+.+.
T Consensus 153 ----~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~-~~~-~~-------~~~~~~~ 218 (255)
T PRK05717 153 ----DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAE-PLSEAD-HAQ-HP-------AGRVGTV 218 (255)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccch-HHHHHH-hhc-CC-------CCCCcCH
Confidence 13469999999999999988775 58999999999998753211111 111110 010 01 1135688
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 229 EDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+|++.++..++.... .++.+.+.++.
T Consensus 219 ~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 219 EDVAAMVAWLLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred HHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence 999999988876432 35667776543
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.9e-17 Score=166.36 Aligned_cols=189 Identities=13% Similarity=0.112 Sum_probs=133.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|+.+++++||||||+|+||.++++.|+++ +++|++++|.... ....... ....++.++.+|+.|.+++.+++..
T Consensus 1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 76 (322)
T PRK07453 1 MSQDAKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKK--AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDD 76 (322)
T ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHH
Confidence 77777899999999999999999999999 6788888875321 1111110 1123688899999999998877743
Q ss_pred -----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHH----cCC-CcEEEEEcCccccCCCCC-C
Q 005949 79 -----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQ-IRRFIHVSTDEVYGETDE-D 142 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~~v~~SS~~vyg~~~~-~ 142 (668)
.++|+|||+||.... ..+.+++...+.+|+.|+.++++++.. .+. ..++|++||...+..... .
T Consensus 77 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~ 156 (322)
T PRK07453 77 FRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK 156 (322)
T ss_pred HHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc
Confidence 359999999996432 123344567889999999998877654 221 359999999776532110 0
Q ss_pred --cCC--C----------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc----CCCEEEEeeCceeCCC
Q 005949 143 --AVV--G----------------NHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPN 193 (668)
Q Consensus 143 --~~~--~----------------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~ 193 (668)
... . ..+..+..|...|+.||.+.+.+.+.+++++ ++.++++|||+|++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 000 0 0011234566789999999988888877654 7999999999998654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=155.02 Aligned_cols=194 Identities=17% Similarity=0.116 Sum_probs=142.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
|..+++++||||||+|+||++++++|+++ ++ +|++++|.... ... ...++.++.+|+.|.+.+.+++...
T Consensus 1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~--~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~ 71 (238)
T PRK08264 1 MMDIKGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPES--VTD-----LGPRVVPLQLDVTDPASVAAAAEAA 71 (238)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhh--hhh-----cCCceEEEEecCCCHHHHHHHHHhc
Confidence 44456789999999999999999999999 56 78888886421 111 2346889999999999998887543
Q ss_pred -CCCEEEEcCccCC-c----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 80 -SIDTIMHFAAQTH-V----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 80 -~~d~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.+|+|||+||... . ....+++...+.+|+.++.++++++.. .+ .++||++||...+.+..
T Consensus 72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~--------- 141 (238)
T PRK08264 72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFP--------- 141 (238)
T ss_pred CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCC---------
Confidence 5899999999732 1 122344557788999999999988653 33 57899999977665332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|...|.+.+.++.+. +++++++||+.+.++.... .. + ..+
T Consensus 142 -----~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~--------------~~------~----~~~ 192 (238)
T PRK08264 142 -----NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG--------------LD------A----PKA 192 (238)
T ss_pred -----CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc--------------CC------c----CCC
Confidence 24579999999999998876553 8999999999987663210 00 0 135
Q ss_pred eHHHHHHHHHHHHhcC
Q 005949 227 YCEDVAEAFECILHKG 242 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~ 242 (668)
..+|++++++..+..+
T Consensus 193 ~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 193 SPADVARQILDALEAG 208 (238)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 6678888887777654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.1e-17 Score=159.40 Aligned_cols=209 Identities=18% Similarity=0.131 Sum_probs=146.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++||||||+|+||+++++.|+++ +++|++++|.... .+.+.. .....++.++.+|+.|.+.+..++..
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 76 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETR--LASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF 76 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999998 6789998886421 111110 01134688899999999998887743
Q ss_pred CCCCEEEEcCccCCcccc-----cCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDNS-----FGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||....... .+.....+++|+.++.++++.+... ...+++|++||...+.+..
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 145 (263)
T PRK06181 77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP----------- 145 (263)
T ss_pred CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-----------
Confidence 268999999997543221 2224567899999999999887531 1247899999977764322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...|.+.+.++.+ .++++++++||.+..+.... .. . ..+.. ....+.+...++++
T Consensus 146 ---~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~--~~----~--~~~~~--~~~~~~~~~~~~~~ 212 (263)
T PRK06181 146 ---TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR--AL----D--GDGKP--LGKSPMQESKIMSA 212 (263)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh--hc----c--ccccc--cccccccccCCCCH
Confidence 2457999999999999887643 48999999999988764310 00 0 01111 11112223478999
Q ss_pred HHHHHHHHHHHhcC
Q 005949 229 EDVAEAFECILHKG 242 (668)
Q Consensus 229 ~D~a~ai~~~~~~~ 242 (668)
+|+++++..+++.+
T Consensus 213 ~dva~~i~~~~~~~ 226 (263)
T PRK06181 213 EECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHHHHhhCC
Confidence 99999999999854
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.6e-17 Score=143.97 Aligned_cols=249 Identities=16% Similarity=0.137 Sum_probs=185.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-Cc-c----------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG-IP-F----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g-~~-v----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
.||||||+-|.+|..+++.|..+- -+ | .++-.|+.|...+++.+-+.+.|++||+.+.-+
T Consensus 45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLS-- 122 (366)
T KOG2774|consen 45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLS-- 122 (366)
T ss_pred CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHHH--
Confidence 489999999999999999887662 11 1 345578889999999999889999999988651
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCC-CCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAA-HPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~-~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
-..+.+.....++|+.|..|+++.+++++.++++-||...||.... +| +.+-+...|.+.||.||.-+|.
T Consensus 123 --AvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNP-------TPdltIQRPRTIYGVSKVHAEL 193 (366)
T KOG2774|consen 123 --AVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNP-------TPDLTIQRPRTIYGVSKVHAEL 193 (366)
T ss_pred --HhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCC-------CCCeeeecCceeechhHHHHHH
Confidence 2246778888999999999999999999999999999999986543 33 3344555788999999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChh------------hHHHHhhcccc----eeecCCCcccHhhHHHHHHHHHhcc---
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNK----VVNIPNSMTVLDELLPISIEMAKRN--- 585 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~----~~~~~~~~~~v~D~a~~~~~~~~~~--- 585 (668)
+-..|..++++.++.+|.+++.... -|...+-+++- ..+.+..+.|+.|+.++++.++..+
T Consensus 194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~ 273 (366)
T KOG2774|consen 194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS 273 (366)
T ss_pred HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence 9988888899999999988765331 23333333332 2344557889999999999988654
Q ss_pred -CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC
Q 005949 586 -LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 586 -~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g 648 (668)
...+||+.+ -..|-.|++..+.+.+- ...+.+.+. .....++.-...+|-+.++..+-
T Consensus 274 lkrr~ynvt~-~sftpee~~~~~~~~~p-~~~i~y~~~---srq~iad~wp~~~dds~ar~~wh 332 (366)
T KOG2774|consen 274 LKRRTYNVTG-FSFTPEEIADAIRRVMP-GFEIDYDIC---TRQSIADSWPMSLDDSEARTEWH 332 (366)
T ss_pred hhhheeeece-eccCHHHHHHHHHhhCC-Cceeecccc---hhhhhhhhcccccCchhHhhHHH
Confidence 567999986 88899999999988742 122111111 11223333355778777776643
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=157.60 Aligned_cols=221 Identities=14% Similarity=0.090 Sum_probs=152.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|++|||||+|+||++++++|+++ +++|++++|.... ..++.++.+|+.|++.+.+++..
T Consensus 1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~-----------~~~~~~~~~D~~~~~~i~~~~~~~~ 67 (258)
T PRK06398 1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPS-----------YNDVDYFKVDVSNKEQVIKGIDYVI 67 (258)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccc-----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence 66677899999999999999999999999 6789888875321 12578899999999998877642
Q ss_pred ---CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||...... ..++....+++|+.++..+++++... ....++|++||...+....
T Consensus 68 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 139 (258)
T PRK06398 68 SKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR-------- 139 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC--------
Confidence 36999999999754221 22334567899999999998877532 2257999999976654321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC------ChHHHHHHHHHcCCCceeecCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE------KLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|.+.+.+.+.++.+. ++++..++||.+-.+..... .....+.+.... +....
T Consensus 140 ------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 207 (258)
T PRK06398 140 ------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMH 207 (258)
T ss_pred ------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcC
Confidence 24579999999999999987764 48899999998876532100 000000000000 00001
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
....+...+|++++++.++.... .|+.+.+.+|.
T Consensus 208 ~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 208 PMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred CcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 11235678999999998886432 45666666553
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-16 Score=151.24 Aligned_cols=213 Identities=16% Similarity=0.185 Sum_probs=148.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc----cC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI----TE 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~ 79 (668)
|+.|+||||||+|+||++++++|+++ +++|++++|.... . ...+++.+|+.|.+.+.+++. ..
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~----~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAID----D-------FPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCccc----c-------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 34579999999999999999999999 6889998886421 0 112578999999988776663 23
Q ss_pred CCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||...... ..++....++.|+.++.++.+++. +.+ .+++|++||...|+...
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------- 135 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFGALD----------- 135 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccCCCC-----------
Confidence 7899999999755322 223455678899999888876553 334 67999999987765432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|...|.+++.++.+ .+++++++|||.+..+..... ..............+ + ..+..
T Consensus 136 ----~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~ 202 (234)
T PRK07577 136 ----RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP--M-------RRLGT 202 (234)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC--C-------CCCcC
Confidence 356999999999999887654 489999999999988753210 001111111111111 1 12347
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+|++++++.++..+ ..+..+++.++.
T Consensus 203 ~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 203 PEEVAAAIAFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence 899999999988754 246677776554
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=157.51 Aligned_cols=228 Identities=19% Similarity=0.184 Sum_probs=148.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|...... ...+........+.++.+|+.|++++.+++..
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 678888877532110 01110111123466779999999998887743
Q ss_pred --CCCCEEEEcCccCCc-------ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 --ESIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+|+.... ....+.....+.+|+.++..+++++ ++.+ .+++|++||...+......
T Consensus 80 ~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~--- 155 (256)
T PRK09186 80 KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFE--- 155 (256)
T ss_pred HcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccch---
Confidence 248999999975321 1122334567788887777666544 3334 5799999996654432211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
..+..+..+...|+.+|...+.+.+.++.+ .++++++++||.++++.. ..+........ ..
T Consensus 156 -~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~---------~~ 219 (256)
T PRK09186 156 -IYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCC---------NG 219 (256)
T ss_pred -hccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcC---------Cc
Confidence 112222223346999999999999877664 479999999998886532 11222211111 01
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+++++|++++++.++.... .+..+.+.+|
T Consensus 220 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 220 KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred cCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence 246899999999999986542 3666776655
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=154.96 Aligned_cols=221 Identities=16% Similarity=0.212 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||..+++.|+++ +++|++++|.... ...... .....++.++.+|+.|.+.+.+++..
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEK--LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAE 78 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 5788888875421 111100 11134678899999999888776643
Q ss_pred --CCCCEEEEcCccCCc-------------ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCC
Q 005949 79 --ESIDTIMHFAAQTHV-------------DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGET 139 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-------------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~ 139 (668)
.++|+|||+||.... +...++....+..|+.++..+.+.+. +...-.++|++||...|+..
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~ 158 (253)
T PRK08217 79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM 158 (253)
T ss_pred HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC
Confidence 358999999996431 11223345677899999987765443 22223579999998776543
Q ss_pred CCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceee
Q 005949 140 DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 140 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (668)
. ...|+.+|.+.|.+++.++++ .+++++.++|+.+.++... ...+.+........+
T Consensus 159 ~---------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~--~~~~~~~~~~~~~~~---- 217 (253)
T PRK08217 159 G---------------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA--AMKPEALERLEKMIP---- 217 (253)
T ss_pred C---------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc--ccCHHHHHHHHhcCC----
Confidence 2 456999999999999888754 4899999999999988652 222333333322221
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKK 254 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~ 254 (668)
...+.+.+|+++++..++.... .+++|++.++.
T Consensus 218 -----~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 218 -----VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred -----cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 1235688999999998887543 57789988764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.1e-17 Score=158.64 Aligned_cols=222 Identities=15% Similarity=0.135 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++++|..... .........++..+.+|+.+.+.+.+++..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVA---EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHH---HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999998 67898888864211 111111123567899999999988877643
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...++..+.+++|+.++.++++++... ...++||++||.....+..
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 156 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE----------- 156 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC-----------
Confidence 3689999999975422 122344568899999999999887642 1257999999965432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|.+.+.+++.++.+ .++++..++||.+..+..... ............ . ....+.+.
T Consensus 157 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~--~-------~~~~~~~~ 223 (255)
T PRK06841 157 ---RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA-WAGEKGERAKKL--I-------PAGRFAYP 223 (255)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc-cchhHHHHHHhc--C-------CCCCCcCH
Confidence 1346999999999999988765 389999999999987743210 000111111111 1 12246799
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 229 EDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+|++++++.++.... .|+.+.+.+|.
T Consensus 224 ~~va~~~~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 224 EEIAAAALFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 999999999887542 46777777654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=156.27 Aligned_cols=204 Identities=20% Similarity=0.155 Sum_probs=145.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.++++++|||||+|+||.+++++|+++ +++|++++|.... ...... .....++.++.+|+.+++.+.++++.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEEN--LKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLK 79 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 345689999999999999999999998 6789988886421 111111 11234688899999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...++..+.+++|+.++.++++++... ...+++|++||...+....
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------- 151 (239)
T PRK07666 80 NELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA-------- 151 (239)
T ss_pred HHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC--------
Confidence 3799999999975432 122344578899999999998877631 2257899999966544322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|.+.+.+++.++.+ .+++++++|||.+.++...... ... .. ...+
T Consensus 152 ------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~--------~~~-------~~---~~~~ 207 (239)
T PRK07666 152 ------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG--------LTD-------GN---PDKV 207 (239)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc--------ccc-------cC---CCCC
Confidence 2356999999999998887644 4899999999999877431100 000 01 1135
Q ss_pred eeHHHHHHHHHHHHhcC
Q 005949 226 LYCEDVAEAFECILHKG 242 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~ 242 (668)
+..+|+++++..+++++
T Consensus 208 ~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 208 MQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 78899999999999875
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=154.58 Aligned_cols=222 Identities=18% Similarity=0.181 Sum_probs=151.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
|.+++||||||+|+||++++++|+++ +++|+++.+.... ....... .....++.++.+|+.|.+.+.+++++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEA-GAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchh-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 6777666664321 1111100 01234678899999999998877643
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCcc-ccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDE-VYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~-vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||...... ..+.+...+..|+.++.++++++... ...++||++||.. +++..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~--------- 150 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP--------- 150 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC---------
Confidence 36899999999754321 22234567889999999999888753 1256899999953 33332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...+.+++.++++ .++++++++||.+.++... ...+.+........+ ...+
T Consensus 151 ------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~ 213 (248)
T PRK05557 151 ------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD--ALPEDVKEAILAQIP---------LGRL 213 (248)
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc--ccChHHHHHHHhcCC---------CCCC
Confidence 1456999999999888876653 3799999999988665432 222223332222211 1235
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+++|++.++..++... ..++.|++.++.
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 214 GQPEEIASAVAFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred cCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence 68999999998877652 246789998653
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=154.71 Aligned_cols=223 Identities=17% Similarity=0.131 Sum_probs=150.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..++++++|||||+|+||++++++|+++ ++.|++.+|... .++.+... ...++.++.+|+.|.+++.+++..
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVE--KLEALAAE-LGERVKIFPANLSDRDEVKALGQKAE 75 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHH-hCCceEEEEccCCCHHHHHHHHHHHH
Confidence 66677889999999999999999999999 567777766431 11111111 123578899999999998877532
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccc-cCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEV-YGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ...++||++||... ++...
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------- 148 (245)
T PRK12936 76 ADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG------- 148 (245)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC-------
Confidence 4699999999975421 123345678899999999998876431 12579999999644 33321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
...|+.+|...+.+++.++.+ .++++++++|+.+..+.... ........... .. ....
T Consensus 149 --------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~--~~-------~~~~ 209 (245)
T PRK12936 149 --------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK--LNDKQKEAIMG--AI-------PMKR 209 (245)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc--cChHHHHHHhc--CC-------CCCC
Confidence 245999999888888776654 37999999999886653311 11111111111 11 1123
Q ss_pred ceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+...+|+++++..++.... .|+.+++.++.
T Consensus 210 ~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 210 MGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred CcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence 5678999999988775432 46788888664
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-17 Score=161.96 Aligned_cols=197 Identities=15% Similarity=0.111 Sum_probs=142.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
||+|+||||+|+||++|+++|+++|+++ .++.+|+.|++++.+++++. ++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999863 34568999999888887764 68
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||....+.. ..........+++|+.++.++++.+ ++.+. +++++||...+.+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~---------------- 149 (249)
T PRK12825 86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG---------------- 149 (249)
T ss_pred CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC----------------
Confidence 999999996511111 1123345667889999999999998 34555 6777787765522
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH---HHHhhcccceeecCCCcccHhhHHHHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---ITKISRYNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
......|+.+|...|.++..+.+ ..+++++++||+.++++... ............ ...+++.+|+++++..
T Consensus 150 --~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~ 226 (249)
T PRK12825 150 --WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETP-LGRSGTPEDIARAVAF 226 (249)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCC-CCCCcCHHHHHHHHHH
Confidence 12236799999999998877643 35899999999999998621 111111100111 1247889999999999
Q ss_pred HHhcc----CCceeeecCCCcc
Q 005949 581 MAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~~~~ 598 (668)
++... .+.+|+++++..+
T Consensus 227 ~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 227 LCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred HhCccccCcCCCEEEeCCCEee
Confidence 99654 3679999988654
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=154.96 Aligned_cols=221 Identities=15% Similarity=0.150 Sum_probs=145.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|++||||||+|+||+++++.|+++ +++|+++ .|... ....... .....++..+.+|+.|.+.+.+++..
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~ 76 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLH--AAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH 76 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChH--HHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 368999999999999999999998 5777654 34221 1111110 11123578899999999998887742
Q ss_pred -CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHc------CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT------GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...++....+++|+.++.++++++... +...+||++||...+.+...
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~----- 151 (247)
T PRK09730 77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG----- 151 (247)
T ss_pred CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC-----
Confidence 3689999999975321 122234578899999998887665432 11357999999755432211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...|.+++.++.+ .+++++++||+.+++|....... +..........+..
T Consensus 152 --------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~--------- 213 (247)
T PRK09730 152 --------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPMQ--------- 213 (247)
T ss_pred --------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCCC---------
Confidence 1135999999999998877654 48999999999999996432222 12222222222211
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
-..+.+|+++++..++... ..+..|++.++
T Consensus 214 ~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 214 RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence 1237899999999888654 24556766653
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=161.77 Aligned_cols=194 Identities=15% Similarity=0.134 Sum_probs=135.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++|+||||+||||++++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRL 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999864 13457899999888888764 68
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc----CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|+|||+||....... .....++..++++|+.++.++++++... +..++.++| +. ++.
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~--~~----------------~~~ 148 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD--IH----------------AER 148 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC--hh----------------hcC
Confidence 999999996521111 1123456778889999999999999653 222332222 11 123
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCee--EeEEeeeecCCCCChhh---H----HHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN---F----ITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~---~----~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+.++.+.|+.+|..+|.+++.+.+.. ++++..+||+.+++|.. + ......... ...+..++|+|+++
T Consensus 149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~~~ 224 (249)
T PRK09135 149 PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTP----LKRIGTPEDIAEAV 224 (249)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCC----cCCCcCHHHHHHHH
Confidence 44566889999999999999875432 59999999999999852 1 111111111 11223589999999
Q ss_pred HHHHhc-c--CCceeeecCCCccC
Q 005949 579 IEMAKR-N--LRGIWNFTNPGVVS 599 (668)
Q Consensus 579 ~~~~~~-~--~~g~~ni~~~~~~s 599 (668)
..++.. . .+.+||++++..++
T Consensus 225 ~~~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 225 RFLLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred HHHcCccccccCcEEEECCCeecc
Confidence 666643 2 46689999988765
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=155.25 Aligned_cols=207 Identities=15% Similarity=0.107 Sum_probs=147.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..-+|+++|||||+|+||+.++++|+++ +++|++++|.... ...+.. .....++.++.+|++|.+.+..++..
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDA--LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAE 76 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHH
Confidence 66667789999999999999999999998 5789988886421 111111 01124688899999999988777642
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...++....+..|+.++.++++.+. +.+ ..++|++||...+++..
T Consensus 77 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----- 150 (241)
T PRK07454 77 LLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFP----- 150 (241)
T ss_pred HHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCC-----
Confidence 3699999999975422 1223455678899999888777653 333 57899999988765432
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.+ .+++++++|||.+-.+........ ... ..
T Consensus 151 ---------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~------------~~~-----~~ 204 (241)
T PRK07454 151 ---------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ------------ADF-----DR 204 (241)
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc------------ccc-----cc
Confidence 2456999999999998876643 489999999999887643111000 000 01
Q ss_pred EeceeHHHHHHHHHHHHhcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..++..+|+|++++.++..+.
T Consensus 205 ~~~~~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 205 SAMLSPEQVAQTILHLAQLPP 225 (241)
T ss_pred ccCCCHHHHHHHHHHHHcCCc
Confidence 134689999999999998764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.8e-16 Score=152.06 Aligned_cols=220 Identities=17% Similarity=0.150 Sum_probs=151.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++++|.... ....++.++.+|+.|.+.+..++..
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPD---------DLPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhh---------hcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999998 6789988885321 1123578899999999987765532
Q ss_pred CCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.++.++.+++ ++.+ ..++|++||...+....
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~-------- 146 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLP-------- 146 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC--------
Confidence 368999999995421 1223445678899999998776654 3333 46899999976543311
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHH-----------HHHHHHcC-CCc
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPK-----------FILLAMRG-LPL 213 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~-----------~~~~~~~~-~~~ 213 (668)
.+...|+.+|...+.+++.++.+ .++++.+++||.|.++... ..... ........ ...
T Consensus 147 -----~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T PRK06523 147 -----ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV--ALAERLAEAAGTDYEGAKQIIMDSLGGI 219 (260)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH--HHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence 12457999999999999888754 3799999999999988531 11111 11111000 001
Q ss_pred eeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 214 PIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 214 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
+ ...+...+|+++++..++... ..++.+.+.+|...|
T Consensus 220 p-------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 220 P-------LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred c-------cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 1 122457899999999888643 246788888776543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-17 Score=159.73 Aligned_cols=222 Identities=21% Similarity=0.300 Sum_probs=155.4
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEcC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFA 88 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~a 88 (668)
|+|+||||.+|+++++.|++. +++|.++.|.........+ ...+++++.+|+.|.+.+.+++ .++|+||.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l----~~~g~~vv~~d~~~~~~l~~al--~g~d~v~~~~ 72 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQL----QALGAEVVEADYDDPESLVAAL--KGVDAVFSVT 72 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHH----HHTTTEEEES-TT-HHHHHHHH--TTCSEEEEES
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhh----hcccceEeecccCCHHHHHHHH--cCCceEEeec
Confidence 799999999999999999996 7888888886532222221 1347889999999999999999 7999999887
Q ss_pred ccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHH
Q 005949 89 AQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 168 (668)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~ 168 (668)
+.... .......+++++|+++| |++||+.|....+... ....|..+.-..|...|+
T Consensus 73 ~~~~~------------~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~-----------~~~~p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 73 PPSHP------------SELEQQKNLIDAAKAAG-VKHFVPSSFGADYDES-----------SGSEPEIPHFDQKAEIEE 128 (233)
T ss_dssp SCSCC------------CHHHHHHHHHHHHHHHT--SEEEESEESSGTTTT-----------TTSTTHHHHHHHHHHHHH
T ss_pred Ccchh------------hhhhhhhhHHHhhhccc-cceEEEEEeccccccc-----------ccccccchhhhhhhhhhh
Confidence 75431 12345588999999999 9999975544333211 111223345567888888
Q ss_pred HHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHH-HcCC--CceeecCCCceEece-eHHHHHHHHHHHHhcCCC
Q 005949 169 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLA-MRGL--PLPIHGDGSNVRSYL-YCEDVAEAFECILHKGEV 244 (668)
Q Consensus 169 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~i-~v~D~a~ai~~~~~~~~~ 244 (668)
.+++ .+++++++|+|..+.. ++..+.... .... .+.+.+++.....++ +.+|+++++..++..+..
T Consensus 129 ~l~~----~~i~~t~i~~g~f~e~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~ 198 (233)
T PF05368_consen 129 YLRE----SGIPYTIIRPGFFMEN------LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK 198 (233)
T ss_dssp HHHH----CTSEBEEEEE-EEHHH------HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred hhhh----ccccceeccccchhhh------hhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence 7754 3899999999986642 111111111 1222 356677777777775 999999999999887643
Q ss_pred ---CceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005949 245 ---GHVYNVGTKKERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 245 ---~~~~ni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
+..+.++ ++.+|..|+++.+.+.+|.+.
T Consensus 199 ~~~~~~~~~~-~~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 199 HNNGKTIFLA-GETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp TTEEEEEEEG-GGEEEHHHHHHHHHHHHTSEE
T ss_pred hcCCEEEEeC-CCCCCHHHHHHHHHHHHCCcc
Confidence 3567776 488999999999999999863
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=176.74 Aligned_cols=231 Identities=19% Similarity=0.145 Sum_probs=160.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
++++||||||+|+||++++++|+++ +++|++++|.... ........ ...++..+.+|++|.+.+.+++..
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~--~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEA--AEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHH--HHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999998 6789999886421 11111100 013688999999999988877642
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... .+.+.+...+++|+.++.++++++. +.+.-.+||++||...+....
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~---------- 566 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP---------- 566 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC----------
Confidence 3799999999975432 1233455788999999999977664 333126899999976543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCcee-CCCCCCCChHHHHHHHHHcCCCc----eeecCCCce
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVY-GPNQFPEKLIPKFILLAMRGLPL----PIHGDGSNV 222 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 222 (668)
....|+.+|...+.+++.++.++ ++++.+++|+.|| +++....... ..+....+... ..+..+...
T Consensus 567 ----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~l 640 (681)
T PRK08324 567 ----NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI--EARAAAYGLSEEELEEFYRARNLL 640 (681)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh--hhhhhhccCChHHHHHHHHhcCCc
Confidence 24579999999999999987654 6999999999998 6543222111 11111112111 123345566
Q ss_pred EeceeHHHHHHHHHHHHh--c-CCCCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILH--K-GEVGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~--~-~~~~~~~ni~~~~~ 255 (668)
+.+++++|+++++..++. . ...+++|++.+|..
T Consensus 641 ~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 641 KREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred CCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 789999999999998874 2 23577899988764
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-16 Score=153.28 Aligned_cols=226 Identities=18% Similarity=0.132 Sum_probs=151.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..++++++|||||+|.||.+++++|+++ +++|++++|... .+..+... ....++.++.+|+.|++.+.+++.+
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQA--ELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL 76 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 45566789999999999999999999998 678988888642 11111111 1123578899999999988877642
Q ss_pred -----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|+|||+||.... ....++....+++|+.++..+.+. +++.+ ..++|++||...+....
T Consensus 77 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~---- 151 (254)
T PRK07478 77 AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGF---- 151 (254)
T ss_pred HHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCC----
Confidence 379999999997431 122234567889999887777554 34433 56899999976553211
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
.+...|+.+|.+.+.+++.++.+. ++++.+++||.+-.+........+..........+
T Consensus 152 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--------- 213 (254)
T PRK07478 152 ---------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA--------- 213 (254)
T ss_pred ---------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC---------
Confidence 124579999999999999887654 79999999999987632110001111111111111
Q ss_pred eEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+...+|++++++.++.... .|+.+.+.++
T Consensus 214 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 214 LKRMAQPEEIAQAALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence 1124578999999998886532 4566666554
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-16 Score=154.58 Aligned_cols=227 Identities=13% Similarity=0.088 Sum_probs=156.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCE-EEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYK-IVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~-v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++++|+||||+|+||+.++++|+++ +++ |++++|.... ...... .....++.++.+|+.|++++.+++.
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEK--GEAQAAELEALGAKAVFVQADLSDVEDCRRVVA 76 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 77788899999999999999999999998 566 8888875321 111100 1113357788999999999887764
Q ss_pred c-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcC
Q 005949 78 T-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
. .++|+|||+||..... ...+.....+++|+.++.++++++... +...++|++||...++...
T Consensus 77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---- 152 (260)
T PRK06198 77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP---- 152 (260)
T ss_pred HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC----
Confidence 3 3689999999975422 122334567899999999998877432 2135899999988766432
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC-----CChHHHHHHHHHcCCCceee
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~ 216 (668)
....|+.+|...|.+++.++.++ +++++.++|+.++++.... ......+........
T Consensus 153 ----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----- 217 (260)
T PRK06198 153 ----------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ----- 217 (260)
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC-----
Confidence 13569999999999999877654 6899999999999886411 001111111111111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
....+++.+|+++++..++... ..++.+++.++.
T Consensus 218 ----~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 218 ----PFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred ----CccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 1234678999999999887543 246777777543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.2e-16 Score=152.68 Aligned_cols=224 Identities=15% Similarity=0.079 Sum_probs=152.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+.++++|||||+|+||++++++|+++ +++|++.+|... .+..+... ....++..+.+|++|.+.+.+++..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAE--RAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHH--HHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999998 678998888632 11111111 1123577889999999998877642
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... +...+++...+++|+.++..+++++... ....++|++||.....+.
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 152 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR---------- 152 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC----------
Confidence 368999999997432 1223445578899999999888876542 224789999996532111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
.+...|+.+|.+.+.+++.++.+ +++++.+++||.+.++..........+........+ ...+.
T Consensus 153 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~ 219 (254)
T PRK08085 153 ----DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWG 219 (254)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCc
Confidence 12457999999999999998765 389999999999998854211001112122221111 12356
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 227 YCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+|++.++..++.... .|+...+.+|.
T Consensus 220 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 220 DPQELIGAAVFLSSKASDFVNGHLLFVDGGM 250 (254)
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence 88999999988886432 45566665543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-16 Score=152.31 Aligned_cols=217 Identities=17% Similarity=0.091 Sum_probs=149.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
|..|++++||||||+|+||++++++|+++ +++|++++|... ....+.... ...+++++.+|+.|.+++.+++..
T Consensus 1 m~~~~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (237)
T PRK07326 1 MMSLKGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQK--ELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAI 76 (237)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHH--HHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHH
Confidence 55566789999999999999999999998 678998888542 111111111 114688999999999998877743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||++|..... ...++....+.+|+.++.++++++... ...+++|++||...+...
T Consensus 77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------- 147 (237)
T PRK07326 77 VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF--------- 147 (237)
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC---------
Confidence 3799999999875432 122334567899999999988887542 124689999997654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
.+...|+.+|...+.+.+.++.+ .+++++++||+.+.++....... .. .. ..
T Consensus 148 -----~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-----------~~-------~~--~~ 202 (237)
T PRK07326 148 -----AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-----------EK-------DA--WK 202 (237)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc-----------hh-------hh--cc
Confidence 12456999999999888886543 48999999999987764311000 00 00 12
Q ss_pred eeHHHHHHHHHHHHhcCCC--CceEEEcCCCc
Q 005949 226 LYCEDVAEAFECILHKGEV--GHVYNVGTKKE 255 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~~--~~~~ni~~~~~ 255 (668)
+..+|++++++.++..+.. .....+..+.+
T Consensus 203 ~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~~ 234 (237)
T PRK07326 203 IQPEDIAQLVLDLLKMPPRTLPSKIEVRPSRP 234 (237)
T ss_pred CCHHHHHHHHHHHHhCCccccccceEEecCCC
Confidence 6789999999999877642 33444444433
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=152.85 Aligned_cols=223 Identities=16% Similarity=0.155 Sum_probs=151.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|++++||||||+|+||++++++|+++ +.+|++++|...... ...+ .....++.++.+|+.+.+.+..++..
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEEL--RALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHH--HhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 567887777543210 0011 01134688999999999998877743
Q ss_pred -CCCCEEEEcCccCCcc---cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+||..... ...++....++.|+.++.++.+.+... ...++||++||...+.+.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------- 147 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ------------- 147 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-------------
Confidence 3689999999964321 112345568899999999998877531 113689999997654322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH------HHHHHHHcCCCceeecCCCceE
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP------KFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.+...|+.+|...|.+++.++.+ .++++..++||.+++|.... .+. ......... .+. + .
T Consensus 148 -~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~--~~~---~---~ 216 (258)
T PRK08628 148 -GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN--WIATFDDPEAKLAAITAK--IPL---G---H 216 (258)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH--HhhhccCHHHHHHHHHhc--CCc---c---c
Confidence 12457999999999999988753 48999999999999985311 110 011111111 111 0 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.++..+|+++++..++... ..++.+.+.++.
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 250 (258)
T PRK08628 217 RMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY 250 (258)
T ss_pred cCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence 3678899999999988654 245667776543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.5e-16 Score=151.31 Aligned_cols=221 Identities=17% Similarity=0.195 Sum_probs=152.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++||||||+|+||++++++|+++ +++|++++|... .....+.. .....++.++.+|+.|.+.+.+++..
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999998 678998887632 11111111 11134588999999999988877642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ....+++...+..|+.++.++.++ +++.+ ..+||++||...+.+..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~---------- 147 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQF---------- 147 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCC----------
Confidence 369999999997532 222344557888999999888554 45444 67999999977664322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|.+.+.+++.++.+ .++++++++|+.+.++.... ..+..........+ ...+..
T Consensus 148 ----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--~~~~~~~~~~~~~~---------~~~~~~ 212 (245)
T PRK12824 148 ----GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ--MGPEVLQSIVNQIP---------MKRLGT 212 (245)
T ss_pred ----CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh--cCHHHHHHHHhcCC---------CCCCCC
Confidence 1346999999999988887653 38999999999998875421 11122222222211 122456
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+|+++++..++... -.|+.+++.++..
T Consensus 213 ~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 213 PEEIAAAVAFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred HHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence 889999998887543 2478899887753
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.8e-16 Score=155.49 Aligned_cols=166 Identities=16% Similarity=0.173 Sum_probs=124.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc------
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT------ 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------ 78 (668)
++++||||||+|+||+++++.|+++ +++|++++|... .+..+. ..+++.+.+|++|.+.+..++..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~--~~~~l~----~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 74 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEE--DVAALE----AEGLEAFQLDYAEPESIAALVAQVLELSG 74 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHH----HCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999998 688999888542 122211 13578899999999988777642
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHH----HHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYG----THVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..++....+++|+.| ++.+++.+++.+ .+++|++||...+.+.
T Consensus 75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~----------- 142 (277)
T PRK05993 75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM----------- 142 (277)
T ss_pred CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC-----------
Confidence 36899999999754322 122345678999998 666777777655 6799999996544321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCC
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPN 193 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~ 193 (668)
.+...|+.+|.+.|.+.+.++. .+|+++++++||.+-.+.
T Consensus 143 ---~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 143 ---KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred ---CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 2345799999999999988753 358999999999987663
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6e-16 Score=152.57 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=150.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++++||||||+|+||.+++++|+++ +++|++++|......+..... ....++.++.+|+.|.+.+..++.+ .
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGTNWDETRRLIE-KEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHH-hcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999998 678888877522111111111 1124688999999999988877642 2
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|++||+||..... ...+++...+++|+.++..+.+++. +.+ ..++|++||...+.+..
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 158 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGK----------- 158 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCC-----------
Confidence 689999999975421 1223455678899999887776654 333 47999999987664432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|.+.+.+++.++++. ++++.+++||.+..+.................. .+ ...+...
T Consensus 159 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~ 226 (258)
T PRK06935 159 ---FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR--IP-------AGRWGEP 226 (258)
T ss_pred ---CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc--CC-------CCCCCCH
Confidence 13469999999999999987754 799999999999877532110001111111111 11 1235678
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 229 EDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
+|++.++..++.... .|+++.+.+|
T Consensus 227 ~dva~~~~~l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 227 DDLMGAAVFLASRASDYVNGHILAVDGG 254 (258)
T ss_pred HHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 999999988876432 4667777655
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=153.11 Aligned_cols=197 Identities=15% Similarity=0.191 Sum_probs=139.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcC-CCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKA-SSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
+|+||||||+|+||++++++|+++ +++|++++|... .+..+..... ..++.++.+|++|.+++.+++.. .
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTD--ALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 469999999999999999999998 678988888532 1111111111 11688999999999998877632 2
Q ss_pred CCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHH----HHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLE----ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.+|+|||+||..... ...+++...+++|+.++.++++ .+++.+ .+++|++||...+.+..
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~---------- 146 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLP---------- 146 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC----------
Confidence 489999999975421 1223456788999999999776 444444 57999999865542221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+.+.++. .++++++++|||.+.++..... .... ..++.
T Consensus 147 ----~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--------------~~~~-------~~~~~ 201 (257)
T PRK07024 147 ----GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN--------------PYPM-------PFLMD 201 (257)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC--------------CCCC-------CCccC
Confidence 134699999999999988763 3589999999999988743110 0000 01357
Q ss_pred HHHHHHHHHHHHhcC
Q 005949 228 CEDVAEAFECILHKG 242 (668)
Q Consensus 228 v~D~a~ai~~~~~~~ 242 (668)
.+++++.++.++.++
T Consensus 202 ~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 202 ADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHHHHhCC
Confidence 889999999988754
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.1e-16 Score=151.56 Aligned_cols=222 Identities=15% Similarity=0.113 Sum_probs=152.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++|+||||+|+||++++++|+++ +++|++++|.... +..+... ....++..+.+|+.|.+.+..+++.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAAT--LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 6789999886421 1111110 1133588999999999988777642
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+.+.. .+ .+++|++||...+....
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~-------- 155 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARA-------- 155 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCC--------
Confidence 3679999999975422 22234556789999999999966643 33 57999999965533221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|.+.+.+++.++.+ .++++.+++||.+.++.......-..+....... .+ ...+
T Consensus 156 ------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~ 220 (256)
T PRK06124 156 ------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TP-------LGRW 220 (256)
T ss_pred ------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CC-------CCCC
Confidence 1356999999999999887654 3799999999999988532110011111111111 11 1237
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
++.+|++.+++.++..+. .|+.+.+.++
T Consensus 221 ~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 221 GRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred CCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence 889999999999987653 3555566544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.7e-16 Score=151.14 Aligned_cols=224 Identities=14% Similarity=0.121 Sum_probs=154.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||+++++.|+++ +.++++++|.... ...+.. .....++.++.+|++|.+++.+++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADA--ANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999998 6788888775321 111111 01123578889999999998776642
Q ss_pred --CCCCEEEEcCccCCcc---cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...++.|+.++.++++++... ....++|++||.....+.
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 153 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN----------- 153 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------
Confidence 3689999999975422 223345567899999999999988631 124599999997643221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
.+...|+.+|.+.+.+++.++.+ .++++.++.||.+-.+.... ...+.+.....+..+ ...+..
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~ 220 (255)
T PRK06113 154 ---INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTP---------IRRLGQ 220 (255)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc-ccCHHHHHHHHhcCC---------CCCCcC
Confidence 12456999999999999998754 37899999999988764321 112223222222211 113568
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
.+|++++++.++.... .|+.+++.++..
T Consensus 221 ~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 221 PQDIANAALFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence 8999999999887532 467888887643
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=148.83 Aligned_cols=222 Identities=14% Similarity=0.108 Sum_probs=150.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-C
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-E 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~ 79 (668)
|..+++++||||||+|+||+++++.|+++ +++|++..+... ...+.+.. ..++..+.+|+.|.+.+.+.+.. .
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~-~~~~~l~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSK-DAAERLAQ---ETGATAVQTDSADRDAVIDVVRKSG 74 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCH-HHHHHHHH---HhCCeEEecCCCCHHHHHHHHHHhC
Confidence 77777899999999999999999999998 677877655321 11111111 12456788999999988887754 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
++|+|||+||..... ...+++...+++|+.++..++..+... ....++|++||..... .+..
T Consensus 75 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-------------~~~~ 141 (237)
T PRK12742 75 ALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-------------MPVA 141 (237)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-------------CCCC
Confidence 589999999975421 223445678999999999997655442 2246999999964311 1122
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+...|+.+|...|.+++.++.+ .++++.+++||.+..+...... + ........ .++ ..+...+|+
T Consensus 142 ~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~-~~~~~~~~--~~~-------~~~~~p~~~ 209 (237)
T PRK12742 142 GMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--P-MKDMMHSF--MAI-------KRHGRPEEV 209 (237)
T ss_pred CCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--H-HHHHHHhc--CCC-------CCCCCHHHH
Confidence 3567999999999999887664 3799999999999876532111 1 11111111 111 124678999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCC
Q 005949 232 AEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 232 a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
++++..++.... .|..+.+.++
T Consensus 210 a~~~~~l~s~~~~~~~G~~~~~dgg 234 (237)
T PRK12742 210 AGMVAWLAGPEASFVTGAMHTIDGA 234 (237)
T ss_pred HHHHHHHcCcccCcccCCEEEeCCC
Confidence 999998886532 3556666544
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.8e-16 Score=151.35 Aligned_cols=224 Identities=13% Similarity=0.100 Sum_probs=154.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
..+++|++|||||+|.||++++++|+++ +++|++++|... ..+.+.. .....++.++.+|+.|.+.+.+++.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 80 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDAD--ALAQARDELAEEFPEREVHGLAADVSDDEDRRAILD 80 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 3456789999999999999999999999 678888887542 1111111 1113468889999999998877664
Q ss_pred c-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 78 T-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
. .++|+|||+||.... ....+++...+.+|+.++.++++++. +.+ .+++|++||...+.+..
T Consensus 81 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---- 155 (257)
T PRK09242 81 WVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVR---- 155 (257)
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCC----
Confidence 2 368999999997432 12334456788999999999988774 233 57999999976654432
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...+.+++.++.+ .++++..++||.+.++..........+........++.
T Consensus 156 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~------- 218 (257)
T PRK09242 156 ----------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMR------- 218 (257)
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCC-------
Confidence 2456999999999999987654 38999999999999886422111122222222222111
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
-+...+|++.++..++... ..++.+.+.++
T Consensus 219 --~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 219 --RVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred --CCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 2346789999998888643 24566676644
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-16 Score=153.49 Aligned_cols=230 Identities=14% Similarity=0.126 Sum_probs=148.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCc--cCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY--CSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~--~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
++++||||||+|+||.++++.|+++ +++|+++.+... ......+... ....++.++.+|++|.+.+.+++..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 4589999999999999999999998 567655544321 1111111110 0123678899999999998877743
Q ss_pred ---CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ..+.++....+++|+.++..+++++... ....++++++|..+....
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~----------- 153 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT----------- 153 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------
Confidence 368999999997432 2223345678899999999999887643 112466665332221111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
.....|+.+|.+.|.+++.++++. ++++++++||.+.++...+.... .... ....... ..+...+.+.+
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~--~~~~~~~--~~~~~~~~~~~ 225 (257)
T PRK12744 154 ---PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA-EAVA--YHKTAAA--LSPFSKTGLTD 225 (257)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc-chhh--ccccccc--ccccccCCCCC
Confidence 113569999999999999998764 69999999999987643221110 0000 0000000 01111224778
Q ss_pred HHHHHHHHHHHHhcCC--CCceEEEcCCCc
Q 005949 228 CEDVAEAFECILHKGE--VGHVYNVGTKKE 255 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~--~~~~~ni~~~~~ 255 (668)
.+|++.++..+++... .++++++.++..
T Consensus 226 ~~dva~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 226 IEDIVPFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred HHHHHHHHHHhhcccceeecceEeecCCcc
Confidence 9999999999988532 467888887643
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.5e-16 Score=151.51 Aligned_cols=223 Identities=13% Similarity=0.052 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||.+++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQ--LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 6799999886421 1111111 1124688899999999998877642
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+.+|+.++.++++++... ...+++|++||...+.+
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------- 153 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA---------- 153 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC----------
Confidence 3799999999964321 223445678899999999999998641 22578999999543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
..+...|+.+|..++.+++.++.+. ++++..++||.+..+....-.--..+........ ....+.
T Consensus 154 ----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 220 (263)
T PRK07814 154 ----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKAT---------PLRRLG 220 (263)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC---------CCCCCc
Confidence 1234579999999999999887754 5788889999887653210000011111111111 111245
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
..+|++++++.++... ..++.+.+.++
T Consensus 221 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 221 DPEDIAAAAVYLASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 7899999999988653 24556666544
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-15 Score=145.56 Aligned_cols=214 Identities=20% Similarity=0.212 Sum_probs=147.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-CCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-ESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d 82 (668)
+++++++||||+|+||++++++|+++ +++|++++|..... ...++..+.+|+.+. +.++++. .++|
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~--~~~~~~~~~~id 69 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD--LEPLFDWVPSVD 69 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccc---------cCCcEEEEECChHHH--HHHHHHhhCCCC
Confidence 45689999999999999999999998 67888888753211 123578899999997 4444332 4799
Q ss_pred EEEEcCccCC-----cccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|||+||... .+...++....+++|+.++.++++++... ....++|++||...+....
T Consensus 70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 135 (235)
T PRK06550 70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG-------------- 135 (235)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC--------------
Confidence 9999999642 12223345678999999999999877531 1246899999976543221
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
....|+.+|...+.+.+.++.++ ++++++++||.+.++..........+........+ ...+...+|+
T Consensus 136 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 206 (235)
T PRK06550 136 GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEV 206 (235)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHH
Confidence 13469999999999998877654 89999999999988754211111112222222111 1235678999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCC
Q 005949 232 AEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 232 a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
|++++.++.... .+..+.+.+|
T Consensus 207 a~~~~~l~s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 207 AELTLFLASGKADYMQGTIVPIDGG 231 (235)
T ss_pred HHHHHHHcChhhccCCCcEEEECCc
Confidence 999999886432 4566666655
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=150.26 Aligned_cols=223 Identities=17% Similarity=0.149 Sum_probs=149.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++++||||||+|+||.+++++|+++ +++|++++|... ....+... ....++..+.+|+.|.+.+..++..
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLD--GCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999998 678999988532 11111111 1123577899999999988776642
Q ss_pred ---CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... +...++....++.|+.++..+++++ ++.+ ..++|++||...+.+.
T Consensus 81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------- 152 (252)
T PRK07035 81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPG------- 152 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCC-------
Confidence 368999999996421 1223334568899999998888766 3323 5799999986443221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.+...|+.+|.++|.+++.++.++ ++++..+.||.+-.+.......-..+........+ ..
T Consensus 153 -------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~ 216 (252)
T PRK07035 153 -------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LR 216 (252)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CC
Confidence 234579999999999999987653 79999999999876542110000111222211111 11
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.+...+|+++++..++.... .|+.+++.++
T Consensus 217 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 217 RHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred CcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 24578899999998886542 4566776644
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-15 Score=149.23 Aligned_cols=224 Identities=18% Similarity=0.157 Sum_probs=150.3
Q ss_pred CCC-CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 1 MAT-YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 1 m~~-~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
|.+ +++|++|||||+|+||+++++.|+++ +++|++..+... .....+. ..++.++.+|+.|.+.+.+++..
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~-~~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAE-NEAKELR----EKGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcH-HHHHHHH----hCCCeEEEecCCCHHHHHHHHHHH
Confidence 443 24689999999999999999999999 677877655421 1111111 12578899999999998887743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHH----HHHHHcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLL----EACKVTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++..+. +.+++.+ ..++|++||...++...
T Consensus 74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~------ 146 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAA------ 146 (255)
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCC------
Confidence 3689999999975321 123345578899999965554 4444433 57999999987764321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCCceeecCCC
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
.+...|+.+|.+.+.+++.++.+ .++++.+++||.+-.+.... ......+........
T Consensus 147 -------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--------- 210 (255)
T PRK06463 147 -------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT--------- 210 (255)
T ss_pred -------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---------
Confidence 12346999999999999998765 48999999999886653211 111111111111111
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
....+...+|++++++.++.... .|..+.+.+|.
T Consensus 211 ~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 211 VLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred CcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence 11234678999999999886532 46778887664
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=149.52 Aligned_cols=223 Identities=14% Similarity=0.115 Sum_probs=151.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||+|.||++++++|+++ +++|++++|.........+ .....++.++.+|++|.+.+.+++++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQV--EALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHH--HHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 44689999999999999999999998 7888888774321111111 11134678899999999998887743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... ...+++...+++|+.++..+.+++.. .+.-.++|++||...+.+...
T Consensus 82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------- 152 (251)
T PRK12481 82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--------- 152 (251)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---------
Confidence 3699999999975421 12345567889999999888876643 222368999999876644321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|.+.+.+.+.++.+ +|+++..++||.+-.+.................. ++. ..+..
T Consensus 153 -----~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~-------~~~~~ 218 (251)
T PRK12481 153 -----VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILER--IPA-------SRWGT 218 (251)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc--CCC-------CCCcC
Confidence 236999999999999987764 4899999999998766421100001111111111 111 12567
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.+|+++++..++.... .|+.+.+.+|
T Consensus 219 peeva~~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 219 PDDLAGPAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHHHHhCccccCcCCceEEECCC
Confidence 8999999998886432 3556666544
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.5e-16 Score=151.61 Aligned_cols=166 Identities=19% Similarity=0.176 Sum_probs=119.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++||||||+|+||++++++|+++ +++|++++|.... ...+.. .....++.++.+|+.|.+.+..++. .++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-~~id~ 76 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQ--VTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-WDVDV 76 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-CCCCE
Confidence 568999999999999999999998 6788888875321 111110 0112358889999999999988873 48999
Q ss_pred EEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 84 Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
|||+||....... .++....+++|+.++.++.+. +++.+ .++||++||...+... ..
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~--------------~~ 141 (257)
T PRK09291 77 LLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITG--------------PF 141 (257)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCC--------------CC
Confidence 9999997543221 222345778899887776654 34444 5899999996543221 12
Q ss_pred CChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeC
Q 005949 156 TNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYG 191 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G 191 (668)
...|+.+|...|.+++.++.+ .+++++++|||.+..
T Consensus 142 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 142 TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 357999999999998876543 589999999998754
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.1e-16 Score=150.64 Aligned_cols=206 Identities=17% Similarity=0.114 Sum_probs=140.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 81 (668)
|+|+||||+|+||.++++.|+++ +++|++++|... .+..+... ...++.++.+|+.|.+.+.+++.. .++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQE--RLQELKDE-LGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999998 678999888642 11111111 123678899999999998877642 379
Q ss_pred CEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 82 DTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 82 d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
|+|||+||.... ....++....+++|+.++..+++.+ ++.+ .+++|++||...+..
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-------------- 140 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWP-------------- 140 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCC--------------
Confidence 999999996421 1233445678899999976666554 3433 679999999755322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
..+...|+.+|.+.|.+.+.++.+. ++++.+++||.+.|+......+-..... .. ..+. ...++..+
T Consensus 141 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~-~~-----~~~~----~~~~~~~~ 210 (248)
T PRK10538 141 YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGK-AE-----KTYQ----NTVALTPE 210 (248)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHH-HH-----hhcc----ccCCCCHH
Confidence 1234579999999999999887653 7999999999998764311000000000 00 0000 11346889
Q ss_pred HHHHHHHHHHhcC
Q 005949 230 DVAEAFECILHKG 242 (668)
Q Consensus 230 D~a~ai~~~~~~~ 242 (668)
|+|++++.++..+
T Consensus 211 dvA~~~~~l~~~~ 223 (248)
T PRK10538 211 DVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999988755
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=149.10 Aligned_cols=216 Identities=18% Similarity=0.176 Sum_probs=149.2
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----CCC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----ESI 81 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 81 (668)
||||||+|+||++++++|+++ +++|++++|... .....+.. .....++.++.+|++|.+.+.+++.. .++
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSE-EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCch-hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999 678888887542 11111111 01123578899999999998887643 368
Q ss_pred CEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCcc-ccCCCCCCcCCCCCCCCCC
Q 005949 82 DTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDE-VYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 82 d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~ 153 (668)
|+|||+||.... ....+++...++.|+.++.++++++... ...++||++||.. +||...
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~------------- 144 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG------------- 144 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC-------------
Confidence 999999997542 1223445678899999999999988653 2256999999964 444321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
...|+.+|.+.+.+++.++++ .+++++++||+.+.++... ...+.+........+ ...+.+++|
T Consensus 145 --~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~ 211 (239)
T TIGR01830 145 --QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD--KLSEKVKKKILSQIP---------LGRFGTPEE 211 (239)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh--hcChHHHHHHHhcCC---------cCCCcCHHH
Confidence 346999999999988887654 4899999999988765331 111222222222211 112568899
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCC
Q 005949 231 VAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 231 ~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
++++++.++... ..+++||+.++
T Consensus 212 ~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 212 VANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 999998888543 24678998754
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=150.19 Aligned_cols=225 Identities=18% Similarity=0.156 Sum_probs=147.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+|++|||||+|+||+++++.|+++ +++|++++|.... ...+... ....++.++.+|+.|++.+.+++..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEET--AQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF 77 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 579999999999999999999998 6789888875421 1111111 1124678899999999988777642
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..++....+++|+.++..+++.+... +...++|++||...+.+..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 147 (256)
T PRK08643 78 GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP---------- 147 (256)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC----------
Confidence 36899999998754221 12334567889999988777666532 2235899999965432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHH--cCCCcee----ecCCCc
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAM--RGLPLPI----HGDGSN 221 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~ 221 (668)
....|+.+|...+.+++.++.+ .+++++.++||.+.+|... .+..... .+.+... ......
T Consensus 148 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (256)
T PRK08643 148 ----ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMF------DIAHQVGENAGKPDEWGMEQFAKDIT 217 (256)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhh------HHHhhhccccCCCchHHHHHHhccCC
Confidence 1456999999999999887764 4899999999999887431 0000000 0000000 000001
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+...+|++.++..++... ..|..+.+.+|.
T Consensus 218 ~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 218 LGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence 113557899999999888643 246667776553
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-15 Score=148.49 Aligned_cols=227 Identities=13% Similarity=0.101 Sum_probs=153.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..++++++|||||+|+||++++++|+++ +++|++.+|.... .+..+... ....++..+.+|+.|.+.+.+++..
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~ 79 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDD-GLAETAEHIEAAGRRAIQIAADVTSKADLRAAVAR 79 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcch-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 34456789999999999999999999998 6789888875421 11111110 1123578899999999988877643
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...++....+++|+.++..+++++. +.+ ..++|++||...+.....
T Consensus 80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~---- 154 (254)
T PRK06114 80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG---- 154 (254)
T ss_pred HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC----
Confidence 3589999999975422 1234456788999999988776653 322 468999999765432211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
.+...|+.+|.+.+.+.+.++.+ +++++.+++||.+.++........ .......... ++
T Consensus 155 --------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~-~~~~~~~~~~--p~------- 216 (254)
T PRK06114 155 --------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMV-HQTKLFEEQT--PM------- 216 (254)
T ss_pred --------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccch-HHHHHHHhcC--CC-------
Confidence 01346999999999999988764 489999999999988754211111 1111111111 11
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+...+|++.+++.++.... .|+++.+.+|
T Consensus 217 ~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 217 QRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred CCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence 124578999999998886432 4667777655
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=150.66 Aligned_cols=226 Identities=15% Similarity=0.093 Sum_probs=153.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..++++++|||||+|+||++++++|+++ +++|++++|... ....+... ...++.++.+|+.|.+.+.+++..
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDAD--NGAAVAAS-LGERARFIATDITDDAAIERAVATVV 75 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCeeEEEEecCCCHHHHHHHHHHHH
Confidence 66677899999999999999999999999 678998888532 11111111 123588899999999998877643
Q ss_pred ---CCCCEEEEcCccCCc---ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ....+++...+++|+.++..+++++... ..-.++|++||...+.+..
T Consensus 76 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 145 (261)
T PRK08265 76 ARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT---------- 145 (261)
T ss_pred HHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC----------
Confidence 368999999996432 2233445678899999999998876531 1236899999965532221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...+.+++.++.+ +++++.+++||.+..+.... .... ........ ... ....+
T Consensus 146 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~-~~~~~~~~-~~~-------p~~r~ 212 (261)
T PRK08265 146 ----GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR-AKADRVAA-PFH-------LLGRV 212 (261)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch-hHHHHhhc-ccC-------CCCCc
Confidence 1346999999999999988765 37999999999887663210 0000 00000000 000 11124
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...+|+++++..++.... .++.+.+.+|.
T Consensus 213 ~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 213 GDPEEVAQVVAFLCSDAASFVTGADYAVDGGY 244 (261)
T ss_pred cCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence 578999999999887532 46677777664
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-15 Score=154.78 Aligned_cols=223 Identities=13% Similarity=0.057 Sum_probs=142.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++++||||||+|+||+++++.|+++ +++|++++|.... ....... ..++.++.+|++|.+++.+++.. .
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~--~~~~~~~--l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDV--AREALAG--IDGVEVVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHH--hhhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999 6788888885321 1111111 12478899999999998877642 4
Q ss_pred CCCEEEEcCccCCcc--cccCChHHHHHHHHHHHHHHHH----HHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLE----ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++|+|||+||..... ...+.....+.+|+.++..+.+ .+++.+ ..++|++||...+..... ..+.....+.
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~--~~~~~~~~~~ 175 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIR--WDDPHFTRGY 175 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCC--ccccCccCCC
Confidence 699999999975321 1233456788999999666555 444443 469999999754322110 0000111223
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
.+...|+.+|.+.+.+.+.++++ .++++++++||.+.++.....................++ . ..+...+|
T Consensus 176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~ 249 (315)
T PRK06196 176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPI-D-----PGFKTPAQ 249 (315)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhh-h-----hhcCCHhH
Confidence 34567999999999999887654 489999999999999854211110000000000000001 0 01346789
Q ss_pred HHHHHHHHHhcC
Q 005949 231 VAEAFECILHKG 242 (668)
Q Consensus 231 ~a~ai~~~~~~~ 242 (668)
+|.+++.++..+
T Consensus 250 ~a~~~~~l~~~~ 261 (315)
T PRK06196 250 GAATQVWAATSP 261 (315)
T ss_pred HHHHHHHHhcCC
Confidence 999999888654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-16 Score=153.64 Aligned_cols=195 Identities=11% Similarity=-0.024 Sum_probs=139.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||++++++|+++|++|. .+.+|++|++++.++++.. ++|
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 86 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLD 86 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCc
Confidence 5799999999999999999999998651 2456889988888777643 589
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+|||+|+.. . ....++...+++|+.++.++++++... +.+++++||....... ...+.+
T Consensus 87 ~vi~~ag~~---~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~~~~ 148 (248)
T PRK07806 87 ALVLNASGG---M--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP-------------TVKTMP 148 (248)
T ss_pred EEEECCCCC---C--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc-------------cccCCc
Confidence 999999854 1 123356778899999999999999864 3478888885432110 001112
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhccc-c-----eeecCCCcccHhhHHHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYN-K-----VVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~-~-----~~~~~~~~~~v~D~a~~~~~~ 581 (668)
..+.|+.||..+|.+++.+. ...++++.+++++.+-++. ...+.... + .......+++++|+|+++..+
T Consensus 149 ~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 226 (248)
T PRK07806 149 EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV--TATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARA 226 (248)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch--hhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHH
Confidence 24689999999999998863 2357999999887666653 22221110 0 000123688999999999999
Q ss_pred Hhcc--CCceeeecCCCcc
Q 005949 582 AKRN--LRGIWNFTNPGVV 598 (668)
Q Consensus 582 ~~~~--~~g~~ni~~~~~~ 598 (668)
++.. .+.+|++++++.+
T Consensus 227 ~~~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 227 VTAPVPSGHIEYVGGADYF 245 (248)
T ss_pred hhccccCccEEEecCccce
Confidence 9865 5668999997654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-15 Score=150.21 Aligned_cols=231 Identities=13% Similarity=0.056 Sum_probs=151.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
|..+++|++|||||+|+||+++++.|+++ +++|++++|...... ...+. ....++..+.+|+.|.+.+..++..
T Consensus 1 m~~l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (272)
T PRK08589 1 MKRLENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIAEAVSETVDKIK--SNGGKAKAYHVDISDEQQVKDFASEI 76 (272)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHH--hcCCeEEEEEeecCCHHHHHHHHHHH
Confidence 77778899999999999999999999999 688998888621111 11111 1123588999999999888776642
Q ss_pred ----CCCCEEEEcCccCCcc-c----ccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD-N----SFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~-~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||..... . ..+.....+++|+.++..+.+++... ..-.++|++||...+.+..
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 149 (272)
T PRK08589 77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL------- 149 (272)
T ss_pred HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-------
Confidence 3689999999975321 1 12234567788999887777654431 0126899999976654321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|.+.+.+++.++.++ ++++..+.||.|..+..... ..-..+............ ..
T Consensus 150 -------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 217 (272)
T PRK08589 150 -------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT-----PL 217 (272)
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC-----CC
Confidence 13469999999999999987653 79999999999987643110 000000011100000000 01
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+...+|++++++.++.... .|+.+.+.++.
T Consensus 218 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 218 GRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 125678999999998886432 45666666553
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-15 Score=147.28 Aligned_cols=223 Identities=13% Similarity=0.108 Sum_probs=151.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
++++++|||||+|.||++++++|+++ +++|+++++.........+.. ....+..+.+|+.|.+.+.+++++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVTA--LGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999 688888876432111111111 123578899999999988877743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... ...+++...+++|+.++.++++++... +.-.++|++||...+.+...
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 154 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--------- 154 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC---------
Confidence 3799999999975422 223456678999999999998876542 22358999999877654321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|.+.|.+.+.++.+ .++++..++||.+-.+............+.... .++. ..+..
T Consensus 155 -----~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~ 220 (253)
T PRK08993 155 -----VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGL 220 (253)
T ss_pred -----CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcC
Confidence 236999999999999988765 489999999999987643110000011111111 1111 12567
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.+|++.+++.++.... .|+.+.+.++
T Consensus 221 p~eva~~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 221 PSDLMGPVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 8999999998887532 3555555543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-15 Score=147.94 Aligned_cols=227 Identities=18% Similarity=0.117 Sum_probs=152.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
|..|+++++|||||+|+||++++++|+++ +++|++++|...... ...+. ....++.++.+|+.|.+.+.+++..
T Consensus 1 ~~~~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~ 76 (263)
T PRK08226 1 MGKLTGKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELC--GRGHRCTAVVADVRDPASVAAAIKRA 76 (263)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHH--HhCCceEEEECCCCCHHHHHHHHHHH
Confidence 55667799999999999999999999998 678999888642111 01110 1123577899999999998887643
Q ss_pred ----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||...... ..++..+.++.|+.++..+++++... ....++|++||......
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------- 147 (263)
T PRK08226 77 KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV--------- 147 (263)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc---------
Confidence 36899999999754322 22234457899999999999876532 12468999998543110
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC------CChHHHHHHHHHcCCCceeecC
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP------EKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
.......|+.+|...|.+++.++.++ ++++..++||.+.++.... ......+...+..+.+
T Consensus 148 ----~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------ 217 (263)
T PRK08226 148 ----ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP------ 217 (263)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC------
Confidence 01123569999999999999887654 7999999999998874210 0111122233222211
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
...+...+|+++++..++... ..++.+.+.+|
T Consensus 218 ---~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 218 ---LRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred ---CCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 112457899999998877532 24556666655
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-16 Score=158.18 Aligned_cols=210 Identities=11% Similarity=0.026 Sum_probs=147.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++|+||||+|+||++++++|+++|++| ..+.+|++|++++.+.++.+ ++|+|||
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~ 83 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVN 83 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999864 23467899988888777754 6899999
Q ss_pred cccccCCC-CccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||..... ..+...++....+++|+.++.++++++ ++.+. +++++||...+.+. +.
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------------~~ 145 (275)
T PRK08263 84 NAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF------------------PM 145 (275)
T ss_pred CCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC------------------CC
Confidence 99976211 112234566778899999998888886 44444 67777876655221 12
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh---H--------HHHhhcccceeecCCCc-ccHhhHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---F--------ITKISRYNKVVNIPNSM-TVLDELLP 576 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~--------~~~~~~~~~~~~~~~~~-~~v~D~a~ 576 (668)
.+.|+.+|...+.++..+.. ..++++.+++|+.+..+.. . ...+............+ ...+|+++
T Consensus 146 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~ 225 (275)
T PRK08263 146 SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAE 225 (275)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHH
Confidence 35799999999998877643 3689999999987755421 0 00110000000011234 77999999
Q ss_pred HHHHHHhcc-CCceeeecC-CCccCHHHHHHHHHhhc
Q 005949 577 ISIEMAKRN-LRGIWNFTN-PGVVSHNEILEMYKKYI 611 (668)
Q Consensus 577 ~~~~~~~~~-~~g~~ni~~-~~~~s~~e~~~~i~~~~ 611 (668)
+++.+++++ ..+.|.+++ +..+++.++.+.+.+.-
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (275)
T PRK08263 226 ALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE 262 (275)
T ss_pred HHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence 999999875 444555554 47889999999998863
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-15 Score=148.87 Aligned_cols=205 Identities=20% Similarity=0.098 Sum_probs=141.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc------cC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI------TE 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~ 79 (668)
||++|||||+|+||++++++|+++ +++|++++|... ....+.......++.++.+|+.|.+.+.+++. ..
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEA--GLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH--HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999 678988887542 22221111113468899999999998887764 24
Q ss_pred CCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccc-cCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEV-YGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||...... +.++....+++|+.++.++++++... ....++|++||... |+...
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----------- 145 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG----------- 145 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC-----------
Confidence 6899999999754321 22345678899999999998877431 12478999999644 43322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
...|+.+|...+.+.+.++.+ .++++++++||.+-.+...... .......... ....+..
T Consensus 146 ----~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~-----------~~~~~~~ 208 (260)
T PRK08267 146 ----LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--NEVDAGSTKR-----------LGVRLTP 208 (260)
T ss_pred ----chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc--chhhhhhHhh-----------ccCCCCH
Confidence 346999999999999887654 3799999999998765332100 0000000000 0112467
Q ss_pred HHHHHHHHHHHhcC
Q 005949 229 EDVAEAFECILHKG 242 (668)
Q Consensus 229 ~D~a~ai~~~~~~~ 242 (668)
+|++.+++.+++.+
T Consensus 209 ~~va~~~~~~~~~~ 222 (260)
T PRK08267 209 EDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHHHHhCC
Confidence 89999999998754
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-15 Score=149.21 Aligned_cols=221 Identities=16% Similarity=0.146 Sum_probs=142.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+|+||||||+|+||+.+++.|+++ +++|++..+... ........ .....++.++.+|+.|.+.+.++++.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDA-AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 579999999999999999999998 567766543221 11111110 11123688999999999988776642
Q ss_pred CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHH-HcC-----CCcEEEEEcCccc-cCCCCCCcCCC
Q 005949 79 ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACK-VTG-----QIRRFIHVSTDEV-YGETDEDAVVG 146 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~-~~~-----~~~~~v~~SS~~v-yg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...++....+.+|+.++..+++.+. ... .-.+||++||... ++...
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------ 152 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------ 152 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC------
Confidence 3699999999975321 1222345678999999988875433 221 0236999998654 33221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...+.+++.++++. +++++++|||.+..|........ ......... .++ .
T Consensus 153 --------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~--~~~-----~-- 214 (248)
T PRK06947 153 --------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQ--TPL-----G-- 214 (248)
T ss_pred --------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-HHHHHHhhc--CCC-----C--
Confidence 12359999999999998887654 79999999999998853211111 111111111 111 0
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
....++|++++++.++..+. .|..+.+.++
T Consensus 215 ~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 215 RAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred CCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence 13578999999998887653 4555555543
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.2e-15 Score=149.52 Aligned_cols=221 Identities=16% Similarity=0.116 Sum_probs=149.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++++||||||+|+||.++++.|+++ +++|+++ +|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEA--AQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35679999999999999999999998 6788877 775321 1111000 1133588899999999998777642
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||++|..... ...++....+++|+.++.++++.+... ...++||++||...+....
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-------- 150 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-------- 150 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC--------
Confidence 2799999999976321 122334568899999988888776532 1256899999966544322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...+.+++.++.+ .+++++++|||.+..+.... ..+......... .....+
T Consensus 151 ------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~--~~~~~~~~~~~~---------~~~~~~ 213 (247)
T PRK05565 151 ------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS--FSEEDKEGLAEE---------IPLGRL 213 (247)
T ss_pred ------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc--cChHHHHHHHhc---------CCCCCC
Confidence 1346999999999888877654 38999999999987764421 111111111110 011235
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+|+++++..++.... .++.+++..+
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 214 GKPEEIAKVVLFLASDDASYITGQIITVDGG 244 (247)
T ss_pred CCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence 688999999998886543 4567777654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=150.18 Aligned_cols=221 Identities=15% Similarity=0.133 Sum_probs=150.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++++||||+|+||+++++.|+++ +++|++++|... ..+.+... ....++..+.+|+.|.+.+..++..
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQE--KAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999998 678888888532 11111111 1123578899999999988777642
Q ss_pred -CCCCEEEEcCccCCcc-------------------cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCcc
Q 005949 79 -ESIDTIMHFAAQTHVD-------------------NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDE 134 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~-------------------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~ 134 (668)
.++|+|||+||..... ...+++...+++|+.++..+++.+ ++.+ ..++|++||..
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~ 163 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMN 163 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccch
Confidence 3799999999964321 112345678889999988766544 3333 47899999987
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC-----CChHHHHHHH
Q 005949 135 VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----EKLIPKFILL 206 (668)
Q Consensus 135 vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~ 206 (668)
.+.+.. +...|+.+|.+.+.+++.++.++ ++++.+++||.|.++.... ..........
T Consensus 164 ~~~~~~--------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 229 (278)
T PRK08277 164 AFTPLT--------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANK 229 (278)
T ss_pred hcCCCC--------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHH
Confidence 765432 23469999999999999887764 7999999999999884310 0000111111
Q ss_pred HHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc-CC---CCceEEEcCC
Q 005949 207 AMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK-GE---VGHVYNVGTK 253 (668)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~-~~---~~~~~ni~~~ 253 (668)
..... ....+...+|++++++.++.. .. .|+.+.+.+|
T Consensus 230 ~~~~~---------p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 230 ILAHT---------PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred HhccC---------CccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 11111 112356789999999988875 22 4566777655
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-15 Score=147.04 Aligned_cols=222 Identities=17% Similarity=0.200 Sum_probs=146.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|++|.+|||||+|+||++++++|+++ +++|++..+.........+.. .....++..+.+|+.|.+.+.+++.+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 567776543221111000000 01123577889999999998877642
Q ss_pred -CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... +...+++...+++|+.++..+.+.+. +.+ .+++|++||.....+.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---------- 147 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ---------- 147 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCC----------
Confidence 368999999997542 22334556788999999777665543 333 5799999996432211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
.+...|+.+|.+.+.+.+.++.+ .++++.+++||.+.+|... ...+.+........+ ...+.
T Consensus 148 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~---------~~~~~ 212 (246)
T PRK12938 148 ----FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK--AIRPDVLEKIVATIP---------VRRLG 212 (246)
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh--hcChHHHHHHHhcCC---------ccCCc
Confidence 12457999999999988877654 4899999999999887542 111222222222211 11245
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
..+|+++++..++... ..++.+.+.++
T Consensus 213 ~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 213 SPDEIGSIVAWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred CHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence 7899999999887643 24566776644
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-15 Score=147.55 Aligned_cols=224 Identities=13% Similarity=0.110 Sum_probs=147.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||+++++.|+++ +++|++..+... ........ ......+..+.+|+.+.+.+..++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRK-EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCH-HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 677777543211 11111100 01123467889999998876654421
Q ss_pred --------CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 --------ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 --------~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...++....+++|+.++..+++++... ....++|++||...+....
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 153 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP----- 153 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC-----
Confidence 2699999999974322 122234567789999999999876543 1235999999987654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHH-HHHHHHHcCCCceeecCCCc
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP-KFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 221 (668)
....|+.+|...+.+++.++.++ ++++..+.||.|.++.... ... .......... ..
T Consensus 154 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~--------~~ 214 (252)
T PRK12747 154 ---------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE--LLSDPMMKQYATTI--------SA 214 (252)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh--cccCHHHHHHHHhc--------Cc
Confidence 23569999999999999877653 8999999999998875311 100 0111111100 01
Q ss_pred eEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...+.+.+|+++++..++.... .|..+.+.+|.
T Consensus 215 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 215 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred ccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence 1246789999999998876432 35667776553
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.5e-15 Score=147.97 Aligned_cols=222 Identities=14% Similarity=0.097 Sum_probs=150.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|+++||||||+|+||++++++|+++ +++|+++.+.... ....+... ....++.++.+|+.|.+.+..++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEE-GAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR 77 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChH-HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3579999999999999999999999 6788777553221 11111110 1134688999999999988776642
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...++....+.+|+.++.++++++... +.-+++|++||.....
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------ 145 (256)
T PRK12743 78 LGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------ 145 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------
Confidence 3689999999975432 122345678899999999999877642 1135899999964321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+..+...|+.+|...+.+++.++.+ .+++++.++||.+.++...... .......... .++ ..+.
T Consensus 146 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~--~~~-------~~~~ 212 (256)
T PRK12743 146 --PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--SDVKPDSRPG--IPL-------GRPG 212 (256)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--hHHHHHHHhc--CCC-------CCCC
Confidence 1223457999999999999887764 3799999999999988542111 1111111111 111 1234
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 227 YCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+.+|+++++..++.... .|..+.+.++.
T Consensus 213 ~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 213 DTHEIASLVAWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 78999999988886532 46677777654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=148.22 Aligned_cols=223 Identities=17% Similarity=0.121 Sum_probs=151.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||.++++.|+++ +++|++.+|... ..+.+... ....++..+.+|+.|.+.+.+++..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLD--ALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 678888887532 12111111 1124578899999999998877642
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||...... ..++....+++|+.++..+++++... +.-.++|++||....-...
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 154 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV-------- 154 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--------
Confidence 37999999999754321 22344567789999999999877532 2124799998865321110
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
......|+.+|.+.+.+++.++.++ |+++..++||.|-.+.... . +.......... ++ ..+
T Consensus 155 ----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~--~-~~~~~~~~~~~--~~-------~r~ 218 (253)
T PRK05867 155 ----PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP--Y-TEYQPLWEPKI--PL-------GRL 218 (253)
T ss_pred ----CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc--c-hHHHHHHHhcC--CC-------CCC
Confidence 0113469999999999999987653 8999999999997774321 1 11212221111 11 135
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...+|+|++++.++.... .|+.+.+.+|.
T Consensus 219 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 219 GRPEELAGLYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred cCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence 678999999998886432 46677777653
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=149.20 Aligned_cols=226 Identities=14% Similarity=0.057 Sum_probs=152.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc----CCCCeEEEEccCCCHHHHHHHhc
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK----ASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
..+++|+||||||+|+||+++++.|+++ +++|++++|... ..+...... ...++.++.+|++|.+.+.+++.
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 78 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAA--LAERAAAAIARDVAGARVLAVPADVTDAASVAAAVA 78 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHH
Confidence 4456789999999999999999999999 678988888532 111111110 23457889999999998887774
Q ss_pred c-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCC
Q 005949 78 T-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
. .++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 153 (260)
T PRK07063 79 AAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP----- 153 (260)
T ss_pred HHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC-----
Confidence 2 3799999999964321 223445678899999998888876431 1246899999976543321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecC
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 218 (668)
+...|+.+|.+.+.+.+.++.++ ++++..++||.+-.+..... .-........... .+
T Consensus 154 ---------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~---- 218 (260)
T PRK07063 154 ---------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLAL--QP---- 218 (260)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhc--CC----
Confidence 23469999999999999987654 79999999999876642100 0000011111111 11
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...+...+|++.+++.++.... .|+.+.+.+|.
T Consensus 219 ---~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 219 ---MKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred ---CCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence 1124578999999998886532 45666766554
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=147.68 Aligned_cols=222 Identities=23% Similarity=0.208 Sum_probs=150.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++||||||+|+||++++++|+++ +++++++.+.... ....+.. .....++.++.+|+.|.+.+.++++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAA-AADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999 5677766654321 1111100 01134688999999999998887753
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+||..... ...++....++.|+.++.++++++.+. ....++|++||...+.+.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------- 147 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL------------- 147 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-------------
Confidence 3799999999975421 122345567889999999999877653 123589999986554322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
.+...|+.+|...+.+++.++.++ ++++++++||.+-.+..... ..+.......+..+. ..+.+++
T Consensus 148 -~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~ 216 (245)
T PRK12937 148 -PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-KSAEQIDQLAGLAPL---------ERLGTPE 216 (245)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-CCHHHHHHHHhcCCC---------CCCCCHH
Confidence 124579999999999999876553 78999999998877642111 111222222222211 1245789
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 230 DVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 230 D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
|+++++..++..+. .+..+++.++
T Consensus 217 d~a~~~~~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 217 EIAAAVAFLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHHHHHHcCccccCccccEEEeCCC
Confidence 99999988886542 3667777654
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-15 Score=149.87 Aligned_cols=206 Identities=20% Similarity=0.138 Sum_probs=140.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc------C
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT------E 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 79 (668)
+++||||||+|+||.++++.|+++ +++|++++|... ..+.+. ..+++.+.+|+.|.+.+..++.. .
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~--~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPD--DVARMN----SLGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HhHHHH----hCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999998 578888887542 111111 12578899999999887665532 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHH----HHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVL----LEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.+|++||+||..... ...++....++.|+.|+.++ ++.+++.+ .+++|++||...+.+.
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------------ 140 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIST------------ 140 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCC------------
Confidence 579999999964321 12233457889999998876 55556554 6799999996443221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHH---HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC-CceeecCCCceEecee
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYG---RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGL-PLPIHGDGSNVRSYLY 227 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 227 (668)
.....|+.+|...|.+.+.++ ...+++++++|||.+..+.. ..+.... .......+...+.+++
T Consensus 141 --~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 208 (256)
T PRK08017 141 --PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT----------DNVNQTQSDKPVENPGIAARFTLG 208 (256)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh----------hcccchhhccchhhhHHHhhcCCC
Confidence 124579999999999877643 34589999999987754421 1111100 1111122333456799
Q ss_pred HHHHHHHHHHHHhcCCC
Q 005949 228 CEDVAEAFECILHKGEV 244 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~~ 244 (668)
++|+++++..+++++..
T Consensus 209 ~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 209 PEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999987754
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=148.01 Aligned_cols=223 Identities=19% Similarity=0.153 Sum_probs=151.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... ...... .....++..+.+|+.|.+.+.+++..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAG--GEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999998 6789888886421 111110 11134688999999999988877643
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....+++...+++|+.++..+++++. +.+ ..++|++||...+.+..
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~------- 152 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAP------- 152 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCC-------
Confidence 368999999997432 12334556788899999987766433 323 47899999987765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceE
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|.+.+.+++.++.++ ++++.++.||.|-.+..... ...+..........+ . .
T Consensus 153 -------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~ 216 (253)
T PRK06172 153 -------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP--V-------G 216 (253)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC--C-------C
Confidence 24569999999999999987764 79999999999876643110 000111111111111 1 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+...+|+++.+..++... ..|+.+++.+|.
T Consensus 217 ~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 217 RIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred CccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 2457899999999888643 246677777654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.2e-16 Score=153.65 Aligned_cols=195 Identities=11% Similarity=0.065 Sum_probs=136.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|+++|++| .++.+|++|.++++++++.. ++|+
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 87 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDI 87 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999864 23568999999888877753 4799
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhh----hHHHHHHH-HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAG----TLTLADVC-RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~----~~~ll~~~-~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||....... ..........+++|+.+ +.++++++ ++.+. +++++||...+.
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~------------------ 149 (262)
T PRK13394 88 LVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE------------------ 149 (262)
T ss_pred EEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC------------------
Confidence 9999997621111 11233455677899999 66677777 55555 667777753321
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHHHhhcccc------------eeecCCCccc
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK------------VVNIPNSMTV 570 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~------------~~~~~~~~~~ 570 (668)
+.++.+.|+.+|...+.+++.+.+ ..++++.+++|+.+++|. ..+........ ......++++
T Consensus 150 ~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (262)
T PRK13394 150 ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTT 229 (262)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCC
Confidence 112346899999999998887643 257999999999999884 11111111000 0011247999
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
++|++++++.++... .+..|++.++.
T Consensus 230 ~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 230 VEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred HHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 999999999999754 25678888764
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-15 Score=148.08 Aligned_cols=207 Identities=15% Similarity=0.081 Sum_probs=141.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|+||||||+|+||++++++|+++ +++|++.+|... ..+.... .....++.++.+|+.|.+.+.+++.. .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEE--GGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999998 678888887532 1111111 01134678899999999988877642 3
Q ss_pred CCCEEEEcCccCCccccc----CChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||........ ++....+++|+.++.++.+. +++.+ ..++|++||...+.+..
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~----------- 144 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGP----------- 144 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCC-----------
Confidence 699999999975432212 23345678998887776655 44544 67999999976654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCC-hHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|.+.+.+.+.++.+. ++++++++|+.+.++...... ..+........ .....+++
T Consensus 145 ---~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 211 (270)
T PRK05650 145 ---AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK----------LLEKSPIT 211 (270)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH----------HhhcCCCC
Confidence 24579999999999888877653 899999999999887542110 01111111000 00113478
Q ss_pred HHHHHHHHHHHHhcC
Q 005949 228 CEDVAEAFECILHKG 242 (668)
Q Consensus 228 v~D~a~ai~~~~~~~ 242 (668)
++|+|++++.+++++
T Consensus 212 ~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 212 AADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999864
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2e-15 Score=150.23 Aligned_cols=200 Identities=18% Similarity=0.046 Sum_probs=140.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++++||||||+|.||++++++|+++ +++|++.+|... .+..+... ..++.++.+|++|++++.+++..
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDEA--LAKETAAE--LGLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH--hccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999998 678888887532 11111111 11477899999999988766632
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||...... ..++....+++|+.++.++++.+. +.+ ..++|++||...+....
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 145 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVP---------- 145 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCC----------
Confidence 46899999999754322 222345678999998888776654 333 57999999976543321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...+.+.+.++.+ .++++++++|+.+-.+... +.. +.....++.
T Consensus 146 ----~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~--------------~~~------~~~~~~~~~ 201 (273)
T PRK07825 146 ----GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA--------------GTG------GAKGFKNVE 201 (273)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc--------------ccc------cccCCCCCC
Confidence 2456999999888877776543 4899999999987654221 000 001124688
Q ss_pred HHHHHHHHHHHHhcCCC
Q 005949 228 CEDVAEAFECILHKGEV 244 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~~ 244 (668)
.+|+|++++.++.++..
T Consensus 202 ~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 202 PEDVAAAIVGTVAKPRP 218 (273)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 99999999999987543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.2e-15 Score=147.17 Aligned_cols=221 Identities=16% Similarity=0.191 Sum_probs=148.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++++||||||+|+||+++++.|+++ +++|++..+... .....+... ...++.++.+|+.|.+.+.+++.. .
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 79 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSE-DAAEALADE-LGDRAIALQADVTDREQVQAMFATATEHFG 79 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCH-HHHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4579999999999999999999998 677876544321 111111111 124678899999999988877743 1
Q ss_pred -CCCEEEEcCccCC----------cccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCC
Q 005949 80 -SIDTIMHFAAQTH----------VDNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 80 -~~d~Vih~a~~~~----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
++|+|||+||... ...++++....+++|+.++.++++++... ....++|++||.....
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------- 151 (253)
T PRK08642 80 KPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-------- 151 (253)
T ss_pred CCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC--------
Confidence 3999999998531 11123344568999999999999888531 2247899999854321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+..+.+.|+.+|.+.|.+++.++++ .++++..++||.+..+.... ...+......... .++
T Consensus 152 ------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~-~~~~~~~~~~~~~--~~~------- 215 (253)
T PRK08642 152 ------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA-ATPDEVFDLIAAT--TPL------- 215 (253)
T ss_pred ------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc-cCCHHHHHHHHhc--CCc-------
Confidence 1223557999999999999998776 37999999999987653211 1111222222111 111
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
..+.+.+|+++++..++... ..|+.+.+.++
T Consensus 216 ~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 216 RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 23678999999999888643 24667777655
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=136.00 Aligned_cols=213 Identities=18% Similarity=0.100 Sum_probs=151.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
|.+.++|.++|||||+.||.++++.|.+. |++|++..|+. ..++.+..+.....+.....|++|.+++..++.
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~--drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEA--GAKVVLAARRE--ERLEALADEIGAGAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccH--HHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHH
Confidence 67777889999999999999999999999 78999999975 345555444333468899999999998666553
Q ss_pred -c-CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 78 -T-ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 78 -~-~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
+ .++|++||.||..... ...+++..++++|+.|..+..++.- +.+ ...+|.+||.+..-..
T Consensus 77 ~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y-------- 147 (246)
T COG4221 77 EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPY-------- 147 (246)
T ss_pred HhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccC--------
Confidence 2 4699999999976532 2334567899999999888877653 323 4699999996632111
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI--PKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
...+.|+.+|.+...+....+.+. +++++.+-||.|-...-..-++- ..-..... ..
T Consensus 148 ------~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~ 209 (246)
T COG4221 148 ------PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KG 209 (246)
T ss_pred ------CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------cc
Confidence 124569999999999998876553 79999999998854321100000 00000000 11
Q ss_pred EeceeHHHHHHHHHHHHhcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
...+..+|+|+++.++++.|..
T Consensus 210 ~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 210 GTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred CCCCCHHHHHHHHHHHHhCCCc
Confidence 2467899999999999998753
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=150.56 Aligned_cols=221 Identities=18% Similarity=0.182 Sum_probs=147.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++||||||+|+||++++++|+++ +++|++++|.... ...... .....++.++.+|++|.+++.++++.
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEK--VDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999999998 6789998886421 111110 01123567889999999988877643
Q ss_pred -CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||.... +...++..+.+++|+.++.++++++... ..-.++|++||...+...
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~------------ 151 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM------------ 151 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC------------
Confidence 368999999985321 2223345567889999999999877642 112599999997554221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH--HHHHHHHcCCCceeecCCCceEece
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP--KFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
.....|+.+|...|.+++.++.+ .+++++.++|+.+.+..... ...+ .+...... ..+ ...+.
T Consensus 152 --~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~-~~~~~~~~~~~~~~--~~~-------~~~~~ 219 (264)
T PRK07576 152 --PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA-RLAPSPELQAAVAQ--SVP-------LKRNG 219 (264)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh-hcccCHHHHHHHHh--cCC-------CCCCC
Confidence 12456999999999999987654 37999999999887532110 0000 01111111 111 12356
Q ss_pred eHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 227 YCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+|++++++.++..+. .+..+.+.++
T Consensus 220 ~~~dva~~~~~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 220 TKQDIANAALFLASDMASYITGVVLPVDGG 249 (264)
T ss_pred CHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence 78999999999887532 3455555554
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.8e-16 Score=151.72 Aligned_cols=198 Identities=19% Similarity=0.140 Sum_probs=142.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|+|||
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 86 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFN 86 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999864 34678999999888887764 6899999
Q ss_pred cccccCC-CCccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 438 ~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+||.... |..+...++....+++|+.++.++++++... +.+++++||..... +.+
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~ 148 (257)
T PRK07067 87 NAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------------GEA 148 (257)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------------CCC
Confidence 9997621 1112233456677899999999999999653 24677887753221 112
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H---HHHhhcc---cce-----eecCCCcccHhhH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F---ITKISRY---NKV-----VNIPNSMTVLDEL 574 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~---~~~~~~~---~~~-----~~~~~~~~~v~D~ 574 (668)
+.+.|+.||...+.+++.+.. ..++++..++|+.++++.. + +...... ... ......+.+.+|+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 228 (257)
T PRK07067 149 LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDL 228 (257)
T ss_pred CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHH
Confidence 447899999999998877632 4689999999999998741 1 1100000 000 0112367889999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
|+++..++... .+.+||+.+++.+|
T Consensus 229 a~~~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 229 TGMALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HHHHHHHhCcccccccCcEEeecCCEeCC
Confidence 99999999754 46799999886654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=154.06 Aligned_cols=189 Identities=13% Similarity=0.047 Sum_probs=128.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+.+++++||||||+|+||+++++.|+++ +++|++++|...... ...+.......++.++.+|+.|.+++.+++.+
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 89 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL 89 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 3455789999999999999999999999 678888887532111 11111111124688899999999998877642
Q ss_pred ----CCCCEEEEcCccCCcc--cccCChHHHHHHHHHH----HHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYG----THVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...++....+.+|+.+ +..+++.+++.+ .+++|++||...+...... ..+..
T Consensus 90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~-~~~~~ 167 (306)
T PRK06197 90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIH-FDDLQ 167 (306)
T ss_pred HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCC-ccccC
Confidence 3699999999975432 2234456788999999 666777776654 5799999997654311111 11111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEE--EeeCceeCCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVIT--TRGNNVYGPNQ 194 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i--lR~~~v~G~~~ 194 (668)
+..+..+...|+.+|.+.+.+.+.++.+. ++++.+ +.||.|..+..
T Consensus 168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 12233456789999999999999887654 566554 47998877643
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.4e-15 Score=145.83 Aligned_cols=221 Identities=17% Similarity=0.149 Sum_probs=150.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.++++|||||+|+||.+++++|+++ +++|++++|... .+...... ....++.++.+|++|.+++.+++.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQE--LVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHH--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4589999999999999999999998 678888877542 11111111 1123688899999999998887743
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCcc-ccCCCCCCcCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDE-VYGETDEDAVVGNH 148 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...++....+++|+.++..+.+.+.. .+ ..++|++||.. .++..
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 154 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRE--------- 154 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCC---------
Confidence 3589999999975432 23344567788999999888776643 23 57999999953 33221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh------HHHHHHHHHcCCCceeecCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL------IPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 219 (668)
+...|+.+|...+.+++.++++. ++++..++||.+.++...+... ...+...+....+
T Consensus 155 ------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 221 (265)
T PRK07097 155 ------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------- 221 (265)
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC-------
Confidence 24569999999999999988764 8999999999999875321100 0011111111111
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+...+|++.++..++... ..++.+.+.++.
T Consensus 222 --~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 222 --AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred --ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 113557889999999988753 245666666553
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.2e-15 Score=146.26 Aligned_cols=166 Identities=14% Similarity=0.151 Sum_probs=123.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 80 (668)
||++|||||+|+||++++++|+++ +++|++++|... ....+. ..++.++.+|+.|.+.+.+++.. .+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAE--DVEALA----AAGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHH----HCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999998 688998888542 111111 12467889999999988777642 36
Q ss_pred CCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 81 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|+|||+||..... ...++....+++|+.++.++++++... ....++|++||...+....
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 138 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP-------------- 138 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC--------------
Confidence 89999999975422 123345578899999999988876431 1136899999865432211
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 193 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 193 (668)
....|+.+|...+.+.+.++.+ +|+++++++||.|.++.
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 2456999999999998877654 58999999999998763
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.4e-15 Score=145.20 Aligned_cols=222 Identities=15% Similarity=0.145 Sum_probs=148.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+|++|||||+|+||+++++.|+++ +++|++.+|... ....+... ....++.++.+|++|++.+.+++..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKE--KLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 478999999999999999999998 678988887642 11111110 1124688999999999998877643
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ..+.+++...+++|+.++.++++++.. .+...++|++||...+....
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 146 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP---------- 146 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC----------
Confidence 368999999985432 222334567899999999999988843 12236899999875432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCC-hHHHHHHHHHcCCCceeecCCCceEec
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEK-LIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...+.+.+.++.+ +|+++..++||.+.++...... ..+...+.+.+..+ + ..+
T Consensus 147 ----~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~ 213 (252)
T PRK07677 147 ----GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP--L-------GRL 213 (252)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC--C-------CCC
Confidence 1346999999999999986654 4799999999999864321110 01222222222111 1 125
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+|+++++..++... ..|+.+.+.++.
T Consensus 214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred CCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence 67889999988887643 245666666553
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.8e-15 Score=145.28 Aligned_cols=220 Identities=19% Similarity=0.153 Sum_probs=145.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
..|++++||||||+|+||.+++++|+++ +++|++++|.... ....... ....++.+|+.|.+.+.+++..
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~--~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEA--GKAAADE---VGGLFVPTDVTDEDAVNALFDTAAE 75 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHH---cCCcEEEeeCCCHHHHHHHHHHHHH
Confidence 3466789999999999999999999998 6888888875321 1111111 1225789999999998887743
Q ss_pred --CCCCEEEEcCccCCcc------cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCc-cccCCCCCCcCC
Q 005949 79 --ESIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTD-EVYGETDEDAVV 145 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~-~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...+.....++.|+.++..+++.+. +.+ ..++|++||. ++++...
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~----- 149 (255)
T PRK06057 76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSAT----- 149 (255)
T ss_pred HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCC-----
Confidence 3689999999975321 1122355788899999988777653 333 4689999885 4554321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceeecCCC
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|...+.+.+.++.+ .++++++++||.+.+|..... .......+.. . .++
T Consensus 150 ---------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~--~~~------ 211 (255)
T PRK06057 150 ---------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRL-V--HVP------ 211 (255)
T ss_pred ---------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH-h--cCC------
Confidence 1346999998887777765432 389999999999998754211 0001111110 0 111
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+..++|+++++..++.... .+..+.+.++
T Consensus 212 -~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 212 -MGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred -CCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 1146889999999987775432 3556666654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-15 Score=151.78 Aligned_cols=215 Identities=19% Similarity=0.104 Sum_probs=145.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++++||||||+|+||+++++.|+++ +++|++++|... .++.+... ....++.++.+|++|.+++.+++..
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~--~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEE--GLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 678888888532 11111111 1134678899999999998877642
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHH----HHHHHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLL----EACKVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||..... ...++....+++|+.++.++. +.+++.+ ..+||++||...|....
T Consensus 81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~------- 152 (334)
T PRK07109 81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIP------- 152 (334)
T ss_pred HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCC-------
Confidence 3699999999964321 122334567788877766644 4444433 57899999988775432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|...+.+.+.++.+ .++.+++++||.+.+|... .. ........ ...
T Consensus 153 -------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~------~~-~~~~~~~~-------~~~ 211 (334)
T PRK07109 153 -------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD------WA-RSRLPVEP-------QPV 211 (334)
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh------hh-hhhccccc-------cCC
Confidence 2356999999999988876644 2689999999998776321 11 11011100 011
Q ss_pred EeceeHHHHHHHHHHHHhcCCCCceEEEcC
Q 005949 223 RSYLYCEDVAEAFECILHKGEVGHVYNVGT 252 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~ 252 (668)
..+...+|+|++++.+++++ ...+.++.
T Consensus 212 ~~~~~pe~vA~~i~~~~~~~--~~~~~vg~ 239 (334)
T PRK07109 212 PPIYQPEVVADAILYAAEHP--RRELWVGG 239 (334)
T ss_pred CCCCCHHHHHHHHHHHHhCC--CcEEEeCc
Confidence 23567999999999999875 34566653
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=149.98 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=139.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
.++|+||||+|+||.+++++|+++|++| .++.+|++|.+++.+.+++. ++|
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 85 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLD 85 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999854 34567899999888888754 689
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+++....... .....++...++.|+.++.++++++. +.+. +++++||...+..
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------------- 148 (251)
T PRK12826 86 ILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------------- 148 (251)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc-----------------
Confidence 99999987621000 22334556778899999999999884 3344 6777777654410
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHH----HhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FIT----KISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~----~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+.+..+.|+.+|..+|.++..+.. ..++++.+++|+++++|.. ... ...... .. ...+++++|+|+++
T Consensus 149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~dva~~~ 225 (251)
T PRK12826 149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAA--IP-LGRLGEPEDIAAAV 225 (251)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhc--CC-CCCCcCHHHHHHHH
Confidence 112336799999999999988643 3589999999999999852 111 111110 01 12578899999999
Q ss_pred HHHHhcc----CCceeeecCCC
Q 005949 579 IEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~ 596 (668)
..++.+. .+++|++.++.
T Consensus 226 ~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 226 LFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred HHHhCccccCcCCcEEEECCCc
Confidence 9988653 36788887754
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.9e-15 Score=146.83 Aligned_cols=227 Identities=12% Similarity=0.025 Sum_probs=146.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC---CCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI---PSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++|+||||||+++||+++++.|+++ +++|+++.+... .....+. ......++.++.+|++|++.+.+++.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 79 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNV-EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFK 79 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCH-HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 34567799999999999999999999999 677877755322 1111111 01113467899999999999887774
Q ss_pred c-----CCCCEEEEcCccCCc----------ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCC
Q 005949 78 T-----ESIDTIMHFAAQTHV----------DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGE 138 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~ 138 (668)
. .++|++||+||.... .....+....++.|+.+...+.+.+. +.+ ..++|++||...+..
T Consensus 80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~ 158 (260)
T PRK08416 80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY 158 (260)
T ss_pred HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC
Confidence 3 368999999985321 11122344577788877666554443 322 468999999643211
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCcee
Q 005949 139 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI 215 (668)
Q Consensus 139 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 215 (668)
. .....|+.+|.+.+.+++.++.++ ++++..+.||.+-.+......-...+........+ +
T Consensus 159 ~--------------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~ 222 (260)
T PRK08416 159 I--------------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP--L 222 (260)
T ss_pred C--------------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC--C
Confidence 1 113469999999999999988764 89999999998866532110000111111111111 1
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+...+|++.+++.++... ..++.+.+.++.
T Consensus 223 -------~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~ 257 (260)
T PRK08416 223 -------NRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT 257 (260)
T ss_pred -------CCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence 12567899999999888653 246667776553
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.9e-15 Score=144.18 Aligned_cols=218 Identities=16% Similarity=0.113 Sum_probs=151.9
Q ss_pred EEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhccC-CCCEEEEc
Q 005949 10 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLITE-SIDTIMHF 87 (668)
Q Consensus 10 LVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~Vih~ 87 (668)
|||||+|+||++++++|+++ +++|++++|... ....+.... ...+++++.+|++|.+.+.+++... ++|++||+
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRD--RLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 69999999999999999998 678888888532 111111100 1346888999999999999988543 58999999
Q ss_pred CccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 88 AAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 88 a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
+|..... ...++....+++|+.++.+++++.... ..+++|++||...|.... +...|+.+|
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~--------------~~~~Y~~sK 141 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSA--------------SGVLQGAIN 141 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCC--------------cchHHHHHH
Confidence 9975422 123445678899999999999966543 368999999987765432 245799999
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 164 AGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 164 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
.+.+.+++.++.+. +++++.++|+.+-.+.... ......+........ +. ..+...+|+++++..++.
T Consensus 142 ~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~dva~~~~~l~~ 212 (230)
T PRK07041 142 AALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERL--PA-------RRVGQPEDVANAILFLAA 212 (230)
T ss_pred HHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHhc
Confidence 99999999987664 6888889999876653210 000011111111111 11 123467999999999887
Q ss_pred cCC-CCceEEEcCCCc
Q 005949 241 KGE-VGHVYNVGTKKE 255 (668)
Q Consensus 241 ~~~-~~~~~ni~~~~~ 255 (668)
... .++.|++.+|.+
T Consensus 213 ~~~~~G~~~~v~gg~~ 228 (230)
T PRK07041 213 NGFTTGSTVLVDGGHA 228 (230)
T ss_pred CCCcCCcEEEeCCCee
Confidence 653 477899987754
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=149.44 Aligned_cols=191 Identities=15% Similarity=0.188 Sum_probs=138.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.+++++|+++|++| ..+..|++|.+++.++++.. ++|+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 86 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY 86 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999854 24568899988887776653 5899
Q ss_pred EEEcccccCC----CCccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR----PNVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 435 Vih~a~~~~~----~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|||+||.... +..+.........+++|+.++.++++++... +.+++++||..+|.
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------- 150 (250)
T PRK07774 87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---------------- 150 (250)
T ss_pred EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC----------------
Confidence 9999997521 0112223445567889999999999998764 23788888876651
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
+.+.|+.||...|.+++.+.+ ..++++..++|+.+..+.. +...+.+..+ ..-+...+|+|
T Consensus 151 -----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a 221 (250)
T PRK07774 151 -----YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIP----LSRMGTPEDLV 221 (250)
T ss_pred -----CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCC----CCCCcCHHHHH
Confidence 236799999999999888743 2479999999987766641 1122222111 11245689999
Q ss_pred HHHHHHHhcc----CCceeeecCCCccC
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++++.++... .+++||+.+++.++
T Consensus 222 ~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 222 GMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 9999998753 45689999886543
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=152.02 Aligned_cols=210 Identities=14% Similarity=0.107 Sum_probs=149.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|++++.++++.. ++
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 87 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL 87 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999998641 2346899988888887754 68
Q ss_pred CEEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 433 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|+|||+||.... +......++....+++|+.++.++++++.+. + .+++++||..++..
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------- 152 (276)
T PRK05875 88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT--------------- 152 (276)
T ss_pred CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC---------------
Confidence 999999995411 1111223345667889999999999887653 2 36777788665411
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccce-----ee-cCCCcccHhhHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKV-----VN-IPNSMTVLDELLP 576 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~-----~~-~~~~~~~v~D~a~ 576 (668)
.++.+.|+.+|...|.+++.+.+ ..++++..++|+.+.++.. ......+.. .. ....+.+++|+|+
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 227 (276)
T PRK05875 153 ---HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV--APITESPELSADYRACTPLPRVGEVEDVAN 227 (276)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccc--cccccCHHHHHHHHcCCCCCCCcCHHHHHH
Confidence 12347899999999999988743 3479999999998876531 111110000 00 1123567999999
Q ss_pred HHHHHHhcc----CCceeeecCCCcc----CHHHHHHHHHhhcCC
Q 005949 577 ISIEMAKRN----LRGIWNFTNPGVV----SHNEILEMYKKYINP 613 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~~~----s~~e~~~~i~~~~g~ 613 (668)
+++.++..+ .+.+||++++..+ +..|+++.+.+..+.
T Consensus 228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 999999864 2578999998876 888888887766543
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.6e-15 Score=143.81 Aligned_cols=220 Identities=16% Similarity=0.125 Sum_probs=149.0
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCccCCc-------cc--cCC--CcCCCCeEEEEccCCCHH
Q 005949 4 YTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYCSNL-------KN--LIP--SKASSNFKFVKGDIASAD 70 (668)
Q Consensus 4 ~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-------~~--~~~--~~~~~~~~~~~~Dl~d~~ 70 (668)
+++++||||||+| .||.+++++|+++ +++|++++|...+... .. +.. .....+++++.+|++|.+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 80 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY 80 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 3568999999996 6999999999998 6788888876221100 00 000 011235889999999999
Q ss_pred HHHHHhcc-----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCC
Q 005949 71 LVNFLLIT-----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGE 138 (668)
Q Consensus 71 ~~~~~~~~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~ 138 (668)
++..++.. .++|+|||+||...... ..+++...+++|+.++..+++++... ...+++|++||...+++
T Consensus 81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 88776642 36899999999754322 22334567899999999999887542 12468999999876554
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCcee
Q 005949 139 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI 215 (668)
Q Consensus 139 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 215 (668)
.. +...|+.+|.+.|.+++.++.+ .+++++.++||.+..+.... .+........+
T Consensus 161 ~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~--- 218 (256)
T PRK12748 161 MP--------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFP--- 218 (256)
T ss_pred CC--------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCC---
Confidence 32 2356999999999999887654 38999999999887653311 11111111110
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
. ..+...+|+++++..++... ..++.+++.++
T Consensus 219 -~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 219 -Q-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred -C-----CCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 0 12345789999998877643 24677888755
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=150.38 Aligned_cols=197 Identities=12% Similarity=0.038 Sum_probs=138.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|+++++++.++++.+ ++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999743 34568899988888777755 689
Q ss_pred EEEEcccccCCCC---ccccccccccceehhhhhhHHHHHHHHHc-----C-----C-cEEEEecceeEeecCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN---VDWCESHKTDTIRTNVAGTLTLADVCRDH-----G-----I-LMMNYATGCIFEYDAAHPEGSG 499 (668)
Q Consensus 434 ~Vih~a~~~~~~~---~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~-----~-~~v~~sS~~vy~~~~~~p~~~~ 499 (668)
+|||+||...... ...........+++|+.++.++++++.+. + . +++++||...+.+
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 153 (256)
T PRK12745 83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV--------- 153 (256)
T ss_pred EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC---------
Confidence 9999999752100 01123455667899999999999998653 1 2 4777787655421
Q ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhccc-ceeecCCCcccHhh
Q 005949 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYN-KVVNIPNSMTVLDE 573 (668)
Q Consensus 500 ~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~-~~~~~~~~~~~v~D 573 (668)
..+.+.|+.+|.+.|.+++.+.. .+++++..++|+.+.++.. +.....+.- ........+.+.+|
T Consensus 154 ---------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 224 (256)
T PRK12745 154 ---------SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPED 224 (256)
T ss_pred ---------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHH
Confidence 12336899999999999888753 3689999999999988742 111111100 00011124668999
Q ss_pred HHHHHHHHHhcc----CCceeeecCCCcc
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
+++++..++... .+..|++.++..+
T Consensus 225 ~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 225 VARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred HHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 999999988643 3568999887543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-15 Score=149.75 Aligned_cols=197 Identities=14% Similarity=0.082 Sum_probs=139.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||++++++|+++|+++. .+..|+++++++.++++.. ++|
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 86 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVAD 86 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999998642 2447888888877776653 679
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
+|||+||...... ...........+++|+.++.++++++.+. ..+++++||...|. +.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~ 148 (252)
T PRK06077 87 ILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR------------------PA 148 (252)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC------------------CC
Confidence 9999999751101 01112223466889999999999998754 23678888866552 22
Q ss_pred CCCCcchhhHHHHHHHHHhccCee--EeEEeeeecCCCCChhh-HHHHhhcc-----cceeecCCCcccHhhHHHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN-FITKISRY-----NKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~-~~~~~~~~-----~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
++.+.|+.+|...|.+++.+.+.. ++++..++|+.+.++.. ........ .........+++++|+|++++.+
T Consensus 149 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~ 228 (252)
T PRK06077 149 YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAI 228 (252)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHH
Confidence 345789999999999998874432 68899999988877642 11111100 00112234789999999999999
Q ss_pred Hhcc--CCceeeecCCCcc
Q 005949 582 AKRN--LRGIWNFTNPGVV 598 (668)
Q Consensus 582 ~~~~--~~g~~ni~~~~~~ 598 (668)
++.. .+++||+.++..+
T Consensus 229 ~~~~~~~g~~~~i~~g~~~ 247 (252)
T PRK06077 229 LKIESITGQVFVLDSGESL 247 (252)
T ss_pred hCccccCCCeEEecCCeec
Confidence 9754 4679999998543
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-15 Score=147.06 Aligned_cols=225 Identities=16% Similarity=0.099 Sum_probs=151.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..++++++|||||+|+||++++++|+++ +++|++++|... ..+.+... ...++.++.+|+.|.+.+.+++..
T Consensus 1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (263)
T PRK06200 1 MGWLHGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAE--KLASLRQR-FGDHVLVVEGDVTSYADNQRAVDQTV 75 (263)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCcceEEEccCCCHHHHHHHHHHHH
Confidence 55667799999999999999999999998 678988888542 12211111 123578899999999988777642
Q ss_pred ---CCCCEEEEcCccCCcc-----cccCC----hHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcC
Q 005949 79 ---ESIDTIMHFAAQTHVD-----NSFGN----SFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~-----~~~~~----~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|++||+||..... ...++ +...+++|+.++..+++++... ..-.++|++||...+.+..
T Consensus 76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 151 (263)
T PRK06200 76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG---- 151 (263)
T ss_pred HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----
Confidence 3699999999974321 11111 3456789999988888777532 1125899999977654322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCC---------hHHHHHHHHHcCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEK---------LIPKFILLAMRGLPL 213 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~---------~~~~~~~~~~~~~~~ 213 (668)
+...|+.+|.+.+.+++.++.+. ++++..+.||.+..+...... ..+......... .
T Consensus 152 ----------~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 219 (263)
T PRK06200 152 ----------GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--T 219 (263)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--C
Confidence 13469999999999999987754 589999999999776421100 001111111111 1
Q ss_pred eeecCCCceEeceeHHHHHHHHHHHHhcC-C---CCceEEEcCC
Q 005949 214 PIHGDGSNVRSYLYCEDVAEAFECILHKG-E---VGHVYNVGTK 253 (668)
Q Consensus 214 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~-~---~~~~~ni~~~ 253 (668)
+ ...+...+|++.++..++... . .|+.+.+.+|
T Consensus 220 p-------~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 220 P-------LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred C-------CCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 1 123567899999999887644 2 4566666655
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.1e-15 Score=145.53 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=145.3
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---c-CCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---K-ASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+||||||+|+||+++++.|+++ +++|++++|... ..+..+... . ....+..+.+|+.|.+.+.+++..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDA-AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcc-hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999998 678998887521 112111111 0 112245688999999998877642
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHH----HHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIY----GTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~----~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..++....+++|+. ++.++++.+++.+ .++||++||...+.....
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~--------- 147 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPD--------- 147 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCC---------
Confidence 36899999999754321 22234567788887 7777888887754 689999999877654321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCC--C-hHHHHHHHHHcCCCceeecCCCce
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPE--K-LIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
...|+.+|...+.+++.++.+. ++++..++|+.+.+|..... . ..........++. ..
T Consensus 148 -----~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~ 213 (251)
T PRK07069 148 -----YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV---------PL 213 (251)
T ss_pred -----CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC---------CC
Confidence 3469999999999999877542 48889999999988854210 0 0001111111111 11
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+.+++|++++++.++..+. .|+.+.+.++
T Consensus 214 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 214 GRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred CCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 234578999999988776432 3445555443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-15 Score=150.25 Aligned_cols=192 Identities=13% Similarity=0.031 Sum_probs=133.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+.++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEV 90 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 579999999999999999999999864 23357999999988887753 5799
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||..... ..+....+....+++|+.++.++++++.. .+ .+++++||...|.+
T Consensus 91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~------------------ 152 (274)
T PRK07775 91 LVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ------------------ 152 (274)
T ss_pred EEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC------------------
Confidence 99999976210 01112234455678999999999998753 22 26888888766522
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh------hHHHHhhcc-cc-eeecCCCcccHhhHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRY-NK-VVNIPNSMTVLDELLPI 577 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~-~~-~~~~~~~~~~v~D~a~~ 577 (668)
.+..+.|+.+|...|.+++.+.. ..++++.++||+.+..+. ..+...... .. .......+++++|+|++
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a 232 (274)
T PRK07775 153 RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARA 232 (274)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHH
Confidence 12236799999999999988743 248999999998764432 111111100 00 01112468999999999
Q ss_pred HHHHHhccC-Cceeeec
Q 005949 578 SIEMAKRNL-RGIWNFT 593 (668)
Q Consensus 578 ~~~~~~~~~-~g~~ni~ 593 (668)
++.+++++. +.+||+.
T Consensus 233 ~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 233 ITFVAETPRGAHVVNME 249 (274)
T ss_pred HHHHhcCCCCCCeeEEe
Confidence 999998763 3467765
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.6e-15 Score=147.85 Aligned_cols=214 Identities=18% Similarity=0.130 Sum_probs=145.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++++||||||+|.||.++++.|+++ +++|++++|... .++.+.... ....+..+.+|++|.+++.+++..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEA--ELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999998 678988888532 122111111 123466677999999998877642
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...++....+++|+.++.++++++... ....++|++||...+.+..
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 151 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP----------- 151 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------
Confidence 4689999999975421 122334568899999999999887532 1136899999977654432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|...+.+.+.++.+ .++.+.++.||.+..+...................+.+ ...++..
T Consensus 152 ---~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~ 221 (296)
T PRK05872 152 ---GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSV 221 (296)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCH
Confidence 1346999999999999887643 48999999999988764321100001111111111111 1235688
Q ss_pred HHHHHHHHHHHhcC
Q 005949 229 EDVAEAFECILHKG 242 (668)
Q Consensus 229 ~D~a~ai~~~~~~~ 242 (668)
+|+++++..++...
T Consensus 222 ~~va~~i~~~~~~~ 235 (296)
T PRK05872 222 EKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999988754
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.5e-15 Score=149.61 Aligned_cols=209 Identities=17% Similarity=0.132 Sum_probs=144.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++++||||||+|.||++++++|+++ +++|++++|... .++.+... ....++.++.+|++|.+++.+++..
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~--~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEE--ALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAA 79 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999 678998888542 22211111 1134577889999999998877642
Q ss_pred ---CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||...... ..++....+++|+.++.++.+++. +.+ ..++|++||...+....
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p------- 151 (330)
T PRK06139 80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQP------- 151 (330)
T ss_pred HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCC-------
Confidence 46899999999754322 223345678999999998877653 333 46899999976654322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ .++.++.+.||.+.+|........ .+... ....
T Consensus 152 -------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--------~~~~~------~~~~ 210 (330)
T PRK06139 152 -------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--------TGRRL------TPPP 210 (330)
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--------ccccc------cCCC
Confidence 1346999999888888776654 279999999999988854211100 01000 0111
Q ss_pred eceeHHHHHHHHHHHHhcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~~ 244 (668)
.+++.+|+|++++.+++.+..
T Consensus 211 ~~~~pe~vA~~il~~~~~~~~ 231 (330)
T PRK06139 211 PVYDPRRVAKAVVRLADRPRA 231 (330)
T ss_pred CCCCHHHHHHHHHHHHhCCCC
Confidence 356899999999999986643
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-15 Score=149.37 Aligned_cols=195 Identities=12% Similarity=0.070 Sum_probs=135.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+++|||||+|+||+++++.|+++|++| .++.+|+.|.+++.++++.. ++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 579999999999999999999999854 24567999998877766553 4799
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+|+...... ......+....++.|+.++.+++++| ++.++ +++++||...+.+.
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----------------- 144 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS----------------- 144 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC-----------------
Confidence 999999762100 11122234556778999988888887 45555 56677776544221
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHHHhhcccc------------eeecCCCcccH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK------------VVNIPNSMTVL 571 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~------------~~~~~~~~~~v 571 (668)
+..+.|+.+|...|.+++.+.. ..+++++.+||+.++++. ..+........ .......++++
T Consensus 145 -~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (255)
T TIGR01963 145 -PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTV 223 (255)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCH
Confidence 1236799999999998877643 248999999999999885 12211111100 01122368999
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
+|+|++++.++.+. .++.||+.++.
T Consensus 224 ~d~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 224 DEVAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred HHHHHHHHHHcCccccCccceEEEEcCcc
Confidence 99999999999753 35679998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.4e-15 Score=142.24 Aligned_cols=196 Identities=16% Similarity=0.144 Sum_probs=141.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--CCCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT--ESIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~ 83 (668)
|++||||||+|+||++++++|+++ +++|++++|... .++.+... ..++.++.+|++|.+.+.+++.. ..+|.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~ 74 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQS--VLDELHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPEL 74 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHH--HHHHHHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence 368999999999999999999998 678998888532 12221111 23578899999999999988854 24799
Q ss_pred EEEcCccCCc-c---cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccc-cCCCCCCcCCCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHV-D---NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEV-YGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 84 Vih~a~~~~~-~---~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~~~~p~~ 157 (668)
+||+||.... + ...++....+++|+.++.++++++... ...+++|++||... ++.. ...
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---------------~~~ 139 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP---------------RAE 139 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC---------------CCc
Confidence 9999985431 1 122334568999999999999988753 11357999988543 2211 234
Q ss_pred hhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
.|+.+|...+.+.+.++. ..+++++++|||.++++...... ... ...+..+|+++.
T Consensus 140 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~--------------~~~-------~~~~~~~~~a~~ 198 (240)
T PRK06101 140 AYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT--------------FAM-------PMIITVEQASQE 198 (240)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC--------------CCC-------CcccCHHHHHHH
Confidence 699999999999988764 34899999999999987542110 000 013578999999
Q ss_pred HHHHHhcCC
Q 005949 235 FECILHKGE 243 (668)
Q Consensus 235 i~~~~~~~~ 243 (668)
+...++.+.
T Consensus 199 i~~~i~~~~ 207 (240)
T PRK06101 199 IRAQLARGK 207 (240)
T ss_pred HHHHHhcCC
Confidence 999998753
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2e-15 Score=150.40 Aligned_cols=197 Identities=10% Similarity=0.045 Sum_probs=133.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++|+||||+|+||+++++.|+++|++| ..+.+|++|++++.++++++ ++|+|||
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~ 84 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVN 84 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 579999999999999999999999854 24567999999888887764 5799999
Q ss_pred cccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||....... +.........+++|+.|+.++++++. +.+. +++++||...+.+ .++
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~------------------~~~ 146 (277)
T PRK06180 85 NAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT------------------MPG 146 (277)
T ss_pred CCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC------------------CCC
Confidence 9997621011 11122335568899999999999854 3333 6888888654421 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------------HHHHhhcc--cceeecCCCcccHhh
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------------FITKISRY--NKVVNIPNSMTVLDE 573 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------------~~~~~~~~--~~~~~~~~~~~~v~D 573 (668)
.+.|+.+|...|.+++.+.. ..++++++++|+.+..+.. +....... .........+...+|
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 226 (277)
T PRK06180 147 IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAK 226 (277)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHH
Confidence 46899999999998877642 3589999999998865420 00000000 000011234567899
Q ss_pred HHHHHHHHHhccCCceeeecCCCcc
Q 005949 574 LLPISIEMAKRNLRGIWNFTNPGVV 598 (668)
Q Consensus 574 ~a~~~~~~~~~~~~g~~ni~~~~~~ 598 (668)
+|++++.+++++......+.+++..
T Consensus 227 va~~~~~~l~~~~~~~~~~~g~~~~ 251 (277)
T PRK06180 227 AAQAILAAVESDEPPLHLLLGSDAL 251 (277)
T ss_pred HHHHHHHHHcCCCCCeeEeccHHHH
Confidence 9999999998764444444443443
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-14 Score=143.93 Aligned_cols=220 Identities=14% Similarity=0.085 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++++|... .+..+... ....++.++.+|+.+.+.+.+++.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVE--RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999998 678998888542 12111111 1123578999999999998887643
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc----C-------CCcEEEEEcCccccCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT----G-------QIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-------~~~~~v~~SS~~vyg~~~~ 141 (668)
.++|+|||+||...... ..+++...+..|+.++.++++++... . ...++|++||...+...
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-- 160 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL-- 160 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC--
Confidence 36899999999744211 22345577899999999998876521 1 02589999997665332
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
.+..+|+.+|.+.+.+++.++.+ .++++++++||.|+++....... ........+ .++
T Consensus 161 ------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~--~~~---- 221 (258)
T PRK06949 161 ------------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVS--MLP---- 221 (258)
T ss_pred ------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHh--cCC----
Confidence 12457999999999999987765 48999999999999886421111 111111111 111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCC---CCceEEEc
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVG 251 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~ 251 (668)
...+...+|+++++..++.... .|..+.+.
T Consensus 222 ---~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~d 254 (258)
T PRK06949 222 ---RKRVGKPEDLDGLLLLLAADESQFINGAIISAD 254 (258)
T ss_pred ---CCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeC
Confidence 1124567899999998876432 34444444
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.6e-15 Score=146.47 Aligned_cols=201 Identities=21% Similarity=0.200 Sum_probs=141.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||.++++.|+++ +++|++++|... .++.+... .....+.++.+|+.|.+++.+++..
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~--~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARR--GATVVAVARRED--LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999998 688999988642 11111111 1123577899999999998887742
Q ss_pred --CCCCEEEEcCccCCcccc------cCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 --ESIDTIMHFAAQTHVDNS------FGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||....... +.+....+++|+.++.++++++. +.+ ..++|++||.+++....
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 186 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEAS------ 186 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC------
Confidence 378999999997543221 12335678899999888877653 433 57999999976654211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.....|+.+|.+.+.+++.++.+ .++++++++||.|-.+...+. .. . .+ .
T Consensus 187 -------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~----------~~-----~--~~---~ 239 (293)
T PRK05866 187 -------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT----------KA-----Y--DG---L 239 (293)
T ss_pred -------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc----------cc-----c--cC---C
Confidence 12357999999999998887654 389999999998776532110 00 0 00 1
Q ss_pred eceeHHHHHHHHHHHHhcC
Q 005949 224 SYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~ 242 (668)
..+..+++|+.++.+++++
T Consensus 240 ~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 240 PALTADEAAEWMVTAARTR 258 (293)
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 2357899999999998864
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=7e-15 Score=143.59 Aligned_cols=198 Identities=18% Similarity=0.124 Sum_probs=140.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc--CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT--ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~ 80 (668)
||+|+||||+|+||.+++++|+++ +++|++++|.... ...... .....+++++.+|+.|.+.+.+++.. .+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVER--LERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHH--HHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence 468999999999999999999998 6789999886431 111111 11234688999999999988877643 35
Q ss_pred CCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 81 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
+|+|||++|..... ...++....++.|+.++.++++++... ...+++|++||.....+.
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 142 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-------------- 142 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC--------------
Confidence 79999999864322 122334467889999999999877542 225789999986432211
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
.....|+.+|...+.+.+.++.+ .++++.+++|+.+.++.... .. .+. ...+..+|
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~--------------~~--~~~-----~~~~~~~~ 201 (243)
T PRK07102 143 ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG--------------LK--LPG-----PLTAQPEE 201 (243)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc--------------cC--CCc-----cccCCHHH
Confidence 11346999999999999887543 48999999999998863210 00 000 12457899
Q ss_pred HHHHHHHHHhcC
Q 005949 231 VAEAFECILHKG 242 (668)
Q Consensus 231 ~a~ai~~~~~~~ 242 (668)
+++++...++.+
T Consensus 202 ~a~~i~~~~~~~ 213 (243)
T PRK07102 202 VAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHHhCC
Confidence 999999888865
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=147.82 Aligned_cols=223 Identities=18% Similarity=0.120 Sum_probs=144.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
+++|||||+|+||.+++++|+++ +.+|++++|... ....+.. .....++.++.+|++|.+.+.+++.. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEE--TAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999998 678888887532 1111111 11134578899999999998877632 3
Q ss_pred CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||.... +...++....+++|+.++..+++++.. .+...++|++||.....+..
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 145 (254)
T TIGR02415 77 GFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP----------- 145 (254)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC-----------
Confidence 68999999997542 122334457789999998877765543 23236899999855432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCcee------ecCCCce
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI------HGDGSNV 222 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 222 (668)
....|+.+|...|.+++.++.+. ++++.+++||.+..+... .+............ .......
T Consensus 146 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (254)
T TIGR02415 146 ---ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE------EIDEETSEIAGKPIGEGFEEFSSEIAL 216 (254)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh------hhhhhhhhcccCchHHHHHHHHhhCCC
Confidence 14569999999999998876653 799999999988765321 11100000000000 0000011
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+...+|+++++..++.... .+..+.+.++
T Consensus 217 ~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 217 GRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred CCCCCHHHHHHHHHhhcccccCCccCcEEEecCC
Confidence 236788999999999988653 2444444433
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=142.92 Aligned_cols=198 Identities=15% Similarity=0.113 Sum_probs=140.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcccc----CCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL----IPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++|||||+|+||++++++|+++ +.+|++.+|.... ...+ .......++.++.+|++|.+.+.+++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDR--LEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRD 77 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999998 5788888886421 1111 1111134688999999999988776642
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||...... ........+++|+.++.++++++. +.+ .++||++||...+.+..
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------- 148 (248)
T PRK08251 78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLP-------- 148 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCC--------
Confidence 36999999999754322 122334678899999999888764 333 67999999965432211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
.+...|+.+|...+.+++.++.+. ++++++++||.+.++.... .+. ....
T Consensus 149 -----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~------------~~~----------~~~~ 201 (248)
T PRK08251 149 -----GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK------------AKS----------TPFM 201 (248)
T ss_pred -----CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc------------ccc----------CCcc
Confidence 123569999999999998877543 7899999999998763310 000 0124
Q ss_pred eeHHHHHHHHHHHHhcCC
Q 005949 226 LYCEDVAEAFECILHKGE 243 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~ 243 (668)
+..+|.|++++.+++.+.
T Consensus 202 ~~~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 202 VDTETGVKALVKAIEKEP 219 (248)
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 678999999999998643
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.3e-15 Score=138.22 Aligned_cols=209 Identities=22% Similarity=0.205 Sum_probs=150.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcC---CCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKA---SSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..++++++||||||+.||..+++.|.++ +++|+++.|+. ..+..+..+.. .-.+.++.+|+++++.+..+..
T Consensus 1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~--~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~ 76 (265)
T COG0300 1 PGPMKGKTALITGASSGIGAELAKQLARR--GYNLILVARRE--DKLEALAKELEDKTGVEVEVIPADLSDPEALERLED 76 (265)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcH--HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHH
Confidence 45677889999999999999999999999 78899998864 33444433222 2357899999999999887763
Q ss_pred c-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 78 T-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
+ ..+|++|++||.... +.++++..++++.|+.++..|-.+.. +.+ -.++|.++|...|-+.+.
T Consensus 77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~--- 152 (265)
T COG0300 77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPY--- 152 (265)
T ss_pred HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcc---
Confidence 2 379999999998653 33455566899999988777665443 333 468999999877655432
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
...|+++|.+.-.+....+.+ .|+.++.+-||.+....... .+..... ...
T Consensus 153 -----------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~------------~~~~~~~---~~~ 206 (265)
T COG0300 153 -----------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA------------KGSDVYL---LSP 206 (265)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc------------ccccccc---ccc
Confidence 346999999988887776654 37999999999877653310 1111110 001
Q ss_pred eEeceeHHHHHHHHHHHHhcCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
.+-++..+|+|++.+..+++..
T Consensus 207 ~~~~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 207 GELVLSPEDVAEAALKALEKGK 228 (265)
T ss_pred hhhccCHHHHHHHHHHHHhcCC
Confidence 2346789999999999998764
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=142.83 Aligned_cols=226 Identities=13% Similarity=0.105 Sum_probs=150.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|++|||||+|.||+++++.|+++ +++|++.+|.... +...... ....++..+.+|++|.+++.+++..
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEEN--LKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999 6788888885321 1111111 1134688999999999998877743
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +...+++...+++|+.+...+.+. .++.+ ..++|++||...+.+..
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~-------- 152 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIP-------- 152 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCC--------
Confidence 368999999996432 123345567888998876665544 44433 47999999987543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC---------CChHHHHHHHHHcCCCceee
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP---------EKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~ 216 (668)
....|+.+|...+.+.+..+.+. |+++..+.||.|-.+.... ....+.......+ ..+
T Consensus 153 ------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-- 222 (263)
T PRK08339 153 ------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK--PIP-- 222 (263)
T ss_pred ------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc--cCC--
Confidence 13469999999999999887654 7999999999987653100 0000111111111 111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
...+...+|++.++..++... ..++.+.+.+|...|
T Consensus 223 -----~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 223 -----LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred -----cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 123567899999999888643 246677777665444
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=140.93 Aligned_cols=219 Identities=17% Similarity=0.243 Sum_probs=145.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|++|||||+|+||++++++|+++ +++|+++.|... ......... ....++.++.+|+.|++.+.++++. .
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNE-ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57999999999999999999998 667877776321 111111000 1124688999999999988776642 3
Q ss_pred CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||.... ....+++...++.|+.++..+++.+ ++.+ .+++|++||.....+.
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~------------ 144 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQ------------ 144 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC------------
Confidence 68999999997532 1223345567889999988765544 4433 6799999996433211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
.....|+.+|...+.+++.++.+ .+++++.++|+.+.++... ...+.+........+. ..+...
T Consensus 145 --~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~--~~~~~~~~~~~~~~~~---------~~~~~~ 211 (242)
T TIGR01829 145 --FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM--AMREDVLNSIVAQIPV---------GRLGRP 211 (242)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc--ccchHHHHHHHhcCCC---------CCCcCH
Confidence 12346999999999888887654 3899999999999987542 1222233222222211 123456
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 229 EDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+|+++++..++..+. .|+.+.+.++.
T Consensus 212 ~~~a~~~~~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 212 EEIAAAVAFLASEEAGYITGATLSINGGL 240 (242)
T ss_pred HHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 899999887765432 46677777653
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.9e-15 Score=146.59 Aligned_cols=189 Identities=11% Similarity=0.065 Sum_probs=135.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc--------
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-------- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-------- 430 (668)
++|+||||+|+||.+++++|+++|++| .++.+|++|++++.++++..
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~ 86 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV 86 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence 589999999999999999999999854 23557999999888877753
Q ss_pred ---CCCEEEEcccccCCCCcccc----ccccccceehhhhhhHHHHHHHHHc--C-CcEEEEecceeEeecCCCCCCCCC
Q 005949 431 ---KPTHVFNAAGVTGRPNVDWC----ESHKTDTIRTNVAGTLTLADVCRDH--G-ILMMNYATGCIFEYDAAHPEGSGI 500 (668)
Q Consensus 431 ---~~d~Vih~a~~~~~~~~~~~----~~~~~~~~~~Nv~~~~~ll~~~~~~--~-~~~v~~sS~~vy~~~~~~p~~~~~ 500 (668)
++|+|||+||.. ..... .......+++|+.++.++++++... . .+++++||..++.+
T Consensus 87 ~~~~id~vi~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~---------- 153 (254)
T PRK12746 87 GTSEIDILVNNAGIG---TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG---------- 153 (254)
T ss_pred CCCCccEEEECCCCC---CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC----------
Confidence 589999999976 22211 2222456679999999999998763 2 36888888766521
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc------eeecCCCcccH
Q 005949 501 GYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK------VVNIPNSMTVL 571 (668)
Q Consensus 501 ~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~v 571 (668)
.++.+.|+.+|...|.+++.+.. ..++++..++|+.+.++.. ......+. .......++++
T Consensus 154 --------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
T PRK12746 154 --------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN--AKLLDDPEIRNFATNSSVFGRIGQV 223 (254)
T ss_pred --------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch--hhhccChhHHHHHHhcCCcCCCCCH
Confidence 12346799999999998877643 3579999999999887742 11111000 00112356789
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCC
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+|+++++..++... .+.+||+.++
T Consensus 224 ~dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 224 EDIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 99999999888753 3568999876
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=144.45 Aligned_cols=210 Identities=19% Similarity=0.205 Sum_probs=142.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-----ccccCC--CcCCCCeEEEEccCCCHHHHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIP--SKASSNFKFVKGDIASADLVN 73 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~~~--~~~~~~~~~~~~Dl~d~~~~~ 73 (668)
|..++++++|||||+|+||++++++|+++ +++|++++|...... ++.... .....++.++.+|+++.+.+.
T Consensus 1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 1 MMSLSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHH
Confidence 44456789999999999999999999999 678888888643210 000000 011346788999999999988
Q ss_pred HHhcc-----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCC
Q 005949 74 FLLIT-----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 74 ~~~~~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~ 141 (668)
+++.. .++|+|||+||...... +.++....+++|+.++.++++++... ..-.++|++||.......
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-- 156 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK-- 156 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc--
Confidence 77743 27999999999754322 22344567889999999999988642 113588999875321110
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCcee-CCCCCCCChHHHHHHHHHcCCCceeec
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVY-GPNQFPEKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (668)
...+...|+.+|.+.|.+++.++.+. +++++.+.|+.+. .+ +.+....+.
T Consensus 157 ----------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~----------~~~~~~~~~------ 210 (273)
T PRK08278 157 ----------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA----------AVRNLLGGD------ 210 (273)
T ss_pred ----------ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH----------HHHhccccc------
Confidence 11335679999999999999987764 7899999998432 21 111111111
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
.....+...+|++++++.++...
T Consensus 211 --~~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 211 --EAMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred --ccccccCCHHHHHHHHHHHhcCc
Confidence 01123567899999999988754
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.4e-14 Score=136.65 Aligned_cols=216 Identities=14% Similarity=0.142 Sum_probs=145.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|+|++|||||+|+||++++++|+++ +++|++++|.... ....+ ...++.++.+|+.|.+.+.+++.. .
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYP-AIDGL----RQAGAQCIQADFSTNAGIMAFIDELKQHTD 73 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchh-HHHHH----HHcCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence 3579999999999999999999998 6789888885421 11111 112467899999999988776643 2
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CC--CcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQ--IRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~--~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
++|++||+||..... ...++....+++|+.++..+.+.+... .. ..++|++||.....+.
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------- 142 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS----------- 142 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-----------
Confidence 589999999964322 123445678899999998777665542 11 3589999986432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
.....|+.+|...|.+++.++.++ ++++.+++||.+.-+.... ...........+ + . -+...
T Consensus 143 ---~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~----~~~~~~~~~~~~--~-----~--~~~~~ 206 (236)
T PRK06483 143 ---DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD----AAYRQKALAKSL--L-----K--IEPGE 206 (236)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC----HHHHHHHhccCc--c-----c--cCCCH
Confidence 123469999999999999988764 5899999999875332111 111111122111 1 0 13468
Q ss_pred HHHHHHHHHHHhcCC-CCceEEEcCCC
Q 005949 229 EDVAEAFECILHKGE-VGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~-~~~~~ni~~~~ 254 (668)
+|+++++..++.... .|+.+.+.+|.
T Consensus 207 ~~va~~~~~l~~~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 207 EEIIDLVDYLLTSCYVTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence 899999998886432 45667776553
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-15 Score=149.24 Aligned_cols=199 Identities=15% Similarity=0.062 Sum_probs=136.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+.++||||+|+||+++++.|+++|++| .++.+|++|++++.+ +++. ++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~i 82 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRI 82 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCe
Confidence 369999999999999999999999854 234678999888776 5442 57
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||....... +....+....+++|+.++.++++++ ++.+. +++++||...+.+
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------- 146 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG---------------- 146 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC----------------
Confidence 999999997621111 1122344566789999999998886 44544 6677777543311
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHH-----Hhhcc-c-------c----eeecCC
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFIT-----KISRY-N-------K----VVNIPN 566 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~-----~~~~~-~-------~----~~~~~~ 566 (668)
..+.+.|+.+|...|.+++.+. ...++++++++|+.+..+..-.. ..... . . ......
T Consensus 147 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (280)
T PRK06914 147 --FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSD 224 (280)
T ss_pred --CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhh
Confidence 1234689999999999888764 34689999999998887631000 00000 0 0 000123
Q ss_pred CcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHH
Q 005949 567 SMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHN 601 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~ 601 (668)
.+++++|+|++++.++.++ ....||++++..+++.
T Consensus 225 ~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 225 TFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred ccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 5678999999999999876 3457999987766554
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.5e-15 Score=145.45 Aligned_cols=194 Identities=15% Similarity=0.120 Sum_probs=134.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||.+++++|+++|++| ..+.+|++|++++.++++.. .+|+
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 84 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDI 84 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999864 24678999999888877754 6899
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+|+....... ..........+++|+.++.++++.+ ++.+. +++++||...+.+
T Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~------------------ 146 (258)
T PRK12429 85 LVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG------------------ 146 (258)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC------------------
Confidence 9999996621111 1112233456779999966555555 44555 6777777654421
Q ss_pred CCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--HHHHhhcc-c-c----------eeecCCCcccH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISRY-N-K----------VVNIPNSMTVL 571 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~~-~-~----------~~~~~~~~~~v 571 (668)
....+.|+.+|...+.+.+.+. ...++++..++|+.+++|.. .+...... + . .......++++
T Consensus 147 ~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (258)
T PRK12429 147 SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTV 226 (258)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCH
Confidence 1234689999999998887653 23579999999999998752 11111100 0 0 01123479999
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCC
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+|+|+++..++... .+..|++.++
T Consensus 227 ~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 227 EEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred HHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 99999999998753 2567888765
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-14 Score=139.95 Aligned_cols=224 Identities=17% Similarity=0.136 Sum_probs=144.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||.++++.|+++ +++|++..|.... ........ ....++.++.+|++|.+.+.+++..
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEE-EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 5777776664311 11111100 1123577899999999988776632
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHH----HHHHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLE----ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||...... ..+++...+++|+.++..+++ .+.+.+.-.++|++||...+.+
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~---------- 151 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP---------- 151 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC----------
Confidence 36899999999754321 223345678999888766554 4454332368999999643322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
..+...|+.+|.+.+.+.+.++.++ ++++.+++||.+..+.......-+.......... + ...+
T Consensus 152 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~ 218 (261)
T PRK08936 152 ----WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMI--P-------MGYI 218 (261)
T ss_pred ----CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcC--C-------CCCC
Confidence 2234579999988888888776543 8999999999998885321100111112111111 1 1135
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+|+++++..++.... .+..+.+.++
T Consensus 219 ~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 219 GKPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred cCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence 678899999998886432 3444555544
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.8e-15 Score=142.72 Aligned_cols=190 Identities=14% Similarity=0.036 Sum_probs=129.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-CCCEEEEcccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGV 441 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~ 441 (668)
||+++||||+|+||+++++.|+++ ++| .++.+|++|++++.++++.+ ++|+|||++|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 468999999999999999999998 764 34568999999998888865 57999999997
Q ss_pred cCCCC-ccccccccccceehhhhh----hHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 442 TGRPN-VDWCESHKTDTIRTNVAG----TLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 442 ~~~~~-~~~~~~~~~~~~~~Nv~~----~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
..... .....++....+++|+.+ +.++++++++.+.+++++||+..+++. .+...|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~------------------~~~~~y~ 143 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRAN------------------PGWGSYA 143 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcC------------------CCCchHH
Confidence 61000 011112234457788888 455555555666688888887655221 1235799
Q ss_pred hhHHHHHHHHHhccC-eeE-eEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccC-Cceeeec
Q 005949 517 KTKAMVEELLKEYDN-VCT-LRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL-RGIWNFT 593 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~-~~~-l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~-~g~~ni~ 593 (668)
.+|...|.++..+.. ... +++..++++.+..+. ...+............+++++|++++++.+++++. +.++|+.
T Consensus 144 ~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~~ 221 (227)
T PRK08219 144 ASKFALRALADALREEEPGNVRVTSVHPGRTDTDM--QRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPPDAHITEVV 221 (227)
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEEecCCccchH--hhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence 999999988777532 123 899999988766553 11221111111123467899999999999998764 4466654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.6e-14 Score=138.29 Aligned_cols=225 Identities=16% Similarity=0.081 Sum_probs=150.0
Q ss_pred CCCC-CCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATY-TPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~-~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|+.+ ++|++|||||+ +.||+.+++.|+++ +++|++.+|... ...........++..+.+|++|++++.++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDR---MKKSLQKLVDEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchH---HHHHHHhhccCceeEEeCCCCCHHHHHHHHH
Confidence 6654 46899999999 79999999999999 688888877521 1111111112357889999999998877663
Q ss_pred c-----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~ 143 (668)
. .++|++||+||.... +...+++...+++|+.++..+.+++... ..-.++|++||.......
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~---- 151 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI---- 151 (252)
T ss_pred HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC----
Confidence 2 469999999997531 1223345667889999998888776542 112589999986542211
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
.....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+.......-..+.....+.. +.
T Consensus 152 ----------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~----- 214 (252)
T PRK06079 152 ----------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRT--VD----- 214 (252)
T ss_pred ----------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcC--cc-----
Confidence 12356999999999999988765 48999999999998764211000112222222211 11
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+...+|+++++..++.... .++++.+.++
T Consensus 215 --~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 215 --GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred --cCCCCHHHHHHHHHHHhCcccccccccEEEeCCc
Confidence 125678999999998886532 4566666544
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.2e-15 Score=145.93 Aligned_cols=207 Identities=13% Similarity=0.044 Sum_probs=144.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++++||||+|+||..+++.|+++|++| ..+.+|++|.+++.+.++.+ ++|+||
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV 82 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 579999999999999999999999743 34578999999888777764 589999
Q ss_pred EcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|++|....... ..........+.+|+.++.++++++.. .+. +++++||...+. + +
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~------~-------- 143 (257)
T PRK07074 83 ANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-----A------L-------- 143 (257)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-----C------C--------
Confidence 99997621111 111122234467999999999988843 333 566777643221 0 0
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHH-----HHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI-----TKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
....|+.+|...|.+++.+.+ ..++++..++|+.++++.... ..+...........++++++|++++++.++
T Consensus 144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLA 223 (257)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 113699999999999888753 347999999999988774210 001110000111247899999999999999
Q ss_pred hcc----CCceeeecCCCccCHHHHHHHHHh
Q 005949 583 KRN----LRGIWNFTNPGVVSHNEILEMYKK 609 (668)
Q Consensus 583 ~~~----~~g~~ni~~~~~~s~~e~~~~i~~ 609 (668)
... .+..+++.++...+.+|+++.+..
T Consensus 224 ~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 224 SPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred CchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 642 355778888888899999988754
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.5e-15 Score=144.36 Aligned_cols=166 Identities=16% Similarity=0.125 Sum_probs=121.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-------
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT------- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------- 78 (668)
||+||||||+|+||++++++|+++ +++|++++|..... . ......++.++.+|+.|.+.+.+++.+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~-~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPS-L----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchh-h----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 358999999999999999999998 67888888754321 1 111234688899999999988875432
Q ss_pred --CCCCEEEEcCccCCccc-----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||...... ..+++...+.+|+.++..+.+.+... ...+++|++||...+.+..
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 145 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA-------- 145 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC--------
Confidence 25899999999754211 22334577889999977666555432 1257999999977654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh--cCCCEEEEeeCceeCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS--YGLPVITTRGNNVYGP 192 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~ 192 (668)
+...|+.+|...|.+++.++.+ .++++.+++||.+-.+
T Consensus 146 ------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 146 ------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred ------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 3457999999999999988754 4799999999987554
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.5e-15 Score=149.46 Aligned_cols=197 Identities=19% Similarity=0.140 Sum_probs=141.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|.+++.++++.. ++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 135 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGL 135 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCC
Confidence 5899999999999999999999998652 3457899988888777654 68
Q ss_pred CEEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 433 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|+|||+||.... +..+...++....+++|+.++.++++++... +.++|++||...|...
T Consensus 136 D~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 199 (300)
T PRK06128 136 DILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS---------------- 199 (300)
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC----------------
Confidence 999999996511 1112234566778999999999999999753 4478888887766321
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH----HHHhh-cccceeecCCCcccHhhHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF----ITKIS-RYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~----~~~~~-~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.....|+.||...+.+++.+.. ..++++..++|+.+.++..- ..... ..+.... ...+...+|++.+++
T Consensus 200 --~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p-~~r~~~p~dva~~~~ 276 (300)
T PRK06128 200 --PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP-MKRPGQPVEMAPLYV 276 (300)
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC-CCCCcCHHHHHHHHH
Confidence 1235699999999999888743 35899999999999887421 01110 0000001 124567899999999
Q ss_pred HHHhcc----CCceeeecCCCccC
Q 005949 580 EMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~s 599 (668)
.++... .+.+|++.++..+|
T Consensus 277 ~l~s~~~~~~~G~~~~v~gg~~~~ 300 (300)
T PRK06128 277 LLASQESSYVTGEVFGVTGGLLLS 300 (300)
T ss_pred HHhCccccCccCcEEeeCCCEeCc
Confidence 988653 35689998876543
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=142.23 Aligned_cols=218 Identities=17% Similarity=0.182 Sum_probs=148.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
++++++|||||+|+||++++++|+++ +++|+++++..... ...++..+.+|++|.+.+.+++..
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDG---------QHENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccc---------ccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 68888888754211 123678899999999998877643
Q ss_pred CCCCEEEEcCccCCcc-------------cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD-------------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~ 142 (668)
.++|+|||+||..... ...+++...+++|+.++..+++++... ....++|++||...+.+..
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 153 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE-- 153 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC--
Confidence 3689999999964321 122344568899999999999887642 1235899999976643321
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCcee-CCCCCCC--C--------hHHHHHHHHH
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVY-GPNQFPE--K--------LIPKFILLAM 208 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~-G~~~~~~--~--------~~~~~~~~~~ 208 (668)
....|+.+|...+.+++.++.+ .++++.+++||.+- .+..... . ....+.....
T Consensus 154 ------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (266)
T PRK06171 154 ------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYT 221 (266)
T ss_pred ------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhc
Confidence 2357999999999999988765 48999999999885 2211100 0 0011111111
Q ss_pred cCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 209 RGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.....+ ...+...+|++.++..++.... .++.+++.+|
T Consensus 222 ~~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 222 KTSTIP-------LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred cccccc-------CCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 100111 1235678999999988876432 3566666654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.3e-14 Score=138.41 Aligned_cols=201 Identities=19% Similarity=0.213 Sum_probs=137.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLI---- 77 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~---- 77 (668)
..++||||||+|+||++++++|+++| +++|++++|.... .++.+.. .....+++++.+|+.|.+.+.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDP-RRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcch-hHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 35799999999999999999999984 4788888886431 0111111 1112368899999999887655442
Q ss_pred cCCCCEEEEcCccCCcc-cccCCh---HHHHHHHHHHHHH----HHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 78 TESIDTIMHFAAQTHVD-NSFGNS---FEFTKNNIYGTHV----LLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~-~~~~~~---~~~~~~nv~~~~~----l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
..++|++||++|..... ..+.+. .+.+++|+.++.. +++.+++.+ ..++|++||...+.+.
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~---------- 153 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR---------- 153 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC----------
Confidence 24799999999875321 112222 2468999988876 566666655 6899999997543221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
.+...|+.+|.+...+.+.++. .+++++++++||.+..+... ..... ...+
T Consensus 154 ----~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------------~~~~~---------~~~~ 207 (253)
T PRK07904 154 ----RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------------HAKEA---------PLTV 207 (253)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------------cCCCC---------CCCC
Confidence 1234699999999987766543 35899999999999875321 00000 0136
Q ss_pred eHHHHHHHHHHHHhcCCC
Q 005949 227 YCEDVAEAFECILHKGEV 244 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~~~ 244 (668)
..+|+|+.++.+++++..
T Consensus 208 ~~~~~A~~i~~~~~~~~~ 225 (253)
T PRK07904 208 DKEDVAKLAVTAVAKGKE 225 (253)
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 789999999999986643
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.5e-15 Score=144.82 Aligned_cols=194 Identities=12% Similarity=0.038 Sum_probs=137.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||.+++++|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVD 86 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999854 23567888988888887763 589
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||....... +.......+.+++|+.++.++++++... +.+++++||...+.+
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 149 (247)
T PRK12935 87 ILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG----------------- 149 (247)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-----------------
Confidence 99999997621111 1223566777899999999999999742 236777777543311
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.++.+.|+.+|...|.+++.+.. ..++++..++|+.+..+.. .................+.+++|++++++.++
T Consensus 150 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~ 228 (247)
T PRK12935 150 -GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLC 228 (247)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHc
Confidence 12346899999999888777643 2489999999998886631 11111100000111346889999999999998
Q ss_pred hcc---CCceeeecCC
Q 005949 583 KRN---LRGIWNFTNP 595 (668)
Q Consensus 583 ~~~---~~g~~ni~~~ 595 (668)
+.. .++.||+.++
T Consensus 229 ~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 229 RDGAYITGQQLNINGG 244 (247)
T ss_pred CcccCccCCEEEeCCC
Confidence 754 4678999886
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.3e-15 Score=144.63 Aligned_cols=194 Identities=17% Similarity=0.135 Sum_probs=138.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||.+++++|+++|++| ..+.+|++|++++.+++++. ++|+
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 90 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDI 90 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999865 23456999999888887764 4899
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||..... ......+.....+.+|+.++.++++++.+. +. +++++||...+. +
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------------~ 152 (255)
T PRK07523 91 LVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL------------------A 152 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc------------------C
Confidence 99999976210 011122333566779999999999999754 33 677777754321 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
.+..+.|+.+|...|.+++.+.. .+++++..++|+.+.++..- ...+.. . . ....+...+|+|.+
T Consensus 153 ~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~dva~~ 228 (255)
T PRK07523 153 RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEK-R--T-PAGRWGKVEELVGA 228 (255)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHh-c--C-CCCCCcCHHHHHHH
Confidence 12346899999999999888743 46899999999999887421 011111 1 0 11246679999999
Q ss_pred HHHHHhcc----CCceeeecCCCccC
Q 005949 578 SIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++.++... .+.++++.++..+|
T Consensus 229 ~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 229 CVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred HHHHcCchhcCccCcEEEECCCeecc
Confidence 99999753 35588888876554
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.4e-15 Score=144.38 Aligned_cols=195 Identities=14% Similarity=0.047 Sum_probs=136.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
|+|+||||+|+||.+++++|+++|++| .++.+|++|++++.+++++. ++|+
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI 85 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999864 23447999998888877753 5799
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||....... ..........++.|+.++.++++++. +.+. +++++||..... +
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~------------------~ 147 (246)
T PRK05653 86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT------------------G 147 (246)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc------------------C
Confidence 9999997621111 11223345668899999999999985 4454 566666653321 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--HHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--ITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
..+.+.|+.+|...|.+++.+.+ ..++++..+||+.++++... ................+++.+|+++++..++.
T Consensus 148 ~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 227 (246)
T PRK05653 148 NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLAS 227 (246)
T ss_pred CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 12336799999999988887643 35899999999999887531 11111111111112457788999999999986
Q ss_pred cc----CCceeeecCCC
Q 005949 584 RN----LRGIWNFTNPG 596 (668)
Q Consensus 584 ~~----~~g~~ni~~~~ 596 (668)
.. .+.+|++++|.
T Consensus 228 ~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 228 DAASYITGQVIPVNGGM 244 (246)
T ss_pred chhcCccCCEEEeCCCe
Confidence 53 35588888764
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.1e-14 Score=135.45 Aligned_cols=191 Identities=18% Similarity=0.157 Sum_probs=139.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~Vi 85 (668)
|++|||||+|.||.++++.|.++ ++|++++|... .+.+|+.|.+.+.++++.. ++|+||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG-----------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 47999999999999999999987 67888887421 3689999999998887543 799999
Q ss_pred EcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 86 HFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 86 h~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
|+||..... ...+++...+++|+.++.++.+++... ....+++++||.....+. .....|+
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~--------------~~~~~Y~ 126 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI--------------PGGASAA 126 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC--------------CCchHHH
Confidence 999965422 223345567889999999999877642 123579999986542211 1245799
Q ss_pred HHHHHHHHHHHHHHHh--cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRS--YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 238 (668)
.+|...+.+.+.++.+ .++++..+.||.+-.+.. .. +..+ .. ..++..+|+|+++..+
T Consensus 127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~-------~~------~~~~--~~-----~~~~~~~~~a~~~~~~ 186 (199)
T PRK07578 127 TVNGALEGFVKAAALELPRGIRINVVSPTVLTESLE-------KY------GPFF--PG-----FEPVPAARVALAYVRS 186 (199)
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchh-------hh------hhcC--CC-----CCCCCHHHHHHHHHHH
Confidence 9999999999988765 489999999998743311 00 0001 11 1357899999999999
Q ss_pred HhcCCCCceEEEc
Q 005949 239 LHKGEVGHVYNVG 251 (668)
Q Consensus 239 ~~~~~~~~~~ni~ 251 (668)
++....+++|+++
T Consensus 187 ~~~~~~g~~~~~~ 199 (199)
T PRK07578 187 VEGAQTGEVYKVG 199 (199)
T ss_pred hccceeeEEeccC
Confidence 9877667777653
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-14 Score=129.06 Aligned_cols=281 Identities=16% Similarity=0.077 Sum_probs=182.5
Q ss_pred CCeEEEEcCCChhHHHHHH-----HHHHhC--CCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 6 PKNILITGAAGFIASHVCN-----RLIRNY--PEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~-----~L~~~g--~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
..+.++-+++|+|+..|.. ++-+.+ ..+.|++++|.+..+.. ..++.+.+++.
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri--tw~el~~~Gip------------------ 71 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI--TWPELDFPGIP------------------ 71 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc--ccchhcCCCCc------------------
Confidence 4577888999999988877 333322 13788888886532211 11111112211
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHcCC-CcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVTGQ-IRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
..|+.+++++|.... ..+..-..+.+...+..|..|+++..++.. .+.+|.+|..++|-+..... ++|+.+.
T Consensus 72 ~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~e---Y~e~~~~ 148 (315)
T KOG3019|consen 72 ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQE---YSEKIVH 148 (315)
T ss_pred eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccc---ccccccc
Confidence 135555555554321 122222335666667788999999998764 35899999999998876533 3666666
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
...+..+..-..-|..++.-.+ ..+.+++|.|.|.|.++ ..+..|+.-...+--.+ .++|.|+++|||++|++.
T Consensus 149 qgfd~~srL~l~WE~aA~~~~~--~~r~~~iR~GvVlG~gG---Ga~~~M~lpF~~g~GGP-lGsG~Q~fpWIHv~DL~~ 222 (315)
T KOG3019|consen 149 QGFDILSRLCLEWEGAALKANK--DVRVALIRIGVVLGKGG---GALAMMILPFQMGAGGP-LGSGQQWFPWIHVDDLVN 222 (315)
T ss_pred CChHHHHHHHHHHHHHhhccCc--ceeEEEEEEeEEEecCC---cchhhhhhhhhhccCCc-CCCCCeeeeeeehHHHHH
Confidence 6665555555555655554322 59999999999999987 33333333333332223 388999999999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceE-------eccCCCC-CCcccccChHHHHhCCCccc
Q 005949 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIK-------FVENRPF-NDQRYFLDDQKLTSLGWSER 305 (668)
Q Consensus 234 ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~-------~~~~~~~-~~~~~~~~~~k~~~lG~~~~ 305 (668)
.|..+++++.-.++.|-..+.+.+..|+.+.+.++++++.-..+. +-+++.. -.....+-..|++++||+.+
T Consensus 223 li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~ 302 (315)
T KOG3019|consen 223 LIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFK 302 (315)
T ss_pred HHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceee
Confidence 999999998877899999999999999999999999987432111 0111110 01112344567778999998
Q ss_pred C-CHHHHHHHH
Q 005949 306 T-IWEEGLRKT 315 (668)
Q Consensus 306 ~-~~~~~l~~~ 315 (668)
+ .+.+++++.
T Consensus 303 yp~vk~Al~~i 313 (315)
T KOG3019|consen 303 YPYVKDALRAI 313 (315)
T ss_pred chHHHHHHHHH
Confidence 5 456666654
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-14 Score=159.09 Aligned_cols=232 Identities=16% Similarity=0.179 Sum_probs=149.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC----cCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS----KASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ....... .....+..+.+|++|.+++.+++.+
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~--~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEA--AEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHH--HHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 45689999999999999999999998 6789988885421 1111110 1123567889999999998887743
Q ss_pred ----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||...... ..+++...+++|+.+...+.+.+ ++.+.-.++|++||...+.+..
T Consensus 488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~------ 561 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK------ 561 (676)
T ss_pred HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC------
Confidence 27999999999754222 12234567788888877765433 3333235899999965432211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCcee-CCCCCCCChHHHHHHHHHcCCC----ceeecC
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVY-GPNQFPEKLIPKFILLAMRGLP----LPIHGD 218 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 218 (668)
....|+.+|.+.+.+++.++.+ .++++..++|+.|+ |.+......... +....+.. ...+..
T Consensus 562 --------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 631 (676)
T TIGR02632 562 --------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREE--RAAAYGIPADELEEHYAK 631 (676)
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhh--hhhcccCChHHHHHHHHh
Confidence 2457999999999999998775 37999999999987 332211111000 00000000 000111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
......+++.+|+|+++..++... ..|.++++.+|..
T Consensus 632 r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 632 RTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred cCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 122235688999999999887643 2467888887653
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.4e-15 Score=144.68 Aligned_cols=193 Identities=16% Similarity=0.113 Sum_probs=130.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+|
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 88 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVL 88 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 579999999999999999999999854 23457888888877777653 68999
Q ss_pred EEcccccC--CCCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 436 ih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
||+||... .|.......+....+++|+.++..+++.+. +.+. +++++||...++.
T Consensus 89 v~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------------ 150 (260)
T PRK12823 89 INNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------------ 150 (260)
T ss_pred EECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------------
Confidence 99998541 111122334455667889988876655554 4444 6788888665410
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHH-HHhh---cccc-e---------eecC-CCccc
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI-TKIS---RYNK-V---------VNIP-NSMTV 570 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~-~~~~---~~~~-~---------~~~~-~~~~~ 570 (668)
+...|+.||...|.+++.+.. ..++++..++|+.+++|.... .... .... . ...+ .-+.+
T Consensus 151 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PRK12823 151 --NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGT 228 (260)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCC
Confidence 124699999999999888743 348999999999999873111 1000 0000 0 0001 12446
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
.+|+|++++.++... .+.+|++.+++
T Consensus 229 ~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 229 IDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred HHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 899999999988643 35588887654
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8e-15 Score=144.57 Aligned_cols=200 Identities=13% Similarity=0.053 Sum_probs=134.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
++|+++||||+|+||+++++.|+++|+++ .++.+|++|.+++.++++.+ +
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 44689999999999999999999999754 23567899988888877654 4
Q ss_pred CCEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHcC-----CcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-----ILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 432 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-----~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
+|+|||+||.... +.......+....+++|+.++.++++++.... ..+++++|...+.
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~---------------- 151 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN---------------- 151 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC----------------
Confidence 7999999996521 11122334556788999999999999987642 2445555533221
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccCee--EeEEeeeecCCCCChhhH-HHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRNF-ITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
+.+....|+.+|...|.+++.+.+.. .+++..++|+.+..+... ............ ......++|+|++++.++
T Consensus 152 --~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~~~~~~~ 228 (258)
T PRK09134 152 --LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATP-LGRGSTPEEIAAAVRYLL 228 (258)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCC-CCCCcCHHHHHHHHHHHh
Confidence 11223579999999999988874322 389999999877543210 011100000111 123467999999999999
Q ss_pred hcc--CCceeeecCCCccCH
Q 005949 583 KRN--LRGIWNFTNPGVVSH 600 (668)
Q Consensus 583 ~~~--~~g~~ni~~~~~~s~ 600 (668)
+++ .+..|++.++..+++
T Consensus 229 ~~~~~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 229 DAPSVTGQMIAVDGGQHLAW 248 (258)
T ss_pred cCCCcCCCEEEECCCeeccc
Confidence 865 345788877765544
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.4e-15 Score=144.65 Aligned_cols=191 Identities=15% Similarity=0.109 Sum_probs=135.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc----------------------------ccccccCChhHHHHHhhhc----
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------------------YGKGRLEDCSSLIADVQSV---- 430 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------------------~~~~D~~d~~~~~~~l~~~---- 430 (668)
+|+++||||+|+||.+++++|+++|+++. ++.+|++|++++.+.++..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 37899999999999999999999998652 3567888988888777642
Q ss_pred -CCCEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH-----HcCC-cEEEEecceeEeecCCCCCCCCCCC
Q 005949 431 -KPTHVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR-----DHGI-LMMNYATGCIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 431 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~-----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~ 502 (668)
++|+|||+||.... +......++....+++|+.++.++++++. +.+. +++++||...+.+.
T Consensus 86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 154 (249)
T PRK12827 86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN----------- 154 (249)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----------
Confidence 58999999997621 01122233456678899999999999998 3343 67777776655221
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh---HH-HHhhcccceeecCCCcccHhhHH
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FI-TKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~-~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
.+...|+.+|...+.+++.+.. ..+++++.++|+.+.++.. +. ..+.+..+ ..-+...+|++
T Consensus 155 -------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~va 223 (249)
T PRK12827 155 -------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVP----VQRLGEPDEVA 223 (249)
T ss_pred -------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCC----CcCCcCHHHHH
Confidence 2235799999999998887643 3589999999999988752 11 11221111 11234689999
Q ss_pred HHHHHHHhcc----CCceeeecCC
Q 005949 576 PISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~ 595 (668)
++++.++... .+..+++.++
T Consensus 224 ~~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 224 ALVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHHcCcccCCccCcEEEeCCC
Confidence 9999988642 3457777664
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=146.87 Aligned_cols=215 Identities=17% Similarity=0.218 Sum_probs=149.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC------------------------------------------cccccccccCCh-
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI------------------------------------------PFEYGKGRLEDC- 420 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~------------------------------------------~v~~~~~D~~d~- 420 (668)
+.|+|||||||+|..+++.|+...- ++..+.||++++
T Consensus 13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~ 92 (467)
T KOG1221|consen 13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD 92 (467)
T ss_pred CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence 4799999999999999999998763 235677887754
Q ss_pred -----hHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCC
Q 005949 421 -----SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAA 493 (668)
Q Consensus 421 -----~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~ 493 (668)
.+++.+.+ ++|+|||+||.+ ++ .+........|+.||.++++.|++..- -++|+||+.+-.....
T Consensus 93 LGis~~D~~~l~~--eV~ivih~AAtv-----rF-de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~ 164 (467)
T KOG1221|consen 93 LGISESDLRTLAD--EVNIVIHSAATV-----RF-DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGH 164 (467)
T ss_pred cCCChHHHHHHHh--cCCEEEEeeeee-----cc-chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccc
Confidence 34443334 469999999966 22 234456678999999999999999753 5889999876633221
Q ss_pred CCCCCCCCCCC-------------CC-------------CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCC
Q 005949 494 HPEGSGIGYKE-------------ED-------------TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNN 547 (668)
Q Consensus 494 ~p~~~~~~~~e-------------e~-------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g 547 (668)
.. +.+|.. ++ ....| +.|..+|+++|+++.++.+ ++|++++||+-+..
T Consensus 165 i~---E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~P-NTYtfTKal~E~~i~~~~~--~lPivIiRPsiI~s 238 (467)
T KOG1221|consen 165 IE---EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWP-NTYTFTKALAEMVIQKEAE--NLPLVIIRPSIITS 238 (467)
T ss_pred cc---ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCC-CceeehHhhHHHHHHhhcc--CCCeEEEcCCceec
Confidence 11 111111 00 01123 8899999999999998764 79999999998876
Q ss_pred hh-----hHHHHhh-------ccccee--------ecCCCcccHhhHHHHHHHHHhc---cC----CceeeecCC--Ccc
Q 005949 548 PR-----NFITKIS-------RYNKVV--------NIPNSMTVLDELLPISIEMAKR---NL----RGIWNFTNP--GVV 598 (668)
Q Consensus 548 ~~-----~~~~~~~-------~~~~~~--------~~~~~~~~v~D~a~~~~~~~~~---~~----~g~~ni~~~--~~~ 598 (668)
.. .|+..+. ..++.. ..-.+++.+|.++.+++.+.-+ .. .-+||++++ .++
T Consensus 239 t~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~ 318 (467)
T KOG1221|consen 239 TYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPV 318 (467)
T ss_pred cccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcc
Confidence 54 3444433 111111 1112889999999999877622 11 349999997 678
Q ss_pred CHHHHHHHHHhhcC
Q 005949 599 SHNEILEMYKKYIN 612 (668)
Q Consensus 599 s~~e~~~~i~~~~g 612 (668)
++.++.+.......
T Consensus 319 t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 319 TWGDFIELALRYFE 332 (467)
T ss_pred cHHHHHHHHHHhcc
Confidence 99999999888754
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1e-13 Score=137.09 Aligned_cols=221 Identities=17% Similarity=0.121 Sum_probs=148.5
Q ss_pred CCCCeEEEEcCCC-hhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAG-FIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG-~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
++++++|||||+| .||+++++.|+++ +++|++.+|... .++.... .....++..+.+|+.+.+.+.+++..
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 90 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHER--RLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDA 90 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 4568999999998 6999999999999 677888887532 1111111 01123578899999999988877643
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...+++...++.|+.++..+++.+.. .+.-.++|++||...+...
T Consensus 91 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------ 164 (262)
T PRK07831 91 AVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ------ 164 (262)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC------
Confidence 3689999999964321 12234556788999999988877653 1113588888885443221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
.+...|+.+|.+.+.+++.++.+ +++++.+++||.+..|..... .-...........+ +
T Consensus 165 --------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~--~------- 226 (262)
T PRK07831 165 --------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREA--F------- 226 (262)
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCC--C-------
Confidence 12456999999999999998865 489999999999998854211 11122222222221 1
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGT 252 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~ 252 (668)
..+...+|++++++.++.... .|+.+.+.+
T Consensus 227 ~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 227 GRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred CCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence 125577899999998886532 455555554
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.6e-15 Score=143.77 Aligned_cols=196 Identities=13% Similarity=0.055 Sum_probs=134.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||++++++|+++|++|. ++.+|++|++++.+++++. ++|
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD 84 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999998642 3458899999888888764 689
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... |..+.........+++|+.++.++++++... +. ++|++||...+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------ 146 (250)
T PRK08063 85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR------------------ 146 (250)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc------------------
Confidence 99999986510 1111112222345779999999999998753 33 567777754331
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH--HHhhcccceeecCCCcccHhhHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI--TKISRYNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~--~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
+.++...|+.+|.+.|.+++.+.. ..++++..++|+.+..+.. +. ..+............++..+|+|++++.
T Consensus 147 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 226 (250)
T PRK08063 147 YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLF 226 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 112346799999999999988643 3589999999998876531 00 0010000000112346789999999999
Q ss_pred HHhcc----CCceeeecCCCc
Q 005949 581 MAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~~~ 597 (668)
++..+ .+..+++.++..
T Consensus 227 ~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 227 LCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred HcCchhcCccCCEEEECCCee
Confidence 98753 356778777644
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-14 Score=139.85 Aligned_cols=206 Identities=17% Similarity=0.111 Sum_probs=141.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++++||||||+|+||.+++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+..++..
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEK--LEALAARLPYPGRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 6789988886421 1111111 1134688999999999988776532
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||...... ..++....+++|+.++.++++.+... ....++|++||...+.+..
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------- 147 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP----------- 147 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-----------
Confidence 46899999999754321 22334567889999999999887531 1246899998854432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|...+.+++.++.+ .++.++.+.||.+.++... ... . ... .. .......+
T Consensus 148 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~------~~~----~--~~~--~~--~~~~~~~~ 208 (263)
T PRK09072 148 ---GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS------EAV----Q--ALN--RA--LGNAMDDP 208 (263)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh------hhc----c--ccc--cc--ccCCCCCH
Confidence 1346999999999988887754 3789999999988665321 000 0 000 00 00135678
Q ss_pred HHHHHHHHHHHhcCC
Q 005949 229 EDVAEAFECILHKGE 243 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~ 243 (668)
+|+|++++.+++++.
T Consensus 209 ~~va~~i~~~~~~~~ 223 (263)
T PRK09072 209 EDVAAAVLQAIEKER 223 (263)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998763
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=143.75 Aligned_cols=196 Identities=15% Similarity=0.055 Sum_probs=135.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++|+||||+|+||.++++.|+++|++| ..+.+|+++++++.+++++. ++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999854 23456889888888777653 68
Q ss_pred CEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 433 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|+|||+||...... .+....+....+++|+.++.++++++.. .+ .+++++||.....+
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~--------------- 147 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG--------------- 147 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC---------------
Confidence 99999999762111 1112234456678999999888887754 34 36777777542211
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHH---HHhhccc-----cee------ecCCCc
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFI---TKISRYN-----KVV------NIPNSM 568 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~---~~~~~~~-----~~~------~~~~~~ 568 (668)
....+.|+.||.+.+.+++.+. ...++++..++++.++++..+. ....... ... ..-..+
T Consensus 148 ---~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (259)
T PRK12384 148 ---SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG 224 (259)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence 1123579999999998887764 2478999999999887664322 1111000 000 011257
Q ss_pred ccHhhHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 569 TVLDELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
++.+|++++++.++.+. .+.+||+.+++.
T Consensus 225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred CCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 78999999999888643 356799988754
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.4e-15 Score=153.52 Aligned_cols=203 Identities=13% Similarity=0.042 Sum_probs=140.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc---------------------------------ccccccCChhHHHHHhhhc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------------------YGKGRLEDCSSLIADVQSV 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------------------~~~~D~~d~~~~~~~l~~~ 430 (668)
+.|+||||+|+||++++++|+++|++|. ++.+|++|.+++.+.+.++
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggi 160 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNA 160 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCC
Confidence 4799999999999999999999998651 3567899999998888876
Q ss_pred CCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 431 KPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 431 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|+|||++|.. .. ...+....+++|+.|+.+|+++|++.++ ++|++||..++.. ..+ .. ..
T Consensus 161 --DiVVn~AG~~---~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~--g~p--------~~--~~ 221 (576)
T PLN03209 161 --SVVICCIGAS---EK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKV--GFP--------AA--IL 221 (576)
T ss_pred --CEEEEccccc---cc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhccc--Ccc--------cc--ch
Confidence 9999999865 11 1123455678999999999999999987 6777777654211 011 00 11
Q ss_pred CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-HHH--HhhcccceeecCCCcccHhhHHHHHHHHHhcc-
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-FIT--KISRYNKVVNIPNSMTVLDELLPISIEMAKRN- 585 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-~~~--~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~- 585 (668)
.....|...|..+|+.+.. .+++++++|++.++++.. +.. .+...... ......+..+|+|++++.++.++
T Consensus 222 ~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~ 296 (576)
T PLN03209 222 NLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNLTLSEED-TLFGGQVSNLQVAELMACMAKNRR 296 (576)
T ss_pred hhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccccccceeecccc-ccCCCccCHHHHHHHHHHHHcCch
Confidence 2335677889999998865 589999999999887632 110 00000000 01124567889999999998854
Q ss_pred --CCceeeecCCCccCHHHHHHHHHhh
Q 005949 586 --LRGIWNFTNPGVVSHNEILEMYKKY 610 (668)
Q Consensus 586 --~~g~~ni~~~~~~s~~e~~~~i~~~ 610 (668)
...+|.+.++.......+.+++..+
T Consensus 297 as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 297 LSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred hccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 4678999987644444444444433
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.4e-14 Score=137.60 Aligned_cols=204 Identities=16% Similarity=0.103 Sum_probs=138.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCC--HHHHHHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIAS--ADLVNFL 75 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d--~~~~~~~ 75 (668)
|..|++++|+||||+|+||+++++.|+++ +++|++++|.... ...+... .....+..+.+|+.+ .+.+..+
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKK--LEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQF 76 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHH--HHHHHHHHHHcCCCCcceEEeeecccchHHHHHH
Confidence 66777899999999999999999999998 6789998886421 1111110 112245678899875 3334333
Q ss_pred h----cc--CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCC
Q 005949 76 L----IT--ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 76 ~----~~--~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~ 141 (668)
+ .. .++|+|||+||.... +...+++...+++|+.++.++++++... ....++|++||.....+
T Consensus 77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~--- 153 (239)
T PRK08703 77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP--- 153 (239)
T ss_pred HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC---
Confidence 2 11 368999999996421 1223344567899999988888777432 12468999998543211
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeec
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (668)
......|+.+|...+.+++.++.+. ++++++++||.|.+|.... .. .
T Consensus 154 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~--~~--------~-------- 204 (239)
T PRK08703 154 -----------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK--SH--------P-------- 204 (239)
T ss_pred -----------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc--cC--------C--------
Confidence 1123469999999999999887764 5899999999999885310 00 0
Q ss_pred CCCceEeceeHHHHHHHHHHHHhc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
+.....+...+|++.++..++..
T Consensus 205 -~~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 205 -GEAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred -CCCccccCCHHHHHHHHHHHhCc
Confidence 01111345788999999988863
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-14 Score=144.18 Aligned_cols=187 Identities=13% Similarity=0.081 Sum_probs=131.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++++++||||+|+||.++++.|+++ +++|++..|..... ....+.......++.++.+|+.|.+++.+++..
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~ 86 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ 86 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence 34567899999999999999999999998 67888888753211 111111111123688999999999998877643
Q ss_pred -----CCCCEEEEcCccCCcc---cccCChHHHHHHHHHHHHHHHHHHHH---cCCCcEEEEEcCccccCCC-CCCcCCC
Q 005949 79 -----ESIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKV---TGQIRRFIHVSTDEVYGET-DEDAVVG 146 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~~v~~SS~~vyg~~-~~~~~~~ 146 (668)
.++|++||+||..... ...+.....+.+|+.+...+.+.+.. .+ ..++|++||...+... ... +
T Consensus 87 ~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~---~ 162 (313)
T PRK05854 87 LRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWD---D 162 (313)
T ss_pred HHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcc---c
Confidence 3689999999976432 23455677899999998777765542 12 3689999997554322 111 1
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCC
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPN 193 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~ 193 (668)
..+.....+...|+.+|.+.+.+.+.++++ .++.+..+.||.|-.+.
T Consensus 163 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 163 LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 122233345567999999999999988753 36999999999987654
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.1e-13 Score=136.07 Aligned_cols=222 Identities=18% Similarity=0.236 Sum_probs=161.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+||||||||++|++++++|+++ +++|.+..|..... ..+. .++++..+|+.++..+..++ .+.|.+++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~--~~~~-----~~v~~~~~d~~~~~~l~~a~--~G~~~~~~ 69 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAA--AALA-----GGVEVVLGDLRDPKSLVAGA--KGVDGVLL 69 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHH--Hhhc-----CCcEEEEeccCCHhHHHHHh--ccccEEEE
Confidence 57999999999999999999999 77888777764321 1111 57899999999999999999 88999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+.+... .. . ...........+..+.+. .+ +++++++|....-. .....|..+|..+
T Consensus 70 i~~~~~-~~----~-~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~----------------~~~~~~~~~~~~~ 125 (275)
T COG0702 70 ISGLLD-GS----D-AFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADA----------------ASPSALARAKAAV 125 (275)
T ss_pred Eecccc-cc----c-chhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCC----------------CCccHHHHHHHHH
Confidence 887643 11 1 122333444455555555 23 68899988765421 1245699999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC-CCC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG-EVG 245 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~-~~~ 245 (668)
|..+.+. +++++++|+..+|..... .+ .......+.+...... ...+++.++|++.++..++..+ ..+
T Consensus 126 e~~l~~s----g~~~t~lr~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~--~~~~~i~~~d~a~~~~~~l~~~~~~~ 194 (275)
T COG0702 126 EAALRSS----GIPYTTLRRAAFYLGAGA---AF--IEAAEAAGLPVIPRGI--GRLSPIAVDDVAEALAAALDAPATAG 194 (275)
T ss_pred HHHHHhc----CCCeEEEecCeeeeccch---hH--HHHHHhhCCceecCCC--CceeeeEHHHHHHHHHHHhcCCcccC
Confidence 9999753 899999997777765441 11 2222223333332233 3778999999999999888766 467
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~ 274 (668)
++|.+++++..+..+++..+....|++..
T Consensus 195 ~~~~l~g~~~~~~~~~~~~l~~~~gr~~~ 223 (275)
T COG0702 195 RTYELAGPEALTLAELASGLDYTIGRPVG 223 (275)
T ss_pred cEEEccCCceecHHHHHHHHHHHhCCcce
Confidence 89999998899999999999999998754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=143.10 Aligned_cols=183 Identities=14% Similarity=0.056 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||++++++|+++|++| ..+..|++|++++.++++.+ ++|+
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~ 85 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA 85 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence 589999999999999999999999854 34678899998888777664 6899
Q ss_pred EEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc----CCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||.... +.......+....+++|+.++..+++++... +-+++++||...+. +
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~------------------~ 147 (258)
T PRK07890 86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH------------------S 147 (258)
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc------------------C
Confidence 9999996521 1112234556677899999999999999753 23677888765431 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHHHhhcccc-----------eeecCCCcccHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK-----------VVNIPNSMTVLD 572 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~-----------~~~~~~~~~~v~ 572 (668)
.++.+.|+.+|...|.+++.+.. ..++++..++|+.++++. .++........ ....-..+.+++
T Consensus 148 ~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (258)
T PRK07890 148 QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDD 227 (258)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHH
Confidence 22346799999999999988753 357999999999999985 22222111100 000112466789
Q ss_pred hHHHHHHHHHhc
Q 005949 573 ELLPISIEMAKR 584 (668)
Q Consensus 573 D~a~~~~~~~~~ 584 (668)
|++++++.++..
T Consensus 228 dva~a~~~l~~~ 239 (258)
T PRK07890 228 EVASAVLFLASD 239 (258)
T ss_pred HHHHHHHHHcCH
Confidence 999999998874
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-15 Score=142.10 Aligned_cols=166 Identities=19% Similarity=0.273 Sum_probs=123.6
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcc----------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccc
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPF----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~ 449 (668)
|+|+||||++|+.++++|+++|++| +++.+|+.|++++.+.++++ |+|||+++.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~--d~vi~~~~~~---~~-- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGA--DAVIHAAGPP---PK-- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTS--SEEEECCHST---TT--
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhc--chhhhhhhhh---cc--
Confidence 7999999999999999999999864 56678999999999999987 9999999855 11
Q ss_pred cccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHh
Q 005949 450 CESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528 (668)
Q Consensus 450 ~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~ 528 (668)
+...+.+++++|++.++ +++++||..+|...... +.....+. ...|...|..+|+.+..
T Consensus 74 -----------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~-------~~~~~~~~--~~~~~~~~~~~e~~~~~ 133 (183)
T PF13460_consen 74 -----------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGL-------FSDEDKPI--FPEYARDKREAEEALRE 133 (183)
T ss_dssp -----------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSE-------EEGGTCGG--GHHHHHHHHHHHHHHHH
T ss_pred -----------cccccccccccccccccccceeeeccccCCCCCcc-------cccccccc--hhhhHHHHHHHHHHHHh
Confidence 17788999999999998 66677887877532221 11111111 15788999999998864
Q ss_pred ccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 529 YDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 529 ~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
.+++++++||+.+||+..-...+.. .......++++.+|+|++++.++++
T Consensus 134 ----~~~~~~ivrp~~~~~~~~~~~~~~~--~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 134 ----SGLNWTIVRPGWIYGNPSRSYRLIK--EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp ----STSEEEEEEESEEEBTTSSSEEEES--STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred ----cCCCEEEEECcEeEeCCCcceeEEe--ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 3789999999999988521000000 0112233899999999999999864
|
... |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=142.06 Aligned_cols=194 Identities=12% Similarity=0.080 Sum_probs=132.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
..++||||+|+||.+++++|+++|+.| .++.+|++|.+++.++++.. ++|
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD 82 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 469999999999999999999999743 24567899988888877754 579
Q ss_pred EEEEcccccCCCC-c-cccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-V-DWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
+|||+||...... . +...++....+++|+.++.++++++.+. +.+++++||...+.+..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------- 151 (248)
T PRK06123 83 ALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP----------- 151 (248)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----------
Confidence 9999999762110 0 1122344567899999999999888653 12478888875442210
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH---HHHhhc-ccceeecCCCcccHhhHHH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---ITKISR-YNKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---~~~~~~-~~~~~~~~~~~~~v~D~a~ 576 (668)
.....|+.+|...|.+++.+.. ..++++..++|+++++|... ...... ....... .-..+++|+++
T Consensus 152 ------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~d~a~ 224 (248)
T PRK06123 152 ------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPM-GRGGTAEEVAR 224 (248)
T ss_pred ------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCC-CCCcCHHHHHH
Confidence 0013599999999998887643 35899999999999998421 000000 0000000 11246899999
Q ss_pred HHHHHHhcc----CCceeeecCC
Q 005949 577 ISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~ 595 (668)
+++.++... .+..|++.++
T Consensus 225 ~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 225 AILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHhCccccCccCCEEeecCC
Confidence 999988753 3568888764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-14 Score=142.52 Aligned_cols=196 Identities=14% Similarity=0.115 Sum_probs=135.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|+||
T Consensus 12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 91 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLV 91 (264)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 589999999999999999999999864 34567899998888877754 689999
Q ss_pred EcccccCCC--CccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEE-ecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRP--NVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNY-ATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 437 h~a~~~~~~--~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~-sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|+||..... ......++....+++|+.++.++++++.. .+. +++++ ||.....+
T Consensus 92 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~------------------ 153 (264)
T PRK12829 92 NNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG------------------ 153 (264)
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC------------------
Confidence 999965111 11222345567889999999999998843 333 34444 44322111
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhc--c--------cceeec-CCCcccHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR--Y--------NKVVNI-PNSMTVLD 572 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~--~--------~~~~~~-~~~~~~v~ 572 (668)
.+....|+.+|...|.+++.+.. ..++++..+||+.++++.. +...... + ...... ...+++++
T Consensus 154 ~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (264)
T PRK12829 154 YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPE 233 (264)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHH
Confidence 11235799999999999888643 2489999999999999862 2111000 0 000001 12588999
Q ss_pred hHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|+++++..++... .+..|++.++..
T Consensus 234 d~a~~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 234 DIAATALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence 9999999888642 356888888754
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=135.86 Aligned_cols=227 Identities=12% Similarity=0.043 Sum_probs=146.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||+++++.|+++ +++|++++|...... ...+.......++..+.+|++|.+.+.+++..
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678888888542110 01111111123577899999999998776632
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.+...+.+.+ ++.+ ..++|++||...+....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 154 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEP-------- 154 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCC--------
Confidence 3689999999975321 122345567788888776666554 3333 46999999976543321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCCceeec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 217 (668)
....|+.+|...+.+.+..+.+ .|+++..++||.|-.+.... ...+............++
T Consensus 155 ------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 225 (265)
T PRK07062 155 ------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP--- 225 (265)
T ss_pred ------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC---
Confidence 1346999999999888876654 48999999999987663210 000111111111111111
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+...+|++.++..++... ..|+.+.+.+|.
T Consensus 226 ----~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~ 261 (265)
T PRK07062 226 ----LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261 (265)
T ss_pred ----cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence 113567889999999887642 246677776553
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.2e-14 Score=139.47 Aligned_cols=226 Identities=18% Similarity=0.119 Sum_probs=148.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-------CCccccCCC--cCCCCeEEEEccCCCHHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-------SNLKNLIPS--KASSNFKFVKGDIASADL 71 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~~~Dl~d~~~ 71 (668)
|..++++++|||||++.||+++++.|+++ +.+|++.++.... ..+...... ....++..+.+|++|.++
T Consensus 1 m~~l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 78 (286)
T PRK07791 1 MGLLDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDG 78 (286)
T ss_pred CCccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHH
Confidence 66677899999999999999999999999 6778877664200 111111111 112357788999999988
Q ss_pred HHHHhcc-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cC-----CCcEEEEEcCc
Q 005949 72 VNFLLIT-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TG-----QIRRFIHVSTD 133 (668)
Q Consensus 72 ~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-----~~~~~v~~SS~ 133 (668)
+.+++.. .++|++||+||.... ....+++...+++|+.++..+.+++.. .. .-.++|++||.
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~ 158 (286)
T PRK07791 79 AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG 158 (286)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence 8776632 468999999997542 122344567899999999888876642 11 02489999996
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC
Q 005949 134 EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG 210 (668)
Q Consensus 134 ~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~ 210 (668)
..+.+.. ....|+.+|.+.+.+.+.++.+ +++++..+.|+ +..+.. ..........
T Consensus 159 ~~~~~~~--------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~------~~~~~~~~~~ 217 (286)
T PRK07791 159 AGLQGSV--------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT------ETVFAEMMAK 217 (286)
T ss_pred hhCcCCC--------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc------hhhHHHHHhc
Confidence 5432221 1346999999999999987765 48999999998 432211 1111111111
Q ss_pred CCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 211 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
. .. ....+...+|++.+++.++... ..|+.+.+.+|...
T Consensus 218 ~-----~~--~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 218 P-----EE--GEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS 259 (286)
T ss_pred C-----cc--cccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence 0 00 1113457899999999888642 24666777665543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.5e-14 Score=141.72 Aligned_cols=219 Identities=19% Similarity=0.169 Sum_probs=144.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||++++++|+++ +.+|++.++.... ..+..... ....++.++.+|+.|.+.+.++++.
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~-~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASAL-DASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchh-HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 6788888764321 11111110 1134678899999999888877643
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc--------C--CCcEEEEEcCccccCCCCCCc
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT--------G--QIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~--~~~~~v~~SS~~vyg~~~~~~ 143 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... + .-.++|++||...+....
T Consensus 87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 163 (306)
T PRK07792 87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV--- 163 (306)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC---
Confidence 4699999999975432 233445678899999999999876421 0 024899999976543321
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
....|+.+|...+.+++.++.+ +++++..+.|+. -.+ ....+. ...... ..
T Consensus 164 -----------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~------~~~~~~----~~~~~~-~~--- 217 (306)
T PRK07792 164 -----------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA------MTADVF----GDAPDV-EA--- 217 (306)
T ss_pred -----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc------hhhhhc----cccchh-hh---
Confidence 1346999999999999887764 478888888862 111 111100 000000 00
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.....+..+|++.++..++... ..|++|.+.++.
T Consensus 218 ~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~ 254 (306)
T PRK07792 218 GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPM 254 (306)
T ss_pred hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence 1123457899999998887642 356677776543
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=135.28 Aligned_cols=227 Identities=14% Similarity=0.080 Sum_probs=146.7
Q ss_pred CCCCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 2 ATYTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
..+++|+++||||+ +.||.++++.|+++ +++|++.+|.... ..++.+.......++..+.+|++|.+++.++++.
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 34567899999997 89999999999999 6788887764211 1222222211234678899999999998877642
Q ss_pred -----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|++||+||.... +...+.....+++|+.++..+.+++... ..-.++|++||....-..
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----- 155 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV----- 155 (257)
T ss_pred HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC-----
Confidence 468999999996431 1122234457788999988877666532 112589999986542111
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
.....|+.+|...+.+.+.++.++ |+++..+.||.+-.+......-........... .+
T Consensus 156 ---------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p------- 217 (257)
T PRK08594 156 ---------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--AP------- 217 (257)
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--CC-------
Confidence 113469999999999999887643 799999999998765321000000111111111 11
Q ss_pred eEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+...+|++++++.++.... .++.+.+.+|
T Consensus 218 ~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 218 LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred ccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence 1134678999999998886432 3556666544
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.58 E-value=1e-13 Score=135.10 Aligned_cols=205 Identities=18% Similarity=0.140 Sum_probs=138.9
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----CCC
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-----ESI 81 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 81 (668)
||||||+|+||.++++.|+++ +++|+++++.... ....+... ....++.++.+|+.|.+.+.+++.. .++
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRS-DAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999 6788887764321 11111111 1134688999999999988776642 368
Q ss_pred CEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 82 DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 82 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
|++||+||..... ...+++...++.|+.++.++++++. +.....++|++||...+.+..
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------- 144 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR------------- 144 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC-------------
Confidence 9999999975421 2334566789999999999988752 111246899999965432221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
....|+.+|.+.+.+.+.++.+ .+++++.++||.+.++.... . +......... .++ ..+...+|
T Consensus 145 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~-~~~~~~~~~~--~~~-------~~~~~~~~ 211 (239)
T TIGR01831 145 -GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE--V-EHDLDEALKT--VPM-------NRMGQPAE 211 (239)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh--h-hHHHHHHHhc--CCC-------CCCCCHHH
Confidence 1346999999999888887654 38999999999998775421 1 1111111111 111 12456799
Q ss_pred HHHHHHHHHhcC
Q 005949 231 VAEAFECILHKG 242 (668)
Q Consensus 231 ~a~ai~~~~~~~ 242 (668)
+++++..++..+
T Consensus 212 va~~~~~l~~~~ 223 (239)
T TIGR01831 212 VASLAGFLMSDG 223 (239)
T ss_pred HHHHHHHHcCch
Confidence 999999988754
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=134.87 Aligned_cols=226 Identities=16% Similarity=0.118 Sum_probs=147.2
Q ss_pred CCCCCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|.+|++|++|||||++ .||+++++.|+++ +++|++.+|.... ...+.+... ...+..+.+|++|.+++..++.
T Consensus 1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLPCDVAEDASIDAMFA 76 (262)
T ss_pred CcccCCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhc--cCCceEeecCCCCHHHHHHHHH
Confidence 7777789999999985 8999999999999 6788877764210 111111111 1245678999999999887763
Q ss_pred c-----CCCCEEEEcCccCCcc---------cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~ 142 (668)
. .++|++||+||..... .+.+++...+++|+.+...+.+++... ..-.++|++||.......
T Consensus 77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~--- 153 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI--- 153 (262)
T ss_pred HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCC---
Confidence 2 3589999999964321 122234467788999988888776432 112589999986542111
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
.....|+.+|...+.+.+..+.+ +++++..+.||.+-.+................... +
T Consensus 154 -----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p----- 215 (262)
T PRK07984 154 -----------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--P----- 215 (262)
T ss_pred -----------CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcC--C-----
Confidence 11346999999999999998765 37999999999887642110000111111111111 1
Q ss_pred CceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+...+|++.+++.++.... .++.+.+.++
T Consensus 216 --~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 216 --IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred --CcCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 1135678999999999886532 4556666655
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.1e-14 Score=138.34 Aligned_cols=208 Identities=14% Similarity=0.170 Sum_probs=135.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC------
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE------ 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~------ 79 (668)
||+||||||+|+||++++++|+++ +++|++++|... ..+..+.. ....+++++.+|++|.+.+..+++..
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~-~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTEN-KELTKLAE-QYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCch-HHHHHHHh-ccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 368999999999999999999998 678888888542 11111111 11346888999999999988776421
Q ss_pred -C--CCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 80 -S--IDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 80 -~--~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
+ ..++||+||.... ..+.++....+++|+.++..+++.+. +.+..+++|++||...+..
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------- 147 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP--------- 147 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC---------
Confidence 1 2278999987432 22233455677889888666665443 3222468999999765322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCC-----CChHHHHHHHHHcCCCceeec
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 217 (668)
..+...|+.+|...|.+++.++.+ .++++..++||.+-.+.... ...... ....... ..
T Consensus 148 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~-----~~ 216 (251)
T PRK06924 148 -----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTN-LDRFITL-----KE 216 (251)
T ss_pred -----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchH-HHHHHHH-----hh
Confidence 223457999999999999988754 36889999999886553210 000000 0010000 00
Q ss_pred CCCceEeceeHHHHHHHHHHHHhc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
. ..+...+|+|++++.++..
T Consensus 217 ~----~~~~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 217 E----GKLLSPEYVAKALRNLLET 236 (251)
T ss_pred c----CCcCCHHHHHHHHHHHHhc
Confidence 0 1256889999999988876
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-14 Score=141.55 Aligned_cols=194 Identities=14% Similarity=0.115 Sum_probs=132.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|+++.+++.++++.. ++|+|||
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~ 90 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVC 90 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 579999999999999999999999754 24568899988876665543 5899999
Q ss_pred cccccCCC---CccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP---NVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 438 ~a~~~~~~---~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+||..... ..+...++....+++|+.++.++++++.. .+.+++++||...+.+. +
T Consensus 91 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------------------~ 152 (255)
T PRK05717 91 NAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------------------P 152 (255)
T ss_pred CCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC------------------C
Confidence 99976210 00112344567889999999999999964 23467888886544211 1
Q ss_pred CCCcchhhHHHHHHHHHhccCee--EeEEeeeecCCCCChhh---HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 511 TGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN---FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
..+.|+.+|...|.+++.+...+ ++++..++|+.+.++.. .................+...+|++.++..++...
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 232 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ 232 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 23579999999999988864332 48999999998887631 00001000000111234667899999999888643
Q ss_pred ----CCceeeecCC
Q 005949 586 ----LRGIWNFTNP 595 (668)
Q Consensus 586 ----~~g~~ni~~~ 595 (668)
.+.++.+.++
T Consensus 233 ~~~~~g~~~~~~gg 246 (255)
T PRK05717 233 AGFVTGQEFVVDGG 246 (255)
T ss_pred hcCccCcEEEECCC
Confidence 2445666443
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-13 Score=134.16 Aligned_cols=226 Identities=14% Similarity=0.049 Sum_probs=145.8
Q ss_pred CCCCCCeEEEEcC--CChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGA--AGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGg--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
..+++++++|||| ++.||.++++.|+++ +++|++.+|.......+.+.... ..++..+.+|+.|++++.+++..
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHH
Confidence 3356789999999 899999999999998 67888887643111112211111 22567899999999998877632
Q ss_pred ----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|++||+||.... ...+++....+++|+.++..+.+.+... ..-.++|++|+....+
T Consensus 80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-------- 151 (256)
T PRK07889 80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-------- 151 (256)
T ss_pred HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc--------
Confidence 469999999997531 1122334457899999998888766531 1125788887643211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
......|+.+|...+.+.+..+.+ +|+++..+.||.+-.+......-........... .++ .
T Consensus 152 -------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~------~ 216 (256)
T PRK07889 152 -------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDER--APL------G 216 (256)
T ss_pred -------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhc--Ccc------c
Confidence 011346999999999999987765 4799999999998776421100001111111111 111 1
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
+.+...+|+|++++.++.... .++.+.+.++
T Consensus 217 ~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 217 WDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred cccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 135678999999999887532 4556666544
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-14 Score=143.31 Aligned_cols=200 Identities=14% Similarity=0.055 Sum_probs=137.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|+|
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l 98 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM 98 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence 579999999999999999999999854 24568999998888877753 68999
Q ss_pred EEcccccCCCC---ccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN---VDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 436 ih~a~~~~~~~---~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
||+||....+. .+...++....+++|+.++.++++++... ..+++++||.....+.
T Consensus 99 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------------- 162 (280)
T PLN02253 99 VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG---------------- 162 (280)
T ss_pred EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC----------------
Confidence 99999762110 11223456778999999999999988642 2367777776432110
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--------HHHhhcc-----cceeecCCCcccH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRY-----NKVVNIPNSMTVL 571 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~-----~~~~~~~~~~~~v 571 (668)
+....|+.+|...|.+++.+.. ..++++..++|+.+..+... ....... ...........+.
T Consensus 163 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (280)
T PLN02253 163 --LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTV 240 (280)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCH
Confidence 1124799999999999988643 35799999999988655210 0000000 0000111234679
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCCCccCHH
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNPGVVSHN 601 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~~~~s~~ 601 (668)
+|+|++++.++... .+..+++.++...+..
T Consensus 241 ~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~ 274 (280)
T PLN02253 241 DDVANAVLFLASDEARYISGLNLMIDGGFTCTNH 274 (280)
T ss_pred HHHHHHHHhhcCcccccccCcEEEECCchhhccc
Confidence 99999999998643 3567888776554433
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-14 Score=145.25 Aligned_cols=196 Identities=13% Similarity=0.053 Sum_probs=133.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+++|||||+|+||++++++|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~ 86 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHL 86 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999854 23678999999988887764 5799
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHH----HHcC-------CcEEEEecceeEeecCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHG-------ILMMNYATGCIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~-------~~~v~~sS~~vy~~~~~~p~~~~~~~ 502 (668)
|||+||....... .....+....+++|+.|+.++++++ .+.+ .+++++||...+.+.
T Consensus 87 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 155 (287)
T PRK06194 87 LFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP----------- 155 (287)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-----------
Confidence 9999998721111 1223445567889999999977774 3322 257777887655221
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhccC-----eeEeEEeeeecCCCCChhhHHHHhhccccee-----ecCCCcccHh
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVV-----NIPNSMTVLD 572 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~v~ 572 (668)
+..+.|+.+|...|.+++.+.. ..++++..+.|+.+..+ +.....+.+.. ....++.|++
T Consensus 156 -------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T PRK06194 156 -------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG---IWQSERNRPADLANTAPPTRSQLIAQ 225 (287)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc---cccccccCchhcccCccccchhhHHH
Confidence 2236799999999999887643 23577777777655432 22222222111 1223678888
Q ss_pred hHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCC
Q 005949 573 ELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPE 614 (668)
Q Consensus 573 D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~ 614 (668)
|++..+.... .++..|+++.+.+.++..
T Consensus 226 ~~~~~~~~~~--------------~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 226 AMSQKAVGSG--------------KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred HHHHhhhhcc--------------CCCHHHHHHHHHHHHHcC
Confidence 8887654221 178999999988876543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.8e-14 Score=140.02 Aligned_cols=225 Identities=18% Similarity=0.162 Sum_probs=147.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|. +++++++||||+|+||+++++.|+++ +++|++++|... ....+... ...++..+.+|+.|.+.+.++++.
T Consensus 1 m~-~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (262)
T TIGR03325 1 MR-LKGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAA--GLQELEAA-HGDAVVGVEGDVRSLDDHKEAVARCV 74 (262)
T ss_pred CC-cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHhh-cCCceEEEEeccCCHHHHHHHHHHHH
Confidence 53 56789999999999999999999998 688998888542 12222111 123578899999999888776643
Q ss_pred ---CCCCEEEEcCccCCcc-----ccc----CChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcC
Q 005949 79 ---ESIDTIMHFAAQTHVD-----NSF----GNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~-----~~~----~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|++||+||..... ... +++...+++|+.++..+++++...- .-.++|++||...+.+..
T Consensus 75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~---- 150 (262)
T TIGR03325 75 AAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG---- 150 (262)
T ss_pred HHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC----
Confidence 4689999999964211 111 1345788999999999998886521 125788888865432211
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCCh--HH----HH-HHHHHcCCCcee
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKL--IP----KF-ILLAMRGLPLPI 215 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~--~~----~~-~~~~~~~~~~~~ 215 (668)
....|+.+|...+.+++.++.++ .+++..+.||.+..+...+... .. .+ .....+. ..+
T Consensus 151 ----------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p- 218 (262)
T TIGR03325 151 ----------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP- 218 (262)
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-
Confidence 13469999999999999988765 3888999999998764321100 00 00 0010110 111
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcCC----CCceEEEcCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKGE----VGHVYNVGTK 253 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~----~~~~~ni~~~ 253 (668)
...+...+|++.+++.++..+. .++++.+.+|
T Consensus 219 ------~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 219 ------IGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred ------CCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 1135577899999887775421 3556666544
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-14 Score=142.93 Aligned_cols=195 Identities=18% Similarity=0.149 Sum_probs=138.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
.|+++||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i 125 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL 125 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999854 24567899988888777653 68
Q ss_pred CEEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 433 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|+|||+||.... +..+...++....+++|+.++.++++++... +.++|++||...|.+.
T Consensus 126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------------- 189 (290)
T PRK06701 126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------------- 189 (290)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC----------------
Confidence 999999997511 0111223344667899999999999999763 3478888888766321
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh---HHHHhhc-ccceeecCCCcccHhhHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN---FITKISR-YNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~---~~~~~~~-~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
.....|+.+|...+.+++.+... .++++..++++.++.+.. +...... ...... ...+.+.+|+|++++.
T Consensus 190 --~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~ 266 (290)
T PRK06701 190 --ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTP-MQRPGQPEELAPAYVF 266 (290)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCC-cCCCcCHHHHHHHHHH
Confidence 11246999999999998887543 489999999998887631 0000000 001111 2346789999999999
Q ss_pred HHhcc----CCceeeecCCC
Q 005949 581 MAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~~ 596 (668)
++... .+.++++.++.
T Consensus 267 ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 267 LASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HcCcccCCccCcEEEeCCCc
Confidence 98753 34577777654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=140.64 Aligned_cols=195 Identities=15% Similarity=0.119 Sum_probs=134.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||.++++.|+++|++| .++.+|++|++++.++++.+ ++|+|
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 85 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL 85 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999864 25678999999998888765 68999
Q ss_pred EEcccccCCCC--ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN--VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 436 ih~a~~~~~~~--~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
||+||...... .....+.....+++|+.++.++++.+.. .+. +++++||...+. +
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~ 147 (251)
T PRK07231 86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR------------------P 147 (251)
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC------------------C
Confidence 99999751101 1123345567788999998888877764 343 677778766552 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHH----HhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFIT----KISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~----~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.++.+.|+.+|...+.+++.+.. ..++++..++|+.+..+. .+.. ..............+.+++|+|++++
T Consensus 148 ~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 227 (251)
T PRK07231 148 RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAAL 227 (251)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 22346799999999988877642 348999999999886653 1111 00000000011235678999999999
Q ss_pred HHHhcc---C-CceeeecCCC
Q 005949 580 EMAKRN---L-RGIWNFTNPG 596 (668)
Q Consensus 580 ~~~~~~---~-~g~~ni~~~~ 596 (668)
.++... . +..+++.++.
T Consensus 228 ~l~~~~~~~~~g~~~~~~gg~ 248 (251)
T PRK07231 228 FLASDEASWITGVTLVVDGGR 248 (251)
T ss_pred HHhCccccCCCCCeEEECCCc
Confidence 999654 2 3345665543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-14 Score=142.00 Aligned_cols=194 Identities=12% Similarity=0.069 Sum_probs=132.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc-----CCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~ 440 (668)
++++||||+|+||++++++|+++|++| ..+.+|++|+++++++++.+ ++|+|||+||
T Consensus 4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag 83 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAG 83 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 589999999999999999999999864 35678999999988888754 6899999999
Q ss_pred ccCCC-Cccccccccccceehhhhhh----HHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 441 VTGRP-NVDWCESHKTDTIRTNVAGT----LTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 441 ~~~~~-~~~~~~~~~~~~~~~Nv~~~----~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
..... ..+...++....+++|+.++ ..++..+++.+. +++++||...+.. .+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~ 145 (273)
T PRK06182 84 YGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY------------------TPLGAW 145 (273)
T ss_pred cCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC------------------CCCccH
Confidence 76210 11123345677788999885 445556666664 6778887543210 112256
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh-H-HHHhhcccce-------------e---ecCCCcccHhh
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-F-ITKISRYNKV-------------V---NIPNSMTVLDE 573 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-~-~~~~~~~~~~-------------~---~~~~~~~~v~D 573 (668)
|+.+|...+.+.+.+. ...++++.+++|+.+..+.. . ...+...... . .....+...+|
T Consensus 146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (273)
T PRK06182 146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSV 225 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence 9999999999876542 34689999999999987742 1 1111110000 0 00124567889
Q ss_pred HHHHHHHHHhcc-CCceeeecCC
Q 005949 574 LLPISIEMAKRN-LRGIWNFTNP 595 (668)
Q Consensus 574 ~a~~~~~~~~~~-~~g~~ni~~~ 595 (668)
+|++++.++.+. ....|+++.+
T Consensus 226 vA~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 226 IADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred HHHHHHHHHhCCCCCceeecCcc
Confidence 999999998865 4457777653
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-14 Score=140.34 Aligned_cols=194 Identities=15% Similarity=0.108 Sum_probs=135.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+++++||||+|+||++++++|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999753 34678899998888877753 479
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||....... ..........+++|+.++.++++++. +.+. +++++||...+.+.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~---------------- 146 (250)
T TIGR03206 83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS---------------- 146 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC----------------
Confidence 99999996521111 11122335568899999999988885 3343 78888887666332
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHHHHhhcc----cce-----eec-CCCcccHhhH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRY----NKV-----VNI-PNSMTVLDEL 574 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~----~~~-----~~~-~~~~~~v~D~ 574 (668)
.....|+.+|.+.+.+++.+.+. .++++..++|+.++++.. ..+... ... ... ..-+...+|+
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 222 (250)
T TIGR03206 147 --SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALL--DDICGGAENPEKLREAFTRAIPLGRLGQPDDL 222 (250)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhH--HhhhhccCChHHHHHHHHhcCCccCCcCHHHH
Confidence 12256999999999888876433 489999999999988741 111100 000 000 1134568999
Q ss_pred HHHHHHHHhcc----CCceeeecCCC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
|+++..++..+ .+.++++.++.
T Consensus 223 a~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 223 PGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 99999998754 35688887653
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-13 Score=134.42 Aligned_cols=227 Identities=16% Similarity=0.109 Sum_probs=146.7
Q ss_pred CCCCCCCeEEEEcC--CChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGA--AGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGg--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..++++++||||| ++.||+++++.|+++ +++|++..|.... ..++.+... ......+.+|+.|.+++.+++.
T Consensus 1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 1 MGFLQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAE--LDSELVFRCDVASDDEINQVFA 76 (261)
T ss_pred CCccCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhc--cCCceEEECCCCCHHHHHHHHH
Confidence 77788899999997 679999999999999 6788877653211 111111111 1234578999999999887763
Q ss_pred c-----CCCCEEEEcCccCCcc---------cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~ 141 (668)
. .++|++||+||..... ...+++...+++|+.++..+.+.+... ..-.++|++||...+...
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~-- 154 (261)
T PRK08690 77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI-- 154 (261)
T ss_pred HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC--
Confidence 2 3699999999975421 111223456788998888877654431 112589999986653221
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
.....|+.+|...+.+.+.++.+ +++++..+.||.|-.+................+. .++
T Consensus 155 ------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~--- 217 (261)
T PRK08690 155 ------------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAH--NPL--- 217 (261)
T ss_pred ------------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhc--CCC---
Confidence 12346999999999998887653 4899999999998776321100011111111111 111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+...+|+|+++..++.... .++.+-+.+|.
T Consensus 218 ----~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 218 ----RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred ----CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 135678999999999987532 45566666553
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-14 Score=139.84 Aligned_cols=190 Identities=16% Similarity=0.069 Sum_probs=133.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc----------------------ccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------------YGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------------~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++++||||+|+||+.+++.|+++|++|. ++.+|+.|.+++.++++.. ++|+||
T Consensus 8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 87 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALV 87 (239)
T ss_pred CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEE
Confidence 5799999999999999999999998652 3347888888887777753 579999
Q ss_pred EcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+++...... .....+.....++.|+.++.++++++.+ .+. +++++||...++.. +
T Consensus 88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------~ 149 (239)
T PRK12828 88 NIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG------------------P 149 (239)
T ss_pred ECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC------------------C
Confidence 9999651000 1112233345678999999999998853 344 67777887655221 2
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-- 585 (668)
+...|+.+|...+.++..+.. ..++++..++++.++++..-. .. .......+++++|+|++++.++.+.
T Consensus 150 ~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~--~~----~~~~~~~~~~~~dva~~~~~~l~~~~~ 223 (239)
T PRK12828 150 GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA--DM----PDADFSRWVTPEQIAAVIAFLLSDEAQ 223 (239)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh--cC----CchhhhcCCCHHHHHHHHHHHhCcccc
Confidence 335799999999888876532 358999999999999873211 00 0011124788999999999999754
Q ss_pred --CCceeeecCCCc
Q 005949 586 --LRGIWNFTNPGV 597 (668)
Q Consensus 586 --~~g~~ni~~~~~ 597 (668)
.+..+++.++..
T Consensus 224 ~~~g~~~~~~g~~~ 237 (239)
T PRK12828 224 AITGASIPVDGGVA 237 (239)
T ss_pred cccceEEEecCCEe
Confidence 245677766543
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-14 Score=140.94 Aligned_cols=194 Identities=12% Similarity=0.051 Sum_probs=136.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhc-CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~ 443 (668)
++++|+||+|+||.++++.|+++|++| .++.+|+++.+++.+.++.. ++|+|||+||...
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~ 89 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIAS 89 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 589999999999999999999999865 24457888988888888764 4799999999762
Q ss_pred CCC-ccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 444 RPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 444 ~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
... .+....+....+++|+.++.++++++.+. + .+++++||...+.+. .....|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------~~~~~y~ 151 (245)
T PRK07060 90 LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------------PDHLAYC 151 (245)
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------------CCCcHhH
Confidence 111 11223345566789999999999998763 2 367888887655221 1235799
Q ss_pred hhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH---HHHhhcccce-eecCCCcccHhhHHHHHHHHHhcc----
Q 005949 517 KTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---ITKISRYNKV-VNIPNSMTVLDELLPISIEMAKRN---- 585 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---~~~~~~~~~~-~~~~~~~~~v~D~a~~~~~~~~~~---- 585 (668)
.+|...|.+++.+.. ..++++..++|+.++++..- -.......-. ......+++.+|+++++..++..+
T Consensus 152 ~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~ 231 (245)
T PRK07060 152 ASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMV 231 (245)
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCc
Confidence 999999999888743 35799999999999887421 0000000000 011235789999999999999754
Q ss_pred CCceeeecCC
Q 005949 586 LRGIWNFTNP 595 (668)
Q Consensus 586 ~~g~~ni~~~ 595 (668)
.+..+++.++
T Consensus 232 ~G~~~~~~~g 241 (245)
T PRK07060 232 SGVSLPVDGG 241 (245)
T ss_pred cCcEEeECCC
Confidence 3556776654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4e-14 Score=138.94 Aligned_cols=179 Identities=20% Similarity=0.138 Sum_probs=126.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||++++++|+++|++| ..+.+|++|.+++.++++.+ ++|+|||
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 86 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFI 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 589999999999999999999999864 23456888877766655532 5799999
Q ss_pred cccccCCC-CccccccccccceehhhhhhHHHHHHHHH---cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD---HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 438 ~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~---~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
+||..... ...+..+++...+++|+.++.++++++.. .+.+++++||+....+ .+..+
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~------------------~~~~~ 148 (249)
T PRK06500 87 NAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG------------------MPNSS 148 (249)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC------------------CCCcc
Confidence 99976211 11233456677899999999999999974 3446777777542211 11236
Q ss_pred cchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH------------HHHhhcccceeecCCCcccHhhHHHHH
Q 005949 514 FYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF------------ITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~------------~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.|+.+|...|.+++.+.. ..++++.+++|+.+++|..- ...+.... . ..-+...+|+++++
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~va~~~ 224 (249)
T PRK06500 149 VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALV---P-LGRFGTPEEIAKAV 224 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcC---C-CCCCcCHHHHHHHH
Confidence 899999999999977643 35899999999999987420 01111110 0 11244689999999
Q ss_pred HHHHhc
Q 005949 579 IEMAKR 584 (668)
Q Consensus 579 ~~~~~~ 584 (668)
..++..
T Consensus 225 ~~l~~~ 230 (249)
T PRK06500 225 LYLASD 230 (249)
T ss_pred HHHcCc
Confidence 998864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.2e-14 Score=139.93 Aligned_cols=194 Identities=17% Similarity=0.159 Sum_probs=133.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|+|
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~v 85 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVL 85 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999854 34568999999988877754 68999
Q ss_pred EEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 436 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
||+||...... .....++....+++|+.++.++.+++. +.+. +++++||...+.+ .
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~------------------~ 147 (252)
T PRK06138 86 VNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG------------------G 147 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC------------------C
Confidence 99999762101 111233445668899999988777663 4444 6777777654421 1
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHHHhhcccc------eeecCCCcccHhhHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNK------VVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~------~~~~~~~~~~v~D~a~~~ 578 (668)
...+.|+.+|.+.+.+++.+.. ..+++++.++|+.++++. +++........ .......+++.+|+++++
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 227 (252)
T PRK06138 148 RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAA 227 (252)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 2236799999999999888743 248999999999998874 11111100000 001112477899999999
Q ss_pred HHHHhccC----CceeeecCC
Q 005949 579 IEMAKRNL----RGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~~----~g~~ni~~~ 595 (668)
+.++.++. +..+++.++
T Consensus 228 ~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 228 LFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred HHHcCchhcCccCCEEEECCC
Confidence 99997642 334555443
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=135.59 Aligned_cols=220 Identities=15% Similarity=0.159 Sum_probs=140.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHH----HHHhc--
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLV----NFLLI-- 77 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~----~~~~~-- 77 (668)
..++||||+|+||+++++.|+++ +++|+++.+... ..++.+.. .....++..+.+|++|.+.+ .+++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSA-AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcH-HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence 47999999999999999999998 678887755321 11111111 11123466789999998754 23321
Q ss_pred --c-CCCCEEEEcCccCCccc----ccC-----------ChHHHHHHHHHHHHHHHHHHHHcC---------CCcEEEEE
Q 005949 78 --T-ESIDTIMHFAAQTHVDN----SFG-----------NSFEFTKNNIYGTHVLLEACKVTG---------QIRRFIHV 130 (668)
Q Consensus 78 --~-~~~d~Vih~a~~~~~~~----~~~-----------~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~ 130 (668)
. .++|+|||+||...... ... +....+++|+.++..+.+++.... ...++|++
T Consensus 79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~ 158 (267)
T TIGR02685 79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL 158 (267)
T ss_pred HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence 1 36999999999643211 111 244678999999999988754321 12367777
Q ss_pred cCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHH
Q 005949 131 STDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLA 207 (668)
Q Consensus 131 SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~ 207 (668)
||..... +..+...|+.+|...+.+++.++.+ .|+++++++||.+..|...+ .......
T Consensus 159 ~s~~~~~--------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~----~~~~~~~ 220 (267)
T TIGR02685 159 CDAMTDQ--------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP----FEVQEDY 220 (267)
T ss_pred hhhhccC--------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc----hhHHHHH
Confidence 7754321 1223457999999999999998765 48999999999987664321 1111111
Q ss_pred HcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 208 MRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
... .++ + ..+...+|++++++.++.... .|+.+.+.++..
T Consensus 221 ~~~--~~~---~---~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~ 263 (267)
T TIGR02685 221 RRK--VPL---G---QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLS 263 (267)
T ss_pred HHh--CCC---C---cCCCCHHHHHHHHHHHhCcccCCcccceEEECCcee
Confidence 111 111 0 123578999999998886532 456667765543
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7e-14 Score=138.70 Aligned_cols=205 Identities=14% Similarity=0.100 Sum_probs=138.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+.++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 86 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDV 86 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 469999999999999999999999854 23567999999988887764 5899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcC--CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||...... .+...++....+++|+.++.++++++. +.+ .+++++||...+.
T Consensus 87 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~------------------ 148 (275)
T PRK05876 87 VFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV------------------ 148 (275)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc------------------
Confidence 999999762111 112233445667899999999999975 333 4688888876542
Q ss_pred CCCCCCcchhhHHH----HHHHHHhccCeeEeEEeeeecCCCCChhhH-HHHhhc---c--cc-----eeecCCCcccHh
Q 005949 508 PNFTGSFYSKTKAM----VEELLKEYDNVCTLRVRMPISSDLNNPRNF-ITKISR---Y--NK-----VVNIPNSMTVLD 572 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~----~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~-~~~~~~---~--~~-----~~~~~~~~~~v~ 572 (668)
+.++.+.|+.||.. +|.+..++.. .++++.+++|+.+.++..- ...+.. . .. ......++++++
T Consensus 149 ~~~~~~~Y~asK~a~~~~~~~l~~e~~~-~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (275)
T PRK05876 149 PNAGLGAYGVAKYGVVGLAETLAREVTA-DGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVD 227 (275)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhh-cCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHH
Confidence 22344789999997 5555555533 5899999999988876311 011100 0 00 001123578999
Q ss_pred hHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhc
Q 005949 573 ELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYI 611 (668)
Q Consensus 573 D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~ 611 (668)
|+|++++.++.++. .|.+. ......++.+...++.
T Consensus 228 dva~~~~~ai~~~~--~~~~~--~~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 228 DIAQLTADAILANR--LYVLP--HAASRASIRRRFERID 262 (275)
T ss_pred HHHHHHHHHHHcCC--eEEec--ChhhHHHHHHHHHHHH
Confidence 99999999998642 34443 3455666666665553
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=135.83 Aligned_cols=226 Identities=16% Similarity=0.089 Sum_probs=147.2
Q ss_pred CCCCCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCccCC----ccccCCCcCCCCeEEEEccCCCHHHHHH
Q 005949 1 MATYTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYCSN----LKNLIPSKASSNFKFVKGDIASADLVNF 74 (668)
Q Consensus 1 m~~~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 74 (668)
|-.+++|++|||||+ +.||.++++.|+++ +++|++..+...... ...+... ...+..+.+|++|.+++.+
T Consensus 1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~ 76 (258)
T PRK07370 1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEE 76 (258)
T ss_pred CcccCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHH
Confidence 545678899999986 79999999999999 677776654321111 1111111 1246688999999999887
Q ss_pred Hhcc-----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCC
Q 005949 75 LLIT-----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 75 ~~~~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~ 140 (668)
++.. .++|++||+||.... ....+++...+++|+.++..+.+++... ..-.++|++||.......
T Consensus 77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~- 155 (258)
T PRK07370 77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI- 155 (258)
T ss_pred HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC-
Confidence 7642 369999999996431 1123345678899999998888766431 112689999996532111
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeec
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (668)
.....|+.+|.+.+.+.+.++.++ ++++..+.||.|-.+......-.+.......... +
T Consensus 156 -------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p--- 217 (258)
T PRK07370 156 -------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKA--P--- 217 (258)
T ss_pred -------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcC--C---
Confidence 123469999999999999987654 7999999999997763210000011111111111 1
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
...+...+|++.++..++.... .|+.+.+.++
T Consensus 218 ----~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 218 ----LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred ----cCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 1135678999999999886432 3566666554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-13 Score=151.25 Aligned_cols=221 Identities=20% Similarity=0.213 Sum_probs=152.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
.++++|||||+|.||.+++++|+++ +++|++++|... .++.+... ...++..+.+|+.|++.+.+++.. .
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAE--GAKKLAEA-LGDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999 678998888532 22221111 123567789999999998877743 3
Q ss_pred CCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++|+|||+||.... +...+++...+++|+.++.++.+++... ..-.++|++||...+....
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 409 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP------------- 409 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC-------------
Confidence 68999999997531 1223345678999999999999877653 2236899999976643321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCC-hHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
+...|+.+|...+.+++.++.+. ++++..+.||.|.++...... .-........+..+ + ..+...+
T Consensus 410 -~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~ 479 (520)
T PRK06484 410 -PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP--L-------GRLGDPE 479 (520)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC--C-------CCCcCHH
Confidence 24569999999999999887654 799999999999887431100 00001111111111 1 1246789
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 230 DVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 230 D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
|++++++.++... ..|+.+.+.++
T Consensus 480 dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 480 EVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHHhCccccCccCcEEEECCC
Confidence 9999999888653 24667777655
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.2e-14 Score=139.55 Aligned_cols=197 Identities=13% Similarity=0.116 Sum_probs=132.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~ 92 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI 92 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999854 24678999998887766643 5799
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc-----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||.... +............+++|+.++.++++++... +. +++++||...+.+....
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~------------- 159 (259)
T PRK08213 93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE------------- 159 (259)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------------
Confidence 9999996511 1111223344567889999999999988654 43 67778886655332110
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHHHhhccc-ceeecCCCcccHhhHHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYN-KVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~-~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
..+...|+.+|+..|.+++.+.+ ..++++..++|+.+-.+. .++..+.+.. ..... .-+...+|+++++..+
T Consensus 160 -~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l 237 (259)
T PRK08213 160 -VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPL-GRLGDDEDLKGAALLL 237 (259)
T ss_pred -ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence 12346899999999999988743 357999999998776553 2222211110 00000 1233478999998888
Q ss_pred Hhcc----CCceeeecCC
Q 005949 582 AKRN----LRGIWNFTNP 595 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~ 595 (668)
+... .+..+++.++
T Consensus 238 ~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 238 ASDASKHITGQILAVDGG 255 (259)
T ss_pred hCccccCccCCEEEECCC
Confidence 8643 2445555543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-13 Score=134.97 Aligned_cols=232 Identities=17% Similarity=0.130 Sum_probs=146.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|+|.++|||| |+||++++++|. + +++|++++|... .+...... ....++.++.+|+.|.+.+..++..
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~ 74 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEE--NLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL 74 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence 3578999997 799999999995 6 689999888532 11111111 1123578899999999998877743
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCC---C--CcCCCCCCC--
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETD---E--DAVVGNHEA-- 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~---~--~~~~~~~e~-- 150 (668)
.++|+|||+||... ...++...+++|+.++.++++++... ..-.++|++||........ . ......+..
T Consensus 75 g~id~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T PRK06940 75 GPVTGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEEL 151 (275)
T ss_pred CCCCEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccc
Confidence 46999999999753 23567789999999999999887653 1113567777755432210 0 000000000
Q ss_pred --CC-------CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceee
Q 005949 151 --SQ-------LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 151 --~~-------~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~ 216 (668)
.+ ..+...|+.+|.+.+.+.+.++.+ +++++..+.||.+..+..... ............. .++
T Consensus 152 ~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~p~- 228 (275)
T PRK06940 152 LSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK--SPA- 228 (275)
T ss_pred cccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh--CCc-
Confidence 00 023457999999999999887654 379999999999988743110 0000111111111 111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+...+|+|+++..++.... .|+.+.+.++.
T Consensus 229 ------~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 229 ------GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred ------ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 135678999999998886432 45667776553
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.8e-14 Score=139.57 Aligned_cols=185 Identities=13% Similarity=0.040 Sum_probs=130.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
|++|+||||+|+||.++++.|+++|++| .++.+|++|++++.++++.+ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3589999999999999999999999864 24567899998888887764 689
Q ss_pred EEEEcccccCCCCcc-c-cccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVD-W-CESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~-~-~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||........ . ..+.....+++|+.++.++++.+.. .+.+++++||...+.+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 143 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG----------------- 143 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----------------
Confidence 999999976211111 1 1222345688999999999999853 2346788888766522
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhc--ccce---eecCCCcccHhhHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISR--YNKV---VNIPNSMTVLDELLPISI 579 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~--~~~~---~~~~~~~~~v~D~a~~~~ 579 (668)
..+.+.|+.+|...|.+++.+. ...++++..++|+.+..+. ...... +... ......+++++|+|++++
T Consensus 144 -~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~ 220 (263)
T PRK06181 144 -VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI--RKRALDGDGKPLGKSPMQESKIMSAEECAEAIL 220 (263)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc--chhhccccccccccccccccCCCCHHHHHHHHH
Confidence 1233679999999999887753 2358999999998887652 122211 1110 011126889999999999
Q ss_pred HHHhccCC
Q 005949 580 EMAKRNLR 587 (668)
Q Consensus 580 ~~~~~~~~ 587 (668)
.++++...
T Consensus 221 ~~~~~~~~ 228 (263)
T PRK06181 221 PAIARRKR 228 (263)
T ss_pred HHhhCCCC
Confidence 99986433
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-13 Score=135.55 Aligned_cols=208 Identities=18% Similarity=0.113 Sum_probs=137.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|+++||||+|+||.+++++|+++ +++|++++|... .+...... .....+.++.+|+.|.+.+.+++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDAD--GLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence 47999999999999999999998 678888887532 11111100 1112245678999999988776642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... +.+.++....+.+|+.++.++++++.. .+...++|++||...+.+..
T Consensus 77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~---------- 146 (272)
T PRK07832 77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP---------- 146 (272)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC----------
Confidence 358999999997532 123334567889999999999998642 12236899999965432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHH---hcCCCEEEEeeCceeCCCCCCCCh-----HHHHHHHHHcCCCceeecCCCce
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGR---SYGLPVITTRGNNVYGPNQFPEKL-----IPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|...+.+.+..+. .+++++++++||.+.++....... .......... ...
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 212 (272)
T PRK07832 147 ----WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFR 212 (272)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcc
Confidence 234699999988888776653 348999999999999875321000 0000000000 001
Q ss_pred EeceeHHHHHHHHHHHHhcC
Q 005949 223 RSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~ 242 (668)
...+..+|+|++++.+++.+
T Consensus 213 ~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 213 GHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 12468999999999999643
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=132.94 Aligned_cols=215 Identities=18% Similarity=0.172 Sum_probs=143.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++++|... ....+... ....+++++.+|+.|.+.+.++++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNEN--KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999998 678999888642 11111110 1123578899999999988776632
Q ss_pred -CCCCEEEEcCccCCccc--ccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccc-cCCCCCCcCCCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEV-YGETDEDAVVGNHEASQL 153 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~~~ 153 (668)
.++|.+||+++...... ..++....++.|+.+...+++.+... ..-.++|++||... ++..
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------------- 144 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS-------------- 144 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC--------------
Confidence 35799999998543211 11233456788999988888766543 11257999998644 2211
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
.+...|+.+|...+.+++.++.+. +++++++||++++++.... ..+ ... . .. . ..++..+|
T Consensus 145 ~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~~~----~~~---~--~~-~-----~~~~~~~~ 208 (238)
T PRK05786 145 PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-RNW----KKL---R--KL-G-----DDMAPPED 208 (238)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-hhh----hhh---c--cc-c-----CCCCCHHH
Confidence 124569999999999888877653 8999999999999874311 000 000 0 00 0 12456789
Q ss_pred HHHHHHHHHhcCC---CCceEEEcC
Q 005949 231 VAEAFECILHKGE---VGHVYNVGT 252 (668)
Q Consensus 231 ~a~ai~~~~~~~~---~~~~~ni~~ 252 (668)
+++++..++..+. .+..+.+.+
T Consensus 209 va~~~~~~~~~~~~~~~g~~~~~~~ 233 (238)
T PRK05786 209 FAKVIIWLLTDEADWVDGVVIPVDG 233 (238)
T ss_pred HHHHHHHHhcccccCccCCEEEECC
Confidence 9999998886532 344555543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.3e-13 Score=132.56 Aligned_cols=168 Identities=17% Similarity=0.074 Sum_probs=124.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc---cCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI---TESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~~~d 82 (668)
|++++||||+|+||++++++|+++ +++|++++|... ..+.+. ..+++++.+|+.|.+.+.+++. ..++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~--~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAA--ALAALQ----ALGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHH--HHHHHH----hccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 468999999999999999999988 678888887532 111111 1246789999999998887642 23689
Q ss_pred EEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCcc-ccCCCCCCcCCCCCCCCCC
Q 005949 83 TIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDE-VYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 83 ~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~ 153 (668)
+|||++|.... ..+.+++...++.|+.++.++++++... ....++|++||.. .++... .
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~ 140 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT------------G 140 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc------------C
Confidence 99999997532 1134456778999999999999888642 1135789998854 444321 1
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCC
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPN 193 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~ 193 (668)
.+...|+.+|...+.+++.++.++ +++++.++||.+..+.
T Consensus 141 ~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 141 TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM 181 (222)
T ss_pred CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence 112369999999999999887654 7899999999988764
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.2e-13 Score=130.76 Aligned_cols=222 Identities=15% Similarity=0.123 Sum_probs=144.6
Q ss_pred CCCCCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCcc---------CCccccCC--CcCCCCeEEEEccCC
Q 005949 1 MATYTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYC---------SNLKNLIP--SKASSNFKFVKGDIA 67 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~---------~~~~~~~~--~~~~~~~~~~~~Dl~ 67 (668)
|..+++++||||||+| .||.+++++|+++ +.+|++.++.... .....+.. .....++..+.+|+.
T Consensus 1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~ 78 (256)
T PRK12859 1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT 78 (256)
T ss_pred CCCcCCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence 5556688999999995 8999999999999 5677776432100 00001000 111235788999999
Q ss_pred CHHHHHHHhcc-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCcc
Q 005949 68 SADLVNFLLIT-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDE 134 (668)
Q Consensus 68 d~~~~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~ 134 (668)
|.+++.+++.. .++|+|||+||.... ....++....+++|+.++..+.+.+ ++.+ -.+||++||..
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~ 157 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQ 157 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccc
Confidence 99998877742 258999999997532 1223345567899999988886444 3222 46999999976
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC
Q 005949 135 VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGL 211 (668)
Q Consensus 135 vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~ 211 (668)
.+.+ ..+...|+.+|...+.+.+.++.+ ++++++.++||.+-.+... ..+........
T Consensus 158 ~~~~--------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~ 218 (256)
T PRK12859 158 FQGP--------------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLLPMF 218 (256)
T ss_pred cCCC--------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHHhcC
Confidence 4322 123457999999999999887754 4899999999998765321 11111111111
Q ss_pred CceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 212 PLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 212 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
+ ...+...+|+++++..++.... .|+.+.+.++
T Consensus 219 ~---------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 219 P---------FGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred C---------CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 1 1123468999999988876432 3555555543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.8e-14 Score=139.79 Aligned_cols=148 Identities=18% Similarity=0.163 Sum_probs=109.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc------CCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV------KPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~------~~d~Vih~ 438 (668)
+++|+||||+|+||.++++.|.++|++| ..+.+|++|.++++++++.+ ++|+|||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 4579999999999999999999999865 34568999998888777653 58999999
Q ss_pred ccccCCCCc-cccccccccceehhhhh----hHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 439 AGVTGRPNV-DWCESHKTDTIRTNVAG----TLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 439 a~~~~~~~~-~~~~~~~~~~~~~Nv~~----~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
||....... +...++....+++|+.| +.+++..+++.+. +++++||...+. +.++.
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~------------------~~~~~ 145 (277)
T PRK05993 84 GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV------------------PMKYR 145 (277)
T ss_pred CCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC------------------CCCcc
Confidence 997621111 11223345678899999 6667777777665 677877754331 12234
Q ss_pred CcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCCh
Q 005949 513 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNP 548 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~ 548 (668)
+.|+.||...|.++..+. ...++++..++|+.+..+
T Consensus 146 ~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 146 GAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 689999999999987753 346899999999887655
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-13 Score=131.76 Aligned_cols=226 Identities=17% Similarity=0.109 Sum_probs=147.6
Q ss_pred CCCCCCCeEEEEcC--CChhHHHHHHHHHHhCCCCEEEEEcCCCc-cCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGA--AGFIASHVCNRLIRNYPEYKIVVLDKLDY-CSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGg--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..++++++||||| ++.||.++++.|+++ +++|++.++... ...+..+.... .....+.+|++|++++.++++
T Consensus 1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~ 76 (260)
T PRK06997 1 MGFLAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEF--GSDLVFPCDVASDEQIDALFA 76 (260)
T ss_pred CCccCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhc--CCcceeeccCCCHHHHHHHHH
Confidence 66777899999996 679999999999999 678887655321 11111111111 123468899999999887774
Q ss_pred c-----CCCCEEEEcCccCCcc---------cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~ 142 (668)
. .++|++||+||..... ...+++...+++|+.++..+.+++... ..-.++|++||.......
T Consensus 77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~--- 153 (260)
T PRK06997 77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV--- 153 (260)
T ss_pred HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC---
Confidence 2 4699999999975321 122345567899999998888776542 123689999986542111
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
.....|+.+|...+.+.+.++.+ +++++..+.||.|-.+......-........... .++
T Consensus 154 -----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~---- 216 (260)
T PRK06997 154 -----------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--APL---- 216 (260)
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Ccc----
Confidence 11346999999999999988765 3799999999998765321000001111111111 111
Q ss_pred CceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
..+...+|+++++..++.... .++++.+.++
T Consensus 217 ---~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 217 ---RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred ---cccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence 125678999999999887532 4566666654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.4e-14 Score=140.09 Aligned_cols=200 Identities=15% Similarity=0.076 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++
T Consensus 5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i 84 (256)
T PRK09186 5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI 84 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence 589999999999999999999999854 13478999999988888764 37
Q ss_pred CEEEEcccccCC----CCccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR----PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 433 d~Vih~a~~~~~----~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
|+|||+|+.... +............+++|+.++..+++++.. .+. +++++||...+...... ..
T Consensus 85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------~~ 157 (256)
T PRK09186 85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFE-------IY 157 (256)
T ss_pred cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccch-------hc
Confidence 999999975410 011112233455677888888777666543 444 77888886544322110 12
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
++..... ...|+.||...|.+.+.+. ...++++..++|+.++.+. .+....... .....+++.+|+|+++
T Consensus 158 ~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~ 232 (256)
T PRK09186 158 EGTSMTS-PVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKC----CNGKGMLDPDDICGTL 232 (256)
T ss_pred cccccCC-cchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhc----CCccCCCCHHHhhhhH
Confidence 2222222 2479999999999887653 2468999999999887653 222211111 1123578899999999
Q ss_pred HHHHhcc---C-CceeeecCC
Q 005949 579 IEMAKRN---L-RGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~---~-~g~~ni~~~ 595 (668)
+.++.+. . +..+++.++
T Consensus 233 ~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 233 VFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred hheeccccccccCceEEecCC
Confidence 9999753 2 335555544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.6e-13 Score=132.81 Aligned_cols=221 Identities=16% Similarity=0.195 Sum_probs=141.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc-----CC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT-----ES 80 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 80 (668)
|+||||||+|.||+++++.|+++ +++|++.+|... .+...... ....++.++.+|++|.+++.+++.. .+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~ 76 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEE--NLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGG 76 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 48999999999999999999999 678888888542 11111110 0112578899999999998877642 36
Q ss_pred CCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 81 IDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 81 ~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
+|+|||+||.... +...++....+.+|+.++..+... ..+.....++|++||...+.+.
T Consensus 77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~----------- 145 (259)
T PRK08340 77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM----------- 145 (259)
T ss_pred CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC-----------
Confidence 9999999996431 112223344566777765544432 2221224689999997664322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC---------ChHHH-HHHHHHcCCCceeec
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---------KLIPK-FILLAMRGLPLPIHG 217 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~---------~~~~~-~~~~~~~~~~~~~~~ 217 (668)
.+...|+.+|...+.+.+.++.++ |+++..+.||.+-.+..... ..... ....... ..+
T Consensus 146 ---~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p--- 217 (259)
T PRK08340 146 ---PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE--RTP--- 217 (259)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc--cCC---
Confidence 124579999999999999988764 68899999998876643100 00000 0011111 011
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...+...+|+++++..++.... .|++..+.+|.
T Consensus 218 ----~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 218 ----LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred ----ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 1235678999999998887532 45566666553
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.2e-13 Score=132.05 Aligned_cols=224 Identities=15% Similarity=0.080 Sum_probs=146.4
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|++|++|||||++ .||+++++.|+++ +++|++.+|.... .....+.... .....+.+|++|.+++.+++..
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~--g~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESL--GSDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhc--CCceEEeCCCCCHHHHHHHHHHHH
Confidence 4468999999997 9999999999999 6888888774311 0111111111 1234689999999998877642
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||.... +...+++...+++|+.++.++++++... ..-.++|++||.......
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~------- 153 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM------- 153 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC-------
Confidence 469999999996431 1233445678899999999888766431 112589999986542211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.....|+.+|...+.+.+.++.++ |+++..+.||.+-.+......-.........+. .++ .
T Consensus 154 -------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~--~p~-------~ 217 (271)
T PRK06505 154 -------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRN--SPL-------R 217 (271)
T ss_pred -------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhc--CCc-------c
Confidence 113469999999999999987653 799999999999876421100000111111111 111 1
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+...+|++++++.++.... .++.+.+.++.
T Consensus 218 r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 218 RTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred ccCCHHHHHHHHHHHhCccccccCceEEeecCCc
Confidence 24578999999999886432 45666766553
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.4e-13 Score=133.43 Aligned_cols=224 Identities=15% Similarity=0.036 Sum_probs=145.8
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|++|++|||||+ +.||+++++.|+++ +++|++.+|.... ..+..+.... ... ..+.+|++|.+++.++++.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHH
Confidence 457899999997 79999999999999 6788888775210 1111111111 112 5789999999998777632
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||.... +...+++...+++|+.++..+.+++... ..-.++|++||.......
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------- 151 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV------- 151 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC-------
Confidence 468999999997431 1223345678899999999888766542 112589999986432111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.....|+.+|.+.+.+.+.++.+ +|+++..+.||.|-.+......-.......... ..++ .
T Consensus 152 -------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~pl-------~ 215 (274)
T PRK08415 152 -------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEI--NAPL-------K 215 (274)
T ss_pred -------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhh--hCch-------h
Confidence 11346999999999999998765 479999999999876532100000000000000 1111 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+...+|++++++.++... ..++.+.+.+|.
T Consensus 216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 2467899999999888643 246667666554
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8e-14 Score=136.49 Aligned_cols=184 Identities=14% Similarity=0.096 Sum_probs=126.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
|+|+||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 689999999999999999999999854 34567999998888777643 5899999
Q ss_pred cccccC--CCCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 438 ~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+||... .|..+...++....+++|+.++.++++++. +.+. +++++||...+. +..
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------~~~ 142 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------------PYA 142 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC------------------CCC
Confidence 999651 111122344556778999999766666654 4454 677777754331 112
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc---eeecCCCcccHhhHHHHHHHHHhc
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK---VVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
+.+.|+.+|...|.+.+.+. ...++++..++|+.+.++..-...+..... .......++..+|+|++++.++..
T Consensus 143 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 222 (248)
T PRK10538 143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATL 222 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcC
Confidence 34689999999999988763 235799999999988755311100100000 000122456789999999999874
Q ss_pred c
Q 005949 585 N 585 (668)
Q Consensus 585 ~ 585 (668)
+
T Consensus 223 ~ 223 (248)
T PRK10538 223 P 223 (248)
T ss_pred C
Confidence 3
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-13 Score=144.71 Aligned_cols=219 Identities=21% Similarity=0.148 Sum_probs=145.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
+++++|||||+|.||..++++|.++ +++|+++++......+..+.. ..+...+.+|++|.+.+..++.. .
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVAN---RVGGTALALDITAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999998 688988887432222211111 12346789999999988777642 2
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC---CCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG---QIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
++|+|||+||..... ...++....+++|+.++.++++++.... .-.+||++||...+.+..
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~------------ 351 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR------------ 351 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC------------
Confidence 689999999975421 2234456788999999999999887632 126899999976543221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
....|+.+|...+.+++.++.+ .++++..+.||.+-.+.... ++...+...+.. ..+ .......
T Consensus 352 --~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~---~~~~~~~~~~~~-~~l-------~~~~~p~ 418 (450)
T PRK08261 352 --GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA---IPFATREAGRRM-NSL-------QQGGLPV 418 (450)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc---cchhHHHHHhhc-CCc-------CCCCCHH
Confidence 1356999999888888877653 48999999999875432211 111111111100 011 1123467
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 230 DVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 230 D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
|+++++..++.... .++.++++++
T Consensus 419 dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 419 DVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred HHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 99999998886432 3667777643
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.4e-13 Score=151.32 Aligned_cols=172 Identities=16% Similarity=0.130 Sum_probs=128.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+..+++|||||+|+||++++++|+++ +++|++++|.... .+.+.. .....++.++.+|++|++.+.+++..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAA--AERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999998 6789888885421 111111 01123678999999999998877743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...++....+++|+.|+.++++++.. .+.-.++|++||...|....
T Consensus 389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------- 460 (582)
T PRK05855 389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-------- 460 (582)
T ss_pred hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC--------
Confidence 3589999999985432 22334557888999999998876542 23235899999988876543
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 193 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 193 (668)
+...|+.+|.+.+.+.+.++.+ +|++++++.||.|-.+.
T Consensus 461 ------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 502 (582)
T PRK05855 461 ------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI 502 (582)
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence 2457999999999998887654 48999999999987653
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.8e-13 Score=131.99 Aligned_cols=221 Identities=16% Similarity=0.088 Sum_probs=147.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc-C
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT-E 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-~ 79 (668)
+++++||||||+|.||.++++.|+++ +++|++++|... ..+.+.. .....++..+.+|++|.+.+.++++. .
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDAD--ALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence 45689999999999999999999998 678998888542 1111111 11134578899999999999888754 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|++||+||..... ...++....++.|+.+...+.+.+. +.+ ..++|++||.....+
T Consensus 81 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~------------- 146 (259)
T PRK06125 81 DIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENP------------- 146 (259)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCC-------------
Confidence 699999999974321 2223445678999999988887663 322 358999998543211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH----------HHHHHHHHcCCCceeecC
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI----------PKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 218 (668)
......|+.+|.+.+.+.+..+.+ .++++..+.||.+..+... ... ....+..... .
T Consensus 147 -~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~----- 216 (259)
T PRK06125 147 -DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML--TLLKGRARAELGDESRWQELLAG--L----- 216 (259)
T ss_pred -CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH--HHHHhhhhcccCCHHHHHHHhcc--C-----
Confidence 112346899999999999987653 4899999999988766310 000 0000000000 0
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
....+...+|++++++.++... ..|..+.+.+|.
T Consensus 217 --~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 217 --PLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred --CcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence 1113568899999998888643 245666776553
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-13 Score=135.81 Aligned_cols=201 Identities=14% Similarity=0.139 Sum_probs=135.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCC--CHHHHHHHhc-
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIA--SADLVNFLLI- 77 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~--d~~~~~~~~~- 77 (668)
+++++||||||+|+||.+++++|+++ +++|++++|.... ...+.. .....++.++.+|+. +.+.+.+++.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEK--LEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADT 85 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHH--HHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHH
Confidence 45789999999999999999999998 6788888886421 111111 111235677788886 5555544432
Q ss_pred --c--CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 78 --T--ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 --~--~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
+ .++|+|||+||.... ....+.+...+++|+.++.++++++. +.+ .++||++||...+....
T Consensus 86 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~---- 160 (247)
T PRK08945 86 IEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRA---- 160 (247)
T ss_pred HHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCC----
Confidence 1 368999999997532 12223456788999999888888764 333 68999999965432211
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
....|+.+|..+|.+++.++.+. ++++++++|+.+-++... .. .... +
T Consensus 161 ----------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~--~~--------~~~~------~--- 211 (247)
T PRK08945 161 ----------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA--SA--------FPGE------D--- 211 (247)
T ss_pred ----------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh--hh--------cCcc------c---
Confidence 23469999999999999877654 688888999987665220 00 0000 0
Q ss_pred eEeceeHHHHHHHHHHHHhcC
Q 005949 222 VRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~ 242 (668)
...+...+|+++++..++...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 212 PQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred ccCCCCHHHHHHHHHHHhCcc
Confidence 012567899999999887543
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.8e-14 Score=138.54 Aligned_cols=194 Identities=15% Similarity=0.157 Sum_probs=135.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||.+++++|+++|+++ .++..|+++++++.+++++. ++|+|
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 87 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGL 87 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999999853 34678899998888877753 68999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
||+||...........++....+++|+.++.++++++.. .+.+++++||...+.+ ..+
T Consensus 88 i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------------~~~ 149 (258)
T PRK08628 88 VNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG------------------QGG 149 (258)
T ss_pred EECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC------------------CCC
Confidence 999996521122222244556788999999999988854 2336777777654411 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhccc-------ceeecCCCcccHhhHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYN-------KVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~-------~~~~~~~~~~~v~D~a~~~~ 579 (668)
...|+.||...|.+++.+.. ..++++..++|+.++++.. ++....... ........+...+|+|++++
T Consensus 150 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 229 (258)
T PRK08628 150 TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAV 229 (258)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHH
Confidence 46899999999999988742 4689999999999999842 221111100 00111235677899999999
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
.++... .+..|.+.++
T Consensus 230 ~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 230 FLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred HHhChhhccccCceEEecCC
Confidence 998653 2345555443
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-12 Score=126.77 Aligned_cols=198 Identities=17% Similarity=0.208 Sum_probs=136.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-CCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-ESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~Vi 85 (668)
|+|+||||+|+||+++++.|+++++++.|+...|..... ....++.++++|++|.+.+.++.+. .++|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 489999999999999999999997778887776643211 1134688899999999988776543 4789999
Q ss_pred EcCccCCccc----------ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 86 HFAAQTHVDN----------SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 86 h~a~~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
|+||...... ..+.....+.+|+.++..+.+.+... ....+++++||.. +.... .+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~---------~~ 141 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD---------NR 141 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc---------CC
Confidence 9999764210 11223457788998888877766542 1235889988732 11100 01
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
..+...|+.+|...+.+.+.++.+ .++.+..+.||.+..+.... + ... .+ ...++.
T Consensus 142 ~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~------~----~~~--~~-------~~~~~~ 202 (235)
T PRK09009 142 LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP------F----QQN--VP-------KGKLFT 202 (235)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc------h----hhc--cc-------cCCCCC
Confidence 123457999999999999987754 37888899999988775321 0 000 00 112568
Q ss_pred HHHHHHHHHHHHhcC
Q 005949 228 CEDVAEAFECILHKG 242 (668)
Q Consensus 228 v~D~a~ai~~~~~~~ 242 (668)
.+|+++++..++...
T Consensus 203 ~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 203 PEYVAQCLLGIIANA 217 (235)
T ss_pred HHHHHHHHHHHHHcC
Confidence 899999999988765
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=135.54 Aligned_cols=191 Identities=13% Similarity=0.123 Sum_probs=129.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
|..++||||+|+||.++++.|+++|++|. .+.+|++|++++.++++.+ ++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 35799999999999999999999998652 3567899999888888764 57
Q ss_pred CEEEEcccccCCCCc--cccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV--DWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 433 d~Vih~a~~~~~~~~--~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~ 502 (668)
|+|||+||....... +....+....+++|+.++.++++++... +.+++++||...+.+.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~----------- 149 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA----------- 149 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-----------
Confidence 999999996511010 1112233467889999998888776543 2358888886544221
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHh
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~ 572 (668)
+. ....|+.+|...|.++..+.. ..++++..+||+.+++|.. +...+.... .. .-....+
T Consensus 150 -----~~-~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~ 219 (247)
T PRK09730 150 -----PG-EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNI---PM-QRGGQPE 219 (247)
T ss_pred -----CC-cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcC---CC-CCCcCHH
Confidence 10 113599999999998877642 3589999999999999841 111111111 11 1123689
Q ss_pred hHHHHHHHHHhcc----CCceeeecC
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTN 594 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~ 594 (668)
|++++++.++... .+..|++.+
T Consensus 220 dva~~~~~~~~~~~~~~~g~~~~~~g 245 (247)
T PRK09730 220 EVAQAIVWLLSDKASYVTGSFIDLAG 245 (247)
T ss_pred HHHHHHHhhcChhhcCccCcEEecCC
Confidence 9999999988653 233565554
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-13 Score=136.02 Aligned_cols=192 Identities=13% Similarity=0.052 Sum_probs=134.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~ 443 (668)
++++||||+|+||..+++.|+++|++| ..+.+|+++++++.+++++. ++|+|||+||...
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR 88 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 579999999999999999999999865 34567999999888887763 4799999999762
Q ss_pred CC-CccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 444 RP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 444 ~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
.. ......++....+++|+.++.++++++.. .+ .+++++||.... .+..+.+.|+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~------------------~~~~~~~~Y~~ 150 (252)
T PRK08220 89 MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH------------------VPRIGMAAYGA 150 (252)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc------------------cCCCCCchhHH
Confidence 10 11123445667889999999999999853 23 257777775432 11223478999
Q ss_pred hHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc--------------ceeecCCCcccHhhHHHHHHH
Q 005949 518 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN--------------KVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 518 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~--------------~~~~~~~~~~~v~D~a~~~~~ 580 (668)
+|...|.+++.+.. ..++++..++|+.++++... .+.... ........+.+.+|+|++++.
T Consensus 151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQR--TLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhh--hhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHH
Confidence 99999999887753 36899999999999988521 110000 000012357789999999999
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+.++.+.++
T Consensus 229 l~~~~~~~~~g~~i~~~gg 247 (252)
T PRK08220 229 LASDLASHITLQDIVVDGG 247 (252)
T ss_pred HhcchhcCccCcEEEECCC
Confidence 88643 3334555444
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.8e-14 Score=137.87 Aligned_cols=189 Identities=17% Similarity=0.149 Sum_probs=131.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------cccccccCChhHHHHHhhhc-----CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~ 442 (668)
++|+||||+|+||++++++|+++|++| +++.+|++|++++.++++.+ ++|+|||+||..
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~ 84 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG 84 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 479999999999999999999999854 46788999999998888864 689999999976
Q ss_pred CCCCc-cccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 443 GRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 443 ~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
..... ....++....+++|+.|+.++++++ ++.+. ++|++||...+.. .+....|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------------~~~~~~Y~ 146 (270)
T PRK06179 85 LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP------------------APYMALYA 146 (270)
T ss_pred CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC------------------CCCccHHH
Confidence 21111 1223445677899999999999985 44554 6777777654421 12236799
Q ss_pred hhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhccc--------------ce-eecCCCcccHhhHHHHH
Q 005949 517 KTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYN--------------KV-VNIPNSMTVLDELLPIS 578 (668)
Q Consensus 517 ~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--------------~~-~~~~~~~~~v~D~a~~~ 578 (668)
.+|...|.+++.+. ...++++.+++|+.+.++.. ....... .. ..........+|+|+.+
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 224 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD--ANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTV 224 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc--cccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHH
Confidence 99999999887753 23689999999998876531 1100000 00 00011234578999999
Q ss_pred HHHHhccC-Cceeee
Q 005949 579 IEMAKRNL-RGIWNF 592 (668)
Q Consensus 579 ~~~~~~~~-~g~~ni 592 (668)
+.++.++. ...|..
T Consensus 225 ~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 225 VKAALGPWPKMRYTA 239 (270)
T ss_pred HHHHcCCCCCeeEec
Confidence 99987654 344543
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-13 Score=134.53 Aligned_cols=196 Identities=14% Similarity=0.143 Sum_probs=134.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------------cccccccCChhHHHHHhhhc-----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------------EYGKGRLEDCSSLIADVQSV----- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------------~~~~~D~~d~~~~~~~l~~~----- 430 (668)
++++||||+|+||.++++.|+++|+++ .++.+|++|++++.++++.+
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 88 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFG 88 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence 589999999999999999999999863 13457899998888877754
Q ss_pred CCCEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 431 KPTHVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 431 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
++|+|||+||.... +.......+....+++|+.++..+++++... +.++++++|+.+... .
T Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~---~------------ 153 (257)
T PRK12744 89 RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF---T------------ 153 (257)
T ss_pred CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc---C------------
Confidence 68999999997511 1122234456678889999999999998754 235666644433211 0
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHH----HHhhc-c--cce-eecCCCcccHhhHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFI----TKISR-Y--NKV-VNIPNSMTVLDELL 575 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~----~~~~~-~--~~~-~~~~~~~~~v~D~a 575 (668)
+..+.|+.||.+.|.+++.+.+. .++++..++|+.+..+...- ..... . ... ......+.+.+|++
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 230 (257)
T PRK12744 154 ---PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIV 230 (257)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHH
Confidence 12367999999999999887432 47999999999887653110 00000 0 000 01112467899999
Q ss_pred HHHHHHHhcc---CCceeeecCCCc
Q 005949 576 PISIEMAKRN---LRGIWNFTNPGV 597 (668)
Q Consensus 576 ~~~~~~~~~~---~~g~~ni~~~~~ 597 (668)
+++..++... .+.++++.++..
T Consensus 231 ~~~~~l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 231 PFIRFLVTDGWWITGQTILINGGYT 255 (257)
T ss_pred HHHHHhhcccceeecceEeecCCcc
Confidence 9999999853 356888877643
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-13 Score=135.06 Aligned_cols=190 Identities=15% Similarity=0.100 Sum_probs=131.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||.++++.|+++|++| ..+.+|+++.+++.++++.. ++|
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVD 85 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999865 13446888888887777653 579
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... ...........+..|+.++.++++++... +. +++++||...+.+.
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~---------------- 149 (248)
T PRK05557 86 ILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN---------------- 149 (248)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC----------------
Confidence 9999999762100 11122344566789999999999998754 33 57777775332111
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.....|+.+|.+.|.+++.+. ...++++..++|+.+..+. .+........ ....+.+.+|+++++
T Consensus 150 --~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~va~~~ 223 (248)
T PRK05557 150 --PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQI----PLGRLGQPEEIASAV 223 (248)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 123679999999998887653 2357999999998775442 1121221111 123467899999999
Q ss_pred HHHHhcc----CCceeeecCC
Q 005949 579 IEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~ 595 (668)
..++... .+..|++.++
T Consensus 224 ~~l~~~~~~~~~g~~~~i~~~ 244 (248)
T PRK05557 224 AFLASDEAAYITGQTLHVNGG 244 (248)
T ss_pred HHHcCcccCCccccEEEecCC
Confidence 9888652 3568888765
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=135.85 Aligned_cols=194 Identities=14% Similarity=0.104 Sum_probs=132.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+.+++||||+|+||.++++.|+++|++| .++.+|++++++++++++.. ++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3579999999999999999999999854 34557899988887776653 57
Q ss_pred CEEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 433 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|+|||+||..... ..+...++....+++|+.++.++++++... +.+++++||....
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------------- 144 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------------- 144 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------------
Confidence 9999999976210 011223455677889999999999988653 2367888775321
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--HHHhhc-ccceeecCCCcccHhhHHHHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--ITKISR-YNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--~~~~~~-~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.+..+...|+.+|...+.+++.+.. ..++++..++|+.+..+..- ...... ...... ...+...+|++.++.
T Consensus 145 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~ 222 (256)
T PRK12743 145 -TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIP-LGRPGDTHEIASLVA 222 (256)
T ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCC-CCCCCCHHHHHHHHH
Confidence 1223446899999999999877643 35799999999998876410 000000 000111 123457899999999
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
.++... .+..+++.++
T Consensus 223 ~l~~~~~~~~~G~~~~~dgg 242 (256)
T PRK12743 223 WLCSEGASYTTGQSLIVDGG 242 (256)
T ss_pred HHhCccccCcCCcEEEECCC
Confidence 888643 2445555554
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=135.32 Aligned_cols=177 Identities=16% Similarity=0.151 Sum_probs=126.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+|+|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4789999999999999999999999753 35668999998888776653 4799
Q ss_pred EEEcccccCCCCcc--ccccccccceehhhhhhHHHHH----HHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVD--WCESHKTDTIRTNVAGTLTLAD----VCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~~~~--~~~~~~~~~~~~Nv~~~~~ll~----~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||....+... ....+....+++|+.|+.++++ ++++.+. +++++||...+.+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~----------------- 144 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG----------------- 144 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-----------------
Confidence 99999976211111 1224456778999999999887 4444443 6777888654421
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
.+....|+.||...|.++..+. +..++++..++|+.+.++.. .. .. ... ...+..+++++.++.++.+
T Consensus 145 -~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~--~~---~~--~~~-~~~~~~~~~a~~~~~~l~~ 215 (257)
T PRK07024 145 -LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT--AH---NP--YPM-PFLMDADRFAARAARAIAR 215 (257)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh--hc---CC--CCC-CCccCHHHHHHHHHHHHhC
Confidence 1123579999999999987763 44689999999999987632 10 00 000 1235688999999999976
Q ss_pred c
Q 005949 585 N 585 (668)
Q Consensus 585 ~ 585 (668)
.
T Consensus 216 ~ 216 (257)
T PRK07024 216 G 216 (257)
T ss_pred C
Confidence 4
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-11 Score=132.20 Aligned_cols=194 Identities=10% Similarity=0.049 Sum_probs=126.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc---------------------ccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------YGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|.||..+++.|.++|++|. .+..|++|+++++++++.. ++|+|||
T Consensus 211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~ 290 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVH 290 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 4799999999999999999999998652 3456899988887777653 5899999
Q ss_pred cccccCCCCc-cccccccccceehhhhhhHHHHHHHHHcC-----CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDHG-----ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-----~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||....... ..........+++|+.++.++++++.... .+++++||...+.+. ..
T Consensus 291 ~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~------------------~~ 352 (450)
T PRK08261 291 NAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN------------------RG 352 (450)
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC------------------CC
Confidence 9997621111 11233455678899999999999997632 367888886544211 12
Q ss_pred CCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-
Q 005949 512 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN- 585 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~- 585 (668)
...|+.+|...+.++..+. ...++++..+.|+.+--+.. +..................-.+|+++++.+++...
T Consensus 353 ~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~ 432 (450)
T PRK08261 353 QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPAS 432 (450)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhh
Confidence 3679999998777776653 23689999999887643210 00000000000000011123579999999888643
Q ss_pred ---CCceeeecCC
Q 005949 586 ---LRGIWNFTNP 595 (668)
Q Consensus 586 ---~~g~~ni~~~ 595 (668)
.+.+++++++
T Consensus 433 ~~itG~~i~v~g~ 445 (450)
T PRK08261 433 GGVTGNVVRVCGQ 445 (450)
T ss_pred cCCCCCEEEECCC
Confidence 2446666553
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.4e-13 Score=129.61 Aligned_cols=223 Identities=15% Similarity=0.064 Sum_probs=145.3
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|++|.+|||||++ .||.++++.|+++ +++|++.+|.... .....+.... .....+.+|++|++++.++++.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~--g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEI--GCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhc--CCceEEEccCCCHHHHHHHHHHHH
Confidence 5678999999997 8999999999998 6788877764211 1111121111 1224578999999998877742
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||.... +...+++...+++|+.++..+++.+... ..-.++|++||.......
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------- 154 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI------- 154 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC-------
Confidence 469999999986431 1223445678899999999988765431 112589999986543211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.....|+.+|...+.+.+.++.+ +++++..+.||.+-.+................... ++ .
T Consensus 155 -------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------~ 218 (260)
T PRK06603 155 -------PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATA--PL-------K 218 (260)
T ss_pred -------CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcC--Cc-------C
Confidence 11346999999999999988765 47999999999987653210000111111111111 11 1
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.+...+|++++++.++.... .++.+.+.+|
T Consensus 219 r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 219 RNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred CCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence 24678999999999987532 3556666654
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-12 Score=129.15 Aligned_cols=223 Identities=13% Similarity=0.028 Sum_probs=145.9
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|++|||||+ +.||.++++.|+++ +++|++.+|.... ..+..+... ......+.+|++|.+++.+++..
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEE--LDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHh--hccceEEecCcCCHHHHHHHHHHHH
Confidence 457899999998 59999999999999 6788888775321 011111111 12345789999999988877632
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+.+... ..-.++|++||......
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-------- 155 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-------- 155 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC--------
Confidence 368999999997431 1223445678899999999998876432 11258999998643211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
......|+.+|.+.+.+.+.++.+ +++++..+.||.+-.+.................. .++ .
T Consensus 156 ------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~ 220 (258)
T PRK07533 156 ------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAER--APL-------R 220 (258)
T ss_pred ------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhc--CCc-------C
Confidence 112346999999999999987765 4799999999998765321100011122222111 111 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
.+...+|++.+++.++... ..|+.+.+.++
T Consensus 221 r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 221 RLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred CCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence 2567899999999888643 24556666544
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-12 Score=129.93 Aligned_cols=224 Identities=14% Similarity=0.056 Sum_probs=147.3
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCc-cCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDY-CSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|++|++|||||+ +.||.++++.|+++ +++|++..|... ...++.+.... .....+.+|+.|.+++.+++..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHH
Confidence 456899999997 89999999999999 678887766421 11122221111 2355789999999998877642
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||.... +...+++...+++|+.++..+++.+... ..-.++|++||.......
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~------- 156 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM------- 156 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC-------
Confidence 368999999997531 1223445678899999999999876642 112689999986432211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.....|+.+|...+.+.+.++.+ +++++..+.||.+..+......-...... .... ..++ .
T Consensus 157 -------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~-~~~~-~~p~-------~ 220 (272)
T PRK08159 157 -------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILK-WNEY-NAPL-------R 220 (272)
T ss_pred -------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHH-HHHh-CCcc-------c
Confidence 12346999999999999988765 37999999999987642210000001111 0010 1111 1
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+...+|++++++.++.... .+..+.+.++.
T Consensus 221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred ccCCHHHHHHHHHHHhCccccCccceEEEECCCc
Confidence 24678999999999886432 45677777664
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-13 Score=130.85 Aligned_cols=170 Identities=15% Similarity=0.091 Sum_probs=121.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---CCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---ESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d 82 (668)
|++|+||||+|+||++++++|+++ +++|++++|.... ...+. ...++.++.+|+.|.+.+.++++. .++|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQ--DTALQ---ALPGVHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcc--hHHHH---hccccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 468999999999999999999998 6789999886432 11111 123577889999999888777643 3699
Q ss_pred EEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|||+||.... ....++....+.+|+.++.++.+++...- ...+++++||. +|..... +..
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~---------~~~ 142 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELP---------DGG 142 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccC---------CCC
Confidence 99999987532 11223344677889999998888775421 12578888874 2222110 111
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 193 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 193 (668)
+...|+.+|.+.+.+++.++.+ .++.+..++||.+-.+.
T Consensus 143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 2346999999999999988765 36889999999987664
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-12 Score=111.86 Aligned_cols=207 Identities=17% Similarity=0.166 Sum_probs=145.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||.|+||||.+|++++++.+++ +++|+++.|... .+.. .+++...+.|+.|.+++.+.+ .+.|+||.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~--K~~~------~~~~~i~q~Difd~~~~a~~l--~g~DaVIs 68 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNAS--KLAA------RQGVTILQKDIFDLTSLASDL--AGHDAVIS 68 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChH--hccc------cccceeecccccChhhhHhhh--cCCceEEE
Confidence 58999999999999999999999 677777777542 1111 256789999999999998888 89999998
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccc-cCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV-YGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
.-+.... +..+ --+.....|++..+.++ +.|++.++.++- |-... .. -.+.+.-|...|..++..
T Consensus 69 A~~~~~~-----~~~~---~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g-~r----LvD~p~fP~ey~~~A~~~ 134 (211)
T COG2910 69 AFGAGAS-----DNDE---LHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG-TR----LVDTPDFPAEYKPEALAQ 134 (211)
T ss_pred eccCCCC-----ChhH---HHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC-ce----eecCCCCchhHHHHHHHH
Confidence 8765421 1111 12233577888888877 899999987543 32222 11 234566677778888888
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-C
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~ 244 (668)
+|.+-. +..+..++|+.+-|+..|-|+....++. +.+..+.....|+ ++|...|.|-|++.-++++. .
T Consensus 135 ae~L~~-Lr~~~~l~WTfvSPaa~f~PGerTg~yr-------lggD~ll~n~~G~---SrIS~aDYAiA~lDe~E~~~h~ 203 (211)
T COG2910 135 AEFLDS-LRAEKSLDWTFVSPAAFFEPGERTGNYR-------LGGDQLLVNAKGE---SRISYADYAIAVLDELEKPQHI 203 (211)
T ss_pred HHHHHH-HhhccCcceEEeCcHHhcCCccccCceE-------eccceEEEcCCCc---eeeeHHHHHHHHHHHHhccccc
Confidence 885443 3334469999999999999977544442 2333333333333 68899999999999999876 3
Q ss_pred CceEEE
Q 005949 245 GHVYNV 250 (668)
Q Consensus 245 ~~~~ni 250 (668)
++.|-+
T Consensus 204 rqRftv 209 (211)
T COG2910 204 RQRFTV 209 (211)
T ss_pred ceeeee
Confidence 455544
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=134.85 Aligned_cols=186 Identities=17% Similarity=0.105 Sum_probs=123.8
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
||++|+||||+|+||..+++.|+++|++| ..+.+|++|.+++.++++.. +
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 45689999999999999999999999754 24557888888887776643 5
Q ss_pred CCEEEEcccccCCC--CccccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRP--NVDWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 432 ~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
+|+|||+||..... ..+....+....+++|+.++.++++++.+. +.+++++||...+.+..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------- 151 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP--------- 151 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---------
Confidence 89999999965210 111122334556889999998887654432 12478888765432110
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh----HHHHhhcccceeecCCCcccHhhH
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN----FITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
.....|+.+|...+.++..+.+. .++++.+++|+.+..+.. ............. ..-+...+|+
T Consensus 152 --------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~v 222 (248)
T PRK06947 152 --------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTP-LGRAGEADEV 222 (248)
T ss_pred --------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCC-CCCCcCHHHH
Confidence 01146999999999988876432 479999999999876631 0000000000000 1123568999
Q ss_pred HHHHHHHHhcc
Q 005949 575 LPISIEMAKRN 585 (668)
Q Consensus 575 a~~~~~~~~~~ 585 (668)
+++++.++.+.
T Consensus 223 a~~~~~l~~~~ 233 (248)
T PRK06947 223 AETIVWLLSDA 233 (248)
T ss_pred HHHHHHHcCcc
Confidence 99999988754
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-13 Score=128.02 Aligned_cols=200 Identities=10% Similarity=0.057 Sum_probs=139.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--CCCCEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT--ESIDTI 84 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~V 84 (668)
|+++||||+|.||+++++.|+++ +++|++++|... .+..+.. ..++.++.+|+.|.+.+.+++.. .++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRD--DLEVAAK---ELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH---hccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 37999999999999999999998 678888887532 1111111 11467889999999999887743 268999
Q ss_pred EEcCccCCc---------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 85 MHFAAQTHV---------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 85 ih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
||+||.... ....+++...+++|+.++.++++++... ..-.++|++||... .
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~------------------~ 135 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP------------------P 135 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------------C
Confidence 999984210 0023455678899999999999877542 11268999998540 0
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.+..+.. ... . .. +....+|+
T Consensus 136 ~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~-~--~~----------p~~~~~~i 192 (223)
T PRK05884 136 AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGL-S--RT----------PPPVAAEI 192 (223)
T ss_pred CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhc-c--CC----------CCCCHHHH
Confidence 1346999999999999988765 479999999998865421 000 0 00 01267899
Q ss_pred HHHHHHHHhcCC---CCceEEEcCCC
Q 005949 232 AEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 232 a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
++++..++.... .|+.+.+.+|.
T Consensus 193 a~~~~~l~s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 193 ARLALFLTTPAARHITGQTLHVSHGA 218 (223)
T ss_pred HHHHHHHcCchhhccCCcEEEeCCCe
Confidence 999998876432 45666666554
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.6e-12 Score=124.59 Aligned_cols=190 Identities=15% Similarity=0.081 Sum_probs=124.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
++++++|||||+|+||+++++.|+++ +++|++++|..... ... .. ......+.+|++|.+.+.+.+ .++|+
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~-~~~---~~-~~~~~~~~~D~~~~~~~~~~~--~~iDi 82 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINN-SES---ND-ESPNEWIKWECGKEESLDKQL--ASLDV 82 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhh-hhh---hc-cCCCeEEEeeCCCHHHHHHhc--CCCCE
Confidence 45689999999999999999999999 67888888754111 111 00 112357889999999998877 57999
Q ss_pred EEEcCccCCcc-cccCChHHHHHHHHHHHHHHHHHHHHcC------CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTG------QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 156 (668)
Q Consensus 84 Vih~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 156 (668)
+||+||..... ...+++...+++|+.++.++++++...- .-..++..||...+... ..
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~---------------~~ 147 (245)
T PRK12367 83 LILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA---------------LS 147 (245)
T ss_pred EEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC---------------CC
Confidence 99999974322 2344567889999999999998765421 11234444554322111 13
Q ss_pred ChhHHHHHHHHHHH---HHHH---HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 157 NPYSATKAGAEMLV---MAYG---RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 157 ~~Y~~sK~~~E~~~---~~~~---~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
..|+.||.+.+.+. ++.+ .+.++.+..+.||.+..+.. + ...+..+|
T Consensus 148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-----------------~----------~~~~~~~~ 200 (245)
T PRK12367 148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN-----------------P----------IGIMSADF 200 (245)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC-----------------c----------cCCCCHHH
Confidence 45999999986543 2221 12366666666665432210 0 01357899
Q ss_pred HHHHHHHHHhcCCC
Q 005949 231 VAEAFECILHKGEV 244 (668)
Q Consensus 231 ~a~ai~~~~~~~~~ 244 (668)
+|+.++.+++++..
T Consensus 201 vA~~i~~~~~~~~~ 214 (245)
T PRK12367 201 VAKQILDQANLGLY 214 (245)
T ss_pred HHHHHHHHHhcCCc
Confidence 99999988876543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-13 Score=135.92 Aligned_cols=183 Identities=14% Similarity=0.116 Sum_probs=123.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCC-CEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPE-YKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
|++++|||||++.||.++++.|+++ + ++|++.+|.... ...+... ....++.++.+|+.|.+.+.+++..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLK--AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4679999999999999999999998 6 788888875421 1111111 1123578889999999998777643
Q ss_pred --CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHH----HcC-CCcEEEEEcCccccCCCCC---Cc
Q 005949 79 --ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACK----VTG-QIRRFIHVSTDEVYGETDE---DA 143 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~~v~~SS~~vyg~~~~---~~ 143 (668)
.++|++||+||..... ...++....+++|+.++..+.+++. +.+ ...++|++||...+..... .+
T Consensus 78 ~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~ 157 (314)
T TIGR01289 78 SGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPP 157 (314)
T ss_pred hCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCC
Confidence 3699999999974321 1223455688999999877765543 321 1369999999877543210 00
Q ss_pred CC--C--------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeC
Q 005949 144 VV--G--------------NHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYG 191 (668)
Q Consensus 144 ~~--~--------------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G 191 (668)
.. . ..+..+..+...|+.||.+...+.+.++++ .++.++.++||.|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 158 KANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred cccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 00 0 011122334567999999988888877654 369999999999863
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-13 Score=137.17 Aligned_cols=194 Identities=15% Similarity=0.087 Sum_probs=136.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||.++++.|+++|++|. ++.+|++|++++.++++.. ++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 129 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL 129 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4799999999999999999999998652 3457888888887776654 57
Q ss_pred CEEEEcccccC--CCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 433 d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|++||+||... .+..+...++....+++|+.++.++++++... +.++|++||...+...
T Consensus 130 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~---------------- 193 (294)
T PRK07985 130 DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS---------------- 193 (294)
T ss_pred CEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC----------------
Confidence 99999999641 11112334566778999999999999998753 4478888887765221
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHH----HHhh-cccceeecCCCcccHhhHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFI----TKIS-RYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~----~~~~-~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
+....|+.+|...+.+++.+... .++++..++|+.+.++.... .... ....... ...+...+|+|++++
T Consensus 194 --~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~r~~~pedva~~~~ 270 (294)
T PRK07985 194 --PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP-MKRAGQPAELAPVYV 270 (294)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC-CCCCCCHHHHHHHHH
Confidence 12257999999999988887432 58999999999999874210 0000 0000001 113456899999999
Q ss_pred HHHhcc----CCceeeecCCC
Q 005949 580 EMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~ 596 (668)
.++... .+.++.+.++.
T Consensus 271 fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 271 YLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred hhhChhcCCccccEEeeCCCe
Confidence 998653 34566666653
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=132.80 Aligned_cols=172 Identities=16% Similarity=0.077 Sum_probs=125.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-cc-----------------cccccccCChhHHHHHhhhc-CCCEEEEcccccCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-PF-----------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTGR 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-~v-----------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~~ 444 (668)
++|+||||+|+||+++++.|+++|+ +| .++.+|+.|.+++.++++.. ++|+|||+||....
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 86 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRT 86 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 4799999999999999999999998 53 34567999999998888875 47999999997311
Q ss_pred CC--ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 445 PN--VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 445 ~~--~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
+. .....++....+++|+.++.++++++.. .+. +++++||...+.+ ..+.+.|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~------------------~~~~~~y~~ 148 (238)
T PRK08264 87 GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN------------------FPNLGTYSA 148 (238)
T ss_pred CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC------------------CCCchHhHH
Confidence 11 1122345566788999999999999763 333 5777888665521 123367999
Q ss_pred hHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 518 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 518 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
+|...|.+.+.+.. ..++++.+++|+.+.++.. .. .....+..+|+++.++..+..
T Consensus 149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~------~~-----~~~~~~~~~~~a~~~~~~~~~ 207 (238)
T PRK08264 149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA------AG-----LDAPKASPADVARQILDALEA 207 (238)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc------cc-----CCcCCCCHHHHHHHHHHHHhC
Confidence 99999998887643 2489999999998876521 00 011245578888888888775
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.8e-13 Score=132.51 Aligned_cols=194 Identities=17% Similarity=0.108 Sum_probs=130.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|+++|++| ..+.+|+++++++.++++.+ ++|+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999864 23567999999888877754 5899
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||.... +......++....+++|+.++..+++++... +.+++++||...+.+
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------- 145 (256)
T PRK08643 83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG----------------- 145 (256)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC-----------------
Confidence 9999986510 0111122344567889999998888777542 247788888654421
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--HHHHhhc--c-cce-------ee-cCCCcccH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISR--Y-NKV-------VN-IPNSMTVL 571 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~--~-~~~-------~~-~~~~~~~v 571 (668)
.+..+.|+.+|...|.+++.+. ...++++..++|+.+..+.. +....-. + ... .. ...-+...
T Consensus 146 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T PRK08643 146 -NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEP 224 (256)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCH
Confidence 1123679999999988877753 24689999999998887642 1111000 0 000 00 01134568
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCC
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+|+|.++..++... .+.++.+-++
T Consensus 225 ~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 225 EDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred HHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 89999999998643 3345555443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.7e-13 Score=133.38 Aligned_cols=193 Identities=15% Similarity=0.112 Sum_probs=136.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+++|+||||+|+||.++++.|.++|+++ .++..|++|.+++.++++.. ++|
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d 90 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3689999999999999999999999753 24568999998888776653 689
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+|||+||.......+...++....+++|+.++.++++++.. .+ .+++++||..... +
T Consensus 91 ~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------~ 152 (255)
T PRK06113 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------------K 152 (255)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC------------------C
Confidence 99999997621122223345566689999999999999863 22 3788888865331 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh-------hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
..+...|+.+|...+.+++.+.. ..++++..+.|+.+.-+. .+.....+. .. ..-+...+|+++++
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~d~a~~~ 228 (255)
T PRK06113 153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQH---TP-IRRLGQPQDIANAA 228 (255)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhc---CC-CCCCcCHHHHHHHH
Confidence 12335799999999999988642 357999999998765432 111111111 11 12356789999999
Q ss_pred HHHHhcc----CCceeeecCCCc
Q 005949 579 IEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~ 597 (668)
+.++... .+.++++.++..
T Consensus 229 ~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 229 LFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHcCccccCccCCEEEECCCcc
Confidence 9998753 355788877643
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.7e-13 Score=131.00 Aligned_cols=190 Identities=17% Similarity=0.179 Sum_probs=131.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||++++++|.++|+++ .++..|+++.+++.++++.. ++|
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRID 85 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999864 23567999998888888764 689
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
+|||+||....... .....+....+++|+.++.++++++.+. +.+++++||...+. +.
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------~~ 147 (245)
T PRK12937 86 VLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL------------------PL 147 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC------------------CC
Confidence 99999997521011 1123345567889999999999988754 23677777654331 12
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh-------hHHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
++.+.|+.+|...|.+++.+.. ..++++..++|+.+-.+. .....+.+..+ ...+.+.+|+++++.
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~~~~ 223 (245)
T PRK12937 148 PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAP----LERLGTPEEIAAAVA 223 (245)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCC----CCCCCCHHHHHHHHH
Confidence 2346899999999999887632 347899999997665432 11111111110 113446899999999
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
.++... .+..+++.++
T Consensus 224 ~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 224 FLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHcCccccCccccEEEeCCC
Confidence 988653 2456777653
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-13 Score=125.48 Aligned_cols=164 Identities=20% Similarity=0.248 Sum_probs=114.3
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCc-cCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-CSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~-~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++|||||+|.||..++++|.+++ ..+++++.|... ......... .....++.++.+|++|++.+.+++.. .
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 68999999999999999999997 678999998731 111111111 11244789999999999999998853 2
Q ss_pred CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc-ccCCCCCCcCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 80 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~~ 154 (668)
+++.|||+|+.... ....++....+.+++.|+++|.++..... ++.||++||+. ++|...
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g-------------- 145 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG-------------- 145 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT--------------
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc--------------
Confidence 67899999997542 22233345678999999999999998854 89999999955 456554
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCce
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNV 189 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v 189 (668)
...|+.++...|.+++.... .+.+++.+..+.+
T Consensus 146 -q~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W 178 (181)
T PF08659_consen 146 -QSAYAAANAFLDALARQRRS-RGLPAVSINWGAW 178 (181)
T ss_dssp -BHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred -hHhHHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence 34699999999999987654 5899999887754
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-13 Score=131.08 Aligned_cols=180 Identities=16% Similarity=0.075 Sum_probs=130.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc--CCCEEEEccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV--KPTHVFNAAG 440 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~--~~d~Vih~a~ 440 (668)
|.+++||||+|+||.++++.|+++|++| .++.+|++|++++.++++.. .+|.+||+||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 4579999999999999999999999854 34568999999999988875 4799999998
Q ss_pred ccCCCCcc---ccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 441 VTGRPNVD---WCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 441 ~~~~~~~~---~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
... ... ...++....+++|+.++.++++++..+ +.+++++||..... +.+....
T Consensus 81 ~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------------~~~~~~~ 140 (240)
T PRK06101 81 DCE--YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------------ALPRAEA 140 (240)
T ss_pred ccc--cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------------CCCCCch
Confidence 541 111 112233467899999999999999853 45677777754221 1122357
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccCCcee
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIW 590 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~g~~ 590 (668)
|+.+|...|.+.+.+. ...++++..++|+.++++..- ... ... ...+..+|+|+.++..++++...+|
T Consensus 141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~------~~~-~~~-~~~~~~~~~a~~i~~~i~~~~~~~~ 211 (240)
T PRK06101 141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD------KNT-FAM-PMIITVEQASQEIRAQLARGKSHIY 211 (240)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC------CCC-CCC-CcccCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999987764 346899999999999887311 000 000 1235689999999999987544444
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.5e-13 Score=132.33 Aligned_cols=199 Identities=14% Similarity=0.107 Sum_probs=134.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~ 443 (668)
++|+||||+|+||+++++.|.++|++| .++.+|++|++++.++++.. ++|+|||+||...
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 89 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSS 89 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccc
Confidence 589999999999999999999999865 35678999998887666543 5899999999541
Q ss_pred CC---CccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 444 RP---NVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 444 ~~---~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
.+ ......++....+++|+.++.++++++. +.+. +++++||...+... ......|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------------~~~~~~Y 152 (260)
T PRK06523 90 APAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL-----------------PESTTAY 152 (260)
T ss_pred cCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------------CCCcchh
Confidence 00 0112334556678899999988876653 3443 67788886543110 1134679
Q ss_pred hhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccc--------e-----eecC-CCcccHhhHHH
Q 005949 516 SKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNK--------V-----VNIP-NSMTVLDELLP 576 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~--------~-----~~~~-~~~~~v~D~a~ 576 (668)
+.+|...|.+++.+.. ..++++..++|+.+..+.. +......... . ...+ ..+...+|+++
T Consensus 153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~ 232 (260)
T PRK06523 153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE 232 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence 9999999998888643 3579999999999988742 1111100000 0 0011 13456789999
Q ss_pred HHHHHHhcc----CCceeeecCCCccC
Q 005949 577 ISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++..++... .+..+++.++...|
T Consensus 233 ~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 233 LIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHHhCcccccccCceEEecCCccCC
Confidence 999888642 35577777765443
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=134.48 Aligned_cols=148 Identities=17% Similarity=0.099 Sum_probs=109.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc-----CCCEEEEcc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAA 439 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a 439 (668)
|++++||||+|+||+++++.|+++|++| ..+.+|+++.+++.++++.+ ++|+|||+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4689999999999999999999999865 23567999998888877655 689999999
Q ss_pred cccCC-CCccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 440 GVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 440 ~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
|.... +..+...++....+++|+.++.++++++.. ...+++++||...+.+ .+..+.
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~ 142 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV------------------TPFAGA 142 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC------------------CCCccH
Confidence 97611 111222345566788999999999998743 2235677777543311 112367
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCCh
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNP 548 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~ 548 (668)
|+.+|...+.+...+. ...++++..++|+.+..+
T Consensus 143 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 143 YCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 9999999999877653 236899999999988654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.7e-13 Score=133.49 Aligned_cols=193 Identities=18% Similarity=0.104 Sum_probs=134.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++|+||||+|+||.++++.|+++|++| ..+..|+++++++.++++.. ++|+|||
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~ 95 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVN 95 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 589999999999999999999999865 24567999998888777654 6799999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... ......+....+++|+.++.++++++... + .+++++||...+.+ .+.
T Consensus 96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~ 157 (255)
T PRK06841 96 SAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA------------------LER 157 (255)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC------------------CCC
Confidence 999762101 11123344567889999999999998653 3 36778887643311 112
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc-----eeecCCCcccHhhHHHHHHHHHh
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-----VVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
...|+.+|...+.+++.+.. ..++++..++|+.+..+.. ........ .......+.+.+|++++++.++.
T Consensus 158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 235 (255)
T PRK06841 158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELG--KKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLAS 235 (255)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccc--ccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 25799999999988887643 2579999999988876531 11000000 00012357789999999999997
Q ss_pred cc----CCceeeecCCC
Q 005949 584 RN----LRGIWNFTNPG 596 (668)
Q Consensus 584 ~~----~~g~~ni~~~~ 596 (668)
.. .+.++++.++.
T Consensus 236 ~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 236 DAAAMITGENLVIDGGY 252 (255)
T ss_pred ccccCccCCEEEECCCc
Confidence 53 34566666553
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=127.42 Aligned_cols=183 Identities=14% Similarity=0.081 Sum_probs=129.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------ccccccCChhHHHHHhhhc-CCCEEEEcccccCCCCc-ccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------YGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTGRPNV-DWCESHK 454 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~~~~~-~~~~~~~ 454 (668)
|+++||||+|.||.++++.|.++ ++|. .+.+|++|+++++++++.. ++|+|||+||....... +...++.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~ 79 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDF 79 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHH
Confidence 58999999999999999999998 7663 3467999999999988876 78999999996511001 1223345
Q ss_pred ccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC
Q 005949 455 TDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN 531 (668)
Q Consensus 455 ~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~ 531 (668)
...+++|+.++.++++++... +..++++||.... .+.+....|+.+|...+.+++.+..
T Consensus 80 ~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~------------------~~~~~~~~Y~~sK~a~~~~~~~la~ 141 (199)
T PRK07578 80 NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD------------------EPIPGGASAATVNGALEGFVKAAAL 141 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC------------------CCCCCchHHHHHHHHHHHHHHHHHH
Confidence 566889999999999998753 3356666664422 1112336799999999998877533
Q ss_pred --eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-CCceeee
Q 005949 532 --VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN-LRGIWNF 592 (668)
Q Consensus 532 --~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni 592 (668)
..++++..+.|+.+-.+....... . ....++..+|+|++++.++++. .+++|++
T Consensus 142 e~~~gi~v~~i~Pg~v~t~~~~~~~~------~-~~~~~~~~~~~a~~~~~~~~~~~~g~~~~~ 198 (199)
T PRK07578 142 ELPRGIRINVVSPTVLTESLEKYGPF------F-PGFEPVPAARVALAYVRSVEGAQTGEVYKV 198 (199)
T ss_pred HccCCeEEEEEcCCcccCchhhhhhc------C-CCCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence 358999999998765442211110 1 1124677999999999999865 4456664
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.3e-13 Score=131.52 Aligned_cols=192 Identities=16% Similarity=0.131 Sum_probs=133.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++|+||||+|+||.+++++|+++|++| ..+.+|+++++++.++++.. ++|+||
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li 85 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILV 85 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 589999999999999999999999854 34568999998888777653 589999
Q ss_pred EcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 437 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|+||...... .+....+....+++|+.++.++++++.. .+ .+++++||...|...
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------------ 147 (248)
T TIGR01832 86 NNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG------------------ 147 (248)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC------------------
Confidence 9999762111 1112334556788999999999998854 22 367888887666321
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc----c--eeecCCCcccHhhHHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN----K--VVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~----~--~~~~~~~~~~v~D~a~~~~~ 580 (668)
.....|+.+|...+.+++.+.+ ..++++..++|+.+..+.. ..+.... . .......+...+|+|++++.
T Consensus 148 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 225 (248)
T TIGR01832 148 IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNT--QALRADEDRNAAILERIPAGRWGTPDDIGGPAVF 225 (248)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcch--hccccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 1124799999999999888743 3589999999998876631 1110000 0 00112357789999999999
Q ss_pred HHhcc---CCceeeecCC
Q 005949 581 MAKRN---LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~---~~g~~ni~~~ 595 (668)
++... ..|.+....+
T Consensus 226 l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 226 LASSASDYVNGYTLAVDG 243 (248)
T ss_pred HcCccccCcCCcEEEeCC
Confidence 99743 3354444443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5e-13 Score=129.80 Aligned_cols=190 Identities=13% Similarity=0.092 Sum_probs=130.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------cccccccCChhHHHHHhhhc----CCCEEEEcccccCCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------EYGKGRLEDCSSLIADVQSV----KPTHVFNAAGVTGRPN 446 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------~~~~~D~~d~~~~~~~l~~~----~~d~Vih~a~~~~~~~ 446 (668)
++|+||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+||......
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~ 83 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQP 83 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCC
Confidence 579999999999999999999999876 35567999988877666642 6799999999762100
Q ss_pred c-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 447 V-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 447 ~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
. .....+....+++|+.++.++.+++. +.+. +++++||..+|+. +..+.|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------------~~~~~Y~~sK~ 144 (234)
T PRK07577 84 LGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA-------------------LDRTSYSAAKS 144 (234)
T ss_pred hHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-------------------CCchHHHHHHH
Confidence 0 11234455678899999888877764 3444 6777887765421 11257999999
Q ss_pred HHHHHHHhccC---eeEeEEeeeecCCCCChhhH---------HHHhhcccceeecCCCcccHhhHHHHHHHHHhcc---
Q 005949 521 MVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---------ITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--- 585 (668)
Q Consensus 521 ~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--- 585 (668)
..|.+++.+.. ..++++..++|+.+..+..- ...+.... . .......+|+|.+++.++..+
T Consensus 145 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~a~~~~~l~~~~~~~ 220 (234)
T PRK07577 145 ALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI---P-MRRLGTPEEVAAAIAFLLSDDAGF 220 (234)
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC---C-CCCCcCHHHHHHHHHHHhCcccCC
Confidence 99998877532 35899999999888765310 00011100 0 112346789999999998753
Q ss_pred -CCceeeecCCC
Q 005949 586 -LRGIWNFTNPG 596 (668)
Q Consensus 586 -~~g~~ni~~~~ 596 (668)
.+..+++.++.
T Consensus 221 ~~g~~~~~~g~~ 232 (234)
T PRK07577 221 ITGQVLGVDGGG 232 (234)
T ss_pred ccceEEEecCCc
Confidence 34566665543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.9e-13 Score=130.56 Aligned_cols=177 Identities=17% Similarity=0.144 Sum_probs=126.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc--CCCEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV--KPTHV 435 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~--~~d~V 435 (668)
||+|+||||+|+||.++++.|+++|++| .++.+|++|++++.++++++ ++|+|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 5789999999999999999999999854 34567999998888887764 57999
Q ss_pred EEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 436 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
||++|..... ..+...++....+++|+.++.++++++.. .+. +++++||...+.+ .
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~ 142 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG------------------R 142 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC------------------C
Confidence 9999865211 11122334456788999999999988764 233 6777777542211 1
Q ss_pred CCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 510 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
.....|+.+|...+.+...+. ...++++..++|+.+.++.. ... .. ........+|+++.++.++.++
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~--~~~----~~--~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 143 ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT--AGL----KL--PGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh--hcc----CC--CccccCCHHHHHHHHHHHHhCC
Confidence 122579999999999888763 34689999999999987631 111 00 0112456899999999998864
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-13 Score=131.79 Aligned_cols=192 Identities=14% Similarity=0.120 Sum_probs=132.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|.++|++| .++.+|++|.+++.++++.. ++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999998753 34567888888888777653 589
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||..... ......+.....++.|+.++.++++++ ++.+. +++++||...+.+.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------------- 146 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---------------- 146 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC----------------
Confidence 999999976210 011223445567889999999986554 44444 77777776544211
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+....|+.+|...+.+++.+.. ..++++..++|+.+.++.. +...+.... ....+...+|+++++
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~va~~~ 220 (245)
T PRK12824 147 --FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQI----PMKRLGTPEEIAAAV 220 (245)
T ss_pred --CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcC----CCCCCCCHHHHHHHH
Confidence 1224799999999988877642 3579999999998887631 111111111 012344688999999
Q ss_pred HHHHhcc----CCceeeecCCCc
Q 005949 579 IEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~ 597 (668)
..++... .++++++.++..
T Consensus 221 ~~l~~~~~~~~~G~~~~~~~g~~ 243 (245)
T PRK12824 221 AFLVSEAAGFITGETISINGGLY 243 (245)
T ss_pred HHHcCccccCccCcEEEECCCee
Confidence 9888643 467888888753
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-13 Score=138.55 Aligned_cols=164 Identities=13% Similarity=0.038 Sum_probs=113.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~ 86 (322)
T PRK07453 7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDA 86 (322)
T ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccE
Confidence 579999999999999999999999854 23467999999888877653 4899
Q ss_pred EEEcccccCCC--CccccccccccceehhhhhhHHHHHHHHHc----C---CcEEEEecceeEeecC----CCCCCCC--
Q 005949 435 VFNAAGVTGRP--NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G---ILMMNYATGCIFEYDA----AHPEGSG-- 499 (668)
Q Consensus 435 Vih~a~~~~~~--~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~---~~~v~~sS~~vy~~~~----~~p~~~~-- 499 (668)
|||+||..... ....+.+..+..+++|+.|+.+|++++... + .++|++||...++... ..+....
T Consensus 87 li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~ 166 (322)
T PRK07453 87 LVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLG 166 (322)
T ss_pred EEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchh
Confidence 99999975210 112234556778999999999998888652 2 3788888876553211 0110000
Q ss_pred ----------CCC-CCCCCCCCCCCcchhhHHHHHHHHHhccC----eeEeEEeeeecCCCCC
Q 005949 500 ----------IGY-KEEDTPNFTGSFYSKTKAMVEELLKEYDN----VCTLRVRMPISSDLNN 547 (668)
Q Consensus 500 ----------~~~-~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~l~~~~~r~~~~~g 547 (668)
.+. ..+..+..|.+.|+.||++.+.++..+.+ ..++++..++|+.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 167 DLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred hhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 000 01122345668899999988777766543 2479999999999875
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.8e-13 Score=133.75 Aligned_cols=182 Identities=18% Similarity=0.122 Sum_probs=125.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc------CCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV------KPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~------~~d~ 434 (668)
|++++||||+|+||.+++++|+++|++| .++.+|++|.+++.+.++.+ ++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 4679999999999999999999999854 34567999988888777643 5799
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----c-CCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----H-GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||....... ....++....+++|+.++.++++++.. . +.+++++||...+.+.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------- 143 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ----------------- 143 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC-----------------
Confidence 9999997621111 112344567789999999999998853 2 3478888886443221
Q ss_pred CCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHh---hcccceeecCCCcccHhhHHHHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKI---SRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
...+.|+.||...+.++..+. ...++++..++|+.+..+.. ... .........+ ..+..+|++++++.++
T Consensus 144 -~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~--~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~~~ 219 (260)
T PRK08267 144 -PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAML--DGTSNEVDAGSTKRLG-VRLTPEDVAEAVWAAV 219 (260)
T ss_pred -CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccc--ccccchhhhhhHhhcc-CCCCHHHHHHHHHHHH
Confidence 113579999999998887763 23579999999987754421 100 0000000011 1344699999999999
Q ss_pred hcc
Q 005949 583 KRN 585 (668)
Q Consensus 583 ~~~ 585 (668)
++.
T Consensus 220 ~~~ 222 (260)
T PRK08267 220 QHP 222 (260)
T ss_pred hCC
Confidence 753
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.5e-13 Score=130.50 Aligned_cols=179 Identities=17% Similarity=0.141 Sum_probs=128.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.+++++|+++|++| .++.+|+++++++.++++.. ++|+
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI 87 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence 479999999999999999999999864 24567899998888887753 5799
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||....... +....+....+++|+.++.++++++.. .+. +++++||...+.+
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~------------------ 149 (239)
T PRK07666 88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG------------------ 149 (239)
T ss_pred EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC------------------
Confidence 9999997621111 112234456789999999999998864 333 5777777654422
Q ss_pred CCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
..+...|+.+|.+.+.+++.+. ...++++..++|+.+..+...-...... .+..++..+|+|++++.++.++
T Consensus 150 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-----~~~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 150 AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG-----NPDKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc-----CCCCCCCHHHHHHHHHHHHhCC
Confidence 1223579999999998887753 2368999999999888764321111111 1234567899999999999865
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.8e-13 Score=131.09 Aligned_cols=191 Identities=15% Similarity=0.110 Sum_probs=130.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccCC-
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGR- 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~- 444 (668)
++++||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|+|||+||....
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~ 86 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYG 86 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 589999999999999999999999865 35678999999888877754 68999999997511
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
+..+...++....+++|+.++.++++++.. .+ .++|++||...+. +.+..+.|+.+|
T Consensus 87 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~sK 148 (258)
T PRK06398 87 AIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA------------------VTRNAAAYVTSK 148 (258)
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc------------------CCCCCchhhhhH
Confidence 001112233445688999999999888854 23 4788888865442 122346899999
Q ss_pred HHHHHHHHhccCee--EeEEeeeecCCCCChhhHHHHhh--c-c-------------cceeecCCCcccHhhHHHHHHHH
Q 005949 520 AMVEELLKEYDNVC--TLRVRMPISSDLNNPRNFITKIS--R-Y-------------NKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 520 ~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~~~~~~~--~-~-------------~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
...|.+.+.+...+ .+++..+.|+.+-.+.. .... . + .... ....+...+|+|++++++
T Consensus 149 aal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~eva~~~~~l 225 (258)
T PRK06398 149 HAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLL--EWAAELEVGKDPEHVERKIREWGEMH-PMKRVGKPEEVAYVVAFL 225 (258)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCCccchHH--hhhhhccccCChhhhHHHHHhhhhcC-CcCCCcCHHHHHHHHHHH
Confidence 99999988764321 38999999987765531 1110 0 0 0000 012345688999999988
Q ss_pred Hhcc----CCceeeecCC
Q 005949 582 AKRN----LRGIWNFTNP 595 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~ 595 (668)
+... .+.++.+.++
T Consensus 226 ~s~~~~~~~G~~i~~dgg 243 (258)
T PRK06398 226 ASDLASFITGECVTVDGG 243 (258)
T ss_pred cCcccCCCCCcEEEECCc
Confidence 8643 3345555554
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.4e-13 Score=131.00 Aligned_cols=190 Identities=13% Similarity=0.071 Sum_probs=134.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|+++|+++ .++.+|++|++++.++++.. ++|+
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 87 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG 87 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 689999999999999999999999854 34567999999888877653 6899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||++|...... ...........++.|+.++.++++++... +.+++++||...+.+
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 149 (250)
T PRK12939 88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG------------------ 149 (250)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC------------------
Confidence 999999762111 11122344566789999999999988643 226778888654421
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.+....|+.+|...|.+++.+.. ..++++..++|+.+..+.. +....... .....+++.+|+++++
T Consensus 150 ~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 150 APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKG----RALERLQVPDDVAGAV 225 (250)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhc----CCCCCCCCHHHHHHHH
Confidence 11235799999999999987642 3579999999988766531 11111111 1123567899999999
Q ss_pred HHHHhcc----CCceeeecCC
Q 005949 579 IEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~ 595 (668)
+.++... .+..+++.++
T Consensus 226 ~~l~~~~~~~~~G~~i~~~gg 246 (250)
T PRK12939 226 LFLLSDAARFVTGQLLPVNGG 246 (250)
T ss_pred HHHhCccccCccCcEEEECCC
Confidence 9999753 3456777665
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.47 E-value=7e-13 Score=129.24 Aligned_cols=188 Identities=16% Similarity=0.099 Sum_probs=132.5
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
|+|||++|+||.++++.|+++|++| .++.+|++|++++++++++. ++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999854 24567899998888877664 58999
Q ss_pred EEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 436 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
||+||.... +..+.....+...+++|+.++.+++++|... +. +++++||...+.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------------ 142 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------------ 142 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------------------
Confidence 999997621 0112234556778899999999999998753 33 67777775433221
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
+..+.|+.+|...+.+++.+.+ ..++++..++|+.+.++.. +...+....+ ...+.+++|++++++.
T Consensus 143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~ 218 (239)
T TIGR01830 143 AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIP----LGRFGTPEEVANAVAF 218 (239)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCC----cCCCcCHHHHHHHHHH
Confidence 1235799999999988777633 3589999999988766531 1111111111 2246678999999998
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+.+||+.++
T Consensus 219 ~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 219 LASDEASYITGQVIHVDGG 237 (239)
T ss_pred HhCcccCCcCCCEEEeCCC
Confidence 88542 4568998764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.4e-13 Score=131.89 Aligned_cols=193 Identities=15% Similarity=0.089 Sum_probs=129.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc------CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV------KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~------~~d~V 435 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~l 85 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTV 85 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 579999999999999999999999864 23457888988888877764 28999
Q ss_pred EEcccccCC-------CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 436 FNAAGVTGR-------PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 436 ih~a~~~~~-------~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
||+|+.... +..+...++....+++|+.++.+++++|.. .+ .+++++||....
T Consensus 86 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--------------- 150 (253)
T PRK08642 86 VNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ--------------- 150 (253)
T ss_pred EECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc---------------
Confidence 999985310 011112334456789999999999999863 33 367777764321
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh---HHHHhhcc-cceeecCCCcccHhhHHH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FITKISRY-NKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~~~~~~~-~~~~~~~~~~~~v~D~a~ 576 (668)
.+..+.+.|+.+|...|.+++.+.+ ..++++..+.|+.+..+.. ........ ..... ...+...+|+++
T Consensus 151 ---~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~ 226 (253)
T PRK08642 151 ---NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTP-LRKVTTPQEFAD 226 (253)
T ss_pred ---CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCC-cCCCCCHHHHHH
Confidence 1123346899999999999998743 3579999999887654421 00000000 00011 124677899999
Q ss_pred HHHHHHhcc----CCceeeecCC
Q 005949 577 ISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~ 595 (668)
++..++... .+.++.+.++
T Consensus 227 ~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 227 AVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHcCchhcCccCCEEEeCCC
Confidence 999998643 3446666554
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1e-12 Score=125.40 Aligned_cols=173 Identities=16% Similarity=0.130 Sum_probs=118.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCc-cccCCCcCCCCeEEEEccCCCHHHHHHHhc-
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNL-KNLIPSKASSNFKFVKGDIASADLVNFLLI- 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 77 (668)
|..+.+|.|+||||+..||.+++..|.++ |..++++.|.... ... +.+.......++..+++|++|.++...+++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~ 84 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW 84 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence 34567899999999999999999999999 5655555544321 122 111122222269999999999999887752
Q ss_pred ----cCCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 78 ----TESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 78 ----~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
..++|++||+||...... ...+....+++|+.|+..+.+++- +.+ -.++|.+||+.-+-..+.
T Consensus 85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~---- 159 (282)
T KOG1205|consen 85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPF---- 159 (282)
T ss_pred HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCc----
Confidence 258999999999865221 122234688999998887776553 333 479999999766444321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEE----EeeCcee
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT----TRGNNVY 190 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i----lR~~~v~ 190 (668)
...|++||.+.+.+...++.+..-..++ +-||.|-
T Consensus 160 ----------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~ 198 (282)
T KOG1205|consen 160 ----------RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIE 198 (282)
T ss_pred ----------ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence 2369999999999999988776433333 4455443
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.4e-13 Score=130.06 Aligned_cols=192 Identities=13% Similarity=0.093 Sum_probs=127.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc-------------------------cccccCChhHHHHHhhhc--------
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------------------------GKGRLEDCSSLIADVQSV-------- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------------------------~~~D~~d~~~~~~~l~~~-------- 430 (668)
++++||||+|+||.++++.|++.|++|.+ +..|+++.+++...++..
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT 84 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence 57999999999999999999999987632 224677766555444321
Q ss_pred ---CCCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 431 ---KPTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 431 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
++|+|||+||...... .+...+.....+++|+.++..+++++... +.++|++||...+..
T Consensus 85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------- 151 (252)
T PRK12747 85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS------------- 151 (252)
T ss_pred CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-------------
Confidence 5899999999751111 11112233566779999999999887653 237888888765421
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc------ceeecCCCcccHhhH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN------KVVNIPNSMTVLDEL 574 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~v~D~ 574 (668)
.+..+.|+.||...+.+++.+.. ..++++..+.|+.+..+.. ....... ........+...+|+
T Consensus 152 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dv 224 (252)
T PRK12747 152 -----LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN--AELLSDPMMKQYATTISAFNRLGEVEDI 224 (252)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchh--hhcccCHHHHHHHHhcCcccCCCCHHHH
Confidence 12236799999999998887642 3589999999998887742 1111000 000011246779999
Q ss_pred HHHHHHHHhcc----CCceeeecCC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
|+++..++... .+..+.+.++
T Consensus 225 a~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 225 ADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHHcCccccCcCCcEEEecCC
Confidence 99999988643 2345655544
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=120.01 Aligned_cols=164 Identities=17% Similarity=0.142 Sum_probs=118.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCc-----cccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL-----KNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++||||+|+||.++++.|+++|. ..|++++|....... ..+ .....++..+.+|+.+.+.+.+++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~-~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGA-RHLVLLSRSGPDAPGAAELLAEL--EALGAEVTVVACDVADRAALAAALAAIPA 77 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhC-CeEEEEeCCCCCCccHHHHHHHH--HhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999842 367767665322110 011 01134577899999999888776632
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccc-cCCCCCCcCCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV-YGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~ 151 (668)
..+|+|||+||..... ...++....+++|+.++.+++++++..+ .+++|++||... ++..
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~------------ 144 (180)
T smart00822 78 RLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNP------------ 144 (180)
T ss_pred HcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCC------------
Confidence 3579999999965421 1223456778999999999999997754 688999998544 3321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCcee
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVY 190 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~ 190 (668)
....|+.+|...+.+++... ..+++++.+.||.+-
T Consensus 145 ---~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~ 179 (180)
T smart00822 145 ---GQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA 179 (180)
T ss_pred ---CchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence 13469999999999996654 458999999988764
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.2e-13 Score=130.85 Aligned_cols=190 Identities=11% Similarity=0.105 Sum_probs=131.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||..+++.|+++|++| ..+..|+++.++++++++.. ++|+
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNG 85 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999753 23567888888887776653 5799
Q ss_pred EEEcccccCCCC----------ccccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCCCCCC
Q 005949 435 VFNAAGVTGRPN----------VDWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAHPEGS 498 (668)
Q Consensus 435 Vih~a~~~~~~~----------~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~p~~~ 498 (668)
|||+||...... .+.........+++|+.++.++++++.. . +..++++||...|+.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-------- 157 (253)
T PRK08217 86 LINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-------- 157 (253)
T ss_pred EEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC--------
Confidence 999999651000 1112233455678999999988766543 2 224666776554421
Q ss_pred CCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcc
Q 005949 499 GIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMT 569 (668)
Q Consensus 499 ~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~ 569 (668)
++...|+.+|...|.+++.+.. ..++++..++|+.+.++.. +........ ....+.
T Consensus 158 -----------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~ 222 (253)
T PRK08217 158 -----------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMI----PVGRLG 222 (253)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcC----CcCCCc
Confidence 1236799999999999888643 3589999999999877642 111111111 112456
Q ss_pred cHhhHHHHHHHHHhcc--CCceeeecCCC
Q 005949 570 VLDELLPISIEMAKRN--LRGIWNFTNPG 596 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~--~~g~~ni~~~~ 596 (668)
..+|+|+++..++... .+.+|++.++-
T Consensus 223 ~~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 223 EPEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred CHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 7899999999998754 45588888753
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=128.58 Aligned_cols=194 Identities=14% Similarity=0.108 Sum_probs=133.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------cccccccCChhHHHHHhhhc-----CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~ 442 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.+ ++|+|||+||..
T Consensus 7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~ 86 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGS 86 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 579999999999999999999999754 34568899998888877764 689999999965
Q ss_pred CCCC-ccccccccccceehhhhhhHHHHHHHHHc-----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 443 GRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 443 ~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
.... .+.........+++|+.++.++++++... + .+++++||...+. +.+..+.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------------~~~~~~~Y 148 (252)
T PRK07856 87 PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------------PSPGTAAY 148 (252)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------------CCCCCchh
Confidence 1101 11223344567889999999999988641 2 3678888865431 11234689
Q ss_pred hhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcc-------cceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 516 SKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY-------NKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
+.+|...|.+++.+.. .. +++..++|+.+..+.. ...... ..... ...+...+|++++++.++...
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p~~va~~~~~L~~~~ 224 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQS--ELHYGDAEGIAAVAATVP-LGRLATPADIAWACLFLASDL 224 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHH--hhhccCHHHHHHHhhcCC-CCCCcCHHHHHHHHHHHcCcc
Confidence 9999999999888643 23 8999999988876631 110000 00000 123456899999999988653
Q ss_pred ----CCceeeecCCCccC
Q 005949 586 ----LRGIWNFTNPGVVS 599 (668)
Q Consensus 586 ----~~g~~ni~~~~~~s 599 (668)
.+..+.+.++...+
T Consensus 225 ~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 225 ASYVSGANLEVHGGGERP 242 (252)
T ss_pred cCCccCCEEEECCCcchH
Confidence 34566776665443
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=132.07 Aligned_cols=197 Identities=16% Similarity=0.063 Sum_probs=133.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC----cCCCCeEEEEccCCC--HHHHHH---Hh
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS----KASSNFKFVKGDIAS--ADLVNF---LL 76 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d--~~~~~~---~~ 76 (668)
++.++||||||.||++++++|+++ +++|++++|... .++.+..+ ....++..+.+|+.+ .+.+.. .+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~ 128 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPD--KLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETI 128 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHH--HHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHh
Confidence 579999999999999999999999 678888888642 22221111 112357778899985 333333 33
Q ss_pred ccCCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 77 ITESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
...++|++||+||.... +...++....+++|+.++..+.+++.. .+ ..++|++||...+....
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~------ 201 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPS------ 201 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC------
Confidence 33357799999997532 122333456889999999998887642 23 57999999976642110
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
......|+.+|.+.+.+.+.++.+. |+++.++.||.|-.+.... .....
T Consensus 202 ------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------------~~~~~---------- 253 (320)
T PLN02780 202 ------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------------RRSSF---------- 253 (320)
T ss_pred ------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------------cCCCC----------
Confidence 0114579999999999999887654 8999999999987663210 00000
Q ss_pred eceeHHHHHHHHHHHHhc
Q 005949 224 SYLYCEDVAEAFECILHK 241 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~ 241 (668)
.....+++|+.++..+..
T Consensus 254 ~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 254 LVPSSDGYARAALRWVGY 271 (320)
T ss_pred CCCCHHHHHHHHHHHhCC
Confidence 124678899998888853
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.3e-13 Score=130.17 Aligned_cols=185 Identities=16% Similarity=0.086 Sum_probs=124.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc------CCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV------KPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~------~~d~Vih~a 439 (668)
++|+||||+|+||.++++.|+++|++| ..+.+|++|.+++.+.++.+ .+|.+||+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999854 33557888887766655542 479999999
Q ss_pred cccCC-CCccccccccccceehhhhhhHHH----HHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 440 GVTGR-PNVDWCESHKTDTIRTNVAGTLTL----ADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 440 ~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~l----l~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
|.... +......++....+++|+.|+.++ ++++++.+. +++++||...+.+ ....+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------------~~~~~ 144 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS------------------TPGRG 144 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC------------------CCCcc
Confidence 96511 011112334557788999998886 566666665 5667776432211 12236
Q ss_pred cchhhHHHHHHHHHhc---cCeeEeEEeeeecCCCCChhhHHHHhhccccee---e---cCCCcccHhhHHHHHHHHHhc
Q 005949 514 FYSKTKAMVEELLKEY---DNVCTLRVRMPISSDLNNPRNFITKISRYNKVV---N---IPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~---~---~~~~~~~v~D~a~~~~~~~~~ 584 (668)
.|+.+|...|.+.+.+ ....++++.+++|+.+..+ +...+....... . ....+++.+|+++++..++++
T Consensus 145 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~ 222 (256)
T PRK08017 145 AYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTR--FTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALES 222 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccc--hhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhC
Confidence 7999999999987653 2346899999999766543 333332221100 0 112468999999999999987
Q ss_pred cCCc
Q 005949 585 NLRG 588 (668)
Q Consensus 585 ~~~g 588 (668)
+...
T Consensus 223 ~~~~ 226 (256)
T PRK08017 223 PKPK 226 (256)
T ss_pred CCCC
Confidence 6443
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=7e-12 Score=128.58 Aligned_cols=190 Identities=17% Similarity=0.123 Sum_probs=124.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++|+|+||||+|+||+++++.|+++ +++|++++|.... +..... ....++..+.+|++|.+.+.+.+ .++|+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~--l~~~~~-~~~~~v~~v~~Dvsd~~~v~~~l--~~IDi 248 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDK--ITLEIN-GEDLPVKTLHWQVGQEAALAELL--EKVDI 248 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHh-hcCCCeEEEEeeCCCHHHHHHHh--CCCCE
Confidence 45789999999999999999999998 6788888875421 111000 11224678899999999998888 67999
Q ss_pred EEEcCccCCc-ccccCChHHHHHHHHHHHHHHHHHHHHc----CC--C-cEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKVT----GQ--I-RRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 84 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~--~-~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
+||+||.... ..+.++....+++|+.++.++++++... +. . ..+|.+|++.. .. ..
T Consensus 249 LInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~~---------------~~ 312 (406)
T PRK07424 249 LIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-NP---------------AF 312 (406)
T ss_pred EEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-cC---------------CC
Confidence 9999996532 2233345678999999999999887531 11 1 23455554221 10 01
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
...|+++|.+.+.+........++.+..+.+ ||... .+ .+ ...+..+|+|+.+
T Consensus 313 ~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t--~~-----------~~----------~~~~spe~vA~~i 365 (406)
T PRK07424 313 SPLYELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKS--NL-----------NP----------IGVMSADWVAKQI 365 (406)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcC--CC-----------Cc----------CCCCCHHHHHHHH
Confidence 2359999999998764333333443444433 34221 10 00 1136789999999
Q ss_pred HHHHhcCC
Q 005949 236 ECILHKGE 243 (668)
Q Consensus 236 ~~~~~~~~ 243 (668)
+.+++++.
T Consensus 366 l~~i~~~~ 373 (406)
T PRK07424 366 LKLAKRDF 373 (406)
T ss_pred HHHHHCCC
Confidence 99998664
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.1e-13 Score=128.87 Aligned_cols=181 Identities=16% Similarity=0.099 Sum_probs=126.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
|++++||||+|+||+.++++|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD 85 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999854 34678999998887777753 589
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... ......+....+++|+.++.++++.+.. .+ .+++++||...+.+
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------- 148 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA----------------- 148 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC-----------------
Confidence 9999999651100 1112234556688999999988877633 33 36777788765522
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
......|+.+|...+.+++.+. ...++++..++|+.+-.+.. -.... .........+..+|+|++++.++..
T Consensus 149 -~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~-~~~~~---~~~~~~~~~~~~~~va~~~~~l~~~ 223 (241)
T PRK07454 149 -FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLW-DTETV---QADFDRSAMLSPEQVAQTILHLAQL 223 (241)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcc-ccccc---ccccccccCCCHHHHHHHHHHHHcC
Confidence 1223679999999999887753 34589999999998766531 00000 0000012346789999999999986
Q ss_pred c
Q 005949 585 N 585 (668)
Q Consensus 585 ~ 585 (668)
+
T Consensus 224 ~ 224 (241)
T PRK07454 224 P 224 (241)
T ss_pred C
Confidence 5
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.1e-13 Score=147.88 Aligned_cols=197 Identities=14% Similarity=0.062 Sum_probs=137.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++|+||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|+|
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvv 502 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIV 502 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 589999999999999999999999864 14456899998888777754 68999
Q ss_pred EEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 436 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
||+||...... ...........+++|+.++.++++++.. .+ .+++++||...+.+
T Consensus 503 I~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~------------------ 564 (681)
T PRK08324 503 VSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP------------------ 564 (681)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC------------------
Confidence 99999762101 1122334556788999999999877753 33 47888888755421
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCC-ChhhHHH-----Hh-hcccce---------eecCCCcc
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLN-NPRNFIT-----KI-SRYNKV---------VNIPNSMT 569 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~-g~~~~~~-----~~-~~~~~~---------~~~~~~~~ 569 (668)
.+..+.|+.+|...|.+++.+.. ..++++..++|+.+| ++..+-. .. ..+... ......++
T Consensus 565 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v 644 (681)
T PRK08324 565 GPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREV 644 (681)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCcc
Confidence 12236799999999999988742 357999999999997 4431111 00 011000 01122678
Q ss_pred cHhhHHHHHHHHHhc--c--CCceeeecCCCcc
Q 005949 570 VLDELLPISIEMAKR--N--LRGIWNFTNPGVV 598 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~--~--~~g~~ni~~~~~~ 598 (668)
+.+|+|++++.++.. . .+.+||+.++...
T Consensus 645 ~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 645 TPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 999999999998842 2 4568999887554
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.9e-13 Score=128.38 Aligned_cols=193 Identities=12% Similarity=0.049 Sum_probs=134.3
Q ss_pred EEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-CCCEEEEccccc
Q 005949 387 LIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVT 442 (668)
Q Consensus 387 li~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~ 442 (668)
+||||+|+||+.+++.|+++|++| +++.+|++|++++.++++.. ++|++||++|..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 599999999999999999999754 35568999999999888875 469999999976
Q ss_pred CCC-CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 443 GRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 443 ~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
... ..+...++....+++|+.++.+++++....+. +++++||...|.. .++.+.|+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~------------------~~~~~~Y~~sK~ 142 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP------------------SASGVLQGAINA 142 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC------------------CCcchHHHHHHH
Confidence 211 11123345667889999999999996665443 6777777765521 233468999999
Q ss_pred HHHHHHHhccC-eeEeEEeeeecCCCCChhhH-H-H----Hhhcc-cceeecCCCcccHhhHHHHHHHHHhcc--CCcee
Q 005949 521 MVEELLKEYDN-VCTLRVRMPISSDLNNPRNF-I-T----KISRY-NKVVNIPNSMTVLDELLPISIEMAKRN--LRGIW 590 (668)
Q Consensus 521 ~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~~~-~-~----~~~~~-~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ 590 (668)
..|.+++.+.. ...+++..+.|+.+..+... . . ..... ..... ..-+...+|+|++++.++... .+.+|
T Consensus 143 a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~~~G~~~ 221 (230)
T PRK07041 143 ALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP-ARRVGQPEDVANAILFLAANGFTTGSTV 221 (230)
T ss_pred HHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhcCCCcCCcEE
Confidence 99999888643 23488888888876554310 0 0 00000 00000 112346799999999999865 36688
Q ss_pred eecCCCcc
Q 005949 591 NFTNPGVV 598 (668)
Q Consensus 591 ni~~~~~~ 598 (668)
++.++.++
T Consensus 222 ~v~gg~~~ 229 (230)
T PRK07041 222 LVDGGHAI 229 (230)
T ss_pred EeCCCeec
Confidence 98887653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.9e-13 Score=129.41 Aligned_cols=192 Identities=16% Similarity=0.134 Sum_probs=129.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhc-----CCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a 439 (668)
++++||||+|+||.++++.|.++|++| .++.+|++|++++.++++.. ++|+|||+|
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~a 87 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNA 87 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 579999999999999999999999865 24567999999888887754 689999999
Q ss_pred cccCC-CCccccccccccceehhhhhhHHHHHH----HHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 440 GVTGR-PNVDWCESHKTDTIRTNVAGTLTLADV----CRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 440 ~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~----~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
|.... |.......+....+++|+.++..+.++ +++.+ .++|++||...++.. .+..+
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------------~~~~~ 150 (255)
T PRK06463 88 GIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-----------------AEGTT 150 (255)
T ss_pred CcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-----------------CCCcc
Confidence 97521 111223344567788999996555444 44333 478888887655211 11235
Q ss_pred cchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH----------HHHhhcccceeecCCCcccHhhHHHHHHH
Q 005949 514 FYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF----------ITKISRYNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~----------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
.|+.||...+.+++.+.. ..++++..++|+.+-.+... ........ . ....+...+|++++++.
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~va~~~~~ 227 (255)
T PRK06463 151 FYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK--T-VLKTTGKPEDIANIVLF 227 (255)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhC--C-CcCCCcCHHHHHHHHHH
Confidence 799999999999888742 35899999999877544210 00000000 0 01234568999999999
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+..+.+.++
T Consensus 228 l~s~~~~~~~G~~~~~dgg 246 (255)
T PRK06463 228 LASDDARYITGQVIVADGG 246 (255)
T ss_pred HcChhhcCCCCCEEEECCC
Confidence 98653 3446666554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.7e-12 Score=123.58 Aligned_cols=204 Identities=16% Similarity=0.157 Sum_probs=135.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++|||||++.||.+++++|. + +++|++.+|... .++.+... .....+.++.+|+.|.+++.+++..
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 75 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPE--AAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA 75 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHH--HHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc
Confidence 579999999999999999998 5 578888887542 22221111 1122477899999999998876632
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... ....+..+.+.+|+.+...++.. ..+.+.-.++|++||...+-+..
T Consensus 76 g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~---------- 145 (246)
T PRK05599 76 GEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR---------- 145 (246)
T ss_pred CCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc----------
Confidence 3689999999975321 11122334566777777655443 33322236899999965432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+.+.++.+ .++++..+.||.|..+... ...+.. -...
T Consensus 146 ----~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~-------------~~~~~~---------~~~~ 199 (246)
T PRK05599 146 ----ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT-------------GMKPAP---------MSVY 199 (246)
T ss_pred ----CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc-------------CCCCCC---------CCCC
Confidence 2346999999999999988765 3789999999988765321 000000 0146
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEc
Q 005949 228 CEDVAEAFECILHKGEVGHVYNVG 251 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~~~~~~ni~ 251 (668)
.+|+|++++.++..+..++.+.+.
T Consensus 200 pe~~a~~~~~~~~~~~~~~~~~~~ 223 (246)
T PRK05599 200 PRDVAAAVVSAITSSKRSTTLWIP 223 (246)
T ss_pred HHHHHHHHHHHHhcCCCCceEEeC
Confidence 799999999999876544455555
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=8.1e-13 Score=131.19 Aligned_cols=182 Identities=16% Similarity=0.100 Sum_probs=123.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
|+|+||||+|+||.++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999865 23568899988888777642 5899
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||....... .....+....+++|+.++.++.+++ ++.+. +++++||...+..
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------------ 142 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ------------------ 142 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC------------------
Confidence 9999997621001 1112233446789988888866664 55554 6777777655421
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc------eeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK------VVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~v~D~a~~~~ 579 (668)
.+..+.|+.+|...+.+...+.. ..++++..++|+.+..+. ...+....+ .......++..+|+|+.++
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~ 220 (270)
T PRK05650 143 GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL--LDSFRGPNPAMKAQVGKLLEKSPITAADIADYIY 220 (270)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc--ccccccCchhHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 12346899999997777666532 358999999998887653 111110000 0011235678999999999
Q ss_pred HHHhcc
Q 005949 580 EMAKRN 585 (668)
Q Consensus 580 ~~~~~~ 585 (668)
.++++.
T Consensus 221 ~~l~~~ 226 (270)
T PRK05650 221 QQVAKG 226 (270)
T ss_pred HHHhCC
Confidence 999864
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=129.20 Aligned_cols=179 Identities=12% Similarity=0.042 Sum_probs=124.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.+++++|+++|++| .++.+|+++++++.++++.+ ++|+
T Consensus 11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 90 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI 90 (263)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 689999999999999999999999864 23568999998888777754 6899
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH-----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD-----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~-----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||..... ..+...++....+++|+.++.++++++.. .+ .+++++||.....
T Consensus 91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------ 152 (263)
T PRK07814 91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------------ 152 (263)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------------
Confidence 99999965110 11223345667889999999999999974 22 3677887753221
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe--eEeEEeeeecCCCCChh-h-------HHHHhhcccceeecCCCcccHhhHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPR-N-------FITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~-~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
+..+.+.|+.+|...|.+++.+... ..+++..+.|+.+..+. . +...+. .. .. .......+|+|++
T Consensus 153 ~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~va~~ 228 (263)
T PRK07814 153 AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPME-KA--TP-LRRLGDPEDIAAA 228 (263)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHH-hc--CC-CCCCcCHHHHHHH
Confidence 1223468999999999998886432 24788888887775432 1 111111 00 00 1124568999999
Q ss_pred HHHHHhc
Q 005949 578 SIEMAKR 584 (668)
Q Consensus 578 ~~~~~~~ 584 (668)
++.++..
T Consensus 229 ~~~l~~~ 235 (263)
T PRK07814 229 AVYLASP 235 (263)
T ss_pred HHHHcCc
Confidence 9999864
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-12 Score=126.23 Aligned_cols=189 Identities=13% Similarity=0.060 Sum_probs=129.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++|+||||+|+||.+++++|+++|++| ..+.+|++|.+++.+.+++. ++|+|
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 86 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVL 86 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999854 23557889988888777753 68999
Q ss_pred EEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc---CC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH---GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 436 ih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
||+++....... +...++....+++|+.++.+++++|... +. ++|++||...+. +..
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~------------------~~~ 148 (237)
T PRK07326 87 IANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN------------------FFA 148 (237)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc------------------CCC
Confidence 999986521111 1123344567889999999999988642 22 566777754331 112
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-- 585 (668)
....|+.+|...+.+.+.+. ...++++..++++.+..+. .... . .......+..+|+++.++.++..+
T Consensus 149 ~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~--~~~~----~-~~~~~~~~~~~d~a~~~~~~l~~~~~ 221 (237)
T PRK07326 149 GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF--NGHT----P-SEKDAWKIQPEDIAQLVLDLLKMPPR 221 (237)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc--cccc----c-chhhhccCCHHHHHHHHHHHHhCCcc
Confidence 23579999999888877752 3468999999998876542 1110 0 000112356899999999999765
Q ss_pred -CCceeeecCCCc
Q 005949 586 -LRGIWNFTNPGV 597 (668)
Q Consensus 586 -~~g~~ni~~~~~ 597 (668)
..+.+.+.++.+
T Consensus 222 ~~~~~~~~~~~~~ 234 (237)
T PRK07326 222 TLPSKIEVRPSRP 234 (237)
T ss_pred ccccceEEecCCC
Confidence 344555554433
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-12 Score=128.46 Aligned_cols=192 Identities=11% Similarity=0.097 Sum_probs=132.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|.||+++++.|+++|++| .++.+|++|++++.++++.+ ++|+|||
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~ 86 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVN 86 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 589999999999999999999999854 34568999998888877764 6899999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
+||....+......++....+++|+.++.++++++.. .+.+++++||...+.+. +...
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------------~~~~ 148 (261)
T PRK08265 87 LACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ------------------TGRW 148 (261)
T ss_pred CCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------------CCCc
Confidence 9996521122223445567788999999999988764 23467888886543211 1235
Q ss_pred cchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc--------eeecCCCcccHhhHHHHHHHHH
Q 005949 514 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK--------VVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.|+.+|...+.+++.+. ...++++..++|+.+..+. ...+..... ....-.-+...+|+|+++..++
T Consensus 149 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~--~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~ 226 (261)
T PRK08265 149 LYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV--MDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLC 226 (261)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh--hhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHc
Confidence 79999999999888763 2358999999998876652 121111100 0001112345789999999998
Q ss_pred hcc----CCceeeecCC
Q 005949 583 KRN----LRGIWNFTNP 595 (668)
Q Consensus 583 ~~~----~~g~~ni~~~ 595 (668)
... .+.++.+.++
T Consensus 227 s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 227 SDAASFVTGADYAVDGG 243 (261)
T ss_pred CccccCccCcEEEECCC
Confidence 743 3446666654
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-12 Score=128.14 Aligned_cols=195 Identities=15% Similarity=0.071 Sum_probs=129.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|+.| .++.+|+++.+++.+++++. ++|+|||
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 86 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVN 86 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 589999999999999999999999754 24567899988888776643 5799999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... ......+....+++|+.++.++++++.. .+ .++|++||...+.+. +.
T Consensus 87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------------~~ 148 (245)
T PRK12936 87 NAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN------------------PG 148 (245)
T ss_pred CCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC------------------CC
Confidence 999752101 1122345567789999999999888753 23 367888886544221 11
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN- 585 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~- 585 (668)
...|+.+|...+.+++.+.. ..++++..++|+.+..+.. +................+...+|+++++..++...
T Consensus 149 ~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~ 228 (245)
T PRK12936 149 QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEA 228 (245)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccc
Confidence 25699999988877766432 3579999999987655421 10000000000001123456899999998888543
Q ss_pred ---CCceeeecCCC
Q 005949 586 ---LRGIWNFTNPG 596 (668)
Q Consensus 586 ---~~g~~ni~~~~ 596 (668)
.+.++++.++.
T Consensus 229 ~~~~G~~~~~~~g~ 242 (245)
T PRK12936 229 AYVTGQTIHVNGGM 242 (245)
T ss_pred cCcCCCEEEECCCc
Confidence 34578887763
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-12 Score=127.47 Aligned_cols=182 Identities=14% Similarity=0.100 Sum_probs=127.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
+++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3579999999999999999999999754 34567999998888777754 5
Q ss_pred CCEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
+|+|||+||....... ..........+++|+.++.++++++. +.+. +++++||...+.+.
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 147 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL-------------- 147 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC--------------
Confidence 8999999997621111 11123345568899999999998874 3343 67777776543211
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
+ .+.+.|+.||...+.++..+.. ..+++++.++|+.+..+.. ... +. ....+..+|.|+.++.++
T Consensus 148 --~-~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~--~~~---~~----~~~~~~~~~~a~~i~~~~ 215 (248)
T PRK08251 148 --P-GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMN--AKA---KS----TPFMVDTETGVKALVKAI 215 (248)
T ss_pred --C-CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhh--hcc---cc----CCccCCHHHHHHHHHHHH
Confidence 1 1236799999999988877542 3479999999998876531 111 00 112456899999999999
Q ss_pred hccCCcee
Q 005949 583 KRNLRGIW 590 (668)
Q Consensus 583 ~~~~~g~~ 590 (668)
++....+|
T Consensus 216 ~~~~~~~~ 223 (248)
T PRK08251 216 EKEPGRAA 223 (248)
T ss_pred hcCCCeEE
Confidence 87554443
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-12 Score=128.45 Aligned_cols=179 Identities=16% Similarity=0.034 Sum_probs=124.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-----CCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~ 438 (668)
++++||||+|.||+.+++.|+++|++| .++.+|++|++++.++++.+ ++|+|||+
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ 85 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNN 85 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 589999999999999999999999854 34567999998887776654 57999999
Q ss_pred ccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 439 AGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 439 a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
||....... ....+.....+++|+.++.++++++. +.+. +++++||...+.+ .+..
T Consensus 86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~ 147 (273)
T PRK07825 86 AGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP------------------VPGM 147 (273)
T ss_pred CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC------------------CCCC
Confidence 997621011 11122345578899999988887764 3444 6788888654411 1234
Q ss_pred CcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccCC
Q 005949 513 SFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLR 587 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~ 587 (668)
+.|+.||...+.+...+. ...++++++++|+.+..+. .. +.. ......++..+|+|++++.++.++..
T Consensus 148 ~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~--~~----~~~-~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 148 ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL--IA----GTG-GAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh--hc----ccc-cccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 679999988877655542 3468999999998765432 11 110 11122467899999999999987543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.7e-13 Score=130.47 Aligned_cols=145 Identities=17% Similarity=0.107 Sum_probs=103.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
+++|+||||+|+||+++++.|+++|++| .++.+|++|++++.+.+.. ++|+|||+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~id~vi~~ 80 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW-DVDVLLNN 80 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC-CCCEEEEC
Confidence 4579999999999999999999999864 2345789999888887764 67999999
Q ss_pred ccccCC-CCccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 439 AGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 439 a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
||.... +....+.......+++|+.++.++.+.+ ++.+. ++|++||...+.+ .+..
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------------~~~~ 142 (257)
T PRK09291 81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT------------------GPFT 142 (257)
T ss_pred CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC------------------CCCc
Confidence 997611 0111122334456778999887776654 34444 6777777543211 1123
Q ss_pred CcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCC
Q 005949 513 SFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLN 546 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~ 546 (668)
..|+.||...|++++.+.. ..++++++++|+.+.
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 143 GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 6799999999998877532 368999999997653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=128.75 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=126.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||+++++.|+++|++| .++.+|+++.+++.+.++.. ++|+
T Consensus 10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (258)
T PRK06949 10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI 89 (258)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999999999854 24567888888888777754 5799
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc-------------CCcEEEEecceeEeecCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH-------------GILMMNYATGCIFEYDAAHPEGSGI 500 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-------------~~~~v~~sS~~vy~~~~~~p~~~~~ 500 (668)
|||+||..... ..+....+....+++|+.++.++++++... +.+++++||...+..
T Consensus 90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------- 159 (258)
T PRK06949 90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV---------- 159 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----------
Confidence 99999965210 111223456677899999999999987632 136777777654411
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH---HHHhhc-ccceeecCCCcccHhh
Q 005949 501 GYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---ITKISR-YNKVVNIPNSMTVLDE 573 (668)
Q Consensus 501 ~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---~~~~~~-~~~~~~~~~~~~~v~D 573 (668)
.+..+.|+.+|...|.+++.+.. ..++++.+++|+.++++... ...... ...... ...+.-.+|
T Consensus 160 --------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~ 230 (258)
T PRK06949 160 --------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLP-RKRVGKPED 230 (258)
T ss_pred --------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCC-CCCCcCHHH
Confidence 12236799999999998888643 25899999999999887521 111000 000001 123445789
Q ss_pred HHHHHHHHHhc
Q 005949 574 LLPISIEMAKR 584 (668)
Q Consensus 574 ~a~~~~~~~~~ 584 (668)
+++++.+++..
T Consensus 231 ~~~~~~~l~~~ 241 (258)
T PRK06949 231 LDGLLLLLAAD 241 (258)
T ss_pred HHHHHHHHhCh
Confidence 99999998864
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-12 Score=125.09 Aligned_cols=181 Identities=10% Similarity=0.080 Sum_probs=126.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------ccccccCChhHHHHHhhhc-CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------YGKGRLEDCSSLIADVQSV-KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~ 442 (668)
++|+||||+|+||++++++|+++|++|. .+..|++|.+++.+.++.. ++|+|||+||..
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~ 86 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGIA 86 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCC
Confidence 5899999999999999999999998652 2346888888888777764 479999999975
Q ss_pred CC-CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 443 GR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 443 ~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
.. +..+....+....+++|+.++.+++..+... +.+++++||.... ..+.++...|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------------~~~~~~~~~Y~~s 149 (237)
T PRK12742 87 VFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD-----------------RMPVAGMAAYAAS 149 (237)
T ss_pred CCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc-----------------cCCCCCCcchHHh
Confidence 21 0112223455678899999999998776654 3478888885421 0122345689999
Q ss_pred HHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-----HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 519 KAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-----FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 519 K~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|...|.+++.+.. ..++++..++|+.+..+.. ....+. . ... -..+...+|+++++..++...
T Consensus 150 Kaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~-~--~~~-~~~~~~p~~~a~~~~~l~s~~ 220 (237)
T PRK12742 150 KSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMH-S--FMA-IKRHGRPEEVAGMVAWLAGPE 220 (237)
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHH-h--cCC-CCCCCCHHHHHHHHHHHcCcc
Confidence 9999999887633 3579999999988865531 111111 0 000 123456889999999988653
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.43 E-value=5e-12 Score=124.36 Aligned_cols=207 Identities=15% Similarity=0.072 Sum_probs=134.4
Q ss_pred eEEEEcCCChhHHHHHHHHHHh--CCCCEEEEEcCCCccCCccccCCC----cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 8 NILITGAAGFIASHVCNRLIRN--YPEYKIVVLDKLDYCSNLKNLIPS----KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~--g~~~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
.+|||||+|.||.+++++|+++ ..+++|++++|... .++.+... ....++.++.+|+.|.+.+.+++..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~--~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDE--ALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHH--HHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 5899999999999999999972 12688888888532 11111111 1123578899999999988776532
Q ss_pred -C-----CCCEEEEcCccCCcc---c----ccCChHHHHHHHHHHHHHHHHHHHHc-----CCCcEEEEEcCccccCCCC
Q 005949 79 -E-----SIDTIMHFAAQTHVD---N----SFGNSFEFTKNNIYGTHVLLEACKVT-----GQIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 79 -~-----~~d~Vih~a~~~~~~---~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~v~~SS~~vyg~~~ 140 (668)
. +.|+|||+||..... . ..++....+++|+.++..+.+.+... +...++|++||...+.+..
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~ 159 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK 159 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC
Confidence 1 236999999964311 1 12334578899999988877655432 1135899999976543221
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----HHHHHHHHcCCC
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI-----PKFILLAMRGLP 212 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----~~~~~~~~~~~~ 212 (668)
....|+.+|.+.+.+.+.++.+ .++.+..+.||.|-.+... ... +..........
T Consensus 160 --------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~- 222 (256)
T TIGR01500 160 --------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ--QVREESVDPDMRKGLQELK- 222 (256)
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH--HHHHhcCChhHHHHHHHHH-
Confidence 2346999999999999988765 3789999999988665220 000 00000010000
Q ss_pred ceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 213 LPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 213 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
+ ...+...+|+|.+++.++++
T Consensus 223 -~-------~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 223 -A-------KGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred -h-------cCCCCCHHHHHHHHHHHHhc
Confidence 0 11256789999999998864
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-12 Score=128.13 Aligned_cols=195 Identities=16% Similarity=0.139 Sum_probs=129.9
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
|++++|+||+|+||.++++.|+++|+++. ++.+|++|++++.++++.. ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999998642 3457888888887777644 67
Q ss_pred CEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||++|...... .+...+.....+++|+.++.++++++... +. +++++||...+.+.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~--------------- 149 (247)
T PRK05565 85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA--------------- 149 (247)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC---------------
Confidence 99999999761000 01223344667889999999998887642 33 57777876544221
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
.....|+.+|...+.++..+.. ..++++..++|+.+..+.. +................+...+|++++++.+
T Consensus 150 ---~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 226 (247)
T PRK05565 150 ---SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFL 226 (247)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1224699999988887777532 3589999999988765421 1100000000001112456789999999999
Q ss_pred Hhcc----CCceeeecCC
Q 005949 582 AKRN----LRGIWNFTNP 595 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~ 595 (668)
+... .+..+++.++
T Consensus 227 ~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 227 ASDDASYITGQIITVDGG 244 (247)
T ss_pred cCCccCCccCcEEEecCC
Confidence 8653 3446666664
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.2e-13 Score=129.27 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=135.3
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|+|+||||.+|+.+++.|++.+++| +++.+|..|.+++.++|+++ |+||.+.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~--d~v~~~~~~~--- 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGV--DAVFSVTPPS--- 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTC--SEEEEESSCS---
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCC--ceEEeecCcc---
Confidence 7999999999999999999999864 45678888999999999988 9999888744
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
. ..-.....+++++|++.|++++++||.. ... ++.....|....-..|...|+.
T Consensus 76 ~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~---~~~-----------~~~~~~~p~~~~~~~k~~ie~~ 129 (233)
T PF05368_consen 76 H------------PSELEQQKNLIDAAKAAGVKHFVPSSFG---ADY-----------DESSGSEPEIPHFDQKAEIEEY 129 (233)
T ss_dssp C------------CCHHHHHHHHHHHHHHHT-SEEEESEES---SGT-----------TTTTTSTTHHHHHHHHHHHHHH
T ss_pred h------------hhhhhhhhhHHHhhhccccceEEEEEec---ccc-----------cccccccccchhhhhhhhhhhh
Confidence 1 2235667889999999999888887742 111 1111112223455689999998
Q ss_pred HHhccCeeEeEEeeeecCCCCChhhHHHHh-----hcccc--ee-ecCC----Cc-ccHhhHHHHHHHHHhcc--C--Cc
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPRNFITKI-----SRYNK--VV-NIPN----SM-TVLDELLPISIEMAKRN--L--RG 588 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~-----~~~~~--~~-~~~~----~~-~~v~D~a~~~~~~~~~~--~--~g 588 (668)
+++. +++++++|++..+. +++... ..... .. ..+. .+ +..+|+++++..++..+ . +.
T Consensus 130 l~~~----~i~~t~i~~g~f~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~ 203 (233)
T PF05368_consen 130 LRES----GIPYTIIRPGFFME--NLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGK 203 (233)
T ss_dssp HHHC----TSEBEEEEE-EEHH--HHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEE
T ss_pred hhhc----cccceeccccchhh--hhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCE
Confidence 8774 78999999875442 222211 11111 11 1111 34 47899999999999865 2 34
Q ss_pred eeeecCCCccCHHHHHHHHHhhcCCCCCC
Q 005949 589 IWNFTNPGVVSHNEILEMYKKYINPEFKW 617 (668)
Q Consensus 589 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~ 617 (668)
.+++++ +.+|..|+++.+.+.+|+++.+
T Consensus 204 ~~~~~~-~~~t~~eia~~~s~~~G~~v~y 231 (233)
T PF05368_consen 204 TIFLAG-ETLTYNEIAAILSKVLGKKVKY 231 (233)
T ss_dssp EEEEGG-GEEEHHHHHHHHHHHHTSEEEE
T ss_pred EEEeCC-CCCCHHHHHHHHHHHHCCccEE
Confidence 677665 8899999999999999998653
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8e-13 Score=134.11 Aligned_cols=193 Identities=12% Similarity=0.020 Sum_probs=125.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-----CCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~ 438 (668)
++|+||||+|+||.+++++|+++|++| .++.+|++|.+++.++++.. ++|+|||+
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~n 106 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINN 106 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEEC
Confidence 579999999999999999999999854 35678999999888777642 58999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHH----HHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADV----CRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~----~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
||....+ ........+..+++|+.++..+++. +++.+ .++|++||........... . .....+..+..
T Consensus 107 Ag~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~-----~-~~~~~~~~~~~ 179 (315)
T PRK06196 107 AGVMACP-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD-----D-PHFTRGYDKWL 179 (315)
T ss_pred CCCCCCC-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc-----c-cCccCCCChHH
Confidence 9976211 1222334456688999997666664 44444 4788888764322111000 0 00112334456
Q ss_pred cchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--HHH--H----hhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 514 FYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FIT--K----ISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~--~----~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.|+.||.+.+.+.+.+. ...++++..++|+.+.++.. +.. . ..... .......+...+|.|.+++.++
T Consensus 180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~l~ 258 (315)
T PRK06196 180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEH-GNPIDPGFKTPAQGAATQVWAA 258 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhh-hhhhhhhcCCHhHHHHHHHHHh
Confidence 79999999999887763 23589999999999988741 100 0 00000 0000012345789999999888
Q ss_pred hc
Q 005949 583 KR 584 (668)
Q Consensus 583 ~~ 584 (668)
..
T Consensus 259 ~~ 260 (315)
T PRK06196 259 TS 260 (315)
T ss_pred cC
Confidence 64
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.8e-13 Score=128.78 Aligned_cols=148 Identities=17% Similarity=0.177 Sum_probs=109.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhh---------cCCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQS---------VKPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~---------~~~d~ 434 (668)
||+++||||+|+||++++++|+++|++| ..+.+|++|.+++++.+.+ .++|+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 6799999999999999999999999864 2346789998888875543 25799
Q ss_pred EEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+||+||.... +......+.....+++|+.++..+++.+.+. + .+++++||...+.
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------ 142 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN------------------ 142 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC------------------
Confidence 9999997521 1111223455778999999987777666542 3 3678888865442
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC--eeEeEEeeeecCCCCCh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN--VCTLRVRMPISSDLNNP 548 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~--~~~l~~~~~r~~~~~g~ 548 (668)
+..+...|+.+|...|.+++.+.. ..++++..++|+.+-.+
T Consensus 143 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 143 AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 123346899999999999988753 46899999999877554
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.7e-12 Score=125.63 Aligned_cols=190 Identities=17% Similarity=0.149 Sum_probs=129.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+.++||||+|+||++++++|+++|+++. .+.+|++|.+++.+++++. ++|
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 83 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEID 83 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999998642 2347899988888777653 579
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+....+....+++|+.++.++++++. +.+. +++++||.....
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------------ 145 (246)
T PRK12938 84 VLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK------------------ 145 (246)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC------------------
Confidence 99999997621 11122344566778999999777666654 4454 677887754321
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+....+.|+.+|...+.+++.+. ...++++..++|+.+..|.. ++..+.... ....+...+|+++++
T Consensus 146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~ 221 (246)
T PRK12938 146 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI----PVRRLGSPDEIGSIV 221 (246)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcC----CccCCcCHHHHHHHH
Confidence 11233679999998888776653 23689999999998887741 111111111 112345689999999
Q ss_pred HHHHhcc----CCceeeecCC
Q 005949 579 IEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~ 595 (668)
+.++... .+..+.+.++
T Consensus 222 ~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 222 AWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHHcCcccCCccCcEEEECCc
Confidence 9888643 3446666543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=125.29 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=126.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 89 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDV 89 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 479999999999999999999999854 24567899998888777653 5799
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||.... |..+....+....+++|+.++.++++++... + .+++++||..... +
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------------~ 151 (254)
T PRK08085 90 LINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL------------------G 151 (254)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc------------------C
Confidence 9999996510 1112223455667899999999999887653 3 3677777754321 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
.+..+.|+.+|...|.+++.+.. ..++++..++|+.+..+.. +...+... .. -.-+...+|++++
T Consensus 152 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~---~p-~~~~~~~~~va~~ 227 (254)
T PRK08085 152 RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKR---TP-AARWGDPQELIGA 227 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhc---CC-CCCCcCHHHHHHH
Confidence 12336799999999999988743 3589999999998887631 11111110 01 1245568999999
Q ss_pred HHHHHhc
Q 005949 578 SIEMAKR 584 (668)
Q Consensus 578 ~~~~~~~ 584 (668)
+..++..
T Consensus 228 ~~~l~~~ 234 (254)
T PRK08085 228 AVFLSSK 234 (254)
T ss_pred HHHHhCc
Confidence 9988864
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.4e-12 Score=124.25 Aligned_cols=181 Identities=16% Similarity=0.178 Sum_probs=127.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++++||||+|.||++++++|+++|++| ..+..|++|++++.++++.. ++|++|
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv 88 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILI 88 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 479999999999999999999999854 24568999999988887753 689999
Q ss_pred EcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 437 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|+||...... .....++....+++|+.++..+.+++.. . +.+++++||...+.+.
T Consensus 89 ~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------------ 150 (251)
T PRK12481 89 NNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG------------------ 150 (251)
T ss_pred ECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC------------------
Confidence 9999762111 1223455667889999999998888753 2 2478888887655221
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc----c-eeecC-CCcccHhhHHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN----K-VVNIP-NSMTVLDELLPISIE 580 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~----~-~~~~~-~~~~~v~D~a~~~~~ 580 (668)
.....|+.||...+.+++.+.. .+++++..+.|+.+-.+.. ..+.... . ....+ ..+...+|+|+++..
T Consensus 151 ~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~ 228 (251)
T PRK12481 151 IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNT--AALRADTARNEAILERIPASRWGTPDDLAGPAIF 228 (251)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCch--hhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 1124799999999998887643 4689999999988765421 1110000 0 00011 235568999999999
Q ss_pred HHhc
Q 005949 581 MAKR 584 (668)
Q Consensus 581 ~~~~ 584 (668)
++..
T Consensus 229 L~s~ 232 (251)
T PRK12481 229 LSSS 232 (251)
T ss_pred HhCc
Confidence 9864
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.7e-12 Score=124.31 Aligned_cols=190 Identities=13% Similarity=0.096 Sum_probs=128.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 579999999999999999999999854 24567899998888777654 6899
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||.... +..+...++....+++|+.++.++++++.. .+ .+++++||...+ .
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~--~---------------- 143 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAW--D---------------- 143 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhc--c----------------
Confidence 9999985411 111223344567899999999999999953 22 356667665322 1
Q ss_pred CCCCCCcchhhHHHHHHHHHhc----cCeeEeEEeeeecCCCCChhh---------HHHHhhcccceeecCCCcccHhhH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEY----DNVCTLRVRMPISSDLNNPRN---------FITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~----~~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+......|+.+|...+.+.+.+ .+.+++++..++|+.+..+.. +...+.+. .. ...+...+|+
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~v 219 (252)
T PRK07677 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQS---VP-LGRLGTPEEI 219 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhcc---CC-CCCCCCHHHH
Confidence 0112257999999999888764 334689999999988874321 11111111 11 1235568899
Q ss_pred HHHHHHHHhcc----CCceeeecCC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
++++..++... .+.++.+.++
T Consensus 220 a~~~~~l~~~~~~~~~g~~~~~~gg 244 (252)
T PRK07677 220 AGLAYFLLSDEAAYINGTCITMDGG 244 (252)
T ss_pred HHHHHHHcCccccccCCCEEEECCC
Confidence 99998887642 3345555544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=125.16 Aligned_cols=191 Identities=16% Similarity=0.124 Sum_probs=127.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|.++|++| ..+..|+++.+++.++++.. ++|+
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 88 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDI 88 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999854 24567888888887776654 5799
Q ss_pred EEEcccccC--CCCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||... .+..+...++....+++|+.++..+++++. +.+. +++++||...+.
T Consensus 89 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------------ 150 (252)
T PRK07035 89 LVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS------------------ 150 (252)
T ss_pred EEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC------------------
Confidence 999998541 011122333445678899999998887773 3333 667777653321
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccce------eecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKV------VNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~v~D~a~~~ 578 (668)
+.++.+.|+.||.+.|.+++.+.. ..++++..+.|+.+..+. .......... ......+...+|+|+++
T Consensus 151 ~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 228 (252)
T PRK07035 151 PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF--ASALFKNDAILKQALAHIPLRRHAEPSEMAGAV 228 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc--cccccCCHHHHHHHHccCCCCCcCCHHHHHHHH
Confidence 123346799999999999988743 357999999998775432 1111100000 00012345688999999
Q ss_pred HHHHhcc----CCceeeecC
Q 005949 579 IEMAKRN----LRGIWNFTN 594 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~ 594 (668)
+.++... .+.++++.+
T Consensus 229 ~~l~~~~~~~~~g~~~~~dg 248 (252)
T PRK07035 229 LYLASDASSYTTGECLNVDG 248 (252)
T ss_pred HHHhCccccCccCCEEEeCC
Confidence 9988653 344555544
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.1e-12 Score=125.90 Aligned_cols=192 Identities=14% Similarity=0.120 Sum_probs=127.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhc-----CCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a 439 (668)
++|+||||+|+||.+++++|+++|++| .++.+|+++++++.++++.. ++|+|||+|
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a 87 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNA 87 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 589999999999999999999999864 24567899988888887754 689999999
Q ss_pred cccCCCC---ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecce-eEeecCCCCCCCCCCCCCCCCCCC
Q 005949 440 GVTGRPN---VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGC-IFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 440 ~~~~~~~---~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~-vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|...... .+.........+++|+.++.++++.+.. .+ .+++++||.. +++. ..
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~------------------~~ 149 (255)
T PRK06057 88 GISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS------------------AT 149 (255)
T ss_pred CcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC------------------CC
Confidence 9651100 0112233556788999999888887642 33 3677777754 3321 01
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhc-c-----cceeec-CCCcccHhhHHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISR-Y-----NKVVNI-PNSMTVLDELLPISIE 580 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~-~-----~~~~~~-~~~~~~v~D~a~~~~~ 580 (668)
....|+.+|...+.++..+. ...++++..++|+.+.++.. ..... . ...... ...+...+|+++++..
T Consensus 150 ~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 227 (255)
T PRK06057 150 SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLL--QELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAF 227 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchh--hhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 23579999987766665432 12489999999999987741 11100 0 000011 1257788999999988
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+..+.+.++
T Consensus 228 l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 228 LASDDASFITASTFLVDGG 246 (255)
T ss_pred HhCccccCccCcEEEECCC
Confidence 87542 2445555543
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.8e-12 Score=125.31 Aligned_cols=190 Identities=13% Similarity=0.061 Sum_probs=128.9
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCcc-----------------------------------cccccccCChhHHHHH
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPF-----------------------------------EYGKGRLEDCSSLIAD 426 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v-----------------------------------~~~~~D~~d~~~~~~~ 426 (668)
++|+||||+| .||.+++++|+++|++| .++..|+++.+++.++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 85 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV 85 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4799999996 69999999999998643 3345688888887776
Q ss_pred hhhc-----CCCEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCC
Q 005949 427 VQSV-----KPTHVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHP 495 (668)
Q Consensus 427 l~~~-----~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p 495 (668)
++.. ++|+|||+||.... +.......+....+++|+.++.++++++... + .+++++||...+..
T Consensus 86 ~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~----- 160 (256)
T PRK12748 86 FYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP----- 160 (256)
T ss_pred HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC-----
Confidence 6653 58999999997510 1111223445667889999999999998643 2 36778887655421
Q ss_pred CCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh---hHHHHhhcccceeecCCCcc
Q 005949 496 EGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR---NFITKISRYNKVVNIPNSMT 569 (668)
Q Consensus 496 ~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~---~~~~~~~~~~~~~~~~~~~~ 569 (668)
.+....|+.+|.+.|.+++.+.. ..++++..++|+.+..+. .....+... .....+.
T Consensus 161 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~----~~~~~~~ 223 (256)
T PRK12748 161 -------------MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLVPK----FPQGRVG 223 (256)
T ss_pred -------------CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhcc----CCCCCCc
Confidence 12235799999999999887643 357999999998776542 111111111 1112234
Q ss_pred cHhhHHHHHHHHHhcc----CCceeeecCC
Q 005949 570 VLDELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
..+|+++++..++... .+.++++.++
T Consensus 224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 224 EPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 4789999999888642 3457777655
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.8e-12 Score=125.55 Aligned_cols=178 Identities=12% Similarity=0.087 Sum_probs=120.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc--------CCccccCCC--cCCCCeEEEEccCCCHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC--------SNLKNLIPS--KASSNFKFVKGDIASAD 70 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~--------~~~~~~~~~--~~~~~~~~~~~Dl~d~~ 70 (668)
|..+++|++|||||++.||.++++.|++. +++|++.+|.... ..+..+... ....++..+.+|+.|.+
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~ 80 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPE 80 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44566799999999999999999999998 6788888875321 111111100 11234678999999999
Q ss_pred HHHHHhcc-----CCCCEEEEcC-ccCC-----c---ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCc
Q 005949 71 LVNFLLIT-----ESIDTIMHFA-AQTH-----V---DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTD 133 (668)
Q Consensus 71 ~~~~~~~~-----~~~d~Vih~a-~~~~-----~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~ 133 (668)
.+.+++.. .++|++||+| |... . +...++....++.|+.++..+.+++... ..-.++|++||.
T Consensus 81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~ 160 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDG 160 (305)
T ss_pred HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCc
Confidence 98877643 3689999999 6421 1 1112234467788998888877655431 113689999985
Q ss_pred cc-cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCC
Q 005949 134 EV-YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGP 192 (668)
Q Consensus 134 ~v-yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~ 192 (668)
.. ++... ......|+.+|.....+.+.++.+. ++++..+.||.|-.+
T Consensus 161 ~~~~~~~~------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 161 TAEYNATH------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred cccccCcC------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 43 22111 1113469999999999998877654 799999999987654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.3e-12 Score=129.30 Aligned_cols=190 Identities=12% Similarity=0.053 Sum_probs=127.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||.++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~ 88 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDT 88 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 479999999999999999999999854 24568999999888877653 6899
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHH----HHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVC----RDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+||+||.... +..+...++....+++|+.++.++.+++ ++.+ .++|++||...|..
T Consensus 89 lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~------------------ 150 (334)
T PRK07109 89 WVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS------------------ 150 (334)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC------------------
Confidence 9999996511 0111223344556778877776655544 4443 36888888776622
Q ss_pred CCCCCcchhhHHHHHHHHHhcc-----CeeEeEEeeeecCCCCChhh-HHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRN-FITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.+..+.|+.+|...+.+...+. ...+++++.++|+.+..|.. ........ .......+...+|+|++++.++
T Consensus 151 ~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~--~~~~~~~~~~pe~vA~~i~~~~ 228 (334)
T PRK07109 151 IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPV--EPQPVPPIYQPEVVADAILYAA 228 (334)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccc--cccCCCCCCCHHHHHHHHHHHH
Confidence 1223679999999888776652 12479999999998877631 11111111 0011123456899999999999
Q ss_pred hccCCceeeecC
Q 005949 583 KRNLRGIWNFTN 594 (668)
Q Consensus 583 ~~~~~g~~ni~~ 594 (668)
.++ ...+.++.
T Consensus 229 ~~~-~~~~~vg~ 239 (334)
T PRK07109 229 EHP-RRELWVGG 239 (334)
T ss_pred hCC-CcEEEeCc
Confidence 865 33455554
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.9e-12 Score=115.94 Aligned_cols=182 Identities=16% Similarity=0.114 Sum_probs=129.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
+-++|||||+.||.++++.|.+.|++| .....|++|.++++++++.. +.|++|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLv 86 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILV 86 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEE
Confidence 469999999999999999999999954 34568999998876666643 589999
Q ss_pred EcccccC-CCCccccccccccceehhhhhhHHHHHHHH-----HcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTG-RPNVDWCESHKTDTIRTNVAGTLTLADVCR-----DHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~-~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~-----~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|.||... .|-.....++...++++|+.|+.+..++.. +.+.++|.+||...- .+.+
T Consensus 87 NNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~------------------~~y~ 148 (246)
T COG4221 87 NNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR------------------YPYP 148 (246)
T ss_pred ecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc------------------ccCC
Confidence 9999872 111122345667889999999999998863 233488999886522 1223
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc---c--eeecCCCcccHhhHHHHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN---K--VVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~---~--~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
..+.|+.+|+..-++...... ..++|++.+-|+-+-... +..+...+ . ....+..++.-+|+|+++.+++
T Consensus 149 ~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~--~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~ 226 (246)
T COG4221 149 GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTE--FSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAA 226 (246)
T ss_pred CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceeccee--cccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHH
Confidence 347899999999988777632 257999999887764321 11111110 0 1112446788999999999999
Q ss_pred hcc
Q 005949 583 KRN 585 (668)
Q Consensus 583 ~~~ 585 (668)
+++
T Consensus 227 ~~P 229 (246)
T COG4221 227 TQP 229 (246)
T ss_pred hCC
Confidence 975
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.39 E-value=4e-12 Score=125.15 Aligned_cols=193 Identities=18% Similarity=0.113 Sum_probs=128.6
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
+++||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|+|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 59999999999999999999999754 24567999999888777654 57999
Q ss_pred EEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 436 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
||+||.... +..+.........+++|+.++..+++++.. .+ .+++++||.....+
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------ 143 (254)
T TIGR02415 82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG------------------ 143 (254)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC------------------
Confidence 999997510 001222344456789999999988877754 22 36777777543311
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccc---------e--eecCCCcccHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNK---------V--VNIPNSMTVLD 572 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~---------~--~~~~~~~~~v~ 572 (668)
.+..+.|+.+|...|.+++.+.. ..++++..++|+.+..+.. +.....+... . ......+...+
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
T TIGR02415 144 NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPE 223 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHH
Confidence 11246899999999999876532 2479999999987766531 1110000000 0 00012356789
Q ss_pred hHHHHHHHHHhcc---CCceeeecCC
Q 005949 573 ELLPISIEMAKRN---LRGIWNFTNP 595 (668)
Q Consensus 573 D~a~~~~~~~~~~---~~g~~ni~~~ 595 (668)
|+++++..++... ..|.+...++
T Consensus 224 ~~a~~~~~l~~~~~~~~~g~~~~~d~ 249 (254)
T TIGR02415 224 DVAGLVSFLASEDSDYITGQSILVDG 249 (254)
T ss_pred HHHHHHHhhcccccCCccCcEEEecC
Confidence 9999999999764 2355544443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.6e-12 Score=123.80 Aligned_cols=191 Identities=10% Similarity=0.029 Sum_probs=126.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhc-----CCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~ 438 (668)
+++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|||+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 3589999999999999999999999865 23567899988887776664 48999999
Q ss_pred ccccCCC-CccccccccccceehhhhhhHHHHHHHHHc----C---CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 439 AGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G---ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 439 a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~---~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
||..... ......++....+++|+.++..+.+.+... + ..++++||..... +.+
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~------------------~~~ 143 (236)
T PRK06483 82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK------------------GSD 143 (236)
T ss_pred CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc------------------CCC
Confidence 9965110 111123445667889999998887777542 2 3567776643221 112
Q ss_pred CCCcchhhHHHHHHHHHhccCee--EeEEeeeecCCCCC-hh---hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 511 TGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNN-PR---NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g-~~---~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
....|+.||...|.+++.+...+ .+++..+.|+.+.- .. .......... ..+ -+...+|+++++..++..
T Consensus 144 ~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~va~~~~~l~~~ 219 (236)
T PRK06483 144 KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKALAKS---LLK-IEPGEEEIIDLVDYLLTS 219 (236)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHhccC---ccc-cCCCHHHHHHHHHHHhcC
Confidence 23579999999999998874322 48999999987632 11 1111111111 111 133578999999998864
Q ss_pred c--CCceeeecCC
Q 005949 585 N--LRGIWNFTNP 595 (668)
Q Consensus 585 ~--~~g~~ni~~~ 595 (668)
. .+.++.+.++
T Consensus 220 ~~~~G~~i~vdgg 232 (236)
T PRK06483 220 CYVTGRSLPVDGG 232 (236)
T ss_pred CCcCCcEEEeCcc
Confidence 3 3445665554
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.7e-12 Score=125.09 Aligned_cols=181 Identities=13% Similarity=0.067 Sum_probs=123.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------------ccccccCChhHHHHHhhhc--
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------------YGKGRLEDCSSLIADVQSV-- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------------~~~~D~~d~~~~~~~l~~~-- 430 (668)
++++||||+|+||.++++.|+++|++|. .+.+|+++++++.++++..
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 86 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE 86 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999998651 2347889998888877754
Q ss_pred ---CCCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCC
Q 005949 431 ---KPTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 431 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
++|+|||+||...... .....++....+++|+.++.++++++... +.+++++||.... .
T Consensus 87 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----~------- 154 (273)
T PRK08278 87 RFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL-----D------- 154 (273)
T ss_pred HhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc-----c-------
Confidence 7899999999762111 11223344667889999999999999643 2356666653211 0
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCC-CCChhhHHHHhhcccceeecCCCcccHhhHHHH
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSD-LNNPRNFITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
....++.+.|+.||.+.|.+++.+.. ..++++..+.|+. +..+ +......... ........+|++++
T Consensus 155 ----~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~--~~~~~~~~~~---~~~~~~~p~~va~~ 225 (273)
T PRK08278 155 ----PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA--AVRNLLGGDE---AMRRSRTPEIMADA 225 (273)
T ss_pred ----ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH--HHHhcccccc---cccccCCHHHHHHH
Confidence 01113447899999999999988743 3579999999874 3322 2222211111 11234567899999
Q ss_pred HHHHHhcc
Q 005949 578 SIEMAKRN 585 (668)
Q Consensus 578 ~~~~~~~~ 585 (668)
++.++...
T Consensus 226 ~~~l~~~~ 233 (273)
T PRK08278 226 AYEILSRP 233 (273)
T ss_pred HHHHhcCc
Confidence 99998753
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.3e-12 Score=127.90 Aligned_cols=189 Identities=14% Similarity=0.084 Sum_probs=126.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|.||+++++.|+++|++| .++..|++|+++++++++.. ++|+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 87 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDV 87 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 479999999999999999999999864 24567999999888777542 6799
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+||+||....... +...++....+++|+.++.++.+++. +.+ ..+|++||...+..
T Consensus 88 lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~------------------ 149 (330)
T PRK06139 88 WVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA------------------ 149 (330)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC------------------
Confidence 9999997621111 11223345678899999999888763 333 36777777654421
Q ss_pred CCCCCcchhhHHHHHHHHHh----ccCeeEeEEeeeecCCCCChhhH-HHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 509 NFTGSFYSKTKAMVEELLKE----YDNVCTLRVRMPISSDLNNPRNF-ITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~----~~~~~~l~~~~~r~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
.+....|+.||...+.+... +.+..++++..+.|+.+..|... ..... .. .......+...+|+|++++.++.
T Consensus 150 ~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~-~~-~~~~~~~~~~pe~vA~~il~~~~ 227 (330)
T PRK06139 150 QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT-GR-RLTPPPPVYDPRRVAKAVVRLAD 227 (330)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc-cc-cccCCCCCCCHHHHHHHHHHHHh
Confidence 12236799999975555444 43334899999999988877421 00111 00 01111235578999999999998
Q ss_pred ccCCceeeec
Q 005949 584 RNLRGIWNFT 593 (668)
Q Consensus 584 ~~~~g~~ni~ 593 (668)
++.. .+.++
T Consensus 228 ~~~~-~~~~g 236 (330)
T PRK06139 228 RPRA-TTTVG 236 (330)
T ss_pred CCCC-EEEcC
Confidence 6543 33443
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-12 Score=120.04 Aligned_cols=184 Identities=16% Similarity=0.149 Sum_probs=131.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCc-------------------------ccccccccCChhHHHHHhhh-----cCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIP-------------------------FEYGKGRLEDCSSLIADVQS-----VKP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~-------------------------v~~~~~D~~d~~~~~~~l~~-----~~~ 432 (668)
++.++|||||+-||..+++.|.++|++ |.++..|+++++++.++... .++
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~I 85 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPI 85 (265)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcc
Confidence 357999999999999999999999984 35788999999887776553 268
Q ss_pred CEEEEcccccC-CCCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTG-RPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~-~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|++||+||+.. .+..+.++++..++++.|+.++..|-.+... .+ .+++.++|...|
T Consensus 86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~------------------ 147 (265)
T COG0300 86 DVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL------------------ 147 (265)
T ss_pred cEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc------------------
Confidence 99999999882 1223344566678899999998888777643 33 489999998766
Q ss_pred CCCCCCCcchhhHHHHHHHHHhc---cCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEY---DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
.|.+-.+.|+.||...=..-... -+..|++++.+-|+.+.-. |...--...........++..+|+|+..+..+.
T Consensus 148 ~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~--f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~ 225 (265)
T COG0300 148 IPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE--FFDAKGSDVYLLSPGELVLSPEDVAEAALKALE 225 (265)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc--cccccccccccccchhhccCHHHHHHHHHHHHh
Confidence 23334578999998765544433 2457899999999766543 333100011111123356678999999999998
Q ss_pred ccC
Q 005949 584 RNL 586 (668)
Q Consensus 584 ~~~ 586 (668)
+..
T Consensus 226 ~~k 228 (265)
T COG0300 226 KGK 228 (265)
T ss_pred cCC
Confidence 753
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.7e-12 Score=123.45 Aligned_cols=192 Identities=18% Similarity=0.094 Sum_probs=128.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|.||.++++.|.++|++| .++.+|+++++++.++++.. ++|+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDI 86 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 479999999999999999999999854 24567999998888777653 6899
Q ss_pred EEEcccccCC--CCccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||.... +..+...++....+++|+.++..+.+++. +.+ .+++++||...+..
T Consensus 87 li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~----------------- 149 (254)
T PRK07478 87 AFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA----------------- 149 (254)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-----------------
Confidence 9999997521 11122234456778999988887766543 343 36777887654311
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH-----HHhhcccceeecCCCcccHhhHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-----TKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-----~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
+.+....|+.||.+.+.+++.+.. ..++++..+.|+.+-.+.. +. ...... .. ....+...+|++++
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~va~~ 226 (254)
T PRK07478 150 GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAG--LH-ALKRMAQPEEIAQA 226 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHh--cC-CCCCCcCHHHHHHH
Confidence 112346799999999999888643 3479999999988865521 00 000000 00 01234568899999
Q ss_pred HHHHHhcc----CCceeeecCC
Q 005949 578 SIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~ 595 (668)
++.++... .+.++.+.++
T Consensus 227 ~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 227 ALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred HHHHcCchhcCCCCCeEEeCCc
Confidence 99988643 2345555443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.6e-12 Score=122.85 Aligned_cols=181 Identities=13% Similarity=0.143 Sum_probs=127.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
+.++||||+|.||.+++++|.++|++| ..+..|++|.+++.++++.. ++|+||
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li 90 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILV 90 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 479999999999999999999999864 23467899988888877753 689999
Q ss_pred EcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 437 h~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|+||..... ..+...++....+++|+.++.++++++... + .+++++||...+.+.
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------ 152 (253)
T PRK08993 91 NNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG------------------ 152 (253)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC------------------
Confidence 999975211 112234556778999999999999987542 2 367888887665321
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcc-------cceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY-------NKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.....|+.+|...|.+.+.+.. ..++++..++|+.+.-+.. ..+... ..... ..-+.-.+|+|++++
T Consensus 153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~--~~~~~~~~~~~~~~~~~p-~~r~~~p~eva~~~~ 229 (253)
T PRK08993 153 IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNT--QQLRADEQRSAEILDRIP-AGRWGLPSDLMGPVV 229 (253)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcch--hhhccchHHHHHHHhcCC-CCCCcCHHHHHHHHH
Confidence 1124799999999998887643 3589999999998865531 111000 00011 123455789999999
Q ss_pred HHHhcc
Q 005949 580 EMAKRN 585 (668)
Q Consensus 580 ~~~~~~ 585 (668)
.++...
T Consensus 230 ~l~s~~ 235 (253)
T PRK08993 230 FLASSA 235 (253)
T ss_pred HHhCcc
Confidence 998753
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.7e-12 Score=118.74 Aligned_cols=154 Identities=19% Similarity=0.260 Sum_probs=115.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|+||||||+|.||..++++|+++| ...|++++|....+....+.. .....++.++++|+.+.+.+.++++. .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g-~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRG-ARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcC-ceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 668888888611111111111 11235789999999999998887742 4
Q ss_pred CCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
.+|+|||+||...... ..++....++.|+.+...+.+++...+ -.++|++||.....+...
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~-------------- 144 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSPG-------------- 144 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSSTT--------------
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCCCC--------------
Confidence 7899999999866322 223345788999999999999888743 689999999766543322
Q ss_pred CChhHHHHHHHHHHHHHHHHh
Q 005949 156 TNPYSATKAGAEMLVMAYGRS 176 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~ 176 (668)
...|+.+|...+.+++.++.+
T Consensus 145 ~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp BHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHh
Confidence 346999999999999998765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.6e-12 Score=125.93 Aligned_cols=194 Identities=14% Similarity=0.099 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-c------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-F------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||..+++.|.++|++ | .++..|+++++++.++++.. ++|
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 86 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLD 86 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 57999999999999999999999987 4 12557889988888877754 589
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||...... .+...+.....+++|+.++.++++++... + -.++++||...+++.
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--------------- 151 (260)
T PRK06198 87 ALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ--------------- 151 (260)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC---------------
Confidence 9999999762111 11123334566889999999999888542 2 257777776655321
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-HHHH--------hhcccceeecCCCcccHhhH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-FITK--------ISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-~~~~--------~~~~~~~~~~~~~~~~v~D~ 574 (668)
+..+.|+.+|...|.+++.+.. ..++++..++|+.++++.. .... +............+.+.+|+
T Consensus 152 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PRK06198 152 ---PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEV 228 (260)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHH
Confidence 1236799999999999887532 3569999999999887742 1111 01000000011245679999
Q ss_pred HHHHHHHHhcc----CCceeeecCC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+++++.++... .+.+|++.++
T Consensus 229 a~~~~~l~~~~~~~~~G~~~~~~~~ 253 (260)
T PRK06198 229 ARAVAFLLSDESGLMTGSVIDFDQS 253 (260)
T ss_pred HHHHHHHcChhhCCccCceEeECCc
Confidence 99999988543 3445666553
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.7e-12 Score=124.23 Aligned_cols=192 Identities=17% Similarity=0.180 Sum_probs=131.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++|+||||+|+||..++++|+++|++| .++.+|+++.+++.+++++. ++|++
T Consensus 16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l 95 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDIL 95 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999853 34668899988888777754 57999
Q ss_pred EEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 436 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
||+||.... +.......+.+..+++|+.++.++++++.. .+ .+++++||...+.+.
T Consensus 96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------ 157 (258)
T PRK06935 96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG------------------ 157 (258)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC------------------
Confidence 999997521 111122334556788999998888877653 33 367888887655221
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc-----eeec-CCCcccHhhHHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-----VVNI-PNSMTVLDELLPISIE 580 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-----~~~~-~~~~~~v~D~a~~~~~ 580 (668)
+....|+.+|...|.+++.+.+ ..++++..++|+.+..+.. ........ .... ...+...+|++.++..
T Consensus 158 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (258)
T PRK06935 158 KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANT--APIRADKNRNDEILKRIPAGRWGEPDDLMGAAVF 235 (258)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccch--hhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 1235799999999999888743 3579999999998776531 10000000 0001 1245567899999998
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+.++.+.++
T Consensus 236 l~s~~~~~~~G~~i~~dgg 254 (258)
T PRK06935 236 LASRASDYVNGHILAVDGG 254 (258)
T ss_pred HcChhhcCCCCCEEEECCC
Confidence 88643 3445665554
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.5e-12 Score=123.85 Aligned_cols=182 Identities=18% Similarity=0.173 Sum_probs=124.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||+++++.|+++|++| .++.+|+++++++.++++.. ++|+|
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~v 86 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDIL 86 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999854 24568899988888877754 68999
Q ss_pred EEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 436 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
||+||...... ...........+++|+.++.++++++... + .+++++||+.... .+.
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------------~~~ 149 (263)
T PRK08226 87 VNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM-----------------VAD 149 (263)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------------cCC
Confidence 99999751101 11122334456889999999999987642 2 3677777753210 011
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc----------ce-eecC-CCcccHhhH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN----------KV-VNIP-NSMTVLDEL 574 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~----------~~-~~~~-~~~~~v~D~ 574 (668)
+....|+.+|...|.+++.+.. ..++++..++|+.+..+.. ..+.... .. ...+ ..+...+|+
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v 227 (263)
T PRK08226 150 PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMA--ESIARQSNPEDPESVLTEMAKAIPLRRLADPLEV 227 (263)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHH--HhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHH
Confidence 2235799999999998887642 2479999999999887731 1111000 00 0001 134568899
Q ss_pred HHHHHHHHhc
Q 005949 575 LPISIEMAKR 584 (668)
Q Consensus 575 a~~~~~~~~~ 584 (668)
+++++.++..
T Consensus 228 a~~~~~l~~~ 237 (263)
T PRK08226 228 GELAAFLASD 237 (263)
T ss_pred HHHHHHHcCc
Confidence 9999888753
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.2e-12 Score=124.60 Aligned_cols=192 Identities=19% Similarity=0.137 Sum_probs=129.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 90 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI 90 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999854 24567888888887776643 6899
Q ss_pred EEEcccccCCCC----------------ccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCC
Q 005949 435 VFNAAGVTGRPN----------------VDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAA 493 (668)
Q Consensus 435 Vih~a~~~~~~~----------------~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~ 493 (668)
|||+||...... .+....+....+++|+.++..+++++. +.+ .+++++||...+.
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~---- 166 (278)
T PRK08277 91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT---- 166 (278)
T ss_pred EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC----
Confidence 999999652111 011223445678899999987766653 333 4788888876552
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhh-cc-cc-------e
Q 005949 494 HPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKIS-RY-NK-------V 561 (668)
Q Consensus 494 ~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~-~~-~~-------~ 561 (668)
+.+....|+.+|...+.+++.+.. ..++++..+.|+.+..+.. ..+. .. +. .
T Consensus 167 --------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~ 230 (278)
T PRK08277 167 --------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN--RALLFNEDGSLTERANKI 230 (278)
T ss_pred --------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch--hhhhccccccchhHHHHH
Confidence 122345799999999998887632 3589999999998887741 1111 00 00 0
Q ss_pred -eec-CCCcccHhhHHHHHHHHHhc-c----CCceeeecCC
Q 005949 562 -VNI-PNSMTVLDELLPISIEMAKR-N----LRGIWNFTNP 595 (668)
Q Consensus 562 -~~~-~~~~~~v~D~a~~~~~~~~~-~----~~g~~ni~~~ 595 (668)
... ..-+...+|+|++++.++.. . .+.++.+.+|
T Consensus 231 ~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 231 LAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred hccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 001 12345688999999998875 2 3445555544
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.2e-12 Score=122.69 Aligned_cols=189 Identities=15% Similarity=0.103 Sum_probs=130.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|.||..+++.|.++|++|. .+.+|+++++++.++++.+ ++
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 89 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGL 89 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5799999999999999999999998642 2356888988887777654 58
Q ss_pred CEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||.... +......++....+++|+.++.++++++.. .+ .+++++||...+.+
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~---------------- 153 (257)
T PRK09242 90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH---------------- 153 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC----------------
Confidence 999999996411 112233455667889999999999988753 33 36778888654421
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
..+.+.|+.+|...+.+++.+. ...++++..+.|+.+..+.. +........ . ..-+...+|++
T Consensus 154 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~va 227 (257)
T PRK09242 154 --VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERT---P-MRRVGEPEEVA 227 (257)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcC---C-CCCCcCHHHHH
Confidence 1233679999999999988764 23589999999998877641 111111100 0 11233478999
Q ss_pred HHHHHHHhcc----CCceeeecC
Q 005949 576 PISIEMAKRN----LRGIWNFTN 594 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~ 594 (668)
.++..++... .+..+++.+
T Consensus 228 ~~~~~l~~~~~~~~~g~~i~~~g 250 (257)
T PRK09242 228 AAVAFLCMPAASYITGQCIAVDG 250 (257)
T ss_pred HHHHHHhCcccccccCCEEEECC
Confidence 9999888643 234555543
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.8e-12 Score=124.66 Aligned_cols=181 Identities=11% Similarity=0.111 Sum_probs=127.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+++++||||+|+||+++++.|+++|++| ..+.+|++|++++.+++++. ++|
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 90 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLD 90 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 3689999999999999999999999854 34567899988888777654 569
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+....+....+++|+.++.++++++.. .+. +++++||...+.+
T Consensus 91 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------- 153 (256)
T PRK06124 91 ILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA----------------- 153 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC-----------------
Confidence 99999997521 011122334556788999999999977754 343 6777777653311
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H------HHHhhcccceeecCCCcccHhhHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------ITKISRYNKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------~~~~~~~~~~~~~~~~~~~v~D~a~ 576 (668)
.+....|+.+|...+.+++.+.. ..++++..++|+.+..+.. . ...+.. . .. ...+.+.+|+++
T Consensus 154 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~a~ 228 (256)
T PRK06124 154 -RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQ-R--TP-LGRWGRPEEIAG 228 (256)
T ss_pred -CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHh-c--CC-CCCCCCHHHHHH
Confidence 11225799999999998877532 2479999999998887741 1 111111 0 11 124678999999
Q ss_pred HHHHHHhcc
Q 005949 577 ISIEMAKRN 585 (668)
Q Consensus 577 ~~~~~~~~~ 585 (668)
+++.++...
T Consensus 229 ~~~~l~~~~ 237 (256)
T PRK06124 229 AAVFLASPA 237 (256)
T ss_pred HHHHHcCcc
Confidence 999999754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=124.26 Aligned_cols=178 Identities=17% Similarity=0.095 Sum_probs=122.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++|+
T Consensus 41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~ 120 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI 120 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999864 24568999998888887732 6799
Q ss_pred EEEcccccCCCCccc---cccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDW---CESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 435 Vih~a~~~~~~~~~~---~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|||+||......... ...+....+++|+.|+.++++++. +.+. +++++||..++.+.
T Consensus 121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 185 (293)
T PRK05866 121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--------------- 185 (293)
T ss_pred EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC---------------
Confidence 999999762101000 112335578899999888888764 4443 67777775544210
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
.+..+.|+.+|...+.++..+. ...++++..++|+.+-.+. ...... .........+++|+.++.+++
T Consensus 186 --~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~--~~~~~~-----~~~~~~~~pe~vA~~~~~~~~ 256 (293)
T PRK05866 186 --SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPM--IAPTKA-----YDGLPALTADEAAEWMVTAAR 256 (293)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcc--cccccc-----ccCCCCCCHHHHHHHHHHHHh
Confidence 1123679999999998877753 3458999999998665542 111100 001123568999999999998
Q ss_pred cc
Q 005949 584 RN 585 (668)
Q Consensus 584 ~~ 585 (668)
+.
T Consensus 257 ~~ 258 (293)
T PRK05866 257 TR 258 (293)
T ss_pred cC
Confidence 64
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.3e-12 Score=123.09 Aligned_cols=185 Identities=13% Similarity=0.069 Sum_probs=125.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~----~~d~Vi 436 (668)
++++||||+|+||..++++|+++|++| .++.+|++|++++.++++.. ++|+||
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv 85 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLI 85 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 579999999999999999999999865 24567899988877766643 579999
Q ss_pred EcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||..... ..+.........+++|+.|+.++++++... + .+++++||...+.+ ..
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------------~~ 147 (263)
T PRK09072 86 NNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG------------------YP 147 (263)
T ss_pred ECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC------------------CC
Confidence 999976210 011223344567889999999999998642 2 35677777543311 11
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccCC
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLR 587 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~ 587 (668)
....|+.+|...+.++..+. ...++++..+.|+.+..+.. .... ..............+|+|++++.++++...
T Consensus 148 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~--~~~~-~~~~~~~~~~~~~~~~va~~i~~~~~~~~~ 224 (263)
T PRK09072 148 GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMN--SEAV-QALNRALGNAMDDPEDVAAAVLQAIEKERA 224 (263)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccch--hhhc-ccccccccCCCCCHHHHHHHHHHHHhCCCC
Confidence 23579999999888776653 23578999998887655421 1110 000001122355689999999999997655
Q ss_pred ce
Q 005949 588 GI 589 (668)
Q Consensus 588 g~ 589 (668)
++
T Consensus 225 ~~ 226 (263)
T PRK09072 225 ER 226 (263)
T ss_pred EE
Confidence 44
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=122.54 Aligned_cols=192 Identities=14% Similarity=0.139 Sum_probs=128.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||+++++.|+++|++| ..+.+|+++++++.++++.+ ++|++
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 86 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVL 86 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEE
Confidence 579999999999999999999999854 34568899988887777654 58999
Q ss_pred EEcccccCCCCc--cccccccccceehhhhhhHHHHHHHH----HcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPNV--DWCESHKTDTIRTNVAGTLTLADVCR----DHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 436 ih~a~~~~~~~~--~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
||+||....+.. ....+.....+++|+.++..+++++. +.+.+++++||...+.. .
T Consensus 87 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~ 148 (272)
T PRK08589 87 FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA------------------D 148 (272)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC------------------C
Confidence 999997621111 11222334567789998887777754 33457888888654421 1
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc------ce-----eecC-CCcccHhhH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN------KV-----VNIP-NSMTVLDEL 574 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~------~~-----~~~~-~~~~~v~D~ 574 (668)
+....|+.||...+.+++.+.. ..++++..+.|+.+..+. ...+.... .. ...+ .-+...+|+
T Consensus 149 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (272)
T PRK08589 149 LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL--VDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEV 226 (272)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch--hhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHH
Confidence 1235799999999999888642 357999999999887552 11111000 00 0011 134568999
Q ss_pred HHHHHHHHhcc----CCceeeecCC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+++++.++... .+..+.+.++
T Consensus 227 a~~~~~l~s~~~~~~~G~~i~vdgg 251 (272)
T PRK08589 227 AKLVVFLASDDSSFITGETIRIDGG 251 (272)
T ss_pred HHHHHHHcCchhcCcCCCEEEECCC
Confidence 99999988643 3345555544
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.6e-12 Score=123.02 Aligned_cols=192 Identities=15% Similarity=0.093 Sum_probs=130.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.+++++|+++|++| ..+.+|++|.+++.++++.+ ++|+
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 87 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDY 87 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 479999999999999999999999754 34568999988888877765 6899
Q ss_pred EEEcccccCCC--CccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP--NVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~--~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||....+ ..+...++....+++|+.++..+++++. +.+. +++++||...+.+
T Consensus 88 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~----------------- 150 (253)
T PRK06172 88 AFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA----------------- 150 (253)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-----------------
Confidence 99999975211 1122344566778899999987776543 3333 6777777665522
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc-------eeecCCCcccHhhHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-------VVNIPNSMTVLDELLPI 577 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~v~D~a~~ 577 (668)
.+....|+.+|...|.+++.+.. ..++++..+.|+.+-.+. ......... ......-+...+|++..
T Consensus 151 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~ 227 (253)
T PRK06172 151 -APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM--FRRAYEADPRKAEFAAAMHPVGRIGKVEEVASA 227 (253)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh--hhhhcccChHHHHHHhccCCCCCccCHHHHHHH
Confidence 12236799999999998887643 357999999998876553 111111000 00001134568999999
Q ss_pred HHHHHhcc----CCceeeecCC
Q 005949 578 SIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~ 595 (668)
+++++... .+..+++.++
T Consensus 228 ~~~l~~~~~~~~~G~~i~~dgg 249 (253)
T PRK06172 228 VLYLCSDGASFTTGHALMVDGG 249 (253)
T ss_pred HHHHhCccccCcCCcEEEECCC
Confidence 99988643 3445666654
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.8e-12 Score=119.78 Aligned_cols=175 Identities=15% Similarity=0.071 Sum_probs=123.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc---CCCEEEEcccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV---KPTHVFNAAGV 441 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~---~~d~Vih~a~~ 441 (668)
|++++||||+|+||+++++.|+++|++| .++.+|+++.+++++++... ++|+|||++|.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 4689999999999999999999999864 34678999998888765433 58999999997
Q ss_pred cCCCC---ccccccccccceehhhhhhHHHHHHHHHc----CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 442 TGRPN---VDWCESHKTDTIRTNVAGTLTLADVCRDH----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 442 ~~~~~---~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
..... .....++....+++|+.++.++++++... +..++++||...+.+.. +..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------~~~~~~~ 145 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------------TGTTGWL 145 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------------cCCCccc
Confidence 52110 11134456778999999999999999752 33677777764331110 1111246
Q ss_pred chhhHHHHHHHHHhccC-eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 515 YSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|+.+|...+.+++.+.. ..++++..+.|+.+.-+.. + .......++.++.++.++...
T Consensus 146 Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~------~-------~~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 146 YRASKAALNDALRAASLQARHATCIALHPGWVRTDMG------G-------AQAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred cHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCC------C-------CCCCCCHHHHHHHHHHHHHhc
Confidence 99999999999988743 3368888888876655421 1 012345788888888887653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.1e-12 Score=122.21 Aligned_cols=192 Identities=16% Similarity=0.135 Sum_probs=126.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc---------------ccccccCChhHHHHHhhhc-CCCEEEEcccccC--CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------YGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTG--RP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~--~~ 445 (668)
++++||||+|+||.++++.|+++|++|. .+..|++++ ++++++.. ++|+|||+||... .+
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~ag~~~~~~~ 83 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD--LEPLFDWVPSVDILCNTAGILDDYKP 83 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHH--HHHHHHhhCCCCEEEECCCCCCCCCC
Confidence 5799999999999999999999998652 344566665 45555544 5799999999541 11
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
..+...++....+++|+.++.++++++... + .+++++||...+.+ ......|+.+|.
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~Y~~sK~ 145 (235)
T PRK06550 84 LLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA------------------GGGGAAYTASKH 145 (235)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC------------------CCCCcccHHHHH
Confidence 122334456677899999999999988642 2 36778887654421 112357999999
Q ss_pred HHHHHHHhccC---eeEeEEeeeecCCCCChhh---HHHH-hhcccceeecCCCcccHhhHHHHHHHHHhcc----CCce
Q 005949 521 MVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FITK-ISRYNKVVNIPNSMTVLDELLPISIEMAKRN----LRGI 589 (668)
Q Consensus 521 ~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~~~-~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~ 589 (668)
..+.+...+.. ..++++..++|+.+..+.. +... +.+.-........+...+|+|++++.++... .+.+
T Consensus 146 a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~ 225 (235)
T PRK06550 146 ALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTI 225 (235)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcE
Confidence 98888777543 3489999999999876641 1110 0000000001123556899999999998643 3345
Q ss_pred eeecCC
Q 005949 590 WNFTNP 595 (668)
Q Consensus 590 ~ni~~~ 595 (668)
+.+.++
T Consensus 226 ~~~~gg 231 (235)
T PRK06550 226 VPIDGG 231 (235)
T ss_pred EEECCc
Confidence 555544
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.5e-12 Score=122.58 Aligned_cols=192 Identities=16% Similarity=0.077 Sum_probs=129.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.++++.|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDI 89 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 479999999999999999999999864 24568899998888777653 6899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||...... .+...+.....+++|+.++..+++++... + ..++++||..... ...
T Consensus 90 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~------------- 154 (253)
T PRK05867 90 AVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHI--INV------------- 154 (253)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcC--CCC-------------
Confidence 999999762111 11122344556789999999999988542 2 3466666643210 000
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H---HHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F---ITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~---~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
+ .....|+.+|...+.+++.+.. ..++++..+.|+.+-.+.. + ....... .. ...+...+|+|++++
T Consensus 155 ~-~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~---~~-~~r~~~p~~va~~~~ 229 (253)
T PRK05867 155 P-QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPK---IP-LGRLGRPEELAGLYL 229 (253)
T ss_pred C-CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhc---CC-CCCCcCHHHHHHHHH
Confidence 0 1225799999999999988743 3589999999988866531 1 1111110 01 124566899999999
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
.++... .+.++.+.+|
T Consensus 230 ~L~s~~~~~~tG~~i~vdgG 249 (253)
T PRK05867 230 YLASEASSYMTGSDIVIDGG 249 (253)
T ss_pred HHcCcccCCcCCCeEEECCC
Confidence 998643 3456666654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-11 Score=121.92 Aligned_cols=194 Identities=15% Similarity=0.079 Sum_probs=131.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.+++++|+++|++| ..+.+|++|++++++++... ++|+
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 90 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDI 90 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 479999999999999999999999854 34578999999888877653 5899
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||.... +..+...++....+++|+.++..+.+++.. .+ .+++++||..... +
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~ 152 (265)
T PRK07097 91 LVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL------------------G 152 (265)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC------------------C
Confidence 9999997621 111223445567788999999988888754 23 3677777753221 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHh--hccc--ce------eecCCCcccHhhHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKI--SRYN--KV------VNIPNSMTVLDELL 575 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~--~~~~--~~------~~~~~~~~~v~D~a 575 (668)
..+...|+.+|...+.+++.+.+ ..++++..+.|+.+..+..--... ..+. .. ......+...+|+|
T Consensus 153 ~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 232 (265)
T PRK07097 153 RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLA 232 (265)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHH
Confidence 12236799999999999988743 358999999999987763210000 0000 00 00012355678999
Q ss_pred HHHHHHHhcc----CCceeeecCC
Q 005949 576 PISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~ 595 (668)
.+++.++... .+..+++.++
T Consensus 233 ~~~~~l~~~~~~~~~g~~~~~~gg 256 (265)
T PRK07097 233 GPAVFLASDASNFVNGHILYVDGG 256 (265)
T ss_pred HHHHHHhCcccCCCCCCEEEECCC
Confidence 9999998752 2334555443
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.6e-12 Score=123.59 Aligned_cols=181 Identities=12% Similarity=0.112 Sum_probs=124.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||.+++++|+++|++| .++.+|++|++++.++++++ ++|+
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~ 89 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV 89 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999864 23457999998888877764 5799
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|||+||.... +..+...++....+++|+.++.++++++.. .+-+++++||...+. +.
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~------------------~~ 151 (264)
T PRK07576 90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV------------------PM 151 (264)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc------------------CC
Confidence 9999985410 011222344556788999999999998864 234677788754331 11
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc-------ceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN-------KVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~v~D~a~~~~ 579 (668)
+....|+.+|...|.+++.+.. ..++++..++|+.+.+...... ....+ .... .......+|+|++++
T Consensus 152 ~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~ 229 (264)
T PRK07576 152 PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMAR-LAPSPELQAAVAQSVP-LKRNGTKQDIANAAL 229 (264)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhh-cccCHHHHHHHHhcCC-CCCCCCHHHHHHHHH
Confidence 2336799999999999887632 3579999999987764321111 11000 0111 123556799999999
Q ss_pred HHHhc
Q 005949 580 EMAKR 584 (668)
Q Consensus 580 ~~~~~ 584 (668)
.++..
T Consensus 230 ~l~~~ 234 (264)
T PRK07576 230 FLASD 234 (264)
T ss_pred HHcCh
Confidence 99874
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.5e-12 Score=128.96 Aligned_cols=159 Identities=15% Similarity=-0.003 Sum_probs=106.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++|+||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.. ++
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 96 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI 96 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence 589999999999999999999999854 24467899998888777654 58
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhh----hHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAG----TLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~----~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|+|||+||....+ .....+..+..+++|+.+ +..+++.+++.+. ++|++||...+.+..... . ......
T Consensus 97 D~li~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~----~-~~~~~~ 170 (306)
T PRK06197 97 DLLINNAGVMYTP-KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHF----D-DLQWER 170 (306)
T ss_pred CEEEECCccccCC-CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCc----c-ccCccc
Confidence 9999999976211 122234556678899999 6667777766544 777888775432111110 0 011112
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEee--eecCCCCCh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRM--PISSDLNNP 548 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~--~r~~~~~g~ 548 (668)
+..+.+.|+.||.+.+.+.+.+.+. .++++.. +.|+.+..+
T Consensus 171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 3345578999999999988876432 3444443 467766543
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.8e-12 Score=122.81 Aligned_cols=181 Identities=15% Similarity=0.125 Sum_probs=122.3
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccc---------------------------ccccccCChhHHHHHhhhc-----CC
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------------YGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~---------------------------~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+++||||+|+||.++++.|+++|++|. .+.+|++|++++.++++.. ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 489999999999999999999998651 2446888888887777653 57
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhh----hhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVA----GTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~----~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||....... +...++....+++|+. ++.+++.++++.+. +++++||...+...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~--------------- 145 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE--------------- 145 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC---------------
Confidence 999999997621111 1112233456778887 77888888877665 67777776655321
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc-----CeeEeEEeeeecCCCCChhh--HHHHhhc------ccceeecCCCcccHhh
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRN--FITKISR------YNKVVNIPNSMTVLDE 573 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~--~~~~~~~------~~~~~~~~~~~~~v~D 573 (668)
+....|+.+|...+.+++.+. +..++++..+.|+.+.+|.. +...+.. ..... ....+...+|
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 221 (251)
T PRK07069 146 ---PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV-PLGRLGEPDD 221 (251)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC-CCCCCcCHHH
Confidence 123569999999999887753 22358999999998887742 1111100 00000 1124567899
Q ss_pred HHHHHHHHHhc
Q 005949 574 LLPISIEMAKR 584 (668)
Q Consensus 574 ~a~~~~~~~~~ 584 (668)
++++++.++..
T Consensus 222 va~~~~~l~~~ 232 (251)
T PRK07069 222 VAHAVLYLASD 232 (251)
T ss_pred HHHHHHHHcCc
Confidence 99999988764
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=121.57 Aligned_cols=195 Identities=16% Similarity=0.114 Sum_probs=130.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|.++|++| ..+..|++|++++.++++.+ ++|
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 88 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALT 88 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999754 23567888988888777754 479
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||....... +...++....+++|+.++..+++++.. .+ .+++++||...+.+.
T Consensus 89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 152 (254)
T PRK06114 89 LAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN---------------- 152 (254)
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC----------------
Confidence 99999997621111 122345567788999999888777643 33 367778776543211
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh----HHHHhhcccceeecCCCcccHhhHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN----FITKISRYNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
+..+...|+.+|...+.+++.+.. ..++++..+.|+.+..+.. +............ -.-+...+|++.+++.
T Consensus 153 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p-~~r~~~~~dva~~~~~ 231 (254)
T PRK06114 153 RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTP-MQRMAKVDEMVGPAVF 231 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCC-CCCCcCHHHHHHHHHH
Confidence 111235799999999998887642 4689999999998876631 1110000000001 1134457999999999
Q ss_pred HHhcc----CCceeeecCC
Q 005949 581 MAKRN----LRGIWNFTNP 595 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~ 595 (668)
++... .+.++.+.++
T Consensus 232 l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 232 LLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred HcCccccCcCCceEEECcC
Confidence 88643 3445665554
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.9e-12 Score=138.56 Aligned_cols=197 Identities=14% Similarity=0.055 Sum_probs=130.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhc-----C
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
.++++||||+|+||+++++.|+++|++|. .+.+|++|++++.++++.. +
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~ 493 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGG 493 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 35799999999999999999999998641 3468999999988888764 6
Q ss_pred CCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcC--CcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHG--ILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
+|+|||+||...... ......+....+++|+.+...+++.+. +.+ .++|++||...+.+
T Consensus 494 iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~-------------- 559 (676)
T TIGR02632 494 VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA-------------- 559 (676)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC--------------
Confidence 899999999762111 111122334567788888777665443 333 46888888654311
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCC-ChhhH----HH-Hhhc-c------ccee---ecC
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLN-NPRNF----IT-KISR-Y------NKVV---NIP 565 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~-g~~~~----~~-~~~~-~------~~~~---~~~ 565 (668)
.+....|+.||...|.+++.+.. ..++++..+.|+.+. +...+ .. .... + .... ..-
T Consensus 560 ----~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l 635 (676)
T TIGR02632 560 ----GKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL 635 (676)
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc
Confidence 11236899999999999988643 357999999998775 22111 00 0000 0 0000 011
Q ss_pred CCcccHhhHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 566 NSMTVLDELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 566 ~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
..+++.+|+|+++..++... .+.++++.+|..
T Consensus 636 ~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 636 KRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 24577899999999887642 356788877643
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1e-11 Score=110.76 Aligned_cols=218 Identities=17% Similarity=0.214 Sum_probs=152.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
.++|+.|+.||.|+++++..... ++.|..+.+......+. .....+.++.+|......+...+ .++..|+-
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~~l~-----sw~~~vswh~gnsfssn~~k~~l--~g~t~v~e 123 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQTLS-----SWPTYVSWHRGNSFSSNPNKLKL--SGPTFVYE 123 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcchhh-----CCCcccchhhccccccCcchhhh--cCCcccHH
Confidence 47899999999999999999999 67888888875422222 22346788888887777666666 68888988
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+++.. .+...+.++|-....+-.+++.+.+ +++|+|+|-. -||-.. ..| ..|-.+|+.+
T Consensus 124 ~~ggf------gn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~-d~~~~~------------~i~-rGY~~gKR~A 182 (283)
T KOG4288|consen 124 MMGGF------GNIILMDRINGTANINAVKAAAKAG-VPRFVYISAH-DFGLPP------------LIP-RGYIEGKREA 182 (283)
T ss_pred HhcCc------cchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhh-hcCCCC------------ccc-hhhhccchHH
Confidence 88764 3445667788888888889999987 9999999853 222221 122 3699999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--C---hHHHHHHHHHcCC-----CceeecCCCceEeceeHHHHHHHHH
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--K---LIPKFILLAMRGL-----PLPIHGDGSNVRSYLYCEDVAEAFE 236 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~v~D~a~ai~ 236 (668)
|..+.. .++.+-++||||.+||-..... . .+...+....+.. .+++. +....+.+.++++|.+.+
T Consensus 183 E~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal 257 (283)
T KOG4288|consen 183 EAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAAL 257 (283)
T ss_pred HHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHH
Confidence 998875 3478899999999999743211 1 1222222222222 23333 335678899999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHH
Q 005949 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICK 267 (668)
Q Consensus 237 ~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~ 267 (668)
.+++.+...+ .+++.|+.+.-.+
T Consensus 258 ~ai~dp~f~G--------vv~i~eI~~~a~k 280 (283)
T KOG4288|consen 258 KAIEDPDFKG--------VVTIEEIKKAAHK 280 (283)
T ss_pred HhccCCCcCc--------eeeHHHHHHHHHH
Confidence 9999886533 3677777665443
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.4e-11 Score=116.63 Aligned_cols=168 Identities=10% Similarity=0.059 Sum_probs=117.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++++||||++.||.++++.|+++ +++|++.+|... .++..... .....+..+.+|+.|.+++.+++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~--~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQS--ALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 678888887542 22111110 1123567889999999998776632
Q ss_pred --C-CCCEEEEcCccCCccc-----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 --E-SIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 --~-~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
. ++|++||+||...... +.++....+..|+.++..+++.+ ++.+.-..+|++||...+.
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------- 149 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--------- 149 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---------
Confidence 3 6999999998532211 12233446677877776665433 3322236899999854321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCC
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGP 192 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~ 192 (668)
+...|+.+|...+.+.+..+.+ +++++..+.||.+-.+
T Consensus 150 --------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 150 --------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 1346999999999999887764 4899999999988776
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-11 Score=122.98 Aligned_cols=194 Identities=12% Similarity=0.110 Sum_probs=121.8
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHH----HHHhhh----c
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSL----IADVQS----V 430 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~----~~~l~~----~ 430 (668)
.++||||+|+||.++++.|+++|++|. .+.+|++|++++ ++.++. +
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~ 82 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF 82 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence 599999999999999999999998642 245788888654 333332 1
Q ss_pred -CCCEEEEcccccCCCCc-ccccc-----------ccccceehhhhhhHHHHHHHHHcC-----------CcEEEEecce
Q 005949 431 -KPTHVFNAAGVTGRPNV-DWCES-----------HKTDTIRTNVAGTLTLADVCRDHG-----------ILMMNYATGC 486 (668)
Q Consensus 431 -~~d~Vih~a~~~~~~~~-~~~~~-----------~~~~~~~~Nv~~~~~ll~~~~~~~-----------~~~v~~sS~~ 486 (668)
++|+|||+||....... +.... +....+++|+.++..+.+++.... ..+++++|..
T Consensus 83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~ 162 (267)
T TIGR02685 83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM 162 (267)
T ss_pred CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence 58999999996511000 01111 123568899999999998875432 1233444432
Q ss_pred eEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhc-cccee
Q 005949 487 IFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISR-YNKVV 562 (668)
Q Consensus 487 vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~-~~~~~ 562 (668)
.. .+.+....|+.||...|.+++.+.. ..++++..++|+.+..|..+-..... .....
T Consensus 163 ~~------------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~ 224 (267)
T TIGR02685 163 TD------------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKV 224 (267)
T ss_pred cc------------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhC
Confidence 11 1223446899999999999988643 36899999999887555332111110 00011
Q ss_pred ecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 563 NIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 563 ~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
.........+|++++++.++... .+..+++.++.
T Consensus 225 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~ 262 (267)
T TIGR02685 225 PLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL 262 (267)
T ss_pred CCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence 11112456899999999988643 33455555443
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.9e-12 Score=126.40 Aligned_cols=158 Identities=14% Similarity=0.037 Sum_probs=113.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||.++++.|+++|++| .++.+|++|.+++.++++.+ ++
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~i 94 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPI 94 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 589999999999999999999999854 34567999998888776653 57
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHH----HcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|++||+||....+......+..+..+.+|+.|...|.+.+. +...++|++||...+.+..... . ..++.+
T Consensus 95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~-----~-~~~~~~ 168 (313)
T PRK05854 95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWD-----D-LNWERS 168 (313)
T ss_pred cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcc-----c-cccccc
Confidence 99999999763221122345566778999999887777765 3345788888875543221110 1 122233
Q ss_pred CCCCCcchhhHHHHHHHHHhccC-----eeEeEEeeeecCCCCC
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNN 547 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g 547 (668)
..+...|+.||...+.+.+.+.+ ..++++..+.|+.+..
T Consensus 169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 44557899999999999887642 2478999999987753
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.5e-12 Score=123.18 Aligned_cols=194 Identities=14% Similarity=0.115 Sum_probs=129.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||.++++.|+++|++| .++.+|++|++++.++++.. ++
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 87 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPL 87 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999864 23557899988888777753 68
Q ss_pred CEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||.... +......++....+++|+.++.++++++.. .+ .+++++||...+..
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 151 (260)
T PRK07063 88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI---------------- 151 (260)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC----------------
Confidence 999999996511 011122334556788999999999998753 23 36788888654311
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHh-----hcccceeecC-CCcccHhhHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKI-----SRYNKVVNIP-NSMTVLDELL 575 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~-----~~~~~~~~~~-~~~~~v~D~a 575 (668)
.+....|+.+|...+.+.+.+.. ..++++..+.|+.+-.+.. +.... .........+ .-+...+|+|
T Consensus 152 --~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va 229 (260)
T PRK07063 152 --IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVA 229 (260)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHH
Confidence 12235799999999999888632 3589999999988765531 11000 0000000011 1244578999
Q ss_pred HHHHHHHhcc----CCceeeecCC
Q 005949 576 PISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~ 595 (668)
.+++.++... .+..+.+.++
T Consensus 230 ~~~~fl~s~~~~~itG~~i~vdgg 253 (260)
T PRK07063 230 MTAVFLASDEAPFINATCITIDGG 253 (260)
T ss_pred HHHHHHcCccccccCCcEEEECCC
Confidence 9999988643 3345555544
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.9e-11 Score=103.57 Aligned_cols=217 Identities=17% Similarity=0.134 Sum_probs=144.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+.+..+||||+..||++++..|.++ +.+|.+.++....+ ...++. ...+-..+.||+.+.+++...+++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~ata~~L~---g~~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEATAGDLG---GYGDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHHHHhhcC---CCCccceeeeccCcHHHHHHHHHHHHHh
Confidence 3468999999999999999999999 67777666543211 122221 113456779999998887765532
Q ss_pred -CCCCEEEEcCccCC----cccccCChHHHHHHHHHHHHHHHHHHHHc-----CCCcEEEEEcCcc-ccCCCCCCcCCCC
Q 005949 79 -ESIDTIMHFAAQTH----VDNSFGNSFEFTKNNIYGTHVLLEACKVT-----GQIRRFIHVSTDE-VYGETDEDAVVGN 147 (668)
Q Consensus 79 -~~~d~Vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~v~~SS~~-vyg~~~~~~~~~~ 147 (668)
..++++++|||... ..+..+++...+.+|+.|+..+.+++.+. ...-++|.+||+- -.|+..
T Consensus 88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G------- 160 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG------- 160 (256)
T ss_pred cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc-------
Confidence 36999999999754 45667888899999999999888877654 1123899999943 223322
Q ss_pred CCCCCCCCCChhHHHHHHHHH----HHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 148 HEASQLLPTNPYSATKAGAEM----LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~----~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
...|+++|.-.-- ++++.+++ ++++.++-||.|-.|... .+-+.+...+...-|+.-
T Consensus 161 --------QtnYAAsK~GvIgftktaArEla~k-nIrvN~VlPGFI~tpMT~--~mp~~v~~ki~~~iPmgr-------- 221 (256)
T KOG1200|consen 161 --------QTNYAASKGGVIGFTKTAARELARK-NIRVNVVLPGFIATPMTE--AMPPKVLDKILGMIPMGR-------- 221 (256)
T ss_pred --------chhhhhhcCceeeeeHHHHHHHhhc-CceEeEeccccccChhhh--hcCHHHHHHHHccCCccc--------
Confidence 3458777754332 33333333 899999999999988652 334455555555544332
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
+-..+|+|.+++.+..... .+..+.+.+|
T Consensus 222 -~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 222 -LGEAEEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred -cCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence 2357799999887774332 2455655543
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.7e-12 Score=122.82 Aligned_cols=182 Identities=13% Similarity=0.166 Sum_probs=122.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc---------C
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV---------K 431 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~---------~ 431 (668)
|++++||||+|+||+.++++|+++|++| .++.+|++++++++++++.+ .
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 4689999999999999999999999853 35678999998888877654 1
Q ss_pred CCEEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 432 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
+.++||+||.... +.......+....+++|+.++..+++.+.. .+ .+++++||..++
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--------------- 145 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK--------------- 145 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc---------------
Confidence 2278999986521 001223345566788899987766666543 22 257777775433
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC-----eeEeEEeeeecCCCCChhhHHHHhhc--cccee--------ecCCCc
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISR--YNKVV--------NIPNSM 568 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~--~~~~~--------~~~~~~ 568 (668)
.+.++...|+.+|...|.+++.+.. ..++++..++|+.+-.+. ...... ..... ....-+
T Consensus 146 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (251)
T PRK06924 146 ---NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM--QAQIRSSSKEDFTNLDRFITLKEEGKL 220 (251)
T ss_pred ---CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh--HHHHHhcCcccchHHHHHHHHhhcCCc
Confidence 1223446899999999999887632 357999999998776543 111110 00000 001235
Q ss_pred ccHhhHHHHHHHHHhc
Q 005949 569 TVLDELLPISIEMAKR 584 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~ 584 (668)
...+|+|++++.++..
T Consensus 221 ~~~~dva~~~~~l~~~ 236 (251)
T PRK06924 221 LSPEYVAKALRNLLET 236 (251)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 6789999999999875
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=118.89 Aligned_cols=180 Identities=12% Similarity=0.050 Sum_probs=124.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++|+||||+|+||.++++.|+++|++| ..+.+|+++++++++++++. .+|.+
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~i 85 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGL 85 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999743 45678899988888777653 36999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
||+++.... ......+.....++.|+.+..++++.+... +.+++++||...... +.++.
T Consensus 86 i~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------------~~~~~ 147 (238)
T PRK05786 86 VVTVGGYVE-DTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK-----------------ASPDQ 147 (238)
T ss_pred EEcCCCcCC-CchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc-----------------CCCCc
Confidence 999985411 111112344566789999988888887653 446777777543210 11233
Q ss_pred CcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 513 SFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
..|+.+|...+.+++.+.. ..++++++++|+.++++...-. ... ........++..+|++++++.++..
T Consensus 148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-~~~--~~~~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-NWK--KLRKLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-hhh--hhccccCCCCCHHHHHHHHHHHhcc
Confidence 5799999999988777643 3489999999999998742110 000 0111123456788999999999865
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=120.08 Aligned_cols=175 Identities=13% Similarity=0.092 Sum_probs=119.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-Ccc--------------------------cccccccCChhHHHHHhhhc----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG-IPF--------------------------EYGKGRLEDCSSLIADVQSV----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g-~~v--------------------------~~~~~D~~d~~~~~~~l~~~----~~ 432 (668)
++|+||||+|+||.+++++|+++| ++| .++.+|++|++++++.++.. ++
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i 88 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV 88 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence 579999999999999999999985 532 34567888888766655532 68
Q ss_pred CEEEEcccccCCCCcccccccc---ccceehhhhhhHH----HHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHK---TDTIRTNVAGTLT----LADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~---~~~~~~Nv~~~~~----ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
|++||++|.... ......++ ...+++|+.++.. ++..+++.+. +++++||...+.
T Consensus 89 d~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~--------------- 151 (253)
T PRK07904 89 DVAIVAFGLLGD--AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER--------------- 151 (253)
T ss_pred CEEEEeeecCCc--hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence 999999987621 11111122 2357899988877 5666666654 777888864321
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhc---cCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHH
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEY---DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~---~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
+.+....|+.||.....+.+.+ .+..++++.+++|+.+..+. ..... . ....+..+|+|+.++.+
T Consensus 152 ---~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~--~~~~~---~----~~~~~~~~~~A~~i~~~ 219 (253)
T PRK07904 152 ---VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRM--SAHAK---E----APLTVDKEDVAKLAVTA 219 (253)
T ss_pred ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecch--hccCC---C----CCCCCCHHHHHHHHHHH
Confidence 1122357999999998766554 23468999999999887642 21111 0 11235689999999999
Q ss_pred HhccCC
Q 005949 582 AKRNLR 587 (668)
Q Consensus 582 ~~~~~~ 587 (668)
+.++..
T Consensus 220 ~~~~~~ 225 (253)
T PRK07904 220 VAKGKE 225 (253)
T ss_pred HHcCCC
Confidence 987544
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.7e-11 Score=121.77 Aligned_cols=181 Identities=12% Similarity=0.106 Sum_probs=122.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
|+++||||+|+||.++++.|+++|++|. ++.+|++|++++.++++.. ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999998541 2457888888877666653 479
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||.... +..+...++....+++|+.++.++++++.. . +.+++++||...+.+
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---------------- 144 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA---------------- 144 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----------------
Confidence 99999996511 011223344567789999999999999742 1 246777877643311
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhh-cc----cc-----eeecCCCcccHhh
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKIS-RY----NK-----VVNIPNSMTVLDE 573 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~-~~----~~-----~~~~~~~~~~v~D 573 (668)
.+....|+.+|...+.+..... ...++++..++|+.+.++. ..... .+ .+ ........+..+|
T Consensus 145 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (272)
T PRK07832 145 --LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL--VNTVEIAGVDREDPRVQKWVDRFRGHAVTPEK 220 (272)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc--hhcccccccCcchhhHHHHHHhcccCCCCHHH
Confidence 1123579999997777665542 2468999999999988763 11110 00 00 0001223467899
Q ss_pred HHHHHHHHHhc
Q 005949 574 LLPISIEMAKR 584 (668)
Q Consensus 574 ~a~~~~~~~~~ 584 (668)
+|++++.++.+
T Consensus 221 vA~~~~~~~~~ 231 (272)
T PRK07832 221 AAEKILAGVEK 231 (272)
T ss_pred HHHHHHHHHhc
Confidence 99999999964
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-11 Score=119.94 Aligned_cols=182 Identities=17% Similarity=0.145 Sum_probs=120.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|.||.++++.|+++|+++ .++..|++|.+++.++++.. ++|
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 87 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLD 87 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999854 23467899988887777653 689
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHH----HHHcC--CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADV----CRDHG--ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~----~~~~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||..... ............+++|+.++.+++++ +.+.+ .+++++||...+
T Consensus 88 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------------ 149 (261)
T PRK08936 88 VMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------------ 149 (261)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------------
Confidence 999999976211 11112234456688998887765554 45544 367777774322
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh---HHH-Hh-hcccceeecCCCcccHhhHHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN---FIT-KI-SRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~---~~~-~~-~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.+.+....|+.+|...+.+.+.+. ...++++..++|+.+..+.. +.. .. ....... ....+...+|+++++
T Consensus 150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~va~~~ 228 (261)
T PRK08936 150 IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMI-PMGYIGKPEEIAAVA 228 (261)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcC-CCCCCcCHHHHHHHH
Confidence 123344689999987777666642 23589999999998876631 100 00 0000001 112455688999999
Q ss_pred HHHHhc
Q 005949 579 IEMAKR 584 (668)
Q Consensus 579 ~~~~~~ 584 (668)
..++..
T Consensus 229 ~~l~s~ 234 (261)
T PRK08936 229 AWLASS 234 (261)
T ss_pred HHHcCc
Confidence 998864
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.1e-10 Score=112.77 Aligned_cols=225 Identities=15% Similarity=0.048 Sum_probs=137.7
Q ss_pred CCCCeEEEEcC--CChhHHHHHHHHHHhCCCCEEEEEcCCCc-c---------CCccccCCCc---CCCCeEEEEccC--
Q 005949 4 YTPKNILITGA--AGFIASHVCNRLIRNYPEYKIVVLDKLDY-C---------SNLKNLIPSK---ASSNFKFVKGDI-- 66 (668)
Q Consensus 4 ~~~~~vLVtGg--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~-~---------~~~~~~~~~~---~~~~~~~~~~Dl-- 66 (668)
+++|++||||| +..||.++++.|.++ |.+|++ .|... - ..+....... .......+.+|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 56899999999 799999999999999 677777 32210 0 0000000000 011245678888
Q ss_pred CCH------------------HHHHHHhc----c-CCCCEEEEcCccCC------cccccCChHHHHHHHHHHHHHHHHH
Q 005949 67 ASA------------------DLVNFLLI----T-ESIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEA 117 (668)
Q Consensus 67 ~d~------------------~~~~~~~~----~-~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~ 117 (668)
.+. +.+.+++. . .++|++||+||... .+...+++...+++|+.++..+.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 322 24444442 1 36899999997422 1233445677899999999998877
Q ss_pred HHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCC
Q 005949 118 CKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGP 192 (668)
Q Consensus 118 ~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~ 192 (668)
+... ..-.++|++||......... ....|+.+|...+.+.+.++.+ +++++..+-||.+-.+
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~~p~-------------~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~ 230 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERIIPG-------------YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSR 230 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCCCCC-------------CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCc
Confidence 6542 11268999999654322110 0125999999999999998764 3689999999988776
Q ss_pred CCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 193 NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
.................. .++ . .+...+|++.+++.++.... .++.+.+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~--~pl-----~--r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 231 AAKAIGFIDDMIEYSYAN--APL-----Q--KELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred hhhcccccHHHHHHHHhc--CCC-----C--CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 432100011111111111 111 1 24578999999999886432 3556666544
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-11 Score=122.86 Aligned_cols=183 Identities=13% Similarity=0.073 Sum_probs=126.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|.||.++++.|.++|++|. .+.+|++|.+++.++++.+ ++|+|
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~v 89 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVV 89 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4799999999999999999999998641 2238999998888777653 68999
Q ss_pred EEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 436 ih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
||+||.... +..+...++....+++|+.++.++++++.. .+.+++++||...+.+ .+
T Consensus 90 I~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~ 151 (296)
T PRK05872 90 VANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA------------------AP 151 (296)
T ss_pred EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC------------------CC
Confidence 999997610 001112233456788999999999999854 2346888888765522 12
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
....|+.||...+.+++.+. ...++++..+.|+.+..+.. ....+... .......+...+|++++++
T Consensus 152 ~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~va~~i~ 229 (296)
T PRK05872 152 GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRAR--LPWPLRRTTSVEKCAAAFV 229 (296)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhh--CCCcccCCCCHHHHHHHHH
Confidence 23679999999999988763 23578999999987765521 00111100 0001124567899999999
Q ss_pred HHHhccC
Q 005949 580 EMAKRNL 586 (668)
Q Consensus 580 ~~~~~~~ 586 (668)
.++.+..
T Consensus 230 ~~~~~~~ 236 (296)
T PRK05872 230 DGIERRA 236 (296)
T ss_pred HHHhcCC
Confidence 9998644
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.2e-11 Score=121.63 Aligned_cols=190 Identities=12% Similarity=0.034 Sum_probs=125.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~----~~d~ 434 (668)
++++||||+|+||++++++|+++|++| ..+.+|++|.+++.++++.. ++|+
T Consensus 13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~ 92 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDI 92 (306)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCE
Confidence 589999999999999999999999754 24567888888887777642 5899
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc------------CCcEEEEecceeEeecCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH------------GILMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------------~~~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
|||+||....... +....+....+++|+.++.++++++..+ ..+++++||...+.+.
T Consensus 93 li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 162 (306)
T PRK07792 93 VVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP---------- 162 (306)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----------
Confidence 9999997621111 1223455667889999999999987531 1257777776543211
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccccee-ecCCCcccHhhHHHH
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVV-NIPNSMTVLDELLPI 577 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~v~D~a~~ 577 (668)
.....|+.+|...+.+++.+.. .+++++..+.|+ ..- .+...+....... .....+...+|++.+
T Consensus 163 --------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t--~~~~~~~~~~~~~~~~~~~~~~pe~va~~ 231 (306)
T PRK07792 163 --------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ART--AMTADVFGDAPDVEAGGIDPLSPEHVVPL 231 (306)
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCC--chhhhhccccchhhhhccCCCCHHHHHHH
Confidence 1235799999999999877643 468999888885 211 1111111110000 111245578999999
Q ss_pred HHHHHhcc----CCceeeecC
Q 005949 578 SIEMAKRN----LRGIWNFTN 594 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~ 594 (668)
+..++... .+.+|.+.+
T Consensus 232 v~~L~s~~~~~~tG~~~~v~g 252 (306)
T PRK07792 232 VQFLASPAAAEVNGQVFIVYG 252 (306)
T ss_pred HHHHcCccccCCCCCEEEEcC
Confidence 98888642 344566654
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.4e-11 Score=118.62 Aligned_cols=203 Identities=19% Similarity=0.209 Sum_probs=142.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|+|+|||||||+|+++++.|+++|++| .+..+|+.++..+...+++. |.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~--~~~~~i~~~~---- 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGV--DGVLLISGLL---- 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccc--cEEEEEeccc----
Confidence 589999999999999999999999965 35567788999999999988 9999998854
Q ss_pred ccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 447 VDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 447 ~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
.... ...........+..+++. .+++ ++++|. ++... ..+ +.|..+|..+|++
T Consensus 75 ----~~~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~---~~~~~----------------~~~-~~~~~~~~~~e~~ 128 (275)
T COG0702 75 ----DGSD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSV---LGADA----------------ASP-SALARAKAAVEAA 128 (275)
T ss_pred ----cccc-chhHHHHHHHHHHHHHhc-CCceEEEEecc---CCCCC----------------CCc-cHHHHHHHHHHHH
Confidence 1111 222333444444444444 2232 333333 32211 122 6899999999999
Q ss_pred HHhccCeeEeEEeeeecCCCCC-hhhH-HHHhhccc-ceeec---CCCcccHhhHHHHHHHHHhcc--CCceeeecCCCc
Q 005949 526 LKEYDNVCTLRVRMPISSDLNN-PRNF-ITKISRYN-KVVNI---PNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGV 597 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g-~~~~-~~~~~~~~-~~~~~---~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~ 597 (668)
+.. .+++.+++|+...|. .... +....... ..... ..+++..+|++.++...+..+ .+.+|.+++++.
T Consensus 129 l~~----sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~ 204 (275)
T COG0702 129 LRS----SGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEA 204 (275)
T ss_pred HHh----cCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCce
Confidence 987 577878888555543 3332 33333332 22222 237899999999999999865 678999999999
Q ss_pred cCHHHHHHHHHhhcCCCCCCCCCCH
Q 005949 598 VSHNEILEMYKKYINPEFKWVNFTL 622 (668)
Q Consensus 598 ~s~~e~~~~i~~~~g~~~~~~~~~~ 622 (668)
.+..++++.+.+..|++..+...+.
T Consensus 205 ~~~~~~~~~l~~~~gr~~~~~~~~~ 229 (275)
T COG0702 205 LTLAELASGLDYTIGRPVGLIPEAL 229 (275)
T ss_pred ecHHHHHHHHHHHhCCcceeeCCcH
Confidence 9999999999999999987654443
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-11 Score=119.30 Aligned_cols=189 Identities=17% Similarity=0.142 Sum_probs=125.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
.++||||+|+||.++++.|+++|+++ .++.+|++|++++.++++.. ++|+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDV 81 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Confidence 58999999999999999999999753 24567888888887776643 5899
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||..... .......+....++.|+.++..+++.+ ++.+. +++++||.....+
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------------ 143 (242)
T TIGR01829 82 LVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG------------------ 143 (242)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC------------------
Confidence 99999965210 011223345566789999988765554 45554 6777777543211
Q ss_pred CCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
......|+.+|...+.+++.+. ...++++..++|+.+..+.. +...+....+ ...+...+|+++++.
T Consensus 144 ~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~ 219 (242)
T TIGR01829 144 QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIP----VGRLGRPEEIAAAVA 219 (242)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCC----CCCCcCHHHHHHHHH
Confidence 1123579999998888777753 23589999999998876631 1111111111 112344689999988
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
.++..+ .+..+.+.++
T Consensus 220 ~l~~~~~~~~~G~~~~~~gg 239 (242)
T TIGR01829 220 FLASEEAGYITGATLSINGG 239 (242)
T ss_pred HHcCchhcCccCCEEEecCC
Confidence 877643 3456666655
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.5e-11 Score=121.57 Aligned_cols=179 Identities=15% Similarity=0.106 Sum_probs=117.4
Q ss_pred EEEcCCChhHHHHHHHHHHhCCC-CEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----CCC
Q 005949 10 LITGAAGFIASHVCNRLIRNYPE-YKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-----ESI 81 (668)
Q Consensus 10 LVtGgtG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 81 (668)
|||||++.||.++++.|+++ + ++|++.+|.... ....... ....++.++.+|+.|.+++.+++.. .++
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 76 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLK--AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPL 76 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 69999999999999999998 5 788888875321 1111111 1123578889999999998777642 368
Q ss_pred CEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHH----HcCC-CcEEEEEcCccccCCCC-C--Cc--CCC
Q 005949 82 DTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQ-IRRFIHVSTDEVYGETD-E--DA--VVG 146 (668)
Q Consensus 82 d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~~v~~SS~~vyg~~~-~--~~--~~~ 146 (668)
|++||+||..... ...++....+++|+.|+..+.+.+. +.+. ..++|++||...+-... . .+ ..+
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 156 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG 156 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence 9999999974321 1233456788999999877765543 3221 36999999976542110 0 00 000
Q ss_pred --------C-CC-------CCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCC
Q 005949 147 --------N-HE-------ASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGP 192 (668)
Q Consensus 147 --------~-~e-------~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~ 192 (668)
. ++ .....+...|+.||.+.+.+.+.++.+ .++.++.+.||.|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 222 (308)
T PLN00015 157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT 222 (308)
T ss_pred hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence 0 00 011223456999999977777776654 3799999999999643
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-11 Score=118.44 Aligned_cols=181 Identities=16% Similarity=0.082 Sum_probs=123.0
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
|+||||+|+||.++++.|.++|++| .++..|++|.+++.++++.. +.|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999753 34578899988887776642 56999
Q ss_pred EEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH-----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR-----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 436 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~-----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
||+||...... ......++...+++|+.++.++++++. +.+ .+++++||...+.+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------------ 142 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG------------------ 142 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC------------------
Confidence 99999652111 122345567789999999999998763 122 36777877654321
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
.+....|+.+|...+.+.+.+.. ..++++..++|+.+..+.. +............. .-+...+|+++++.+++.
T Consensus 143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~ 221 (239)
T TIGR01831 143 NRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPM-NRMGQPAEVASLAGFLMS 221 (239)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence 11235799999998887776532 3579999999998876641 11111100000111 123457999999999987
Q ss_pred cc
Q 005949 584 RN 585 (668)
Q Consensus 584 ~~ 585 (668)
..
T Consensus 222 ~~ 223 (239)
T TIGR01831 222 DG 223 (239)
T ss_pred ch
Confidence 53
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-11 Score=116.84 Aligned_cols=177 Identities=13% Similarity=0.093 Sum_probs=116.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccC--ChhHHHHHhhhc-----C
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLE--DCSSLIADVQSV-----K 431 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~--d~~~~~~~l~~~-----~ 431 (668)
++|+||||+|+||.+++++|+++|++|. ++.+|++ +++++.++++.+ +
T Consensus 13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 92 (247)
T PRK08945 13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR 92 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999998652 2334553 444444443322 5
Q ss_pred CCEEEEcccccCCCC--ccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPN--VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~--~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
+|+|||+|+...... .+.........+++|+.++.++++++. +.+. +++++||.....+
T Consensus 93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-------------- 158 (247)
T PRK08945 93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG-------------- 158 (247)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC--------------
Confidence 799999999752100 111223456678899999999888874 3444 5666676543211
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHH
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
......|+.||...|.+++.+. ...++++..+.++.+..+.. ...... .....+.-.+|+++++..+
T Consensus 159 ----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~ 228 (247)
T PRK08945 159 ----RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMR--ASAFPG----EDPQKLKTPEDIMPLYLYL 228 (247)
T ss_pred ----CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcch--hhhcCc----ccccCCCCHHHHHHHHHHH
Confidence 1123579999999999888763 23478999999987765521 111111 1122455678999999998
Q ss_pred Hhc
Q 005949 582 AKR 584 (668)
Q Consensus 582 ~~~ 584 (668)
+..
T Consensus 229 ~~~ 231 (247)
T PRK08945 229 MGD 231 (247)
T ss_pred hCc
Confidence 864
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.6e-11 Score=121.77 Aligned_cols=145 Identities=15% Similarity=0.166 Sum_probs=108.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~ 443 (668)
++++||||+|+||.++++.|+++|++| ..+..|++|++++.++++.. ++|+|||+||...
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 89 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINI 89 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccC
Confidence 579999999999999999999999865 24567999999888877754 6899999999652
Q ss_pred CCC----------ccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 444 RPN----------VDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 444 ~~~----------~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
... .....++....+++|+.++.++++++..+ + .+++++||...+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 151 (266)
T PRK06171 90 PRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG------------------ 151 (266)
T ss_pred CccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC------------------
Confidence 100 01223344567889999999999998753 2 35777787654421
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCC
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLN 546 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~ 546 (668)
......|+.+|...+.+++.+.. ..++++..+.|+.+.
T Consensus 152 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 152 SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 12236899999999999888642 358999999998763
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=108.75 Aligned_cols=265 Identities=12% Similarity=0.046 Sum_probs=169.8
Q ss_pred EEEEEcCCcchhHHHHH-----HHHHcC----CcccccccccCChhHHHHH--hhhc--CCCEEEEccccc-CCCCcccc
Q 005949 385 KFLIYGRTGWIGGLLGK-----LCEKEG----IPFEYGKGRLEDCSSLIAD--VQSV--KPTHVFNAAGVT-GRPNVDWC 450 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~-----~l~~~g----~~v~~~~~D~~d~~~~~~~--l~~~--~~d~Vih~a~~~-~~~~~~~~ 450 (668)
+.++-+++|+|+..|.. ++-..+ |.|+++...-....-.... ..+. .++.++|+++.. ..|-.+|+
T Consensus 14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~~~Gip~sc~a~vna~g~n~l~P~rRWs 93 (315)
T KOG3019|consen 14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELDFPGIPISCVAGVNAVGNNALLPIRRWS 93 (315)
T ss_pred cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhcCCCCceehHHHHhhhhhhccCchhhcC
Confidence 56777889999988876 333333 5565554332211111001 1111 236777777755 44455777
Q ss_pred ccccccceehhhhhhHHHHHHHHHcCC---cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHH
Q 005949 451 ESHKTDTIRTNVAGTLTLADVCRDHGI---LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLK 527 (668)
Q Consensus 451 ~~~~~~~~~~Nv~~~~~ll~~~~~~~~---~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~ 527 (668)
..-.++.+...+..|..|+++..+..- ..|.+|..++|-...... |.|++ +....+...+--+.+|..+.
T Consensus 94 p~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~e------Y~e~~-~~qgfd~~srL~l~WE~aA~ 166 (315)
T KOG3019|consen 94 PEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQE------YSEKI-VHQGFDILSRLCLEWEGAAL 166 (315)
T ss_pred HHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccc------ccccc-ccCChHHHHHHHHHHHHHhh
Confidence 777888888999999999999988743 466667767774433222 45554 33333455554455666555
Q ss_pred hccCeeEeEEeeeecCCCCChh-hHHH------Hhhcccce--eecCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCc
Q 005949 528 EYDNVCTLRVRMPISSDLNNPR-NFIT------KISRYNKV--VNIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGV 597 (668)
Q Consensus 528 ~~~~~~~l~~~~~r~~~~~g~~-~~~~------~~~~~~~~--~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~ 597 (668)
...+ ..|++++|.+.+.|.+ ..+. ++-.+++. -.++..+||++|++..+.++++++ ..|++|-..+.+
T Consensus 167 ~~~~--~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~ 244 (315)
T KOG3019|consen 167 KANK--DVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNP 244 (315)
T ss_pred ccCc--ceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCc
Confidence 5444 3899999998887765 1111 12223322 134558999999999999999985 899999999999
Q ss_pred cCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhcc--CCC-----CCccChhHHHhhcC--CccChHHHHHHHH
Q 005949 598 VSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVA--PRS-----NNEMDASKLKKEFP--ELLSIKDSLIKYV 661 (668)
Q Consensus 598 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~-----~~~ld~~k~~~~~g--~~~~~~~~l~~~~ 661 (668)
++..||.+.+.+.++.+.. .++| ++...... .+. +.+.-..|..+++. +++..+++|++++
T Consensus 245 ~~n~Ef~q~lg~aL~Rp~~-~pvP--~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 245 VRNGEFCQQLGSALSRPSW-LPVP--DFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred cchHHHHHHHHHHhCCCcc-cCCc--HHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHh
Confidence 9999999999999998763 3333 22222111 221 44556777777766 5688889988765
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-11 Score=134.48 Aligned_cols=184 Identities=15% Similarity=0.105 Sum_probs=127.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|.++|++| .++.+|++|++++.++++.+ ++|+
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 395 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI 395 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 689999999999999999999999864 34568999999988887764 5899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||...... .+...++....+++|+.|+.++++++.. .+ .++|++||...|.+
T Consensus 396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------------- 458 (582)
T PRK05855 396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP----------------- 458 (582)
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----------------
Confidence 999999762111 1122345566788999999999987643 22 47889999877632
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhh-ccc----------c-eeecCCCcccHh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKIS-RYN----------K-VVNIPNSMTVLD 572 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~-~~~----------~-~~~~~~~~~~v~ 572 (668)
.+..+.|+.||...+.++..+. ...++++..+.|+.+-.+. ..... .+. . ......-....+
T Consensus 459 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 535 (582)
T PRK05855 459 -SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI--VATTRFAGADAEDEARRRGRADKLYQRRGYGPE 535 (582)
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc--hhccccCCcccchhhhHHhhhhhhccccCCCHH
Confidence 1234689999999888877653 2368999999998775542 11100 000 0 000011123468
Q ss_pred hHHHHHHHHHhccCC
Q 005949 573 ELLPISIEMAKRNLR 587 (668)
Q Consensus 573 D~a~~~~~~~~~~~~ 587 (668)
|+|++++.++.++..
T Consensus 536 ~va~~~~~~~~~~~~ 550 (582)
T PRK05855 536 KVAKAIVDAVKRNKA 550 (582)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999886544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 668 | ||||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 4e-70 | ||
| 4egb_A | 346 | 3.0 Angstrom Resolution Crystal Structure Of Dtdp-G | 2e-65 | ||
| 1bxk_A | 355 | Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = | 2e-64 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 5e-64 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 1e-61 | ||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 1e-60 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 3e-53 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 9e-27 | ||
| 2p5u_A | 311 | Crystal Structure Of Thermus Thermophilus Hb8 Udp-G | 2e-25 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 2e-24 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 5e-24 | ||
| 2pzj_A | 377 | Crystal Structure Of The Bordetella Bronchiseptica | 2e-23 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 2e-23 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 2e-23 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 4e-23 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 4e-23 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 6e-23 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 6e-23 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-23 | ||
| 2b69_A | 343 | Crystal Structure Of Human Udp-Glucoronic Acid Deca | 7e-23 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-22 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 1e-22 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-22 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 4e-22 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 5e-22 | ||
| 1orr_A | 347 | Crystal Structure Of Cdp-tyvelose 2-epimerase Compl | 4e-21 | ||
| 2pk3_A | 321 | Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose | 5e-21 | ||
| 3lu1_A | 364 | Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4- | 3e-20 | ||
| 3ru9_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-20 | ||
| 3ru7_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 3e-20 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 6e-20 | ||
| 3ruc_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 9e-20 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 1e-18 | ||
| 3sxp_A | 362 | Crystal Structure Of Helicobacter Pylori Adp-L-Glyc | 5e-16 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 5e-14 | ||
| 3m2p_A | 311 | The Crystal Structure Of Udp-N-Acetylglucosamine 4- | 3e-13 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 6e-11 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 1e-10 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 2e-10 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 3e-10 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 3e-10 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 6e-10 | ||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 8e-10 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-09 | ||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 2e-09 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 2e-09 | ||
| 1wvg_A | 359 | Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal | 2e-09 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 2e-09 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 3e-09 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 3e-09 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 4e-09 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 2e-08 | ||
| 1rkx_A | 357 | Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose | 7e-08 | ||
| 1db3_A | 372 | E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | 1e-06 | ||
| 2bll_A | 345 | Apo-Structure Of The C-Terminal Decarboxylase Domai | 2e-06 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 2e-06 | ||
| 1z75_A | 358 | Crystal Structure Of Arna Dehydrogenase (decarboxyl | 2e-06 | ||
| 1u9j_A | 358 | Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl | 2e-06 | ||
| 1z74_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 2e-06 | ||
| 1z7b_A | 358 | Crystal Structure Of E.Coli Arna Dehydrogenase (Dec | 2e-06 | ||
| 1t2a_A | 375 | Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr | 2e-06 | ||
| 1z73_A | 358 | Crystal Structure Of E. Coli Arna Dehydrogenase (de | 3e-06 | ||
| 1z7e_A | 660 | Crystal Structure Of Full Length Arna Length = 660 | 3e-06 | ||
| 2q1w_A | 333 | Crystal Structure Of The Bordetella Bronchiseptica | 5e-06 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 5e-06 | ||
| 3slg_A | 372 | Crystal Structure Of Pbgp3 Protein From Burkholderi | 8e-06 | ||
| 4f6l_B | 508 | Crystal Structure Of Aureusimine Biosynthetic Clust | 9e-06 | ||
| 4f6c_A | 427 | Crystal Structure Of Aureusimine Biosynthetic Clust | 2e-05 | ||
| 1rpn_A | 335 | Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase | 6e-05 | ||
| 2gn4_A | 344 | Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd | 1e-04 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 6e-04 | ||
| 3rft_A | 267 | Crystal Structure Of Uronate Dehydrogenase From Agr | 7e-04 | ||
| 2z1m_A | 345 | Crystal Structure Of Gdp-D-Mannose Dehydratase From | 8e-04 | ||
| 2pzk_A | 330 | Crystal Structure Of The Bordetella Bronchiseptica | 8e-04 |
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346 | Back alignment and structure |
|
| >pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347 | Back alignment and structure |
|
| >pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321 | Back alignment and structure |
|
| >pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364 | Back alignment and structure |
|
| >pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|1RKX|A Chain A, Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose 4,6- Dehydratase From Yersinia Pseudotuberculosis Length = 357 | Back alignment and structure |
|
| >pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | Back alignment and structure |
|
| >pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358 | Back alignment and structure |
|
| >pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375 | Back alignment and structure |
|
| >pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358 | Back alignment and structure |
|
| >pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660 | Back alignment and structure |
|
| >pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372 | Back alignment and structure |
|
| >pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508 | Back alignment and structure |
|
| >pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427 | Back alignment and structure |
|
| >pdb|1RPN|A Chain A, Crystal Structure Of Gdp-D-Mannose 4,6-Dehydratase In Complexes With Gdp And Nadph Length = 335 | Back alignment and structure |
|
| >pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|3RFT|A Chain A, Crystal Structure Of Uronate Dehydrogenase From Agrobacterium Tumefaciens Length = 267 | Back alignment and structure |
|
| >pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345 | Back alignment and structure |
|
| >pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 668 | |||
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 1e-138 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 1e-138 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 1e-136 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 1e-134 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 1e-130 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 1e-127 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-109 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 1e-101 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 4e-87 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 1e-84 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 1e-05 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 3e-79 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 8e-74 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 3e-73 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 6e-71 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 2e-06 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 4e-66 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 6e-66 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 1e-05 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 3e-63 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 8e-06 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 7e-62 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 5e-59 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 2e-58 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 1e-57 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 2e-04 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 6e-57 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-54 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 1e-07 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 6e-54 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 2e-53 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 6e-53 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 2e-51 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 1e-48 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 3e-06 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 5e-42 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 2e-04 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 2e-41 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 6e-04 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 3e-40 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 1e-07 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 1e-38 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 5e-05 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 1e-31 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 1e-29 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 1e-04 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 6e-29 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 4e-28 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 1e-27 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 2e-27 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 8e-24 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 1e-22 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 6e-21 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 2e-20 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 3e-20 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 1e-18 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 1e-18 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 3e-04 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 3e-17 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 4e-17 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 2e-16 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 4e-15 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 5e-15 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 8e-15 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 3e-11 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 3e-14 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 4e-14 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 4e-09 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 8e-14 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 2e-13 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 4e-09 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 5e-13 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 5e-12 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 1e-09 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 1e-08 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 9e-09 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 1e-08 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 1e-08 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 2e-08 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 2e-08 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 4e-08 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 4e-08 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 1e-07 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 1e-07 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 2e-07 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 4e-07 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 4e-07 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 5e-07 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 6e-07 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 2e-06 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 6e-06 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 7e-06 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 2e-05 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 8e-05 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 6e-05 |
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 408 bits (1050), Expect = e-138
Identities = 136/331 (41%), Positives = 201/331 (60%), Gaps = 10/331 (3%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
+L+TG GFI S+ ++ +P+++++ +DKL Y SN NL + + FVKG
Sbjct: 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKG 61
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+A +LV L+ +D ++H AA++HVD S + F +N+ GT+ LLE+ +
Sbjct: 62 DVADYELVKELV--RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPE 119
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
RF+HVSTDEVYG+ + + E +L+P++PYSATKA ++MLV+ + R+Y L T
Sbjct: 120 VRFVHVSTDEVYGDILKGSF---TENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASIT 176
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244
R N YGP QFPEKLIPK I+ A GL +PI+G G NVR +LY ED A E +L KGE
Sbjct: 177 RCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES 236
Query: 245 GHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRPFNDQRYFLDDQKLTS-LGW 302
+YN+ +E+ ++V K I +L M E I+ VE+RP +D RY LD K+T L W
Sbjct: 237 REIYNISAGEEKTNLEVVKIILRL--MGKGEELIELVEDRPGHDLRYSLDSWKITRDLKW 294
Query: 303 SERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+ ++EG++KTI+WY +N WW +
Sbjct: 295 RPKYTFDEGIKKTIDWYLKNEWWWKPLVDER 325
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 406 bits (1046), Expect = e-138
Identities = 126/327 (38%), Positives = 198/327 (60%), Gaps = 7/327 (2%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
NIL+TG AGFI S+ + ++++Y YKI+ D L Y NL N+ + N+ FVKG
Sbjct: 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKG 82
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
+I + +L+ ++ + I++FAA++HVD S N F N+ GT LLE K
Sbjct: 83 EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-H 141
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ + VSTDEVYG + E + L P +PYS++KA A+M+ +AY ++Y LPVI T
Sbjct: 142 IKLVQVSTDEVYGSLGKTGRF--TEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVT 199
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244
R +N YGP Q+PEKLIP + A+ G LP++GDG NVR +L+ D A + +LHKG V
Sbjct: 200 RCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV 259
Query: 245 GHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRPFNDQRYFLDDQKLTS-LGW 302
G VYN+G E+ ++V + I L + + I++V +R +D+RY ++ +K+ + W
Sbjct: 260 GEVYNIGGNNEKTNVEVVEQIITL--LGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDW 317
Query: 303 SERTIWEEGLRKTIEWYTQNPDWWGDV 329
+ +E+GL++T++WY +N +WW +
Sbjct: 318 EPKYTFEQGLQETVQWYEKNEEWWKPL 344
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 401 bits (1034), Expect = e-136
Identities = 123/332 (37%), Positives = 186/332 (56%), Gaps = 15/332 (4%)
Query: 8 NILITGAAGFIASHVCNRLIRN----YPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+L+TG AGFI SH +L+ P +++VLD L Y N NL P A +FV
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI A L+ L +D I+HFAA++HVD S + FT+ N+ GT LL+ G
Sbjct: 62 GDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG- 118
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ R +HVST++VYG D + E+S L P +PY+A+KAG++++ AY R+YGL V
Sbjct: 119 VGRVVHVSTNQVYGSIDSGSW---TESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
TR N YGP Q PEKLIP F+ + G LP++GDG+NVR +++ +D +L G
Sbjct: 176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR 235
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRPFNDQRYFLDDQKLTS-LG 301
G +Y++G E ++ + + +S++ V +R +D RY LD K+ LG
Sbjct: 236 AGEIYHIGGGLELTNRELTGILLDS--LGADWSSVRKVADRKGHDLRYSLDGGKIERELG 293
Query: 302 WSERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+ + + +GL +T+ WY +N WW + + A
Sbjct: 294 YRPQVSFADGLARTVRWYRENRGWWEPLKATA 325
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 397 bits (1023), Expect = e-134
Identities = 124/341 (36%), Positives = 183/341 (53%), Gaps = 20/341 (5%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + V G
Sbjct: 3 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVG 61
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
DIA A+LV+ L D I+H+AA++H DNS + F N GT+ LLEA +
Sbjct: 62 DIADAELVDKLA--AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-- 117
Query: 125 RRFIHVSTDEVYGETDEDAVVGNH---------EASQLLPTNPYSATKAGAEMLVMAYGR 175
RF HVSTDEVYG+ + H + P++PYS+TKA ++++V A+ R
Sbjct: 118 IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVR 177
Query: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
S+G+ + +N YGP Q EK IP+ I + G+ ++G+G NVR +++ D +
Sbjct: 178 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 237
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMD-PETSIKFVENRPFNDQRYFLDD 294
IL KG +G Y +G E+ +V + I + M P+ + V +R +D RY +D
Sbjct: 238 WAILTKGRMGETYLIGADGEKNNKEVLELILEK--MGQPKDAYDHVTDRAGHDLRYAIDA 295
Query: 295 QKLTS-LGWS-ERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
KL LGW+ + T + EGL +TI+WYT N DWW
Sbjct: 296 SKLRDELGWTPQFTDFSEGLEETIQWYTDNQDWWKAEKEAV 336
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361 | Back alignment and structure |
|---|
Score = 386 bits (995), Expect = e-130
Identities = 138/350 (39%), Positives = 188/350 (53%), Gaps = 28/350 (8%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITG AGFI S V R I + +V +DKL Y NL++L S+ + F DI
Sbjct: 2 KILITGGAGFIGSAVV-RHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-- 125
+ + + D +MH AA++HVD S F + NI GT+ LLE +
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 126 ------RFIHVSTDEVYG---ETDEDAVVGNH----EASQLLPTNPYSATKAGAEMLVMA 172
RF H+STDEVYG DE E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 173 YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232
+ R+YGLP I T +N YGP FPEKLIP IL A+ G PLPI+G G +R +LY ED A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMD--------PETSIKFVENRP 284
A ++ +G+ G YN+G E++ +DV IC L +D I +V +RP
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDL--LDEIVPKATSYREQITYVADRP 298
Query: 285 FNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWWGDV-SGA 332
+D+RY +D K++ LGW +E G+RKT+EWY N W +V SGA
Sbjct: 299 GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGA 348
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 378 bits (972), Expect = e-127
Identities = 81/346 (23%), Positives = 150/346 (43%), Gaps = 30/346 (8%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+LITG GF+ S++ + + ++V D L NL + NF+FV GDI
Sbjct: 2 AKLLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI 59
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + V L+ D+ H A Q + S N + N+ GT LLEA +
Sbjct: 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 119
Query: 127 FIHVSTDEVYGETDEDAVVGNH-------------EASQLLPTNPYSATKAGAEMLVMAY 173
I+ ST++VYG+ ++ E++QL +PY +K A+ ++ Y
Sbjct: 120 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 179
Query: 174 GRSYGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMR-----GLPLPIHGDGSNVRSY 225
R +GL + R +++YG QF + + F A+ P I G+G VR
Sbjct: 180 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 239
Query: 226 LYCEDVAEAFECILHKGE--VGHVYNVG--TKKERRVIDVAKDICKLFSMDPETSIKFVE 281
L+ ED+ + L G+ +N+G ++++ K + + + +
Sbjct: 240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDY--CNIDMRFTNLP 297
Query: 282 NRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWW 326
R + + + D +K+T+ + WS + ++G++K +W + +
Sbjct: 298 VRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILEHH 343
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 333 bits (855), Expect = e-109
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 27/344 (7%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
+ N+++ G AGF+ S++ RL+ ++ V+D L + N+ +
Sbjct: 27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVN-QVHVVDNLLS-AEKINV---PDHPAVR 81
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
F + I L+ L + D + H A +S + +NN T L E K
Sbjct: 82 FSETSITDDALLASLQ--DEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSY 177
++++ ++ + E D E + N YS +K E + Y + +
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199
Query: 178 GLPVITTRGNNVYGPNQFP-------------EKLIPKFILLAMRGLPLPIHGDGSNVRS 224
LP + R NVYGP + + P FI A++G+PLP+ G R
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259
Query: 225 YLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP 284
+++ EDVA G G VYN+ + KE + D+A I ++ T + + RP
Sbjct: 260 FIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEI--TGNNTELDRLPKRP 317
Query: 285 FND-QRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWW 326
+++ + F +K LG+S ++GLRKTIEW N
Sbjct: 318 WDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANLAVI 361
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 311 bits (798), Expect = e-101
Identities = 68/324 (20%), Positives = 120/324 (37%), Gaps = 27/324 (8%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
I +TG GF+ +V + + ++L I +KA +++++ D
Sbjct: 3 LKIAVTGGTGFLGQYVVESIKNDG--NTPIILT---------RSIGNKAINDYEYRVSDY 51
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
DL+N L +D ++H AA +N T L +AC I
Sbjct: 52 TLEDLINQL---NDVDAVVHLAATRGSQGKI----SEFHDNEILTQNLYDACYENN-ISN 103
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
++ ST Y + + +E LP Y +K E + Y R GL + R
Sbjct: 104 IVYASTISAYSDETS---LPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRF 160
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
++YG N+ +I +F A G L +H + R +LY +D A++ L + +V
Sbjct: 161 AHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG 220
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL-TSLGWSER 305
+N+G+ +VA I F + N ++D K L +S
Sbjct: 221 TFNIGSGDALTNYEVANTINNAFGNKDN-LLVKNPNANEGIHSSYMDSSKAKELLDFSTD 279
Query: 306 TIWEEGLRKTIEWY---TQNPDWW 326
+ + + P W+
Sbjct: 280 YNFATAVEEIHLLMRGLDDVPLWY 303
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 274 bits (704), Expect = 4e-87
Identities = 85/328 (25%), Positives = 135/328 (41%), Gaps = 38/328 (11%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY--CSNLKNLIPSKASSNFKFVK 63
ILITG AGFI H+ L+ + ++ VLD L + + +
Sbjct: 7 KHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEE 64
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
D++ LV H A+ V SF ++ N + LL C G
Sbjct: 65 RDLSDVRLV------------YHLASHKSVPRSFKQPLDYLDN-VDSGRHLLALCTSVG- 110
Query: 124 IRRFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
+ + + ST EVYG+ T ED+ + P +PY+A+K G EM+ A+ R+
Sbjct: 111 VPKVVVGSTCEVYGQADTLPTPEDSPLS--------PRSPYAASKVGLEMVAGAHQRASV 162
Query: 179 LPVIT-TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
P + R NVYGP + P+ L+P+ + LP+ GDG R + Y DV +
Sbjct: 163 APEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVA 222
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL 297
+ ++ + V N G+ + V DV + + P + + RP + D
Sbjct: 223 LANRP-LPSVVNFGSGQSLSVNDVIRILQAT---SPAAEVARKQPRPNEITEFRADTALQ 278
Query: 298 -TSLGWSERTI-WEEGLRKTIEWYTQNP 323
+G I EEG+R T+EW+
Sbjct: 279 TRQIGERSGGIGIEEGIRLTLEWWQSRD 306
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 271 bits (694), Expect = 1e-84
Identities = 62/369 (16%), Positives = 122/369 (33%), Gaps = 54/369 (14%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-----DYCSNLKNLIPSKASS------ 57
+++ G G+ L + Y++ ++D L D+ L++L P +
Sbjct: 14 VMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71
Query: 58 ------NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTK---NNI 108
+ + GDI + + + D+++HF Q S + NN+
Sbjct: 72 KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 131
Query: 109 YGTHVLLEACKVTGQIRRFIHVSTDEVYGE----TDEDAVVGNHEASQ------LLPTNP 158
GT +L A K G+ + + T YG +E + H ++
Sbjct: 132 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 191
Query: 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL-----------------IP 201
Y +K + +++G+ VYG ++ +
Sbjct: 192 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALN 251
Query: 202 KFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL-HKGEVG--HVYNVGTKKE--R 256
+F + A G PL ++G G R YL D + E + + + G V+N T++
Sbjct: 252 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVN 311
Query: 257 RVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTI 316
+ + +D + + Y KL LG + + L +
Sbjct: 312 ELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLL 371
Query: 317 EWYTQNPDW 325
+ Q D
Sbjct: 372 NFAVQFKDR 380
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 1e-05
Identities = 19/94 (20%), Positives = 27/94 (28%), Gaps = 8/94 (8%)
Query: 452 SHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAH---PEGSGI-----GYK 503
S T NV GTL + ++ G G + EY + EG
Sbjct: 121 SRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTD 180
Query: 504 EEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 537
P SFY +K + +R
Sbjct: 181 TLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRA 214
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 253 bits (650), Expect = 3e-79
Identities = 88/324 (27%), Positives = 144/324 (44%), Gaps = 21/324 (6%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
I++TG AGFI SHV ++L + +IVV+D L N + + + VK D+
Sbjct: 2 SLIVVTGGAGFIGSHVVDKLSESN---EIVVIDNLSS-GNEEFVNE-----AARLVKADL 52
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A+ D+ ++L + + + H AA V N E +NN+ T+ LLEA + G + R
Sbjct: 53 AADDIKDYL---KGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSR 108
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ ST VYGE E P + Y A+K E L+ +Y ++ + R
Sbjct: 109 IVFTSTSTVYGEAKVIPT---PEDYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRF 165
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
NV G + + L L I G+G +SY+Y D +A L E +
Sbjct: 166 ANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVN 225
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFN--DQRY-FLDDQKLTSLGWS 303
++N+G++ + +V +A+ +C+ + P +F D L +KL LGW
Sbjct: 226 IFNIGSEDQIKVKRIAEIVCEELGLSPR--FRFTGGDRGWKGDVPVMLLSIEKLKRLGWK 283
Query: 304 ERTIWEEGLRKTIEWYTQNPDWWG 327
R EE +R + ++ D G
Sbjct: 284 PRYNSEEAVRMAVRDLVEDLDEEG 307
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 8e-74
Identities = 88/332 (26%), Positives = 136/332 (40%), Gaps = 33/332 (9%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
I++TG AGFI SH+ ++L+ Y++VV+D L + + P + + D+
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSS-GRREFVNP-----SAELHVRDLK 53
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ D + HFAA V S N+ T +LE + TG +R
Sbjct: 54 DYSWGAGI----KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTV 108
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
+ S+ VYG+ D V+ E P + Y A KA E++ Y R +G+ + R
Sbjct: 109 VFASSSTVYGDAD---VIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYA 165
Query: 188 NVYGPNQFPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAF----ECILHKG 242
NV GP +I FI+ R L + GDG+ +SYLY D EA +
Sbjct: 166 NVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 224
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY------FLDDQK 296
NVG RV+D+A+ + ++ + I+ V + P L K
Sbjct: 225 APFLALNVGNVDAVRVLDIAQIVAEV--LGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTK 282
Query: 297 L-TSLGWSERTIWEEGLRKTIEWYTQNPDWWG 327
L GW E ++KT E + WG
Sbjct: 283 LMKLTGWRPTMTSAEAVKKTAEDLAKEL--WG 312
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 3e-73
Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 25/334 (7%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLK---NLIPSKASSNF 59
PK LITG AGFI S++ L++ + K+V LD + NL +L+ K SNF
Sbjct: 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 83
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
KF++GDI + D N +D ++H AA V S + NI G +L A +
Sbjct: 84 KFIQGDIRNLDDCNNAC--AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 141
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
++ F + ++ YG+ + E + P +PY+ TK E+ + R YG
Sbjct: 142 DAK-VQSFTYAASSSTYGDHPG---LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGF 197
Query: 180 PVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
I R NV+G Q P +IPK+ ++G + I+GDG R + Y E+ +A
Sbjct: 198 STIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 257
Query: 236 ECILHKGE--VGHVYNVGTKKERRVIDVAKDICKLF---SMDPETSIKFVENRPFNDQRY 290
G VYN+ + + + + + + R D R+
Sbjct: 258 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFRE-GDVRH 316
Query: 291 -FLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQN 322
D K LG++ + G+ + WY
Sbjct: 317 SLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 231 bits (592), Expect = 6e-71
Identities = 63/326 (19%), Positives = 117/326 (35%), Gaps = 31/326 (9%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
IL+TG++G I + + L Y + ++ D I + + KF+ D+++
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASD-----------IVQRDTGGIKFITLDVSN 50
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
D ++ + SID I H A + K N+ GT+ +LEA K + + +
Sbjct: 51 RDEIDRAVEKYSIDAIFHLAGILSAK-GEKDPALAYKVNMNGTYNILEAAKQHR-VEKVV 108
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
ST V+G V + P + TK AE+L Y +GL V + R
Sbjct: 109 IPSTIGVFGPETPKNKV--PSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166
Query: 189 VYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH---- 240
+ P + A++ + + +Y D +A +
Sbjct: 167 IISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP---FNDQRYFLDDQK- 296
K + + YNV ++ I + PE I++ E+ LD +
Sbjct: 227 KLVLRNGYNVTA-YTFTPSELYSKIKERI---PEFEIEYKEDFRDKIAATWPESLDSSEA 282
Query: 297 LTSLGWSERTIWEEGLRKTIEWYTQN 322
G+S + + I+ ++
Sbjct: 283 SNEWGFSIEYDLDRTIDDMIDHISEK 308
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 30/161 (18%)
Query: 387 LIYGRTGWIGG-LLGKLCEKEG----------------IPFEYGKGRLEDCSSLIADVQS 429
L+ G +G IG L+ L EK G I F + + + V+
Sbjct: 3 LVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFI--TLDVSNRDEIDRAVEK 60
Query: 430 VKPTHVFN-AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIF 488
+F+ A ++ + E + N+ GT + + + H + + +
Sbjct: 61 YSIDAIFHLAGILSAK-----GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPST--- 112
Query: 489 EYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529
+ T + + TK E L + Y
Sbjct: 113 --IGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYY 151
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 220 bits (562), Expect = 4e-66
Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 25/334 (7%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLK---NLIPSKASSNF 59
+PK LITG AGFI S++ +L++ ++ LD + NL L+ ++ S F
Sbjct: 24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
F++GDI ++ + +D ++H AA V S + NI G +L A K
Sbjct: 82 CFIEGDIRDLTTCEQVM--KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK 139
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
++ F + ++ YG+ + E + P +PY+ TK E+ Y R+YG
Sbjct: 140 NAQ-VQSFTYAASSSTYGDHPA---LPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGF 195
Query: 180 PVITTRGNNVYGPNQFPEK----LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
I R NV+G Q P +IPK+ ++G + I+GDG R + Y ++V +
Sbjct: 196 KTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN 255
Query: 236 E--CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS---IKFVENRPFNDQRY 290
+ ++YNV + +++ I ++ IK+ E R D R+
Sbjct: 256 ILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRS-GDVRH 314
Query: 291 -FLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQN 322
D K L + EGLR ++ WY +
Sbjct: 315 SQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 6e-66
Identities = 96/321 (29%), Positives = 148/321 (46%), Gaps = 24/321 (7%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+L+TG AGFI SH+ L+ ++ VLD L +N+ F + D+
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLAT-GKRENVPK-----GVPFFRVDLR 53
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ V + H AAQ V S + + N+ G LLEAC+ G + +
Sbjct: 54 DKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKL 112
Query: 128 IHVSTDE-VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ ST +YGE E E P +PY+A+KA E + YG+SYGL ++ R
Sbjct: 113 VFASTGGAIYGEVPEGERA--EETWPPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRY 170
Query: 187 NNVYGPNQFPEK---LIPKFILLAMRGLPLPIHG-----DGSNVRSYLYCEDVAEAFECI 238
NVYGP Q P ++ F ++GLP+ ++ D VR Y+Y DVAEA
Sbjct: 171 GNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT 298
L E +YNVGT + +V + + PE ++ RP + +R L KL
Sbjct: 231 LFSLE--GIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAPPRPGDLERSVLSPLKLM 286
Query: 299 SLGWSERTIWEEGLRKTIEWY 319
+ GW + ++EG+R T++ +
Sbjct: 287 AHGWRPKVGFQEGIRLTVDHF 307
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 1e-05
Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 31/136 (22%)
Query: 406 EGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG------RPNVDWCESHKTDTIR 459
+G+PF + L D + + +PTHV + A P +D+
Sbjct: 43 KGVPFF--RVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDF---------E 91
Query: 460 TNVAGTLTLADVCRDHGILMMNYA-TGCIFEYDAA----HPEGSGIGYKEEDTPNFTGSF 514
N+ G L L + CR +G+ + +A TG A PEG EE P S
Sbjct: 92 VNLLGGLNLLEACRQYGVEKLVFASTG------GAIYGEVPEGERA---EETWPPRPKSP 142
Query: 515 YSKTKAMVEELLKEYD 530
Y+ +KA E L Y
Sbjct: 143 YAASKAAFEHYLSVYG 158
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 3e-63
Identities = 70/322 (21%), Positives = 120/322 (37%), Gaps = 35/322 (10%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
K + ITG G I SH+ L+ K+V +D ++L K N FV+G
Sbjct: 21 MKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFAT-GRREHL---KDHPNLTFVEGS 74
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
IA LVN L+ D ++H AA + + + T N G +++A K +
Sbjct: 75 IADHALVNQLIGDLQPDAVVHTAASYKDPDDW---YNDTLTNCVGGSNVVQAAKKNN-VG 130
Query: 126 RFIHVSTDEVYGET------DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
RF++ T YG D N S Y+ +K+ E Y GL
Sbjct: 131 RFVYFQTALCYGVKPIQQPVRLDHPR-NPANS------SYAISKSANE----DYLEYSGL 179
Query: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239
+T R NV GP +P F G + R +++ +D+A A +
Sbjct: 180 DFVTFRLANVVGPRNVSG-PLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAV 235
Query: 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY-FLDDQKLT 298
Y+ + + + ++ + + ++ + E P +D LD +
Sbjct: 236 DGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGP-DDAPSILLDPSRTI 293
Query: 299 S-LGWSERTIWEEGLRKTIEWY 319
G E T +E + + ++
Sbjct: 294 QDFGKIEFTPLKETVAAAVAYF 315
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 37/177 (20%)
Query: 384 MKFLIYGRTGWIG----------------------GLLGKLCEKEGIPFEYGKGRLEDCS 421
K I G G IG G L + + F +G + D +
Sbjct: 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFV--EGSIADHA 79
Query: 422 SLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMN 481
+ + ++P V + A P+ DW + TN G + + + +
Sbjct: 80 LVNQLIGDLQPDAVVHTAASYKDPD-DW-----YNDTLTNCVGGSNVVQAAKKNNVGRFV 133
Query: 482 YA-TGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-NVCTLR 536
Y T + P + + N S Y+ +K+ E+ L+ + T R
Sbjct: 134 YFQTALCY---GVKPI--QQPVRLDHPRNPANSSYAISKSANEDYLEYSGLDFVTFR 185
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 209 bits (534), Expect = 7e-62
Identities = 74/330 (22%), Positives = 132/330 (40%), Gaps = 28/330 (8%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL---DYCSNLKNL----IPSKASSN 58
+ ILITG AGF+ S++ N+P+ K+VVLDK SN + +
Sbjct: 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFK 69
Query: 59 FKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
+ + DI + + L D + H AA + + N K N LLE
Sbjct: 70 GEVIAADINNPLDLR-RLEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIA 126
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
+ + I+ S+ VYG T N P N Y +K + V+++ S
Sbjct: 127 RSKK--AKVIYASSAGVYGNTK----APNVVGKNESPENVYGFSKLCMDEFVLSH--SND 178
Query: 179 LPVITTRGNNVYGPNQFPEK----LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
+ R NVYGP +F ++ ++ + L AM + + G +R ++Y EDV +A
Sbjct: 179 NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQA 238
Query: 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY-FLD 293
+ + G VYNVG + R ++ + + + + +++N Q++
Sbjct: 239 NVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG---DFKVTYIKNPYAFFQKHTQAH 294
Query: 294 DQKL-TSLGWSERTIWEEGLRKTIEWYTQN 322
+ L ++ E G++ +
Sbjct: 295 IEPTILDLDYTPLYDLESGIKDYLPHIHAI 324
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 5e-59
Identities = 66/321 (20%), Positives = 106/321 (33%), Gaps = 20/321 (6%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
I++TG AGFI S++ L I+V+D L + NL + K D
Sbjct: 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNL--VDLNIADYMDKEDFLI 58
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ ++ I H A + G NN + LL C F+
Sbjct: 59 QIMAGEEF--GDVEAIFHEGACSSTTEWDGK--YMMDNNYQYSKELLHYCLERE--IPFL 112
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
+ S+ YG D + P N Y +K + V ++ R N
Sbjct: 113 YASSAATYGGRTSDFIE---SREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFN 169
Query: 189 VYGPNQFPEK----LIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
VYGP + + + G P G + R ++Y DVA+ L G
Sbjct: 170 VYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG- 228
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY-FLDDQKL-TSLG 301
V ++N+GT + VA I F + Q + D L +
Sbjct: 229 VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288
Query: 302 WSERTIWEEGLRKTIEWYTQN 322
EG+ + + W ++
Sbjct: 289 DKPFKTVAEGVTEYMAWLNRD 309
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 2e-58
Identities = 65/323 (20%), Positives = 107/323 (33%), Gaps = 20/323 (6%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ I++TG AGFI S++ L I+V+D L + NL+ K D
Sbjct: 47 RMIIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVDLNI--ADYMDKEDF 103
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ ++ I H A + G NN + LL C
Sbjct: 104 LIQIMAGEEF--GDVEAIFHEGACSSTTEWDGK--YMMDNNYQYSKELLHYCLERE--IP 157
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F++ S+ YG D + P N + +K + V ++ R
Sbjct: 158 FLYASSAATYGGRTSDFIE---SREYEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRY 214
Query: 187 NNVYGPNQFPEK----LIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241
NVYGP + + + G P G + R ++Y DVA+ L
Sbjct: 215 FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274
Query: 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY-FLDDQKL-TS 299
G V ++N+GT + VA I F + Q + D L +
Sbjct: 275 G-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAA 333
Query: 300 LGWSERTIWEEGLRKTIEWYTQN 322
EG+ + + W ++
Sbjct: 334 GYDKPFKTVAEGVTEYMAWLNRD 356
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 1e-57
Identities = 49/234 (20%), Positives = 80/234 (34%), Gaps = 33/234 (14%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
K +L+TGAAG + + RL ++ L LD A N + V+
Sbjct: 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----------AGPNEECVQC 50
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+A A+ VN ++ D I+H V+ F + NI G + L EA + G
Sbjct: 51 DLADANAVNAMV--AGCDGIVHLGGI-SVEKPFEQILQ---GNIIGLYNLYEAARAHG-Q 103
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
R + S++ G + + P Y +K E L Y +G
Sbjct: 104 PRIVFASSNHTIGYYPQTERL--GPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALV 161
Query: 185 RGNNVYGP------------NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226
R + + LI + G P+ + G +N +
Sbjct: 162 RIGSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPV-VWGASANDAGWW 214
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 456 DTIRTNVAGTLTLADVCRDHGILMMNYA-TGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514
++ N+ G L + R HG + +A + Y +P+ + D P
Sbjct: 82 QILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGY---YPQTERL---GPDVPARPDGL 135
Query: 515 YSKTKAMVEELLKEY 529
Y +K E L + Y
Sbjct: 136 YGVSKCFGENLARMY 150
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 6e-57
Identities = 69/344 (20%), Positives = 122/344 (35%), Gaps = 40/344 (11%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
K +LI G GFI H+ R++ V + L +L+ + F +GD
Sbjct: 24 AKKVLILGVNGFIGHHLSKRILET--TDWEVFGMDM-QTDRLGDLVKHE---RMHFFEGD 77
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I + + D I+ A + + ++ + G +
Sbjct: 78 ITINKEWVEYHVKK-CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--K 134
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP----YSATKAGAEMLVMAYGRSYGLPV 181
+ ST EVYG ++ + A P N Y+ +K + ++ YG GL
Sbjct: 135 HLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM-EGLNF 193
Query: 182 ITTRGNNVYGPNQFPEKL--------IPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233
R N GP + +F+ +RG + + GS R++ Y +D
Sbjct: 194 TLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGIS 253
Query: 234 AFECILHKGE---VGHVYNVGT-KKERRVIDVAKDICKLFSMDPETS-----IKFVENRP 284
A I+ G +YN+G V ++A + +L + PE + +K VE
Sbjct: 254 ALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTS 313
Query: 285 FNDQRYFLDDQKL---------TSLGWSERTIWEEGLRKTIEWY 319
D + LGW+ + +++ LR+ E Y
Sbjct: 314 GAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAY 357
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 1e-54
Identities = 66/319 (20%), Positives = 115/319 (36%), Gaps = 30/319 (9%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITG AG + S++ + ++I+V+D + L P ++G +
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFAT-GKREVLPPVA---GLSVIEGSVT 75
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
A L+ + ++H AA + + N+ G+ + +A G ++R
Sbjct: 76 DAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAA---TNVQGSINVAKAASKAG-VKRL 131
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
++ T YG + S P Y +K E + +PV++ R
Sbjct: 132 LNFQTALCYGRPATVPIP---IDSPTAPFTSYGISKTAGEA----FLMMSDVPVVSLRLA 184
Query: 188 NVYGPNQFP-EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
NV GP IP F G VR +L D + L +G
Sbjct: 185 NVTGPRLAIGP--IPTFYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSLQEGRPTG 239
Query: 247 VYNVGTKKE---RRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGW 302
V+NV T + + V DV D +P + V + LD K + GW
Sbjct: 240 VFNVSTGEGHSIKEVFDVVLDYVGATLAEP---VPVVAPGADDVPSVVLDPSKTETEFGW 296
Query: 303 SERTIWEEGLRKTIEWYTQ 321
+ +++ + + WY +
Sbjct: 297 KAKVDFKDTITGQLAWYDK 315
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 1e-07
Identities = 41/189 (21%), Positives = 58/189 (30%), Gaps = 49/189 (25%)
Query: 377 SSPRKPSMKFLIYGRTGWIGG-----LLGK-----------------LCEKEGIPFEYGK 414
PR M+ LI G G +G L + L G+ +
Sbjct: 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVI--E 71
Query: 415 GRLEDCSSLIADVQSVKPTHVFNAAGVT---GRPNVDWCESHKTDTIRTNVAGTLTLADV 471
G + D L S KPTHV ++A D TNV G++ +A
Sbjct: 72 GSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDA---------ATNVQGSINVAKA 122
Query: 472 CRDHGILMMNYATGCIFEYDAA---HPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528
G+ + A P I D+P + Y +K E L
Sbjct: 123 ASKAGV------KRLLNFQTALCYGRPATVPI---PIDSPTAPFTSYGISKTAGEAFLMM 173
Query: 529 YD-NVCTLR 536
D V +LR
Sbjct: 174 SDVPVVSLR 182
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 6e-54
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 50/333 (15%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 28 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 84
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
V L I +D I H A+ N N + K N GT +L K G R
Sbjct: 85 -----VEPLYI--EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--AR 135
Query: 127 FIHVSTDEVYGE------TDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSY 177
+ ST EVYG+ +++ N P P Y K AE + AY +
Sbjct: 136 LLLASTSEVYGDPEVHPQSEDYWGHVN-------PIGPRACYDEGKRVAETMCYAYMKQE 188
Query: 178 GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
G+ V R N +GP +++ FIL A++G PL ++G GS R++ Y D+
Sbjct: 189 GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQ 295
+++ N+G +E +++ A+ I L + + I+F+ DD
Sbjct: 249 VALMNSNVSS-PVNLGNPEEHTILEFAQLIKNL--VGSGSEIQFLSEAQ--------DDP 297
Query: 296 KL---------TSLGWSERTIWEEGLRKTIEWY 319
+ LGW EEGL K I ++
Sbjct: 298 QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYF 330
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 187 bits (476), Expect = 2e-53
Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 26/327 (7%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
I ITGA GFIASH+ RL + ++ D +++ F V +
Sbjct: 30 LKISITGAGGFIASHIARRLKHE--GHYVIASD----WKKNEHMTEDMFCDEFHLVDLRV 83
Query: 67 ASADLVNFLLITESIDTIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
N L +TE +D + + AA + N NN + ++EA ++ G I+
Sbjct: 84 ME----NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK 138
Query: 126 RFIHVSTDEVYGETDE-DAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSYGLPV 181
RF + S+ +Y E + + + + S P P + K E L Y + +G+
Sbjct: 139 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIEC 198
Query: 182 ITTRGNNVYGPNQFP----EKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFE 236
R +N+YGP EK F A + GDG RS+ + ++ E
Sbjct: 199 RIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL 258
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296
+ V N+G+ + + ++A+ + + + I + P + D+
Sbjct: 259 RLTKSDFREPV-NIGSDEMVSMNEMAEMVLSF--EEKKLPIHHIP-GPEGVRGRNSDNNL 314
Query: 297 LTS-LGWSERTIWEEGLRKTIEWYTQN 322
+ LGW+ +EGLR T W +
Sbjct: 315 IKEKLGWAPNMRLKEGLRITYFWIKEQ 341
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 6e-53
Identities = 72/354 (20%), Positives = 126/354 (35%), Gaps = 57/354 (16%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+LI G GFI +H+ RL+R Y++ LD + + +F FV+GDI+
Sbjct: 2 RVLILGVNGFIGNHLTERLLRE-DHYEVYGLD--IGSDAISRFL---NHPHFHFVEGDIS 55
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ + D ++ A N + + ++ C +R
Sbjct: 56 IHSEWIEYHVKK-CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRI 112
Query: 128 IHVSTDEVYG--------ETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRS 176
I ST EVYG E + +VG P YS +K + ++ AYG
Sbjct: 113 IFPSTSEVYGMCSDKYFDEDHSNLIVGP-------VNKPRWIYSVSKQLLDRVIWAYGEK 165
Query: 177 YGLPVITTRGNNVYGPNQFPEKL--------IPKFILLAMRGLPLPIHGDGSNVRSYLYC 228
GL R N GP I + IL + G P+ + G R +
Sbjct: 166 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 225
Query: 229 EDVAEAFECILHKGE---VGHVYNVG-TKKERRVIDVAKDICKLF-------SMDPETSI 277
D EA I+ G + N+G + E + ++ + + F P
Sbjct: 226 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGF 285
Query: 278 KFVENRPFNDQRYFLDDQKL---------TSLGWSERTIWEEGLRKTIEWYTQN 322
+ VE+ + + Y D + L W + +E + +T++++ +
Sbjct: 286 RVVESSSYYGKGY--QDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 2e-51
Identities = 45/239 (18%), Positives = 89/239 (37%), Gaps = 34/239 (14%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+L+TGAAG + S + L +++ + D + A ++ + V D+
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLA--HEVRLSD---------IVDLGAAEAHEEIVACDL 51
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A A V+ L+ + D I+H V+ + + + NI G + L EA + G R
Sbjct: 52 ADAQAVHDLV--KDCDGIIHLGGV-SVERPWNDILQ---ANIIGAYNLYEAARNLG-KPR 104
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ S++ G + P + Y +K E L Y + + + R
Sbjct: 105 IVFASSNHTIGYYPRTTRI--DTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRI 162
Query: 187 NNVYGPNQFPEKL-----IPKFILLAMRGLPLP------IHGDGSNVRSYLYCEDVAEA 234
+ + + + + F+ L R P ++G +N S+ D ++
Sbjct: 163 GSCFPKPKDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWW---DNDKS 218
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 1e-48
Identities = 54/323 (16%), Positives = 101/323 (31%), Gaps = 22/323 (6%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
ILI GA G I + + +L K+ + + S+++ L + ++ F +
Sbjct: 3 PKILIIGACGQIGTELTQKLR------KLYGTENV-IASDIRKL-NTDVVNSGPFEVVNA 54
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + L+ I I AA N N+ +L K I++
Sbjct: 55 LDFNQIEHLVEVHKITDIYLMAALLSATAE-KNPAFAWDLNMNSLFHVLNLAKAKK-IKK 112
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
S+ V+G T + + P+ Y +K E Y YG+ V + R
Sbjct: 113 IFWPSSIAVFGPTTPKENTPQYTIME--PSTVYGISKQAGERWCEYYHNIYGVDVRSIRY 170
Query: 187 NNVYGPNQFPEK----LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH-- 240
+ + P A+ +Y +D +A I+
Sbjct: 171 PGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230
Query: 241 --KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL- 297
K ++ YN+ ++A +I K T + + +DD +
Sbjct: 231 VEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAR 289
Query: 298 TSLGWSERTIWEEGLRKTIEWYT 320
W E + IE +
Sbjct: 290 EDWDWKHTFDLESMTKDMIEHLS 312
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 39/171 (22%)
Query: 383 SMKFLIYGRTGWIG-GLLGKLCEKEGI-------------------PFEYGKGRLEDCSS 422
+ K LI G G IG L KL + G PFE D +
Sbjct: 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVN--ALDFNQ 59
Query: 423 LIADVQSVKPTHVFN-AA--GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILM 479
+ V+ K T ++ AA T N + N+ + ++ + I
Sbjct: 60 IEHLVEVHKITDIYLMAALLSATAEKNPAFA-------WDLNMNSLFHVLNLAKAKKIKK 112
Query: 480 MNYA-TGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529
+ + + +F + T + Y +K E + Y
Sbjct: 113 IFWPSSIAVFGPTTPKE------NTPQYTIMEPSTVYGISKQAGERWCEYY 157
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 5e-42
Identities = 57/341 (16%), Positives = 109/341 (31%), Gaps = 45/341 (13%)
Query: 8 NILITGAAGFIASHVCNRLIR-----NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFV 62
+I I GAAG + + RL++ P K ++D + P+ S
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID------VFQPEAPAGFSGAVDAR 69
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQ---THVDNSFGNSFEFT-KNNIYGTHVLLEAC 118
D+++ L+ D I H AA + F+ + N+ GT L +A
Sbjct: 70 AADLSAPGEAE-KLVEARPDVIFHLAAIVSGEAELD-----FDKGYRINLDGTRYLFDAI 123
Query: 119 KVTG----QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 174
++ R + S+ V+G + + P Y KA E+L+ Y
Sbjct: 124 RIANGKDGYKPRVVFTSSIAVFGAPLPYPIP---DEFHTTPLTSYGTQKAICELLLSDYS 180
Query: 175 RSYGLPVITTRGNNVYGPNQFPEK----LIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230
R I R + P + + G + S +
Sbjct: 181 RRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS 240
Query: 231 VAEAFE--CILHKGEVGHVYNV-GTKKERRVIDVAKDICKLFSMDPETSIKFVENRP-FN 286
++ +VG N+ V + + + K+ E ++ + P
Sbjct: 241 AVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVA---GEKAVALIRREPNEM 297
Query: 287 DQRYF------LDDQKLTSLGWSERTIWEEGLRKTIEWYTQ 321
R + ++ LG++ + +EE ++ IE
Sbjct: 298 IMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDELG 338
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 33/189 (17%), Positives = 52/189 (27%), Gaps = 47/189 (24%)
Query: 383 SMKFLIYGRTGWIGG-LLGKLCEKEGI------------------------PFEYGKGRL 417
M I G G +G L +L + + + L
Sbjct: 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADL 73
Query: 418 EDCSSLIADVQSVKPTHVFN-AAGVTGR----PNVDWCESHKTDTIRTNVAGTLTLADVC 472
+ +P +F+ AA V+G + + R N+ GT L D
Sbjct: 74 SA-PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGY---------RINLDGTRYLFDAI 123
Query: 473 RDHGILMMNYATGCIFEYDAA---HPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529
R Y +F A P I ++ + Y KA+ E LL +Y
Sbjct: 124 RIANG-KDGYKPRVVFTSSIAVFGAPLPYPI---PDEFHTTPLTSYGTQKAICELLLSDY 179
Query: 530 DNVCTLRVR 538
Sbjct: 180 SRRGFFDGI 188
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 2e-41
Identities = 51/317 (16%), Positives = 99/317 (31%), Gaps = 62/317 (19%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
NI+ITGA GF+ ++ L ++ I + + L++ +
Sbjct: 2 NIVITGAKGFVGKNLKADLTST-TDHHIFEVHRQTKEEELESAL---------------- 44
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
D I+H A N + EF+ N+ +L+ +
Sbjct: 45 -----------LKADFIVHLAGV----NRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPA 88
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
I +S+ NPY +K E L+ Y YG V R
Sbjct: 89 ILLSSSIQAT-----------------QDNPYGESKLQGEQLLREYAEEYGNTVYIYRWP 131
Query: 188 NVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV- 244
N++G P +I F R + ++ D + + Y +D+ + +
Sbjct: 132 NLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPTI 190
Query: 245 -GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWS 303
V V + + ++ + K + ++ ++N F Y L +
Sbjct: 191 ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDN-LFEKDLYSTY------LSYL 243
Query: 304 ERTIWEEGLRKTIEWYT 320
T + L ++
Sbjct: 244 PSTDFSYPLLMNVDDRG 260
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 35/157 (22%)
Query: 384 MKFLIYGRTGWIGG-LLGKLCEKEGIP-FEYGKG-RLEDCSSLIADVQSVKPTHVFNAAG 440
M +I G G++G L L FE + + E+ S + + + AG
Sbjct: 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKA-----DFIVHLAG 55
Query: 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGI 500
V RP H + NV+ + D+ + + S I
Sbjct: 56 VN-RP------EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLS-------------SSI 95
Query: 501 GYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRV 537
+D P Y ++K E+LL+EY V
Sbjct: 96 -QATQDNP------YGESKLQGEQLLREYAEEYGNTV 125
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 3e-40
Identities = 49/346 (14%), Positives = 98/346 (28%), Gaps = 56/346 (16%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+ GA G + H + + +V++ L L + ++
Sbjct: 16 YAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYL-------EPECRVAEML 66
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ L +D ++ A E + + T+ AC + R
Sbjct: 67 DHAGLERAL--RGLDGVIFSAGYYPSRPR--RWQEEVASALGQTNPFYAACLQAR-VPRI 121
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPT----NPYSATKAGAEMLVMAYGRSYGLPVIT 183
++V + + HE + Y K + R+ GLPV+
Sbjct: 122 LYVGSAYAMPRHPQGLPG--HEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVI 178
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
V G + I G + + G R+ + + L +G
Sbjct: 179 GIPGMVLGEL-DIGPTTGRVITAIGNGE-MTHYVAGQ--RNVIDAAEAGRGLLMALERGR 234
Query: 244 VGHVYNV------------------GTKKERRVID--------VAKDICKLFSMDPETSI 277
+G Y + G + + + + ++ P
Sbjct: 235 IGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDE 294
Query: 278 KFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQN 322
+E FLD +K LG+ T ++ L + I+W+ N
Sbjct: 295 TAIEVM---AGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDN 337
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 1e-07
Identities = 24/192 (12%), Positives = 47/192 (24%), Gaps = 50/192 (26%)
Query: 382 PSMKFLIYGRTGWIGG-LLGKLCEK-----------------EGIPFEYGKGRLEDCSSL 423
+K+ + G TG +G + + E + D + L
Sbjct: 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGL 71
Query: 424 IADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYA 483
++ + V +AG W + + + + T C +
Sbjct: 72 ERALRGL--DGVIFSAGYYPSRPRRW-----QEEVASALGQTNPFYAACLQARV------ 118
Query: 484 TGCIFE-------YDAAHPEGSGIGYKEEDTPNFTGSF---YSKTKAMVEELLKEYD--- 530
A G+ E + S Y K ++E +E
Sbjct: 119 -----PRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNG 173
Query: 531 -NVCTLRVRMPI 541
V M +
Sbjct: 174 LPVVIGIPGMVL 185
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 1e-38
Identities = 78/289 (26%), Positives = 121/289 (41%), Gaps = 48/289 (16%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS---NFKFVK 63
+ILI G AG+I SH +L+ +VV+D NL + KF
Sbjct: 2 NSILICGGAGYIGSHAVKKLVDE--GLSVVVVD---------NLQTGHEDAITEGAKFYN 50
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GD+ + + E+I+ +MHFAA + V S ++ NN+YG LLE
Sbjct: 51 GDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK- 109
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ +FI ST YGE D D + E + PTN Y TK E ++ Y ++ L
Sbjct: 110 VDKFIFSSTAATYGEVDVDLIT---EETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKI 166
Query: 184 TRGNNVYG----------PNQFPEK-LIPKFILLAMRGL--PLPIHG------DGSNVRS 224
R NV G PE LIP +L G + + G DG+ +R
Sbjct: 167 FRYFNVAGATPNGIIGEDHR--PETHLIP-LVLQVALGQREKIMMFGDDYNTPDGTCIRD 223
Query: 225 YLYCEDVAE----AFECILHKGEVGHVYNVGTKK---ERRVIDVAKDIC 266
Y++ ED+ + + + GE YN+G + ++D +++
Sbjct: 224 YIHVEDLVAAHFLGLKDLQNGGES-DFYNLGNGNGFSVKEIVDAVREVT 271
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 45.1 bits (108), Expect = 5e-05
Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 17/86 (19%)
Query: 459 RTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAA---HPEGSGIGYKEEDTPNFTGSFY 515
NV G L L +V + + IF AA + I E+T + Y
Sbjct: 92 NNNVYGALCLLEVMDEFKVDKF------IFSSTAATYGEVDVDLI---TEETMTNPTNTY 142
Query: 516 SKTKAMVEELLKEYD-----NVCTLR 536
+TK +E++L Y R
Sbjct: 143 GETKLAIEKMLHWYSQASNLRYKIFR 168
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-31
Identities = 65/341 (19%), Positives = 125/341 (36%), Gaps = 45/341 (13%)
Query: 7 KNILITGAAGFIASHVCNRLIR---------NYPEYKIVVLDKLDYCSNLKNLIPSKASS 57
K + +TG GF + L + + + + + S
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA----RVADGMQS---- 61
Query: 58 NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 117
GDI + + + + + H AAQ V S+ E N+ GT LLEA
Sbjct: 62 ----EIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEA 117
Query: 118 CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
+ G ++ +++++D+ Y +++ + G E + +PYS +K AE++ +Y S+
Sbjct: 118 IRHVGGVKAVVNITSDKCY--DNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 175
Query: 178 ---------GLPVITTRGNNVYGPNQF-PEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227
G V T R NV G + ++++P + + P+ I + +R + +
Sbjct: 176 FNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQH 234
Query: 228 CEDVAEAFECI-----LHKGEVGHVYNVGTKKE--RRVIDVAKDICKLFSMDPETSIKFV 280
+ + + E +N G V ++ + + K S +
Sbjct: 235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKY--WGEGASWQLD 292
Query: 281 ENRPFNDQRY-FLDDQK-LTSLGWSERTIWEEGLRKTIEWY 319
N ++ Y LD K LGW R L + W+
Sbjct: 293 GNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWH 333
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-29
Identities = 71/326 (21%), Positives = 117/326 (35%), Gaps = 71/326 (21%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLD-----------------KLDYCSNLKNL 50
+L+ G AG+I SH L+R+ + +V++D
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 51 IPSKASSNFKFVKGDIASADLVNFLLITES-IDTIMHFAAQTHVDNSFGNSFEFTKNNIY 109
P A GD+ + D +N + ID ++H A V S + ++ NN+
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 110 GTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH----EASQLLPTNPYSATKAG 165
G LL+A + + I S+ ++G +V N ++ P +PY +K
Sbjct: 123 GILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLI 181
Query: 166 AEMLVMAYGRSYGLPVITTRGNNVYG----------PNQFPEK-LIP------------- 201
AE ++ +YG+ I R N G LIP
Sbjct: 182 AERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQ--GSTHLIPIILGRVMSDIAPD 239
Query: 202 ---KFILLAMRGLPLPIHG------DGSNVRSYLYCEDVAE----AFECILHKGEVG--- 245
A +PI G DG+ VR Y++ D+A A + + G
Sbjct: 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSK 299
Query: 246 --HVYNVGTKKE---RRVIDVAKDIC 266
V+N+GT + R VI+VA+
Sbjct: 300 YFSVFNLGTSRGYSVREVIEVARKTT 325
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 13/79 (16%)
Query: 459 RTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAA---HPEGSGIGYKE----EDTPNFT 511
NV G L L H + IF AA +P + +
Sbjct: 118 DNNVVGILRLLQAMLLHKCDKI------IFSSSAAIFGNPTMGSVSTNAEPIDINAKKSP 171
Query: 512 GSFYSKTKAMVEELLKEYD 530
S Y ++K + E ++++
Sbjct: 172 ESPYGESKLIAERMIRDCA 190
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-29
Identities = 73/352 (20%), Positives = 129/352 (36%), Gaps = 45/352 (12%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
+LI G GFI +H+ RL+R Y++ LD + + +F FV+GD
Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDH-YEVYGLDI--GSDAISRFL---NHPHFHFVEGD 368
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I+ + + D ++ A N + + ++ C +
Sbjct: 369 ISIHSEWIEYHVKKC-DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--K 425
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP-------YSATKAGAEMLVMAYGRSYG 178
R I ST EVYG + E L P YS +K + ++ AYG G
Sbjct: 426 RIIFPSTSEVYGMCSDKYF---DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG 482
Query: 179 LPVITTRGNNVYGPNQ----FPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230
L R N GP + I + IL + G P+ + G R + D
Sbjct: 483 LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 542
Query: 231 VAEA-FECILHKGEV--GHVYNVGT-KKERRVIDVAKDICKLFSMDPE-------TSIKF 279
EA + I + G G + N+G + E + ++ + + F P +
Sbjct: 543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRV 602
Query: 280 VENRPFNDQRYFLDDQKLTS-------LGWSERTIWEEGLRKTIEWYTQNPD 324
VE+ + + Y + + S L W + +E + +T++++ + D
Sbjct: 603 VESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 81/360 (22%), Positives = 132/360 (36%), Gaps = 60/360 (16%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS-------- 57
+ +L+TG AG+I SH L+ Y VV+D N S S
Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNF---HNAFRGGGSLPESLRRVQELT 56
Query: 58 --NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
+ +F + DI + L S ++HFA V S ++ + N+ GT LL
Sbjct: 57 GRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLL 116
Query: 116 EACKVTGQIRRFIHVSTDEVYGETD-----EDAVVGNHEASQLLPTNPYSATKAGAEMLV 170
E K G ++ + S+ VYG E G TNPY +K E ++
Sbjct: 117 EIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGG-------CTNPYGKSKFFIEEMI 168
Query: 171 MAYGRSY-GLPVITTRGNNVYG----------PNQFPEKLIPKFIL-LAMRGLP-LPIHG 217
++ + R N G P P L+P ++ +A+ L + G
Sbjct: 169 RDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMP-YVSQVAIGRREALNVFG 227
Query: 218 ------DGSNVRSYLYCEDVAE----AFECILHKGEVGHVYNVGTKKERRVIDVAKDICK 267
DG+ VR Y++ D+A+ A + + +YN+GT V+ + + + K
Sbjct: 228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGC-RIYNLGTGTGYSVLQMVQAMEK 286
Query: 268 LFSMD-PETSIKFVENRPFNDQRYFLDDQK-LTSLGWS-ERTIWEEGLRKTIEWYTQNPD 324
P K V R + + + LGW+ + + W QNP
Sbjct: 287 ASGKKIP---YKVVARREGDVAACYANPSLAQEELGWTAALGL-DRMCEDLWRWQKQNPS 342
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-27
Identities = 87/356 (24%), Positives = 138/356 (38%), Gaps = 57/356 (16%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS------- 57
T IL+TG AG+I SH L+ + Y +V+ D NL N SK +
Sbjct: 4 TKGTILVTGGAGYIGSHTAVELLAH--GYDVVIAD------NLVN---SKREAIARIEKI 52
Query: 58 ---NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVL 114
F + D++ + + I +HFAA V S E+ +NN+ L
Sbjct: 53 TGKTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSL 112
Query: 115 LEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 174
L + ++R + S+ VYG + + E L TNPY TK AE ++
Sbjct: 113 LRVMRERA-VKRIVFSSSATVYGVPERSPID---ETFPLSATNPYGQTKLMAEQILRDVE 168
Query: 175 RSY-GLPVITTRGNNVYG----------PNQFPEKLIPKFIL-LAMRGLP-LPIHG---- 217
+ V T R N G P P L+P ++ +A+ L L + G
Sbjct: 169 AADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMP-YVAQVAVGKLEKLRVFGSDYP 227
Query: 218 --DGSNVRSYLYCEDVAE----AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM 271
DG+ VR Y++ D+A A + + + N+GT + V++V + K
Sbjct: 228 TPDGTGVRDYIHVVDLARGHIAALDALERRDAS-LTVNLGTGRGYSVLEVVRAFEKASGR 286
Query: 272 D-PETSIKFVENRPFNDQRYFLDDQK-LTSLGWS-ERTIWEEGLRKTIEWYTQNPD 324
P + V RP + + + ++GW ER + E W NP
Sbjct: 287 AVP---YELVARRPGDVAECYANPAAAAETIGWKAERDL-ERMCADHWRWQENNPR 338
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 2e-27
Identities = 97/358 (27%), Positives = 153/358 (42%), Gaps = 66/358 (18%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS---------- 57
+L+TG +G+I SH C +L++N + +++LD NL N SK S
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILD------NLCN---SKRSVLPVIERLGGK 50
Query: 58 NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 117
+ FV+GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A
Sbjct: 51 HPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISA 110
Query: 118 CKVTGQIRRFIHVSTDEVYGETD-----EDAVVGNHEASQLLPTNPYSATKAGAEMLVMA 172
+ ++ FI S+ VYG+ E G P +PY +K E ++
Sbjct: 111 MRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGT-------PQSPYGKSKLMVEQILTD 162
Query: 173 YGRSY-GLPVITTRGNNVYG----------PNQFPEKLIPKFIL-LAMRGLP-LPIHG-- 217
++ + R N G P P L+P +I +A+ L I G
Sbjct: 163 LQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGND 221
Query: 218 ----DGSNVRSYLYCEDVAE----AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLF 269
DG+ VR Y++ D+A+ A E + +K V H+YN+G V+DV K
Sbjct: 222 YPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGV-HIYNLGAGVGNSVLDVVNAFSKAC 280
Query: 270 SMD-PETSIKFVENRPFNDQRYFLDDQK-LTSLGWS-ERTIWEEGLRKTIEWYTQNPD 324
F R + Y+ D K L W RT+ +E + T W +++P
Sbjct: 281 GKPVN---YHFAPRREGDLPAYWADASKADRELNWRVTRTL-DEMAQDTWHWQSRHPQ 334
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 8e-24
Identities = 94/361 (26%), Positives = 141/361 (39%), Gaps = 58/361 (16%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASS------- 57
T K +L+TG AG+I SH LI N Y VV D NL N S S
Sbjct: 10 TSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVAD------NLSN---STYDSVARLEVL 58
Query: 58 ---NFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVL 114
+ F + D+ + + ID+++HFA V S + NNI GT VL
Sbjct: 59 TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVL 118
Query: 115 LEACKVTGQIRRFIHVSTDEVYGETDED-AVVGNHEASQLLPTNPYSATKAGAEMLVMAY 173
LE + + +F+ S+ VYG+ ++ E L PTNPY TK E ++
Sbjct: 119 LELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDL 177
Query: 174 GRSY--GLPVITTRGNNVYG----------PNQFPEKLIPKFIL-LAMRGLP-LPIHG-- 217
S R N G P P L+P ++ +A+ L I G
Sbjct: 178 YNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLP-YMAQVAVGRREKLYIFGDD 236
Query: 218 ----DGSNVRSYLYCEDVAE----AFECILHKGEVG---HVYNVGTKKERRVIDVAKDIC 266
DG+ +R Y++ D+A+ A + + E +N+G+ K V +V C
Sbjct: 237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFC 296
Query: 267 KLFSMD-PETSIKFVENRPFNDQRYFLDDQK-LTSLGWS-ERTIWEEGLRKTIEWYTQNP 323
K +D P K R + + L W E + E+ + +W T+NP
Sbjct: 297 KASGIDLP---YKVTGRRAGDVLNLTAKPDRAKRELKWQTELQV-EDSCKDLWKWTTENP 352
Query: 324 D 324
Sbjct: 353 F 353
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 1e-22
Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 43/332 (12%)
Query: 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+ LITG AGF+ ++ N L ++ + N + +
Sbjct: 10 HGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRN----------NEAKLPNVEMIS 57
Query: 64 GDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
DI D + I D I H AA++ V +S+ N N++GT +L+A + +
Sbjct: 58 LDIM--DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDS 115
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
R + + + E YG + + E +QL P +PY +KA ML Y ++YG+ +
Sbjct: 116 NLDCRILTIGSSEEYGMILPEESPVS-EENQLRPMSPYGVSKASVGMLARQYVKAYGMDI 174
Query: 182 ITTRGNNVYGPNQFPEKLIPKF------ILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
I TR N GP Q + F I + + + + G+ VR + D+ +A+
Sbjct: 175 IHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKV-GNLEAVRDFTDVRDIVQAY 233
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYF---- 291
+ G+ G VYNV + R+ DV + + ++ +T + +
Sbjct: 234 WLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTEL---------NPLQLRPSE 284
Query: 292 ---L--DDQKL-TSLGWSERTIWEEGLRKTIE 317
L +++L S GW R E+ L + ++
Sbjct: 285 VPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQ 316
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 92.5 bits (229), Expect = 2e-20
Identities = 51/367 (13%), Positives = 94/367 (25%), Gaps = 65/367 (17%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPE---YKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
LI G G I + + L +K+ + + + + +V+
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR-------RTRPAWHEDNPINYVQ 54
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
DI+ D L + + H T + S E + N +L+A
Sbjct: 55 CDISDPDDSQAKL--SPLTDVTHVFYVTWANRS--TEQENCEANSKMFRNVLDAVIPNCP 110
Query: 124 -IRRFIHVSTDEVYGETDEDAVVGNHEASQL---LPTNPYSATKAGAEMLVMA-YGRSYG 178
++ + + Y E LP Y E +++ + G
Sbjct: 111 NLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEG 170
Query: 179 LPVITTRGNNVYGPNQ-----FPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV-- 231
L R N++G + L + G L G + Y C D
Sbjct: 171 LTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL 230
Query: 232 -AEAFE-CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDP---------------- 273
AE + +NV + K + + F ++
Sbjct: 231 IAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMK 290
Query: 274 ----------------ETSIKFVENRPFND-----QRYFLDDQKLTSLGWSERTIWEEGL 312
T +K V F D + + K G+ +
Sbjct: 291 GKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAF 350
Query: 313 RKTIEWY 319
I+
Sbjct: 351 ISWIDKA 357
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 3e-20
Identities = 44/219 (20%), Positives = 82/219 (37%), Gaps = 33/219 (15%)
Query: 2 ATYTPKNILITGAAGFIASHVCNRLIRNYP-EYKIVVL----------DKL-----DYCS 45
+ + +L+TGA GF+ ++ L+R + +++ L +L
Sbjct: 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDP 128
Query: 46 NLKNLIPSKASSNFKFVKGDIASADL----VNFLLITESIDTIMHFAAQTHVDNSFGNSF 101
L A+ + V GD + DL + + E++D I+ AA + + F
Sbjct: 129 ELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELF 187
Query: 102 EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPT----- 156
N+ GT L+ T +++ F +VST +V + A + + + PT
Sbjct: 188 G---PNVAGTAELIRIAL-TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDG 243
Query: 157 ---NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGP 192
Y +K E+L+ LPV R +
Sbjct: 244 GWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 1e-18
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 155 PTN-PYSATK-AGAEMLVMAYGRSYGLPVITTRGNNVYGPN-QFPEK-------LIPKFI 204
PTN PY+ K AG ++ +Y R YG + N+YGP+ F L+ +F
Sbjct: 131 PTNEPYAIAKIAGIKL-CESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFH 189
Query: 205 LLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV---------YNVGTKK 254
+ P + + G G+ +R +L+ +D+A A ++ + NVGT
Sbjct: 190 EATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV 249
Query: 255 ERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRK 314
+ + ++A+ I K+ + + + F ++P R LD +L LGW E GL
Sbjct: 250 DCTIRELAQTIAKV--VGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLAS 307
Query: 315 TIEWYTQNPD 324
T +W+ +N D
Sbjct: 308 TYQWFLENQD 317
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 1e-18
Identities = 41/251 (16%), Positives = 81/251 (32%), Gaps = 41/251 (16%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSKASSNFKFV 62
K I++ GA+GF+ S + N + +++ + +K+ + + K
Sbjct: 5 KKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIK-----------IENEHLKVK 51
Query: 63 KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
K D++S D V + A N N+ + I +++ K G
Sbjct: 52 KADVSSLDEV--------CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG 103
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+ RF+ V ++ + E P N KA E + + + +
Sbjct: 104 -VNRFLMVGGAGSLFIAPGLRLMDSGEV----PENILPGVKALGEFYLNFLMKEKEIDWV 158
Query: 183 TTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILHK 241
P + L + + I G S++ ED A A + + H
Sbjct: 159 FFSPAADMRPG-----VRTGRYRLGKDDMIVDIVG-----NSHISVEDYAAAMIDELEHP 208
Query: 242 GEVGHVYNVGT 252
+ +G
Sbjct: 209 KHHQERFTIGY 219
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 21/163 (12%), Positives = 41/163 (25%), Gaps = 35/163 (21%)
Query: 384 MKFLIYGRTGWIGGLLGKL-----------------CEKEGIPFEYGKGRLEDCSSLIAD 426
K ++ G +G++G L + E + K + +
Sbjct: 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEV 64
Query: 427 VQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGC 486
+ V +A D + LT+ D + G+ G
Sbjct: 65 CKGA--DAVISAFNPGWNN---------PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113
Query: 487 IFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529
+ G+ D+ + KA+ E L
Sbjct: 114 -----GSLFIAPGLRLM--DSGEVPENILPGVKALGEFYLNFL 149
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 40/322 (12%), Positives = 101/322 (31%), Gaps = 53/322 (16%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
ILI G G + + RL +++ L + + + + D+
Sbjct: 4 SKILIAGC-GDLGLELARRLTAQ--GHEVTGL-----RRS-----AQPMPAGVQTLIADV 50
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
D + ++ + +++ A + + + + + G L A + ++
Sbjct: 51 TRPDTLASIVHLRP-EILVYCVAASEYSDE-----HYRLSYVEGLRNTLSALEGAP-LQH 103
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
VS+ VYG+ E+ + E + + + AE L+ R
Sbjct: 104 VFFVSSTGVYGQEVEEWL---DEDTPPIAKDFSGKRMLEAEALLA------AYSSTILRF 154
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK---GE 243
+ +YGP + ++ P + + ++ +D A ++ +
Sbjct: 155 SGIYGPGRLR--------MIRQAQTPEQWPARNA-WTNRIHRDDGAAFIAYLIQQRSHAV 205
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIK--FVENRPFNDQRYFLDDQKLTSLG 301
+Y V + V D+ + + + N+ + L + +L + G
Sbjct: 206 PERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPVQGNK-----K--LSNARLLASG 258
Query: 302 WSER--TIWEEGLRKTIEWYTQ 321
+ + G + +
Sbjct: 259 YQLIYPD-YVSGYGALLAAMRE 279
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 4e-17
Identities = 53/223 (23%), Positives = 81/223 (36%), Gaps = 37/223 (16%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD----KLDYCSNLKNLIPSKAS 56
+ ILITG G +++ KI+V K +
Sbjct: 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS---EMAMEFNDP-- 70
Query: 57 SNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLE 116
+F GD+ + +N+ L E +D +H AA HV + N E K NI G ++
Sbjct: 71 -RMRFFIGDVRDLERLNYAL--EGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVIN 127
Query: 117 ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
AC I + I +STD+ A P N Y ATK ++ L ++
Sbjct: 128 ACLKNA-ISQVIALSTDK--------AA---------NPINLYGATKLCSDKLFVSANNF 169
Query: 177 YGLPVIT---TRGNNVYGPNQFPEKLIPKFI-LLAMRGLPLPI 215
G R NV G ++P F L+ + +PI
Sbjct: 170 KGSSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPI 209
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 2e-16
Identities = 64/348 (18%), Positives = 115/348 (33%), Gaps = 62/348 (17%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLI-RNYPEYKIVV-----LDKLDYCSNLKNLIPSK 54
M + + + +TGA+GFI S + RL+ R Y V + +L +L K
Sbjct: 1 MGSQSET-VCVTGASGFIGSWLVMRLLERGY----TVRATVRDPTNVKKVKHLLDL--PK 53
Query: 55 ASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVL 114
A ++ K D+A +F + + H A ++ E K I G +
Sbjct: 54 AETHLTLWKADLADEG--SFDEAIKGCTGVFHVATPMDFESK-DPENEVIKPTIEGMLGI 110
Query: 115 LEACKVTGQIRRFIHVSTDE-VYGETDEDAVV-------GNHEASQLLPTNPYSATKAGA 166
+++C +RR + S+ V + + V ++ + Y +K A
Sbjct: 111 MKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLA 170
Query: 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----KLIPKFILLAMRGLPLPIHGDGSN 221
E Y + + IT V GP I + G +
Sbjct: 171 EQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVH 230
Query: 222 VRSYLYCEDVAEA----FEC-------ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS 270
+ D+ A FE I H + D+AK + + +
Sbjct: 231 LD------DLCNAHIYLFENPKAEGRYIC----SSHDCIIL--------DLAKMLREKY- 271
Query: 271 MDPETSI-KFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIE 317
PE +I + N + +KLT LG+ + E+ ++
Sbjct: 272 --PEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVD 317
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 74.9 bits (184), Expect = 4e-15
Identities = 51/283 (18%), Positives = 85/283 (30%), Gaps = 55/283 (19%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKAS---SNFKF 61
+L+TGA+G V +L ++ L +++
Sbjct: 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL--------VRS--AQGKEKIGGEADV 52
Query: 62 VKGDIASADLVNFLLITESIDTIMH-------------FAAQTHVDNSFGNSFEFTKNNI 108
GDI AD +N + ID ++ + F + + +
Sbjct: 53 FIGDITDADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDW 110
Query: 109 YGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEM 168
G ++A KV G ++ + V G T+ D L K AE
Sbjct: 111 IGQKNQIDAAKVAG-VKHIVVVG---SMGGTNPD------HPLNKLGNGNILVWKRKAEQ 160
Query: 169 LVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228
+ G P R +K LL + L + R
Sbjct: 161 YL----ADSGTPYTIIR------AGGLLDKEGGVRELLVGKDDELLQTDTKTVPR----- 205
Query: 229 EDVAEAF-ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS 270
DVAE + +L + +++G+K E KD LFS
Sbjct: 206 ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPT-KDFKALFS 247
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 73.9 bits (181), Expect = 5e-15
Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 44/254 (17%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSKASSNFKFVK 63
I I GA G S + +++ + K+ ++ + ++
Sbjct: 2 KIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKI-----------TQTHKDINILQ 48
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
DI T+ + Q V +++G S + + ++ L+ T
Sbjct: 49 KDIFDL-------------TLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV- 94
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
R + V ++ + E+ L Y +A A+ L
Sbjct: 95 SPRLLVVGGAASLQIDEDGNTL--LESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTY 152
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILHKG 242
+ ++ P + + L DG S++ ED A A + I
Sbjct: 153 ISPSAMFEPG-------ERTGDYQIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPN 202
Query: 243 EVGHVYNVGTKKER 256
+ + V K E
Sbjct: 203 HLNEHFTVAGKLEH 216
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 8e-15
Identities = 54/288 (18%), Positives = 102/288 (35%), Gaps = 53/288 (18%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR---------LEDCSSLIADVQSVKPTH 434
M+ LI G +G +G L +L + + L D L + +P
Sbjct: 1 MRTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDV 60
Query: 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAH 494
+ NAA +T +VD CE K + N + + +++ +T +F
Sbjct: 61 IINAAAMT---DVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVF------ 111
Query: 495 PEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITK 554
+G YKEED PN ++Y +K + E + D+ +R + ++ K
Sbjct: 112 -DGEKGNYKEEDIPNPI-NYYGLSKLLGETFALQ-DDSLIIRTSGIFRN--KGFPIYVYK 166
Query: 555 ISRYNKVVNI------PNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSH---NEILE 605
+ K V P +L +E+ + GI + + +I E
Sbjct: 167 TLKEGKTVFAFKGYYSP---ISARKLASAILELLELRKTGIIHVAGERISRFELALKIKE 223
Query: 606 MYK-----KYINPEFKWVNFTLEEQAKVIVAPR-SNNEMDASKLKKEF 647
+ K ++ W +A R ++ +D+S+ +K
Sbjct: 224 KFNLPGEVKEVDEVRGW------------IAKRPYDSSLDSSRARKIL 259
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 3e-11
Identities = 49/258 (18%), Positives = 80/258 (31%), Gaps = 60/258 (23%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
LITGA+G + + L ++++ + L D+
Sbjct: 2 RTLITGASGQLGIELSRLL---SERHEVIKVYNSSEIQGGYKL--------------DLT 44
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ +I + D I++ AA T VD + K N ++ A KV
Sbjct: 45 DFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS--YI 102
Query: 128 IHVSTDEV-------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRSY 177
+H+STD V Y E D NP Y +K E + S
Sbjct: 103 VHISTDYVFDGEKGNYKEED--------------IPNPINYYGLSKLLGETFALQD-DSL 147
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
+I T G ++ F P ++ G + S + +A A
Sbjct: 148 ---IIRTSG--IFRNKGF-----PIYVYKTLKEGKTVFAFKG---YYSPISARKLASAIL 194
Query: 237 CILHKGEVG--HVYNVGT 252
+L + G HV
Sbjct: 195 ELLELRKTGIIHVAGERI 212
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 3e-14
Identities = 74/366 (20%), Positives = 123/366 (33%), Gaps = 87/366 (23%)
Query: 1 MATYTP---KNILITGAAGFIASHVCNRLI-RNYPEYKIVV-----LDKLDYCSNLKNLI 51
MAT P K + G GF+AS + L+ + Y V D S+L L
Sbjct: 1 MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGY----AVNTTVRDPDNQKKVSHLLEL- 55
Query: 52 PSKASSNFKFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGT 111
+ + K + D+ +F D + H A H + + K I G
Sbjct: 56 --QELGDLKIFRADLTDEL--SFEAPIAGCDFVFHVATPVHFASE-DPENDMIKPAIQGV 110
Query: 112 HVLLEACKVTGQIRRFIHVS------------TDEVYGE---TDEDAVVGNHEASQLLPT 156
+++AC ++R I S T V E TD + S PT
Sbjct: 111 VNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE-----FLTSAKPPT 165
Query: 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----KLIPKFI---LLAM 208
Y A+K AE + + +IT + G + + L I +
Sbjct: 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLI 225
Query: 209 RGLPLPIHGDGS----NVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKE---RRVI-- 259
G+ GS +V DV A H++ V K+ R +
Sbjct: 226 NGMKGMQMLSGSVSIAHVE------DVCRA-----------HIF-VAEKESASGRYICCA 267
Query: 260 ------DVAKDICKLFSMDPETSI--KFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEG 311
++AK + K + P+ + F + P + + +KL G+S + EE
Sbjct: 268 ANTSVPELAKFLSKRY---PQYKVPTDFGDFPP--KSKLIISSEKLVKEGFSFKYGIEEI 322
Query: 312 LRKTIE 317
+++E
Sbjct: 323 YDESVE 328
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 4e-14
Identities = 61/316 (19%), Positives = 101/316 (31%), Gaps = 67/316 (21%)
Query: 380 RKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE----DCSSLIADVQSVKPTHV 435
MK LI G G +G + K + + + + + ++ KP V
Sbjct: 9 HHHHMKILITGANGQLGREIQKQLKGKNVEV-IPTDVQDLDITNVLAVNKFFNEKKPNVV 67
Query: 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHP 495
N A T VD CE + N G LA G ++ +T +F+ +A P
Sbjct: 68 INCAAHT---AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP 124
Query: 496 EGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPISSDLNNPRNFITK 554
E D N S Y KTK E +K +R + + NF+
Sbjct: 125 ------ITEFDEVNPQ-SAYGKTKLEGENFVKALNPKYYIVR----TAWLYGDGNNFVKT 173
Query: 555 ISRYNK------VVN----IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEIL 604
+ K VV+ P S L ++ +++ G ++ T G+ S
Sbjct: 174 MINLGKTHDELKVVHDQVGTPTSTVDLARVV---LKVIDEKNYGTFHCTCKGICS----- 225
Query: 605 EMYKKYINPEFKWVNFTLE--EQAKVIV-------------APR-SNNEMDASKLKKEF- 647
W +F +E + V A R + + L+
Sbjct: 226 ------------WYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTG 273
Query: 648 PELLSIKDSLIKYVFE 663
K+SL +Y+
Sbjct: 274 DITREWKESLKEYIDL 289
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 4e-09
Identities = 40/181 (22%), Positives = 54/181 (29%), Gaps = 50/181 (27%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITGA G + + +L +++ D D DI
Sbjct: 14 KILITGANGQLGREIQKQL--KGKNVEVIPTDVQDL---------------------DIT 50
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ VN + + +++ AA T VD K N G L A G
Sbjct: 51 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA--EI 108
Query: 128 IHVSTDEV--------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRS 176
+ +STD V E D NP Y TK E V A
Sbjct: 109 VQISTDYVFDGEAKEPITEFD--------------EVNPQSAYGKTKLEGENFVKALNPK 154
Query: 177 Y 177
Y
Sbjct: 155 Y 155
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 8e-14
Identities = 65/351 (18%), Positives = 114/351 (32%), Gaps = 78/351 (22%)
Query: 7 KNILITGAAGFIASHVCNRLI-RNYPEYKIVV------LDKLDYCSNLKNLIPSKASSNF 59
+ +TG GF+ S + L+ Y V ++ S L NL AS
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLENGY----SVNTTIRADPERKRDVSFLTNL--PGASEKL 55
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
F D+++ D +F E I H A+ S TK + G +L+AC
Sbjct: 56 HFFNADLSNPD--SFAAAIEGCVGIFHTASPIDFAVS-EPEEIVTKRTVDGALGILKACV 112
Query: 120 VTGQIRRFIHVST----------DEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGA 166
+ ++RFI+ S+ +V E +D D S Y+ +K A
Sbjct: 113 NSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVD-----LLRSVKPFGWNYAVSKTLA 167
Query: 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----KLIPKFILLAMRGLPLPIHG--DG 219
E V+ +G G+ V+T + G P+ + +L + +
Sbjct: 168 EKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVH- 226
Query: 220 SNVRSYLYCEDVAEA----FEC-------ILHKGEVGHVYNVGTKKERRVIDVAKDICKL 268
V DVA A E + + ++++ +
Sbjct: 227 --VD------DVARAHIYLLENSVPGGRYNC----SPFIVPIE--------EMSQLLSAK 266
Query: 269 FSMDPETSI--KFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIE 317
+ PE I + L+ +KL G+ + E+ I+
Sbjct: 267 Y---PEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQ 314
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 2e-13
Identities = 56/316 (17%), Positives = 103/316 (32%), Gaps = 72/316 (22%)
Query: 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE----DCSSLIADVQSVKPTHVFNA 438
+ +I G G +G L + E Y + + S + VQ ++P + +
Sbjct: 5 KERVIITGANGQLGKQLQEELNPEEYDI-YPFDKKLLDITNISQVQQVVQEIRPHIIIHC 63
Query: 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGS 498
A T VD E + N G +A + G ++ +T +F+ D
Sbjct: 64 AAYT---KVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEG--- 117
Query: 499 GIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPIS---SDLNNPRNFITK 554
Y E P + Y +K E+ +KE + +R S N NF+
Sbjct: 118 ---YDEFHNPAPI-NIYGASKYAGEQFVKELHNKYFIVR----TSWLYGKYGN--NFVKT 167
Query: 555 ISRYNK------VVN----IPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEIL 604
+ R K VV P + L+ ++ ++ +L G ++ +N G S
Sbjct: 168 MIRLGKEREEISVVADQIGSPTYVADLNVMI---NKLIHTSLYGTYHVSNTGSCS----- 219
Query: 605 EMYKKYINPEFKWVNFTLE--EQAKVIV-------------APR-SNNEMDASKLKKEFP 648
W F + A + V A R + + L+
Sbjct: 220 ------------WFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGF 267
Query: 649 ELLSI-KDSLIKYVFE 663
+ ++ L ++ E
Sbjct: 268 LQMPSWEEGLERFFIE 283
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 4e-09
Identities = 39/182 (21%), Positives = 57/182 (31%), Gaps = 50/182 (27%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ ++ITGA G + + L N EY I DK DI
Sbjct: 6 ERVIITGANGQLGKQLQEEL--NPEEYDIYPFDKKL---------------------LDI 42
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ V ++ I+H AA T VD + N G + A ++ G +
Sbjct: 43 TNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA--K 100
Query: 127 FIHVSTDEV--------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGR 175
+++STD V Y E P Y A+K E V
Sbjct: 101 LVYISTDYVFQGDRPEGYDEFH--------------NPAPINIYGASKYAGEQFVKELHN 146
Query: 176 SY 177
Y
Sbjct: 147 KY 148
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 5e-13
Identities = 55/320 (17%), Positives = 119/320 (37%), Gaps = 65/320 (20%)
Query: 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR-----------LEDCSSLIADVQSVK 431
+ + L+ G TG +G + K ++ G G L D +++ + +
Sbjct: 2 NRRVLVTGATGLLGRAVHKEFQQNNWHA-VGCGFRRARPKFEQVNLLDSNAVHHIIHDFQ 60
Query: 432 PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYD 491
P + + A D E+ + NV + LA G ++ ++ +F
Sbjct: 61 PHVIVHCAAER---RPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVF--- 114
Query: 492 AAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY-DNVCTLRVRMPI--SSDLNNP 548
+G+ Y+EED P + Y KTK E+ + E LR+ PI
Sbjct: 115 ----DGTNPPYREEDIPAPL-NLYGKTKLDGEKAVLENNLGAAVLRI--PILYGEVEKLE 167
Query: 549 RNFIT----KISRYNKVVNI-------PNSMTVLDELLPISIEMAKR-----NLRGIWNF 592
+ +T K+ NK N+ P T + ++ + ++A++ +++G +++
Sbjct: 168 ESAVTVMFDKVQFSNKSANMDHWQQRFP---THVKDVATVCRQLAEKRMLDPSIKGTFHW 224
Query: 593 TNPGVVS-H---NEILEMYK---KYINPEFKWVNFTLEEQAKVIVAPR-SNNEMDASKLK 644
+ ++ + I + + ++ P T A R N ++D SKL+
Sbjct: 225 SGNEQMTKYEMACAIADAFNLPSSHLRPI------TDSPVLG---AQRPRNAQLDCSKLE 275
Query: 645 KEF-PELLSIKDSLIKYVFE 663
+ + + + ++
Sbjct: 276 TLGIGQRTPFRIGIKESLWP 295
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 1e-12
Identities = 61/350 (17%), Positives = 111/350 (31%), Gaps = 81/350 (23%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ +L+TGA G + V +N + V + + ++
Sbjct: 3 RRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRARPKFEQV--------------NL 46
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
++ V+ ++ I+H AA+ D ++ N+ + L + G
Sbjct: 47 LDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG--AF 104
Query: 127 FIHVSTDEV-------YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--- 176
I++S+D V Y E D A P N Y TK E V+
Sbjct: 105 LIYISSDYVFDGTNPPYREEDIPA-----------PLNLYGKTKLDGEKAVLENNLGAAV 153
Query: 177 ------YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230
YG + + + K + + R + +D
Sbjct: 154 LRIPILYG--EVEKLEES------AVTVMFDK--VQFSNK-SANMDHWQ--QRFPTHVKD 200
Query: 231 VAEAFECILHKGEVG-------HVYNVG--TKKERRVIDVAKDICKLFSMDPE----TSI 277
VA + K + H TK ++A I F++ +
Sbjct: 201 VATVCRQLAEKRMLDPSIKGTFHWSGNEQMTK-----YEMACAIADAFNLPSSHLRPITD 255
Query: 278 KFVE--NRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNPDW 325
V RP N Q LD KL +LG +RT + G+++++ + + W
Sbjct: 256 SPVLGAQRPRNAQ---LDCSKLETLGIGQRTPFRIGIKESLWPFLIDKRW 302
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.5 bits (169), Expect = 3e-12
Identities = 70/489 (14%), Positives = 148/489 (30%), Gaps = 156/489 (31%)
Query: 226 LYCEDVAEAFECILHKGEVGHVYNVGTKKER--RVIDV----AKDICKLF---SMDPE-- 274
C+DV + + IL K E+ H+ R+ +++ + F +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK 92
Query: 275 ---TSIKFVENRP------FNDQRYFL--DDQKLTSLG-WSERTIWEEGLRKTIEWYTQN 322
+ IK + +P + +QR L D+Q + + LR+
Sbjct: 93 FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK--LRQ-------- 142
Query: 323 PDWWGDVSGALL---PHPRMLM--MPG-GRHFDGSEENK---AVSSVSTNNIQSRMVVPV 373
ALL P +L+ + G G K A+ + +Q +M +
Sbjct: 143 ---------ALLELRPAKNVLIDGVLGSG---------KTWVALDVCLSYKVQCKMDFKI 184
Query: 374 -----SKCSSPRKPSMKFL--IYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED------- 419
C+SP ++ L + + + + L
Sbjct: 185 FWLNLKNCNSPET-VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 420 CSSLI--ADVQSVKPTHVFNAAG----VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCR 473
+ L+ +VQ+ K + FN +T R T+ T +
Sbjct: 244 ENCLLVLLNVQNAKAWNAFN-LSCKILLTTR-----------FKQVTDFLSAATTTHISL 291
Query: 474 DHGILMMNYATGCIFEYDAAHPEGSGI-----GYKEEDTPNFTGSFYSKTKAMVEELLKE 528
DH + + E + + +D P + + +++ E +++
Sbjct: 292 DHHSMTLT------------PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339
Query: 529 -------YDNVCTLRVRMPISSDLNN--P---RNFITKISRYNKVVNIPNSMTVL----- 571
+ +V ++ I S LN P R ++S + +IP +L
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP--TILLSLIWF 397
Query: 572 ----DELLPISIEMAKRNLRGIWNFTNPGVVS------------------HNEILEMY-- 607
+++ + ++ K +L +S H I++ Y
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQP--KESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 608 -KKYINPEF 615
K + + +
Sbjct: 456 PKTFDSDDL 464
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 1e-07
Identities = 86/652 (13%), Positives = 177/652 (27%), Gaps = 199/652 (30%)
Query: 92 HVDNSFGNSFEFTKNNIYGTHVLLEA------CKVTGQIRRFIHVST--DEVYGETDEDA 143
H+D G ++ +I V +A CK + + I D + D
Sbjct: 6 HMDFETG-EHQYQYKDI--LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV- 61
Query: 144 VVGNHEASQLL-------PTNPY-----SATKAGAEMLVMAYGRSYGLPVITTRG----- 186
+ L + + L+ P + TR
Sbjct: 62 -----SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 187 NNVYGPNQ-FPEKLIP--------KFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEA-- 234
+ +Y NQ F + + + LL +R + I G + ++++ +
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV----ALDVCL 172
Query: 235 ---FECILHKGEVGHVY--NVGT-KKERRVIDVAKDICKLFSMDPETSIKFVENRPFN-- 286
+C + ++ N+ V+++ + + + + N
Sbjct: 173 SYKVQCKMD----FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 287 -----DQRYFLDDQKLTSLG-----WSERTIWEE-GLR-KTIEWYTQNPDWWGDVSGALL 334
+R L + + W L K + T+ +S A
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAK-AWNAFNLSCKIL-LTTRFKQVTDFLSAATT 286
Query: 335 PHPRMLMMPGGRHFDGSEENKAVSSVSTNNIQSRMVVPVSKCS-SPRKPSM--KFLIYGR 391
H + E + Q +P + +PR+ S+ + + G
Sbjct: 287 THISLDHHSMT--LTPDEVKSLLLKYLDCRPQD---LPREVLTTNPRRLSIIAESIRDGL 341
Query: 392 TGWIGGLLGKLCEK--EGI--------PFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGV 441
W C+K I P EY + + S PT + +
Sbjct: 342 ATW-DNWKHVNCDKLTTIIESSLNVLEPAEY-RKMFDRLSVFPPSAHI--PTILLS---- 393
Query: 442 TGRPNVDWCESHKTDTI-------------RTNVAGTLTLADVCRD-----------HGI 477
+ W + K+D + + T+++ + + H
Sbjct: 394 -----LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448
Query: 478 LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK-----TKAMVEELLKEYDNV 532
++ +Y F+ D P P FYS E + + V
Sbjct: 449 IVDHYNIPKTFDSDDLIP------------PYLDQYFYSHIGHHLKNIEHPERMTLFRMV 496
Query: 533 CTLRVRMPISSDLNNPRNFI-TKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWN 591
D F+ KI + N S +L+ L
Sbjct: 497 FL---------DFR----FLEQKIRHDSTAWNASGS--ILNTLQQ--------------- 526
Query: 592 FTNPGVVSHNEILEMYKKYI---NPEFK-----WVNFTLEEQAKVIVAPRSN 635
L+ YK YI +P+++ ++F + + +I + ++
Sbjct: 527 ------------LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 5e-12
Identities = 58/360 (16%), Positives = 98/360 (27%), Gaps = 86/360 (23%)
Query: 9 ILITGAAGFIASHVCNRLI-RNYPEYKIVV-----LDKLDYCSNLKNLIPSKASSNFKFV 62
+L+TGA GF+ASHV +L+ Y V KL L+ +K F+
Sbjct: 14 VLVTGANGFVASHVVEQLLEHGY----KVRGTARSASKLAN---LQKRWDAKYPGRFETA 66
Query: 63 -KGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
D+ + + + + H A+ N E I GT L A T
Sbjct: 67 VVEDMLKQG--AYDEVIKGAAGVAHIASVVSFSN---KYDEVVTPAIGGTLNALRAAAAT 121
Query: 122 GQIRRFIHVS------------TDEVYGETD-----EDAVVGNHEASQLLPTNPYSATKA 164
++RF+ S E D E+ Y+A+K
Sbjct: 122 PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKT 181
Query: 165 GAEMLVMAY----GRSYGLPVITTRGNN---VYGPNQFPEKLIP---KFILLAMRGLP-- 212
AE+ + + L + G PE +++ G
Sbjct: 182 EAELAAWKFMDENKPHFTLNAV-----LPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSP 236
Query: 213 -LPIHGDGS--NVRSYLYCEDVAE----AFECILHKGE----VGHVYNVGTKKERRVIDV 261
L + + D+ + ++ V
Sbjct: 237 ALALMPPQYYVSAV------DIGLLHLGCLVLPQIERRRVYGTAGTFDWN--------TV 282
Query: 262 AKDICKLFSMDPETSIKFVENRPFNDQRYFLDD----QKLTSLGWSERTIWEEGLRKTIE 317
KL+ P + + D + L SLG EE ++ +
Sbjct: 283 LATFRKLY---PSKTFP-ADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 1e-09
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 16/151 (10%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE------DCSSLIADVQSVKPTHVFN 437
M L++G+TG +G L + G E + + V+ ++P + N
Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60
Query: 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEG 497
AA T VD ES N +A + G +++Y+T +F P
Sbjct: 61 AAAHT---AVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP-- 115
Query: 498 SGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528
++E D + Y KTK E+ L++
Sbjct: 116 ----WQETDATSPLN-VYGKTKLAGEKALQD 141
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-08
Identities = 35/181 (19%), Positives = 55/181 (30%), Gaps = 47/181 (25%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
NIL+ G G + + L + + ++C GD +
Sbjct: 2 NILLFGKTGQVGWELQRSL-APVGNLIALDVHSKEFC-------------------GDFS 41
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ V + D I++ AA T VD + N + +A TG
Sbjct: 42 NPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWV 99
Query: 128 IHVSTDEV--------YGETDEDAVVGNHEASQLLPTNP---YSATKAGAEMLVMAYGRS 176
+H STD V + ETD T+P Y TK E +
Sbjct: 100 VHYSTDYVFPGTGDIPWQETD--------------ATSPLNVYGKTKLAGEKALQDNCPK 145
Query: 177 Y 177
+
Sbjct: 146 H 146
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 9e-09
Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 40/179 (22%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSKASSNFK 60
K I I GA G + ++ Y++ VL +L PS+
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRL----------PSEGPRPAH 49
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIY--GTHVLLEAC 118
V GD+ A +D A Q V G + + + G ++ A
Sbjct: 50 VVVGDVLQAA---------DVDK--TVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAM 98
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
K G + + + ++ A + + ++ G Y
Sbjct: 99 KAHG-VDKVVACTS----------AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKY 146
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 1e-08
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 9/125 (7%)
Query: 58 NFKFVKGDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 114
+ ++ GD+A D + + + AAQ+ V S+ T + G L
Sbjct: 64 DIQYEDGDMA--DACSVQRAVIKAQPQEVYNLAAQSFVGASWNQP-VTTGVVDGLGVTHL 120
Query: 115 LEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 174
LEA + RF ST E++G E + P +PY K + + Y
Sbjct: 121 LEAIRQFSPETRFYQASTSEMFGLIQA---ERQDENTPFYPRSPYGVAKLYGHWITVNYR 177
Query: 175 RSYGL 179
S+GL
Sbjct: 178 ESFGL 182
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 52 PSKASSNFKFVKGDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKN-NI 108
P + F GD++ D N I + D + + A +HV SF + E+T + +
Sbjct: 50 PHTCNPKFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESP-EYTADVDA 106
Query: 109 YGTHVLLEACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166
GT LLEA + G + RF ST E+YG E + E + P +PY+ K A
Sbjct: 107 MGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE---IPQKETTPFYPRSPYAVAKLYA 163
Query: 167 EMLVMAYGRSYGL 179
+ + Y SYG+
Sbjct: 164 YWITVNYRESYGM 176
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 2e-08
Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 40/241 (16%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF 59
M + IL+ GA G+I HV + +P + +V S L+ S +S
Sbjct: 1 MGSR--SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA 58
Query: 60 KFVKGDIAS-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
V G I A LV + +++D ++ ++ +++A
Sbjct: 59 NIVHGSIDDHASLVEAV---KNVDVVISTVGSLQIE---------------SQVNIIKAI 100
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
K G ++RF +G D D V + P KA + A G Y
Sbjct: 101 KEVGTVKRFFPSE----FG-NDVDNV------HAVEPAKSVFEVKAKVRRAIEAEGIPY- 148
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
T +N + + + + + L A + I GDG+ ++ ED+
Sbjct: 149 ----TYVSSNCFA--GYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA 202
Query: 239 L 239
+
Sbjct: 203 V 203
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 2e-08
Identities = 40/260 (15%), Positives = 76/260 (29%), Gaps = 63/260 (24%)
Query: 5 TPKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKF 61
+L+ GA G +A ++ + L + + V ++ + +
Sbjct: 20 QGMRVLVVGANGKVARYLLSELKNKGHE----PVA-----------MVRNEEQGPELRER 64
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIY-----GTHVLLE 116
DI A+L E FA+ V + G+ + G ++
Sbjct: 65 GASDIVVANL------EEDFSH--AFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQ 116
Query: 117 ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
+ G I+RFI VS+ G D D + Y K A+ + +
Sbjct: 117 EAEKRG-IKRFIMVSS---VGTVDPDQG--------PMNMRHYLVAKRLADDEL----KR 160
Query: 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF- 235
L R P + + + S + + DVA+
Sbjct: 161 SSLDYTIVR---------------PGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIA 205
Query: 236 ECILHKGEVGHVYNVGTKKE 255
E + + +G + V
Sbjct: 206 ELVDQQHTIGKTFEVLNGDT 225
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 4e-08
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 58 NFKFVKGDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIYGTHVL 114
+ K + D+ + N + E + D + + AAQ+ V SF T + G +
Sbjct: 53 DVKIIHMDLL--EFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQP-ILTAEVDAIGVLRI 109
Query: 115 LEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYG 174
LEA + +F ST E++G+ E + E + P +PY+ K + + Y
Sbjct: 110 LEALRTVKPDTKFYQASTSEMFGKVQE---IPQTEKTPFYPRSPYAVAKLFGHWITVNYR 166
Query: 175 RSYGL 179
+Y +
Sbjct: 167 EAYNM 171
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 53 SKASSNFKFVKGDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIY 109
+ N K GD+ D + I + I + AQ+HV SF + E+T + +
Sbjct: 75 AHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA-EYTADVDGV 131
Query: 110 GTHVLLEACKVTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167
GT LL+A K G I +F ST E+YG+ E + E + P +PY A K A
Sbjct: 132 GTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAY 188
Query: 168 MLVMAYGRSYGL 179
+V+ + +Y L
Sbjct: 189 WIVVNFREAYNL 200
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 67/271 (24%)
Query: 8 NILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLI--PSKASS--NFKFV 62
I I G+ G + + L +Y + + N K V
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQ----IYA-----------GARKVEQVPQYNNVKAV 46
Query: 63 KGDIA--SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
D+ ++ L +D I++ + S G S ++YG L++A +
Sbjct: 47 HFDVDWTPEEMAKQL---HGMDAIINVSG------SGGKSLLKV--DLYGAVKLMQAAEK 95
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
++RFI +ST + +G + Y K A++ + + L
Sbjct: 96 AE-VKRFILLST---IFSLQPEKWIG----AGFDALKDYYIAKHFADLYLT---KETNLD 144
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECIL 239
+ P E+ I + SN DVA+ E ++
Sbjct: 145 YTIIQ------PGALTEEEATGLIDIND-------EVSASNTI-----GDVADTIKELVM 186
Query: 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFS 270
+G V ++ K + + + L
Sbjct: 187 TDHSIGKVISMHNGKT----AIKEALESLLE 213
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 44/313 (14%), Positives = 95/313 (30%), Gaps = 65/313 (20%)
Query: 7 KNILITGAAGFIASHVCNRLIR-NYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD 65
+ I+I G G+I + + ++P + D + L S ++G+
Sbjct: 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64
Query: 66 IASAD-LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
+ + +V+ L + +D ++ + + ++ A K G I
Sbjct: 65 MEEHEKMVSVL---KQVDIVISALPFPMISSQIH---------------IINAIKAAGNI 106
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+RF+ +G +ED + L P K ++ + LP T
Sbjct: 107 KRFLPSD----FG-CEEDRI------KPLPPFESVLEKKR----IIRRAIEAAALPY-TY 150
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244
N + + + R + I+G G Y ED+A+ +
Sbjct: 151 VSANCF--GAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR- 207
Query: 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304
+ K+I S N+ + + L + +
Sbjct: 208 -------CCNRIVIYRPPKNI---------IS--------QNELISLW--EAKSGLSFKK 241
Query: 305 RTIWEEGLRKTIE 317
+ +E L + +
Sbjct: 242 VHMPDEQLVRLSQ 254
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 2e-07
Identities = 25/246 (10%), Positives = 68/246 (27%), Gaps = 38/246 (15%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVL--DKLDYCSNLKNLIPSKASSNFKFVKGD 65
I + GA G S + R ++++ + D P KA+
Sbjct: 2 KIAVLGATGRAGSAIVAEARRR--GHEVLAVVRD------------PQKAADRLGATVAT 47
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ LV +S+D ++ + ++ L+ + +
Sbjct: 48 LVKEPLVLTEADLDSVDAVVDALS-------VPWGSGRGYLHLDFATHLVSLLRNSD-TL 99
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
+ + + + ++ + + + P+ + + I
Sbjct: 100 AVFILGSASLAMPGADHPMIL--DFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILHKGEV 244
+ + + L + DG +S++ ++A A + + H +
Sbjct: 158 PSEAFPSGPATSYVAG--------KDTLLVGEDG---QSHITTGNMALAILDQLEHPTAI 206
Query: 245 GHVYNV 250
V
Sbjct: 207 RDRIVV 212
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 4e-07
Identities = 44/202 (21%), Positives = 70/202 (34%), Gaps = 24/202 (11%)
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
Q R ++ST VYG+ D V E + L PT + AE A LP
Sbjct: 92 AAQFRWVGYLSTTAVYGDHDGAWVD---ETTPLTPTAARGRWRVMAEQQWQA---VPNLP 145
Query: 181 VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
+ R +YGP + P + + V S ++ ED+A+ +
Sbjct: 146 LHVFRLAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMA 197
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK---- 296
+ + G VYNV + DV +L + ++ F + R F + K
Sbjct: 198 RPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRN 257
Query: 297 ---LTSLGWSER--TIWEEGLR 313
LG + + GL
Sbjct: 258 DRIKEELGVRLKYPN-YRVGLE 278
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 4e-07
Identities = 36/241 (14%), Positives = 76/241 (31%), Gaps = 33/241 (13%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK 60
M +LI G G+I + N I ++ ++ + ++ K
Sbjct: 1 MDK--KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 58
Query: 61 FVKGDIASAD-LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
++ + LV+ L + +D ++ A + ++I L+EA K
Sbjct: 59 LIEASLDDHQRLVDAL---KQVDVVISALAGGVLS-----------HHILEQLKLVEAIK 104
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
G I+RF+ +G + + L P + K + +
Sbjct: 105 EAGNIKRFLPSE----FG------MDPDIMEHALQPGSITFIDKRKVR----RAIEAASI 150
Query: 180 PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239
P N G + ++ + I+GDG+ ++ +DV +
Sbjct: 151 PYTYVSSNMFAGYFAGSLAQLDGHMMPPRD--KVLIYGDGNVKGIWVDEDDVGTYTIKSI 208
Query: 240 H 240
Sbjct: 209 D 209
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 5e-07
Identities = 40/238 (16%), Positives = 75/238 (31%), Gaps = 39/238 (16%)
Query: 5 TPKNILITGAAGFIASHVCNRLIR-NYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFV 62
T ILI G G I H+ I+ P Y +V + LI + S +
Sbjct: 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 63 KGDIASAD-LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
+GDI + LV + + +D + A + I +++A K
Sbjct: 61 EGDINDHETLVKAI---KQVDIV--ICAAGRLL-------------IEDQVKIIKAIKEA 102
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
G +++F +G + + P KA ++ + G+P
Sbjct: 103 GNVKKFFPSE----FG-------LDVDRHDAVEPVRQVFEEKASIRRVI----EAEGVPY 147
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239
+ + + + + + I GDG+ +Y+ DV
Sbjct: 148 TYLCCHAFT---GYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 43/267 (16%), Positives = 83/267 (31%), Gaps = 53/267 (19%)
Query: 1 MA-TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF 59
M ILI G G+I +H+ ++ + V + + S+ L+ S
Sbjct: 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPN--SSKTTLLDEFQSLGA 60
Query: 60 KFVKGDIASAD-LVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
VKG++ + LV + + +D ++ A + +LEA
Sbjct: 61 IIVKGELDEHEKLVELM---KKVDVVISALAFPQIL---------------DQFKILEAI 102
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
KV G I+RF+ +G +ED + + L P K ++
Sbjct: 103 KVAGNIKRFLPSD----FG-VEEDRI------NALPPFEALIERKR----MIRRAIEEAN 147
Query: 179 LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238
+P N F I + + ++G G + Y +D+ +
Sbjct: 148 IPYT------YVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKV 201
Query: 239 LHKGEVGHVYNVGTKKERRVIDVAKDI 265
+ + +I
Sbjct: 202 ATDPR--------ALNRVVIYRPSTNI 220
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 2e-06
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 14/134 (10%)
Query: 53 SKASSNFKFVKGDIASADLVNFLLITESI--DTIMHFAAQTHVDNSFGNSFEFTKN-NIY 109
+ + K D+ D + + I D + + AAQ+HV SF ++T +
Sbjct: 79 NVNKALMKLHYADLT--DASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVAT 135
Query: 110 GTHVLLEACKVTGQIR----RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165
G LLEA + ++ + E++G T E + P +PY+A+K
Sbjct: 136 GALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHPRSPYAASKCA 191
Query: 166 AEMLVMAYGRSYGL 179
A + Y +YGL
Sbjct: 192 AHWYTVNYREAYGL 205
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 6e-06
Identities = 44/254 (17%), Positives = 78/254 (30%), Gaps = 60/254 (23%)
Query: 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL--DKLDYCSNLKNLIPSKASSNFK 60
TPK +L+ GA G H+ +R++ K++ L L N +
Sbjct: 2 HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPV-----GPLA 56
Query: 61 FVKGDI-ASADLVNFLL-ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEAC 118
+ + S D L T A VD F+ + +
Sbjct: 57 ELLPQLDGSIDTAFCCLGTTIKEA--GSEEAFRAVD------FDLPLA-------VGKRA 101
Query: 119 KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
G R ++ VS A+ + ++S Y+ K E + + G
Sbjct: 102 LEMG-ARHYLVVS-----------ALGADAKSS-----IFYNRVKGELEQAL----QEQG 140
Query: 179 LPVIT-TRGNNVYGP--NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235
P +T R + ++GP +++ I + G I D+A A
Sbjct: 141 WPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEA-----------CDLARAL 189
Query: 236 -ECILHKGEVGHVY 248
L +G+
Sbjct: 190 WRLALEEGKGVRFV 203
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 7e-06
Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 41/177 (23%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL--DKLDYCSNLKNLIPSKASSNF----K 60
KN+LI GA G IA HV N+L K + P+K + +
Sbjct: 24 KNVLILGAGGQIARHVINQLADK-QTIKQTLFARQ------------PAKIHKPYPTNSQ 70
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
+ GD+ + + + + D + +A T D + ++ A K
Sbjct: 71 IIMGDVLNHAALKQAM--QGQDIV--YANLTGEDLD------------IQANSVIAAMKA 114
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
++R I V + +Y E V N+ A + A G Y
Sbjct: 115 CD-VKRLIFVLSLGIYDEVPGKFVEWNNAV-----IGEPLKPFRRAADAIEASGLEY 165
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 2e-05
Identities = 33/254 (12%), Positives = 60/254 (23%), Gaps = 60/254 (23%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL----DKLDYCSNLKNLIPSKA-SSNFKF 61
K++ I GA+G + ++ K+ ++ D KN+
Sbjct: 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-EAYKNVNQEVVDFEKLDD 77
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
D+ F + T A + F + + E K
Sbjct: 78 YASAFQGHDVG-FCCLG----TTRGKA----------GAEGFVRVDRDYVLKSAELAKAG 122
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
G + F +S+ G ++S Y K E V
Sbjct: 123 G-CKHFNLLSS------------KGADKSS----NFLYLQVKGEVEAKV----EELKFDR 161
Query: 182 ITT-RGNNVYGPNQ---FPEKLIPKFILLAMRGLPL--PIHGDGSNVRSYLYCEDVAEAF 235
+ R + Q E L+ KF + V A
Sbjct: 162 YSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPV-----------VTVVRAM 210
Query: 236 -ECILHKGEVGHVY 248
++ +
Sbjct: 211 LNNVVRPRDKQMEL 224
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 8e-05
Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 45/174 (25%)
Query: 383 SMKFLIYGRTGWIGGLLGKLCEKEGI----------PFEYGKGRLEDCSSLIADVQSVK- 431
+ I G +G G +L K ++G+ + + ++ + + D + +
Sbjct: 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDD 77
Query: 432 -------PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYAT 484
F G T ++ +R + L A++ + G N
Sbjct: 78 YASAFQGHDVGFCCLGTTRG------KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLL- 130
Query: 485 GCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE--YDNVCTLR 536
S G + Y + K VE ++E +D R
Sbjct: 131 -------------SSKG-----ADKSSNFLYLQVKGEVEAKVEELKFDRYSVFR 166
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 6e-05
Identities = 38/239 (15%), Positives = 68/239 (28%), Gaps = 34/239 (14%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKG 64
+LI GA GFI V + + I+ + + + V G
Sbjct: 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG-PRSPSKAKIFKALEDKGAIIVYG 67
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
I + + +L ID ++ + L++A K G I
Sbjct: 68 LINEQEAMEKILKEHEIDIVVSTVGGESIL---------------DQIALVKAMKAVGTI 112
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+RF+ D + A + P K LV G + T
Sbjct: 113 KRFLPSEFG-----HDVN------RADPVEPGLNMYREKRRVRQLVEESGIPF-----TY 156
Query: 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
N + + P +L I+GDG+ ++ D+ + +
Sbjct: 157 ICCNSIASWPYYNNIHPSEVLPPTDF--FQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR 213
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 668 | |||
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.98 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.98 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.98 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.97 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.97 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.97 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.96 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.96 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.96 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.96 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.96 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.96 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.95 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.95 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.94 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.94 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.94 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.94 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.94 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.94 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.93 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.93 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.93 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.93 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.93 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.92 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.92 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.92 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.91 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.91 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.91 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.91 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.91 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.9 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.9 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.9 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.9 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.9 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.9 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.89 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.89 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.89 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.89 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.89 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.88 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.88 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.88 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.88 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.88 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.88 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.88 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.87 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.87 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.87 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.87 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.87 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.86 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.86 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.86 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.86 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.86 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.86 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.86 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.86 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.86 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.86 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.86 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.86 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.85 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.85 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.85 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.85 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.85 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.85 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.85 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.85 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.85 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.85 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.85 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.85 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.85 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.84 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.84 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.84 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.84 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.84 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.84 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.84 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.84 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.84 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.84 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.84 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.84 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.84 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.84 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.84 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.84 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.84 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.84 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.84 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.84 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.84 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.84 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.83 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.83 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.83 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.83 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.83 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.83 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.83 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.83 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.83 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.83 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.83 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.83 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.83 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.83 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.83 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.83 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.83 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.83 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.83 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.83 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.83 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.82 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.82 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.82 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.82 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.82 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.82 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.82 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.82 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.82 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.82 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.82 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.82 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.82 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.82 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.82 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.82 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.82 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.82 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.82 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.82 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.82 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.82 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.82 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.82 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.82 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.82 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.82 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.82 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.82 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.82 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.82 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.82 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.82 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.82 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.82 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.82 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.82 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.81 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.81 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.81 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.81 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.81 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.81 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.81 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.81 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.81 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.81 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.81 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.81 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.81 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.81 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.81 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.81 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.81 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.81 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.81 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.81 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.81 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.81 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.81 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.8 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.8 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.8 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.8 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.8 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.8 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.8 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.8 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.8 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.8 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.8 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.79 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.79 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.79 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.79 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.79 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.79 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.79 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.79 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.79 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.79 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.79 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.79 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.79 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.79 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.78 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.78 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.78 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.78 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.78 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.78 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.78 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.78 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.78 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.77 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.77 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.77 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.77 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.77 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.77 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.76 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.76 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.76 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.76 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.76 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.76 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.76 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.76 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.76 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.76 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.75 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.75 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.75 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.74 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.74 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.74 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.73 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.73 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.73 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.73 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.73 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.73 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.72 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.72 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.72 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.72 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.72 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.72 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.72 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.72 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.72 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.72 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.72 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.72 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.72 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.72 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.71 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.71 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.71 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.71 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.71 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.71 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.71 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.71 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.71 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.71 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.7 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.7 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.7 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.7 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.7 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.7 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.7 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.7 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.7 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.7 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.7 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.7 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.7 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.7 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.7 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.7 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.7 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.69 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.69 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.69 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.69 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.69 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.69 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.69 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.69 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.69 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.69 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.69 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.69 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.69 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.69 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.69 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.69 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.68 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.68 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.68 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.68 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.68 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.68 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.68 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.68 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.68 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.68 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.68 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.68 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.68 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.68 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.68 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.68 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.67 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.67 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.67 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.67 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.67 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.67 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.67 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.67 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.67 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.67 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.67 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.67 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.66 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.66 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.66 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.66 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.66 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.66 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.66 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.66 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.66 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.66 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.66 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.66 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.66 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.66 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.66 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.66 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.66 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.66 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.65 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.65 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.65 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.65 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.65 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.65 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.65 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.65 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.65 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.65 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.65 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.64 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.64 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.64 |
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=387.03 Aligned_cols=322 Identities=39% Similarity=0.742 Sum_probs=270.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
++++|+|||||||||||++|++.|+++|+.++|++++|.........+.......+++++.+|+.|.+.+.+++...++|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 34578999999999999999999999977799999998754333333333333468999999999999999999655699
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|||+||......+..++...+++|+.++.+++++|++.+ +++|||+||.++|+...... ..+|+++..|.+.|+.+
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~--~~~E~~~~~p~~~Y~~s 177 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTG--RFTEETPLAPNSPYSSS 177 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSC--CBCTTSCCCCCSHHHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCC--CcCCCCCCCCCChhHHH
Confidence 9999999877665667788999999999999999999987 89999999999999874322 34788888999999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
|..+|.+++.++++++++++++||++||||+..+..+++.++..+..++++.+++++.+.++|+|++|+|++++.+++.+
T Consensus 178 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 257 (346)
T 4egb_A 178 KASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKG 257 (346)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcC
Confidence 99999999999888899999999999999998777899999999999999999899999999999999999999999988
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHhh
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
..+++||+++++++|+.|+++.+.+.+|.+.. .+.+.+..+.....+.+|++|++ +|||+|+++++++|+++++||++
T Consensus 258 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 336 (346)
T 4egb_A 258 RVGEVYNIGGNNEKTNVEVVEQIITLLGKTKK-DIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEK 336 (346)
T ss_dssp CTTCEEEECCSCCEEHHHHHHHHHHHHTCCGG-GCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCceeHHHHHHHHHHHhCCCcc-cccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 88889999999999999999999999998654 24444555555566789999997 59999999999999999999999
Q ss_pred CCCcccc
Q 005949 322 NPDWWGD 328 (668)
Q Consensus 322 ~~~~~~~ 328 (668)
+..+|..
T Consensus 337 ~~~~~~~ 343 (346)
T 4egb_A 337 NEEWWKP 343 (346)
T ss_dssp CHHHHGG
T ss_pred hhhhhhh
Confidence 8877664
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=364.42 Aligned_cols=318 Identities=42% Similarity=0.736 Sum_probs=261.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
++|+|||||||||||+++++.|+++|++++|++++|.........+.......+++++.+|+.|.+.+.+++ .++|+|
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v 79 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV--RKVDGV 79 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH--HTCSEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh--hCCCEE
Confidence 446899999999999999999999976689999988642222222211112357899999999999999998 689999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
||+||......+..++...+++|+.++.+++++|.+.+..++||++||.++||..... +.+|+.+..|.+.|+.+|.
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~---~~~E~~~~~~~~~Y~~sK~ 156 (336)
T 2hun_A 80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKG---SFTENDRLMPSSPYSATKA 156 (336)
T ss_dssp EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSS---CBCTTBCCCCCSHHHHHHH
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCC---CcCCCCCCCCCCccHHHHH
Confidence 9999986644445677889999999999999999987634799999999999976533 2367777788899999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
.+|.+++.++.+++++++++||++||||+..+..+++.++..+..+..+.+++++.+.++|+|++|+|++++.+++.+..
T Consensus 157 ~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~ 236 (336)
T 2hun_A 157 ASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES 236 (336)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC
Confidence 99999999988889999999999999999766677888888888888888888888999999999999999999987777
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCCHHHHHHHHHHHHhhCC
Q 005949 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
+++||++++.++|+.|+++.+.+.+|.+.+ .+.+.+.++.....+.+|++|+++ |||+|+++++++|+++++||+++.
T Consensus 237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 315 (336)
T 2hun_A 237 REIYNISAGEEKTNLEVVKIILRLMGKGEE-LIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNE 315 (336)
T ss_dssp TCEEEECCSCEECHHHHHHHHHHHTTCCST-TEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHTH
T ss_pred CCEEEeCCCCcccHHHHHHHHHHHhCCCcc-cccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence 889999999999999999999999998643 234434444444456789999975 999999999999999999999876
Q ss_pred Ccccc
Q 005949 324 DWWGD 328 (668)
Q Consensus 324 ~~~~~ 328 (668)
.++..
T Consensus 316 ~~~~~ 320 (336)
T 2hun_A 316 WWWKP 320 (336)
T ss_dssp HHHGG
T ss_pred cceee
Confidence 54443
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=358.12 Aligned_cols=302 Identities=21% Similarity=0.286 Sum_probs=254.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+|||||||||||++|++.|+++ +++|++++|.. .... + .+++++.+|+. .+.+.+++ .++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~--~~~~-~------~~~~~~~~Dl~-~~~~~~~~--~~~d~Vi 67 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSI--GNKA-I------NDYEYRVSDYT-LEDLINQL--NDVDAVV 67 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCC--C------------CCEEEECCCC-HHHHHHHT--TTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCC--Cccc-C------CceEEEEcccc-HHHHHHhh--cCCCEEE
Confidence 479999999999999999999999 68999999862 1111 1 27899999999 99999998 5899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+|+..... ++...++.|+.++.+++++|++.+ +++|||+||..+|+.....+ .+|+++..|.+.|+.+|..
T Consensus 68 h~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y~~sK~~ 139 (311)
T 3m2p_A 68 HLAATRGSQ----GKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLP---WNEKELPLPDLMYGVSKLA 139 (311)
T ss_dssp ECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCS---BCTTSCCCCSSHHHHHHHH
T ss_pred EccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCC---CCCCCCCCCCchhHHHHHH
Confidence 999986543 667888999999999999999987 89999999999999875443 3777888899999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCC
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 245 (668)
+|.+++.++++.+++++++||+++|||+..+..+++.+++.+..+.++.+++++.+.++|+|++|+|++++.+++++..+
T Consensus 140 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~ 219 (311)
T 3m2p_A 140 CEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS 219 (311)
T ss_dssp HHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCC
Confidence 99999999888899999999999999998766889999999999999988888999999999999999999999988788
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC-CCCCCcccccChHHHHh-CCCcccCCHHHHHHHHHHHHhhCC
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN-RPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
++||+++++.+|+.|+++.+++.+|.+.. +...+. .+.......+|++|+++ |||+|+++++++|+++++|+++..
T Consensus 220 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 297 (311)
T 3m2p_A 220 GTFNIGSGDALTNYEVANTINNAFGNKDN--LLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLD 297 (311)
T ss_dssp EEEEECCSCEECHHHHHHHHHHHTTCTTC--EEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC--
T ss_pred CeEEeCCCCcccHHHHHHHHHHHhCCCCc--ceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998754 333333 44455668899999986 999999999999999999999998
Q ss_pred CcccccCC
Q 005949 324 DWWGDVSG 331 (668)
Q Consensus 324 ~~~~~~~~ 331 (668)
..|..+.+
T Consensus 298 ~~~~~~~~ 305 (311)
T 3m2p_A 298 DVPLWYEG 305 (311)
T ss_dssp --------
T ss_pred cCcceecc
Confidence 87776543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=365.53 Aligned_cols=311 Identities=27% Similarity=0.413 Sum_probs=261.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCc---CCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSK---ASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|++|+|||||||||||++|++.|+++ +++|++++|...... ...+.... ...+++++.+|+.|.+.+.+++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 98 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-- 98 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--
Confidence 35689999999999999999999999 689999988643211 00000000 0057999999999999999999
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
.++|+|||+||......+..++...+++|+.++.+++++|++.+ +++|||+||.++||.....+ .+|+.+..|.+.
T Consensus 99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~---~~E~~~~~p~~~ 174 (351)
T 3ruf_A 99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALP---KVEENIGNPLSP 174 (351)
T ss_dssp TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSS---BCTTCCCCCCSH
T ss_pred cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCC---CccCCCCCCCCh
Confidence 58999999999876666667888899999999999999999987 89999999999999876543 377888889999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
|+.+|..+|.+++.++++++++++++||++||||+..+. .+++.++..+..++++.+++++.+.++|+|++|+|++
T Consensus 175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 254 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM 254 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999999999888899999999999999987654 6788899999999999988999999999999999999
Q ss_pred HHHHHhc--CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc---ceEeccCCCCCCcccccChHHHHh-CCCcccCCH
Q 005949 235 FECILHK--GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPET---SIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIW 308 (668)
Q Consensus 235 i~~~~~~--~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~ 308 (668)
++.+++. ...+++||+++++.+|+.|+++.+.+.+|..+.. .+...+..+.......+|++|+++ |||+|++++
T Consensus 255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 334 (351)
T 3ruf_A 255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKI 334 (351)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCH
T ss_pred HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCH
Confidence 9999887 3467899999999999999999999999984321 122333344455667899999985 999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005949 309 EEGLRKTIEWYTQN 322 (668)
Q Consensus 309 ~~~l~~~~~~~~~~ 322 (668)
+++|+++++||+++
T Consensus 335 ~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 335 REGLRLSMPWYVRF 348 (351)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=354.15 Aligned_cols=315 Identities=39% Similarity=0.707 Sum_probs=261.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHh-CCC---CEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRN-YPE---YKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~-g~~---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
|+|||||||||||++|++.|+++ +++ ++|++++|.........+.......+++++.+|++|.+.+.+++ .++|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh--cCCC
Confidence 48999999999999999999995 656 89999988642111111111112357899999999999999998 7899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|||+||......+..++...+++|+.++.+++++|.+.+ +++||++||.++||..... +.+|+.+..|.+.|+.+
T Consensus 79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~---~~~E~~~~~~~~~Y~~s 154 (337)
T 1r6d_A 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSG---SWTESSPLEPNSPYAAS 154 (337)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSS---CBCTTSCCCCCSHHHHH
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCC---CCCCCCCCCCCCchHHH
Confidence 9999999866444456777899999999999999999976 8899999999999976532 23677777888999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
|..+|.+++.++.+++++++++||+++|||+..+..+++.++..+..+.++.+++++.+.++|+|++|+|++++.+++.+
T Consensus 155 K~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 234 (337)
T 1r6d_A 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (337)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence 99999999999888899999999999999998666788888888888888888888999999999999999999999877
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHhh
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
..+++||++++.++|+.|+++.+.+.+|.+.+ .+.+.+.++.....+.+|++|++ .|||+|+++++++|+++++||++
T Consensus 235 ~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 313 (337)
T 1r6d_A 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313 (337)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGG-GEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcc-cceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 77889999999999999999999999998642 23443444433445678999997 49999999999999999999998
Q ss_pred CCCcccc
Q 005949 322 NPDWWGD 328 (668)
Q Consensus 322 ~~~~~~~ 328 (668)
+..+|.+
T Consensus 314 ~~~~~~~ 320 (337)
T 1r6d_A 314 NRGWWEP 320 (337)
T ss_dssp CHHHHGG
T ss_pred chhcccc
Confidence 7655444
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=353.85 Aligned_cols=312 Identities=25% Similarity=0.380 Sum_probs=256.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCc--cccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL--KNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
++|+|||||||||||+++++.|+++ +++|++++|....... ..+ ......++.++.+|++|.+.+.+++...++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARI-EKITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHH-HHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHH-HhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 4679999999999999999999999 7889999886432110 000 0001346889999999999999999666899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|||+||.........++.+.++.|+.++.++++++++.+ +++||++||.++||.....+ .+|+.+..|.+.|+.+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~---~~e~~~~~~~~~Y~~s 156 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSP---IDETFPLSATNPYGQT 156 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSS---BCTTSCCBCSSHHHHH
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCC---CCCCCCCCCCChhHHH
Confidence 9999999876555566778899999999999999999976 88999999999998865443 3677788889999999
Q ss_pred HHHHHHHHHHHHHhcC-CCEEEEeeCceeCCCCC----------CCChHHHHHHHHHcC-CCceeec------CCCceEe
Q 005949 163 KAGAEMLVMAYGRSYG-LPVITTRGNNVYGPNQF----------PEKLIPKFILLAMRG-LPLPIHG------DGSNVRS 224 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~ 224 (668)
|..+|.+++.++.+++ ++++++||++||||+.. ...+++.+.+..... ..+.+++ ++.+.++
T Consensus 157 K~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 236 (341)
T 3enk_A 157 KLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRD 236 (341)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEEC
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEe
Confidence 9999999999988775 99999999999999541 235666655554433 4566666 7899999
Q ss_pred ceeHHHHHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hC
Q 005949 225 YLYCEDVAEAFECILHK---GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SL 300 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~---~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l 300 (668)
|+|++|+|++++.+++. ...+++||+++++++|+.|+++.+.+.+|.+.+ +...+.++.......+|++|++ +|
T Consensus 237 ~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~l 314 (341)
T 3enk_A 237 YIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVP--YELVARRPGDVAECYANPAAAAETI 314 (341)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCHHHHHHH
T ss_pred eEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcc--eeeCCCCCCCccccccCHHHHHHHc
Confidence 99999999999998876 346789999999999999999999999998755 4444555556667889999997 59
Q ss_pred CCcccCCHHHHHHHHHHHHhhCCCc
Q 005949 301 GWSERTIWEEGLRKTIEWYTQNPDW 325 (668)
Q Consensus 301 G~~~~~~~~~~l~~~~~~~~~~~~~ 325 (668)
||+|+++++++|+++++||+++...
T Consensus 315 G~~p~~~l~~~l~~~~~~~~~~~~~ 339 (341)
T 3enk_A 315 GWKAERDLERMCADHWRWQENNPRG 339 (341)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHSTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999998753
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=350.27 Aligned_cols=299 Identities=29% Similarity=0.440 Sum_probs=244.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
||+|||||||||||++|++.|+++ +. ++++++.... ... ....+++++.+|+.| +.+.+++ .++|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~-~v~~~~~~~~-~~~-----~~~~~~~~~~~Dl~~-~~~~~~~--~~~d~vi 68 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--NE-IVVIDNLSSG-NEE-----FVNEAARLVKADLAA-DDIKDYL--KGAEEVW 68 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--SC-EEEECCCSSC-CGG-----GSCTTEEEECCCTTT-SCCHHHH--TTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CC-EEEEEcCCCC-Chh-----hcCCCcEEEECcCCh-HHHHHHh--cCCCEEE
Confidence 468999999999999999999998 44 4444443221 111 113578999999999 8888888 6899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+|+......+..++...+++|+.++.++++++++.+ +++||++||..+||.....+ .+|+.+..|.++|+.+|..
T Consensus 69 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~---~~E~~~~~~~~~Y~~sK~~ 144 (313)
T 3ehe_A 69 HIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIP---TPEDYPTHPISLYGASKLA 144 (313)
T ss_dssp ECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSS---BCTTSCCCCCSHHHHHHHH
T ss_pred ECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCC---CCCCCCCCCCCHHHHHHHH
Confidence 9999876666678889999999999999999999987 88999999999999876443 3677788889999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC-CCceeecCCCceEeceeHHHHHHHHHHHHhcCCC
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
+|.+++.++.+++++++++||++||||+... .++..++..+..+ ..+.+++++.+.++|+|++|+|++++.+++....
T Consensus 145 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~ 223 (313)
T 3ehe_A 145 CEALIESYCHTFDMQAWIYRFANVIGRRSTH-GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDER 223 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCEESTTCCC-SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHHhcCCCEEEEeeccccCcCCCc-ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCC
Confidence 9999999998889999999999999998753 5666777766665 5566788999999999999999999999996667
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC---CCCCCcccccChHHHHhCCCcccCCHHHHHHHHHHHHhh
Q 005949 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN---RPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
+++||+++++++|+.|+++.+++.+|.++. +.+.+. .+.......+|++|+++|||+|+++++++|+++++||++
T Consensus 224 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~ 301 (313)
T 3ehe_A 224 VNIFNIGSEDQIKVKRIAEIVCEELGLSPR--FRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVE 301 (313)
T ss_dssp EEEEECCCSCCEEHHHHHHHHHHHTTCCCE--EEEC------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred CceEEECCCCCeeHHHHHHHHHHHhCCCCc--eEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 789999999999999999999999998754 222221 122334567899999999999999999999999999998
Q ss_pred CC
Q 005949 322 NP 323 (668)
Q Consensus 322 ~~ 323 (668)
+.
T Consensus 302 ~~ 303 (313)
T 3ehe_A 302 DL 303 (313)
T ss_dssp HH
T ss_pred Cc
Confidence 65
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=349.40 Aligned_cols=316 Identities=38% Similarity=0.616 Sum_probs=259.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
|++ ||+|||||||||||++|++.|++++++++|++++|.........+. .....+++++.+|++|.+.+.+++ .+
T Consensus 1 Ms~--m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~--~~ 75 (348)
T 1oc2_A 1 MSQ--FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADAELVDKLA--AK 75 (348)
T ss_dssp --C--CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCHHHHHHHH--TT
T ss_pred CCc--CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-hhccCCeEEEECCCCCHHHHHHHh--hc
Confidence 553 4799999999999999999999997678999998864221111111 111357899999999999999999 67
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC---------cCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED---------AVVGNHEAS 151 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~---------~~~~~~e~~ 151 (668)
+|+|||+||......+..++...+++|+.++.+++++|.+.+ + +||++||.++||..... ...+.+|++
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~ 153 (348)
T 1oc2_A 76 ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET 153 (348)
T ss_dssp CSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred CCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCC
Confidence 899999999876444456778899999999999999999987 5 99999999999875320 012346777
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+..|.+.|+.+|..+|.+++.++.+++++++++||++||||+..+..+++.++..+..+.++.+++++.+.++|+|++|+
T Consensus 154 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 233 (348)
T 1oc2_A 154 NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDH 233 (348)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHH
Confidence 77888999999999999999998888999999999999999986667888888888888888888888999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCC-HH
Q 005949 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTI-WE 309 (668)
Q Consensus 232 a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~-~~ 309 (668)
|++++.+++.+..+++||++++.++|+.|+++.+.+.+|.+.. .+.+.+.++.....+.+|++|+++ |||+|+++ ++
T Consensus 234 a~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 312 (348)
T 1oc2_A 234 STGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFS 312 (348)
T ss_dssp HHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT-CSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred HHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcc-ccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHH
Confidence 9999999987777889999999999999999999999998643 233334444444556799999975 99999988 99
Q ss_pred HHHHHHHHHHhhCCC
Q 005949 310 EGLRKTIEWYTQNPD 324 (668)
Q Consensus 310 ~~l~~~~~~~~~~~~ 324 (668)
++|+++++|++++..
T Consensus 313 ~~l~~~~~~~~~~~~ 327 (348)
T 1oc2_A 313 EGLEETIQWYTDNQD 327 (348)
T ss_dssp HHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998654
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=344.33 Aligned_cols=301 Identities=26% Similarity=0.386 Sum_probs=252.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
++|+|||||||||||++|++.|+++ +++|++++|.... .. .+++++.+|+.|.+.+.+++...++|+|
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~---~~-------l~~~~~~~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA---KL-------PNVEMISLDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC---CC-------TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc---cc-------ceeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 4689999999999999999999999 6899999886432 11 1688999999999999999865569999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCC--CCCcCCCCCCCCCCCCCChhHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET--DEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~--~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
||+||......+..++...+++|+.++.+++++|++.+.+++||++||..+|+.. ... +.+|+++..|.+.|+.+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~---~~~E~~~~~~~~~Y~~s 155 (321)
T 2pk3_A 79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEES---PVSEENQLRPMSPYGVS 155 (321)
T ss_dssp EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGC---SBCTTSCCBCCSHHHHH
T ss_pred EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCC---CCCCCCCCCCCCccHHH
Confidence 9999987655556688899999999999999999876347999999999999875 322 23677788888999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc---C--CCceeecCCCceEeceeHHHHHHHHHH
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR---G--LPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
|..+|.+++.++.+++++++++||+++|||+.....+++.++..+.. + .++.+.+++.+.++|+|++|+|++++.
T Consensus 156 K~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~ 235 (321)
T 2pk3_A 156 KASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWL 235 (321)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHH
Confidence 99999999999888899999999999999988666677777776665 6 566777888899999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEecc--CCCCCCcccccChHHHHh-CCCcccCCHHHHHHH
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVE--NRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRK 314 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~ 314 (668)
+++.+..+++||++++..+|+.|+++.+.+.+|.+.. +...+ .++.......+|++|+++ |||+|+++++++|++
T Consensus 236 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~ 313 (321)
T 2pk3_A 236 LSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKID--TELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFE 313 (321)
T ss_dssp HHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCE--EEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred HHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCc--eeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHH
Confidence 9988767889999999999999999999999998643 22323 233344567899999975 899999999999999
Q ss_pred HHHHHhhC
Q 005949 315 TIEWYTQN 322 (668)
Q Consensus 315 ~~~~~~~~ 322 (668)
+++||+++
T Consensus 314 ~~~~~~~~ 321 (321)
T 2pk3_A 314 ILQSYRQA 321 (321)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999863
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=357.41 Aligned_cols=312 Identities=22% Similarity=0.383 Sum_probs=252.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCC-CHHHHHHHhccC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA-SADLVNFLLITE 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~ 79 (668)
|..|+||+|||||||||||++|++.|++++ +++|++++|.... ...+ ....+++++.+|+. |.+.+.+++ .
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~--~~~~---~~~~~v~~~~~Dl~~d~~~~~~~~--~ 90 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDMQTDR--LGDL---VKHERMHFFEGDITINKEWVEYHV--K 90 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEESCCTT--TGGG---GGSTTEEEEECCTTTCHHHHHHHH--H
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeCChhh--hhhh---ccCCCeEEEeCccCCCHHHHHHHh--c
Confidence 556778999999999999999999999983 5789999886421 1111 11358999999999 999999998 5
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC------
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL------ 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~------ 153 (668)
++|+|||+|+.........++.+.+++|+.++.+++++|++.+ ++|||+||.++||.....+. +|++..
T Consensus 91 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~---~e~~~~~~~~p~ 165 (372)
T 3slg_A 91 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQF---DPDASALTYGPI 165 (372)
T ss_dssp HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSB---CTTTCCEEECCT
T ss_pred cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCC---CccccccccCCC
Confidence 8999999999877655567888999999999999999999987 89999999999998765443 333322
Q ss_pred -CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 154 -LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 154 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
.|.+.|+.+|..+|.+++.++++ +++++++||++||||+..+ ..+++.++..+..++++.+++++.+.++
T Consensus 166 ~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 244 (372)
T 3slg_A 166 NKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRA 244 (372)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEE
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEE
Confidence 46668999999999999999887 9999999999999998642 3578889999999999998888999999
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcC-CCcccHHHHHHHHHHHhCCCCCcc-----eEeccC--------CCCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGT-KKERRVIDVAKDICKLFSMDPETS-----IKFVEN--------RPFND 287 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~-~~~~s~~el~~~i~~~~g~~~~~~-----~~~~~~--------~~~~~ 287 (668)
|+|++|+|++++.+++.+ ..+++||+++ ++.+|+.|+++.+.+.+|.++... ...... .....
T Consensus 245 ~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (372)
T 3slg_A 245 FTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDV 324 (372)
T ss_dssp CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------
T ss_pred EEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCcccc
Confidence 999999999999999876 3688999999 489999999999999998765421 111000 01233
Q ss_pred cccccChHHHHh-CCCcccCCHHHHHHHHHHHHhhCCCcc
Q 005949 288 QRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWW 326 (668)
Q Consensus 288 ~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~~~~~~~~ 326 (668)
....+|++|+++ |||+|+++++++|+++++||+++...+
T Consensus 325 ~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 364 (372)
T 3slg_A 325 QNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADA 364 (372)
T ss_dssp CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHHHH
T ss_pred ceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456789999975 999999999999999999999875433
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=350.57 Aligned_cols=305 Identities=24% Similarity=0.300 Sum_probs=250.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-----cccc--CCCcCCCCeEEEEccCCCHHHHHHHh
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNL--IPSKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|++|+|||||||||||++|++.|++++.+++|++++|...... ...+ .......++.++.+|++|.+.+.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 86 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL- 86 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence 4568999999999999999999999333899999998643110 0000 1112234679999999999999988
Q ss_pred ccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCC
Q 005949 77 ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 156 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 156 (668)
...++|+|||+||.... +..++...+++|+.++.+++++|++.+ ++ ||++||+++||.... +.+|+.+..|.
T Consensus 87 ~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~----~~~E~~~~~p~ 158 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKA----PNVVGKNESPE 158 (362)
T ss_dssp TTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCS----SBCTTSCCCCS
T ss_pred hccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCC----CCCCCCCCCCC
Confidence 22789999999996543 567888999999999999999999977 55 999999999998765 23777888899
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
++|+.+|..+|.+++.++.+ ++++++||++||||+..+. .+++.++..+..+.++.+++++.+.++|+|++|+|
T Consensus 159 ~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 236 (362)
T 3sxp_A 159 NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236 (362)
T ss_dssp SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHH
Confidence 99999999999999988765 9999999999999987543 67888999999998888888899999999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-CCCCcccccChHHHH-hCCCcccCCHHH
Q 005949 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-PFNDQRYFLDDQKLT-SLGWSERTIWEE 310 (668)
Q Consensus 233 ~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~~-~lG~~~~~~~~~ 310 (668)
++++.+++.+..+ +||+++++++|+.|+++.+.+.+| +.. +...+.. +.......+|++|++ .|||+|++++++
T Consensus 237 ~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~--~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e 312 (362)
T 3sxp_A 237 QANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG-DFK--VTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLES 312 (362)
T ss_dssp HHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC-CCE--EECCC-------CCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred HHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC-CCc--eEECCCCCcCcccceecCHHHHHHHhCCCCCCCHHH
Confidence 9999999987666 999999999999999999999999 433 3333333 344456789999995 699999999999
Q ss_pred HHHHHHHHHhhCC
Q 005949 311 GLRKTIEWYTQNP 323 (668)
Q Consensus 311 ~l~~~~~~~~~~~ 323 (668)
+|+++++||++..
T Consensus 313 ~l~~~~~~~~~~~ 325 (362)
T 3sxp_A 313 GIKDYLPHIHAIF 325 (362)
T ss_dssp HHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=347.06 Aligned_cols=311 Identities=26% Similarity=0.373 Sum_probs=255.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCc---CCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSK---ASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|++|+|||||||||||++|++.|+++ +++|++++|..... .+..+.... ...+++++.+|+.|.+.+.+++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 100 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-- 100 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh--
Confidence 45689999999999999999999999 68899998854211 111110000 0247899999999999999998
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
.++|+|||+||......+..++...+++|+.++.+++++|++.+ +++||++||.++|+.....+ .+|+++..|.+.
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~---~~E~~~~~~~~~ 176 (352)
T 1sb8_A 101 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLP---KVEDTIGKPLSP 176 (352)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSS---BCTTCCCCCCSH
T ss_pred cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCC---CCCCCCCCCCCh
Confidence 58999999999865444456778899999999999999999876 89999999999999865433 367777888999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
|+.+|..+|.+++.++.+++++++++||++||||+..+. .+++.++..+..+.++.+++++.+.++|+|++|+|++
T Consensus 177 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (352)
T 1sb8_A 177 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA 256 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 999999999999999888899999999999999987543 5677788888888888888889999999999999999
Q ss_pred HHHHHhc--CCCCceEEEcCCCcccHHHHHHHHHHHh---CCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCH
Q 005949 235 FECILHK--GEVGHVYNVGTKKERRVIDVAKDICKLF---SMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIW 308 (668)
Q Consensus 235 i~~~~~~--~~~~~~~ni~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~ 308 (668)
++.+++. ...+++||+++++.+|+.|+++.+.+.+ |.+......+.+.++.......+|++|++ +|||+|++++
T Consensus 257 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 336 (352)
T 1sb8_A 257 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDV 336 (352)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCH
T ss_pred HHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCH
Confidence 9988876 2367899999999999999999999999 87654322233333334456788999997 5999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005949 309 EEGLRKTIEWYTQN 322 (668)
Q Consensus 309 ~~~l~~~~~~~~~~ 322 (668)
+|+|+++++||+++
T Consensus 337 ~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 337 SAGVALAMPWYIMF 350 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999864
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=347.10 Aligned_cols=297 Identities=18% Similarity=0.296 Sum_probs=246.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+|++|+|||||||||||++|++.|+++|+ +.. .. ...++.+.+|+.|.+.+.+++...++|
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--------~~~--~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~d 63 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG--------LPG--ED---------WVFVSSKDADLTDTAQTRALFEKVQPT 63 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC--------CTT--CE---------EEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC--------ccc--cc---------ccccCceecccCCHHHHHHHHhhcCCC
Confidence 46788999999999999999999999964 110 00 113445579999999999999766799
Q ss_pred EEEEcCccCC-cccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC----CCCCCC
Q 005949 83 TIMHFAAQTH-VDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS----QLLPTN 157 (668)
Q Consensus 83 ~Vih~a~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~----~~~p~~ 157 (668)
+|||+|+... ......++...+++|+.++.+++++|++.+ +++|||+||.++||.....+. +|++ +..|.+
T Consensus 64 ~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~~~~~p~~ 139 (319)
T 4b8w_A 64 HVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPI---DETMIHNGPPHNSN 139 (319)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSB---CGGGGGBSCCCSSS
T ss_pred EEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCc---cccccccCCCCCCc
Confidence 9999999854 223457788899999999999999999987 899999999999998654433 5554 555666
Q ss_pred -hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHH----HHcCCCceeecCCCceEeceeH
Q 005949 158 -PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILL----AMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 158 -~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+|+.+|..+|.+++.++++++++++++||++||||+..+ ..+++.++.. +..+.++.+++++.+.++|+|+
T Consensus 140 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 219 (319)
T 4b8w_A 140 FGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYS 219 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEH
T ss_pred chHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeH
Confidence 599999999999999988889999999999999998743 2466666666 7888889888999999999999
Q ss_pred HHHHHHHHHHHhcCC--CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCccc
Q 005949 229 EDVAEAFECILHKGE--VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSER 305 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~--~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~ 305 (668)
+|+|++++.+++++. .+++||+++++.+|+.|+++.+.+.+|.+.. +...+..+.......+|++|+++ |||.|.
T Consensus 220 ~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~ 297 (319)
T 4b8w_A 220 LDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGE--VTFDTTKSDGQFKKTASNSKLRTYLPDFRF 297 (319)
T ss_dssp HHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSC--EEEETTSCCCCSCCCBCCHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCc--EEeCCCCCcCcccccCCHHHHHHhcCCCCC
Confidence 999999999998743 3669999999999999999999999998654 44445555555667899999985 999999
Q ss_pred CCHHHHHHHHHHHHhhCCC
Q 005949 306 TIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 306 ~~~~~~l~~~~~~~~~~~~ 324 (668)
++++++|+++++||+++..
T Consensus 298 ~~~~~~l~~~~~~~~~~~~ 316 (319)
T 4b8w_A 298 TPFKQAVKETCAWFTDNYE 316 (319)
T ss_dssp CCHHHHHHHHHHHHHHSCS
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999998753
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=343.61 Aligned_cols=298 Identities=29% Similarity=0.439 Sum_probs=245.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||++|++.|+++ +++|++++|...... . ....+++++.+|+.|.+ +.+++. + |+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~----~~~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih 68 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRR--E----FVNPSAELHVRDLKDYS-WGAGIK--G-DVVFH 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCG--G----GSCTTSEEECCCTTSTT-TTTTCC--C-SEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCch--h----hcCCCceEEECccccHH-HHhhcC--C-CEEEE
Confidence 58999999999999999999999 689999988643211 1 11457899999999998 777773 3 99999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+......+..++...+++|+.++.+++++|++.+ +++|||+||.++||.....+ .+|+.+..|.+.|+.+|..+
T Consensus 69 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~---~~e~~~~~p~~~Y~~sK~~~ 144 (312)
T 3ko8_A 69 FAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIP---TPEEEPYKPISVYGAAKAAG 144 (312)
T ss_dssp CCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHHHHHH
T ss_pred CCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCC---CCCCCCCCCCChHHHHHHHH
Confidence 999876666778888999999999999999999987 89999999999999876543 36778888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC-CCceeecCCCceEeceeHHHHHHHHHHHHhc----
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG-LPLPIHGDGSNVRSYLYCEDVAEAFECILHK---- 241 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~---- 241 (668)
|.+++.++.+++++++++||++||||+... .++..++..+..+ ..+.+.+++.+.++|+|++|+|++++.++++
T Consensus 145 e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 223 (312)
T 3ko8_A 145 EVMCATYARLFGVRCLAVRYANVVGPRLRH-GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM 223 (312)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCS-SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCEEEEeeccccCcCCCC-ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcccc
Confidence 999999998889999999999999998653 5666677666655 5566778899999999999999999999987
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC------CCCCCcccccChHHHH-hCCCcccCCHHHHHHH
Q 005949 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN------RPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRK 314 (668)
Q Consensus 242 ~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~ 314 (668)
...+++||+++++.+|+.|+++.+.+.+|.++. +...+. .+.......+|++|++ .|||+|+++++++|++
T Consensus 224 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~ 301 (312)
T 3ko8_A 224 DAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPE--IRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKK 301 (312)
T ss_dssp CCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCE--EEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHH
T ss_pred CCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCc--eeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHH
Confidence 456789999999999999999999999998764 222221 2333455789999995 6999999999999999
Q ss_pred HHHHHhhCC
Q 005949 315 TIEWYTQNP 323 (668)
Q Consensus 315 ~~~~~~~~~ 323 (668)
+++|++++.
T Consensus 302 ~~~~~~~~~ 310 (312)
T 3ko8_A 302 TAEDLAKEL 310 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 999998753
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=341.31 Aligned_cols=300 Identities=32% Similarity=0.511 Sum_probs=249.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+||||||+||||+++++.|+++ +++|++++|.... ....+ ..+++++.+|++|.+.+.+++...++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATG-KRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSC-CGGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcC-chhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 48999999999999999999998 6889998874321 11111 1367789999999999999885448999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCc-cccCC-CCCCcCCCCCCCCCCCCCChhHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD-EVYGE-TDEDAVVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~-~vyg~-~~~~~~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
+|+......+..++...+++|+.++.+++++|++.+ +++||++||. .+||. .... +.+|+.+..|.+.|+.+|.
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~---~~~E~~~~~~~~~Y~~sK~ 148 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGE---RAEETWPPRPKSPYAASKA 148 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTC---CBCTTSCCCCCSHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCC---CcCCCCCCCCCChHHHHHH
Confidence 999765444556778899999999999999999876 8999999998 99986 3222 2366777778899999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCCceee-----cCCCceEeceeHHHHHHHHH
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMRGLPLPIH-----GDGSNVRSYLYCEDVAEAFE 236 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~D~a~ai~ 236 (668)
.+|.+++.++++++++++++||++||||+... ..+++.+++.+..+.++.++ +++.+.++|+|++|+|++++
T Consensus 149 ~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 228 (311)
T 2p5y_A 149 AFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHA 228 (311)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHH
Confidence 99999999988889999999999999998644 23577777877788887777 78889999999999999999
Q ss_pred HHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHHHHH
Q 005949 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTI 316 (668)
Q Consensus 237 ~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~ 316 (668)
.+++.+ +++||++++.++|+.|+++.+.+.+|.+.+ +...+.++.......+|++|+++|||+|+++++++|++++
T Consensus 229 ~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~ 304 (311)
T 2p5y_A 229 LALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPE--VQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTV 304 (311)
T ss_dssp HHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHH
T ss_pred HHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCC--ceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHHHH
Confidence 998875 789999999999999999999999998654 3333444444456789999997799999999999999999
Q ss_pred HHHhhC
Q 005949 317 EWYTQN 322 (668)
Q Consensus 317 ~~~~~~ 322 (668)
+|++++
T Consensus 305 ~~~~~~ 310 (311)
T 2p5y_A 305 DHFRGA 310 (311)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 999864
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-41 Score=346.43 Aligned_cols=316 Identities=41% Similarity=0.719 Sum_probs=257.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+||||||+||||++|++.|++++ +++|++++|.........+.......+++++.+|++|.+.+.+++...++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT-QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC-SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcC-CCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 479999999999999999999973 5789999886422222222211123578999999999999999985448999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc--CCCc-------EEEEEcCccccCCCCCCc-------CCCCCCC
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIR-------RFIHVSTDEVYGETDEDA-------VVGNHEA 150 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~-------~~v~~SS~~vyg~~~~~~-------~~~~~e~ 150 (668)
+||......+..++...+++|+.++.+++++|.+. + ++ +||++||.++||...... ....+|+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~ 158 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence 99986644445677889999999999999999987 6 66 999999999998754210 0134677
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
.+..|.+.|+.+|..+|.+++.++.+++++++++||++||||+..+..+++.++..+..+..+.+++++.+.++|+|++|
T Consensus 159 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 238 (361)
T 1kew_A 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHH
Confidence 77788899999999999999999888899999999999999988666778888888888888888888999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCc------ceEeccCCCCCCcccccChHHHHh-CCCc
Q 005949 231 VAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPET------SIKFVENRPFNDQRYFLDDQKLTS-LGWS 303 (668)
Q Consensus 231 ~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~k~~~-lG~~ 303 (668)
+|++++.+++.+..+++||++++.++|+.|+++.+.+.+|.+.+. .+.+.+.++.....+.+|++|+++ |||+
T Consensus 239 va~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (361)
T 1kew_A 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWK 318 (361)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCC
Confidence 999999999887778899999999999999999999999864321 123333344333456789999975 9999
Q ss_pred ccCCHHHHHHHHHHHHhhCCC
Q 005949 304 ERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 304 ~~~~~~~~l~~~~~~~~~~~~ 324 (668)
|+++++++|+++++|++++..
T Consensus 319 p~~~~~e~l~~~~~~~~~~~~ 339 (361)
T 1kew_A 319 PLETFESGIRKTVEWYLANTQ 339 (361)
T ss_dssp CSCCHHHHHHHHHHHHHHCHH
T ss_pred CccCHHHHHHHHHHHHHhccc
Confidence 999999999999999998643
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=341.34 Aligned_cols=305 Identities=28% Similarity=0.444 Sum_probs=248.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
||+|||||||||||++|++.|+++ +++|++++|...... ..+ ..+++++.+|+.|.+.+.+++...++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHE-DAI-----TEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG-GGS-----CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCch-hhc-----CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 469999999999999999999998 688999888542211 111 137889999999999999998545899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+||......+..++...+++|+.++.+++++|++.+ +++||++||.++|+.....+ .+|+++..|.+.|+.+|..
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~---~~E~~~~~~~~~Y~~sK~~ 148 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDL---ITEETMTNPTNTYGETKLA 148 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSS---BCTTSCCCCSSHHHHHHHH
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCC---CCcCCCCCCCChHHHHHHH
Confidence 9999865443456778899999999999999999876 89999999999999765333 3677788888999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHc-CCCceeec------CCCceEeceeHH
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMR-GLPLPIHG------DGSNVRSYLYCE 229 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~v~ 229 (668)
+|.+++.++.+++++++++||++||||+.. ...+++.+.+.... +..+.+++ ++.+.++|+|++
T Consensus 149 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~ 228 (330)
T 2c20_A 149 IEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228 (330)
T ss_dssp HHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHH
T ss_pred HHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHH
Confidence 999999998888999999999999999631 23566666665543 34566665 678899999999
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCccc
Q 005949 230 DVAEAFECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSER 305 (668)
Q Consensus 230 D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~ 305 (668)
|+|++++.+++.+. .+++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++|++ .|||+|+
T Consensus 229 Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 306 (330)
T 2c20_A 229 DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIP--AEVAPRRAGDPARLVASSQKAKEKLGWDPR 306 (330)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCC--EEEECCCSSCCSEECBCCHHHHHHHCCCCS
T ss_pred HHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCc--eeeCCCCCCcccccccCHHHHHHHhCCCCc
Confidence 99999999887642 3689999999999999999999999998654 3333333334456789999997 5999999
Q ss_pred C-CHHHHHHHHHHHHhhCCC
Q 005949 306 T-IWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 306 ~-~~~~~l~~~~~~~~~~~~ 324 (668)
+ +++++|+++++|++++..
T Consensus 307 ~~~l~~~l~~~~~~~~~~~~ 326 (330)
T 2c20_A 307 YVNVKTIIEHAWNWHQKQPN 326 (330)
T ss_dssp CCCHHHHHHHHHHHHHHCSS
T ss_pred cCCHHHHHHHHHHHHHHhhh
Confidence 8 999999999999998764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=345.83 Aligned_cols=297 Identities=29% Similarity=0.427 Sum_probs=249.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc--CCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC--SNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
+++|+|||||||||||++|++.|+++ +++|++++|.... .....+.......+++++.+|+. ++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------~~ 70 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS------------DV 70 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT------------TE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc------------cC
Confidence 45789999999999999999999999 6789999886531 01111111111234555555554 78
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
|+|||+|+.......+.++...++ |+.++.+++++|++.+ +++|||+||..+|+.....+ .+|+.+..|.+.|+.
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~---~~E~~~~~p~~~Y~~ 145 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLP---TPEDSPLSPRSPYAA 145 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHH
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCC---CCCCCCCCCCChhHH
Confidence 999999998776556677777888 9999999999999988 89999999999999875443 377788889999999
Q ss_pred HHHHHHHHHHHHHHhcCC-CEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 162 TKAGAEMLVMAYGRSYGL-PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
+|..+|.+++.++.++++ +++++||+++|||+.....+++.++..+..++++.+++++.+.++|+|++|+|++++.+++
T Consensus 146 sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~ 225 (321)
T 3vps_A 146 SKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN 225 (321)
T ss_dssp HHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh
Confidence 999999999999988899 9999999999999987778899999999999888888999999999999999999999999
Q ss_pred cCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcc-cCCHHHHHHHHHHH
Q 005949 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSE-RTIWEEGLRKTIEW 318 (668)
Q Consensus 241 ~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~-~~~~~~~l~~~~~~ 318 (668)
.+..+ +||+++++.+|+.|+++.+. .+|.+.. +...+..+.......+|++|+++ |||+| +++++++|+++++|
T Consensus 226 ~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~ 301 (321)
T 3vps_A 226 RPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAE--VARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEW 301 (321)
T ss_dssp SCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCE--EEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHH
T ss_pred cCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCc--cccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHH
Confidence 88776 99999999999999999999 9988654 44445555566678899999985 99999 89999999999999
Q ss_pred HhhCC
Q 005949 319 YTQNP 323 (668)
Q Consensus 319 ~~~~~ 323 (668)
|+++.
T Consensus 302 ~~~~~ 306 (321)
T 3vps_A 302 WQSRD 306 (321)
T ss_dssp HHTSC
T ss_pred HHhCC
Confidence 99865
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=348.29 Aligned_cols=304 Identities=28% Similarity=0.488 Sum_probs=245.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCC-CEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPE-YKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
++|+|||||||||||++|++.|+++ + ++|++++|..... ...+. ...+++++.+|+.|.+.+.+++ .++|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~-~~~l~---~~~~v~~~~~Dl~d~~~l~~~~--~~~d~ 102 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAE-KINVP---DHPAVRFSETSITDDALLASLQ--DEYDY 102 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCC-GGGSC---CCTTEEEECSCTTCHHHHHHCC--SCCSE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCc-hhhcc---CCCceEEEECCCCCHHHHHHHh--hCCCE
Confidence 4689999999999999999999998 6 8999998864321 11111 1357899999999999999988 58999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCC--CCC---CC-CCC
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNH--EAS---QL-LPT 156 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~--e~~---~~-~p~ 156 (668)
|||+|+......+..++...+++|+.++.+++++|++. + +++||++||..+||.....+ .+ |+. +. .|.
T Consensus 103 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~---~~~~E~~~~~~~~~~~ 178 (377)
T 2q1s_A 103 VFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDD---AKATEETDIVSLHNND 178 (377)
T ss_dssp EEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC-----------------CCCCCCCSSCCC
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCC---cCcccccccccccCCC
Confidence 99999986654445677889999999999999999987 5 89999999999999765322 24 555 55 778
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC---------CC----CChHHHHHHHHHcCCCceeecCCCceE
Q 005949 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ---------FP----EKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
++|+.+|..+|.+++.++.+++++++++||++||||+. .+ ..+++.++..+..+.++.+++++.+.+
T Consensus 179 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~ 258 (377)
T 2q1s_A 179 SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATR 258 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEE
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEE
Confidence 89999999999999999887899999999999999987 33 467888888888888888788888999
Q ss_pred eceeHHHHHHH-HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCc-ccccChHHHH-hC
Q 005949 224 SYLYCEDVAEA-FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQ-RYFLDDQKLT-SL 300 (668)
Q Consensus 224 ~~i~v~D~a~a-i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~k~~-~l 300 (668)
+|+|++|+|++ ++.+++.+..+ +||+++++++|+.|+++.+.+.+|.+... ...+.++.... ...+|++|++ +|
T Consensus 259 ~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~p~~~~~~~~~~~~d~~k~~~~l 335 (377)
T 2q1s_A 259 DFIFVEDVANGLIACAADGTPGG-VYNIASGKETSIADLATKINEITGNNTEL--DRLPKRPWDNSGKRFGSPEKARREL 335 (377)
T ss_dssp CCEEHHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCC--CCCCCCGGGCC-CCCCCCHHHHHHH
T ss_pred eeEEHHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCc--eeCCCCccccccccccCHHHHHHHc
Confidence 99999999999 99999877655 99999999999999999999999986542 22222333334 6789999996 59
Q ss_pred CCcccCCHHHHHHHHHHHHhhCC
Q 005949 301 GWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 301 G~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
||+|+++++++|+++++||+++.
T Consensus 336 G~~p~~~l~e~l~~~~~~~~~~~ 358 (377)
T 2q1s_A 336 GFSADVSIDDGLRKTIEWTKANL 358 (377)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999998764
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=339.41 Aligned_cols=312 Identities=21% Similarity=0.253 Sum_probs=249.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
++|+|||||||||||++|++.|+++ +++|++++|.........+.......+++++.+|+.|.+.+.+++...++|+|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 4689999999999999999999998 68999998864321111111000124688999999999999999865578999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
||+||......+..++...+++|+.++.+++++|++.+..++||++||.++|+.....+ .+|+++..|.+.|+.+|.
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~---~~E~~~~~p~~~Y~~sK~ 167 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER---QDENTPFYPRSPYGVAKL 167 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHHHH
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCC---CCcccCCCCCChhHHHHH
Confidence 99999876544567788999999999999999999876228999999999999875433 367778888999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCCC-ceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
.+|.+++.++++++++++++||+++|||+..... .+..++..+..+.. ...++++.+.++|+|++|+|++++.+++
T Consensus 168 ~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~ 247 (335)
T 1rpn_A 168 YGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ 247 (335)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHh
Confidence 9999999998888999999999999999864332 24555666666654 3446888999999999999999999998
Q ss_pred cCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEecc--CCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHHH
Q 005949 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVE--NRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIE 317 (668)
Q Consensus 241 ~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~ 317 (668)
++. +++||+++++++|+.|+++.+.+.+|.+....+.+.+ .++.......+|++|++ +|||+|+++++++|+++++
T Consensus 248 ~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~ 326 (335)
T 1rpn_A 248 QDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVE 326 (335)
T ss_dssp SSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHH
T ss_pred cCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHH
Confidence 765 4799999999999999999999999986322222221 23334455678999997 5999999999999999999
Q ss_pred HHhhC
Q 005949 318 WYTQN 322 (668)
Q Consensus 318 ~~~~~ 322 (668)
|++++
T Consensus 327 ~~~~~ 331 (335)
T 1rpn_A 327 ADLRR 331 (335)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99864
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=345.93 Aligned_cols=295 Identities=21% Similarity=0.265 Sum_probs=249.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
.++|+|||||||||||++|++.|+++ +++|++++|.... .+++++.+|+.|.+.+.+++ .++|+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~--~~~d~ 80 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAI--MGVSA 80 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHH--TTCSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHH--hCCCE
Confidence 35689999999999999999999999 6789988886421 46789999999999999999 68999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+|+...... .+....+++|+.++.+++++|++.+ +++|||+||.+|||..... ..+.+|+.+..|.+.|+.+|
T Consensus 81 vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~-~~~~~E~~~~~~~~~Y~~sK 156 (347)
T 4id9_A 81 VLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPE-FLPVTEDHPLCPNSPYGLTK 156 (347)
T ss_dssp EEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCS-SSSBCTTSCCCCCSHHHHHH
T ss_pred EEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCC-CCCcCCCCCCCCCChHHHHH
Confidence 999999765432 3347899999999999999999976 8999999999999984211 12347778888999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCcee-------------CCCCCC-----------CChHHHHHHHHHcCCCceeecCC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVY-------------GPNQFP-----------EKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~-------------G~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
..+|.+++.++++++++++++||+++| ||+... ..+++.++..+..+.++.+++++
T Consensus 157 ~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 236 (347)
T 4id9_A 157 LLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN 236 (347)
T ss_dssp HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC
T ss_pred HHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC
Confidence 999999999998889999999999999 886432 36777888888889888888889
Q ss_pred CceEec----eeHHHHHHHHHHHHhcC-CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccCh
Q 005949 220 SNVRSY----LYCEDVAEAFECILHKG-EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDD 294 (668)
Q Consensus 220 ~~~~~~----i~v~D~a~ai~~~~~~~-~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (668)
.+.++| +|++|+|++++.+++++ ..+++||+++++.+|+.|+++.+.+.+|.+.. +...+..+ ....+|+
T Consensus 237 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~---~~~~~d~ 311 (347)
T 4id9_A 237 ENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIV--TVDFPGDG---VYYHTSN 311 (347)
T ss_dssp TTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE--EEECSSCC---CBCCBCC
T ss_pred CcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCc--eeeCCCcc---cccccCH
Confidence 999999 99999999999999987 56889999999999999999999999998643 22223222 2678999
Q ss_pred HHHHh-CCCcccCCHHHHHHHHHHHHhhCC
Q 005949 295 QKLTS-LGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 295 ~k~~~-lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
+|+++ |||+|+++++++|+++++||+++.
T Consensus 312 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 312 ERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp HHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 99975 999999999999999999999765
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=341.09 Aligned_cols=310 Identities=26% Similarity=0.390 Sum_probs=248.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc--------CCccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC--------SNLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
+|+|||||||||||++|++.|+++ +++|++++|.... .....+. .....+++++.+|+.|.+.+.+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQ-ELTGRSVEFEEMDILDQGALQRLFK 78 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHH-HHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHH-hccCCceEEEECCCCCHHHHHHHHH
Confidence 479999999999999999999998 6788888875321 0000000 0012468899999999999999985
Q ss_pred cCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-C
Q 005949 78 TESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-T 156 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~ 156 (668)
..++|+|||+||.........++...+++|+.++.++++++++.+ +++||++||..+||.....+ .+|+.+..| .
T Consensus 79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~---~~E~~~~~p~~ 154 (348)
T 1ek6_A 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLP---LDEAHPTGGCT 154 (348)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCS
T ss_pred hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCC---cCCCCCCCCCC
Confidence 458999999999865443456778899999999999999999876 89999999999999764333 367777677 7
Q ss_pred ChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCC------C----CCChHHHHHHHHH-cCCCceeec------C
Q 005949 157 NPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQ------F----PEKLIPKFILLAM-RGLPLPIHG------D 218 (668)
Q Consensus 157 ~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~------~ 218 (668)
+.|+.+|..+|.+++.++.+ .+++++++||+++|||+. . ...+++.+...+. .+..+.+++ +
T Consensus 155 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 234 (348)
T 1ek6_A 155 NPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTED 234 (348)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred CchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCC
Confidence 89999999999999998876 239999999999999952 1 2357777777776 566677665 6
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC--CCC-ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChH
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG--EVG-HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQ 295 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~--~~~-~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (668)
+.+.++|+|++|+|++++.+++.+ ..+ ++||+++++++|+.|+++.+.+.+|.+.+ +...+..+.......+|++
T Consensus 235 g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~ 312 (348)
T 1ek6_A 235 GTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YKVVARREGDVAACYANPS 312 (348)
T ss_dssp SSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCH
T ss_pred CceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCc--eeeCCCCCccchhhccCHH
Confidence 788999999999999999998764 344 79999999999999999999999998654 3333333434456789999
Q ss_pred HHH-hCCCcccCCHHHHHHHHHHHHhhCCC
Q 005949 296 KLT-SLGWSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 296 k~~-~lG~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
|++ +|||+|+++++++|+++++||+++..
T Consensus 313 k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~ 342 (348)
T 1ek6_A 313 LAQEELGWTAALGLDRMCEDLWRWQKQNPS 342 (348)
T ss_dssp HHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHhccc
Confidence 996 59999999999999999999998754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=339.17 Aligned_cols=293 Identities=23% Similarity=0.379 Sum_probs=241.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|++|+|||||||||||++|++.|+++ +++|++++|.. .+|+.|.+.+.+++...++|+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~~~d~ 58 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQ 58 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCc--------------------cCCccCHHHHHHHHHhcCCCE
Confidence 34579999999999999999999998 67888877631 379999999999985448999
Q ss_pred EEEcCccCCc-ccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC----CCCCC-C
Q 005949 84 IMHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS----QLLPT-N 157 (668)
Q Consensus 84 Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~----~~~p~-~ 157 (668)
|||+|+.... .....++...+++|+.++.+++++|++.+ +++|||+||..+||.....+. +|++ +..|. +
T Consensus 59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~~~~~p~~~ 134 (321)
T 1e6u_A 59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPM---AESELLQGTLEPTNE 134 (321)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSB---CGGGTTSSCCCGGGH
T ss_pred EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCc---CccccccCCCCCCCC
Confidence 9999997642 22345677899999999999999999976 899999999999997654332 4544 44454 5
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHc----C-CCceeecCCCceEeceeH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMR----G-LPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v 228 (668)
.|+.+|..+|.+++.++++++++++++||++||||+... ..+++.++..+.. | .++.+++++.+.++|+|+
T Consensus 135 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v 214 (321)
T 1e6u_A 135 PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV 214 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEH
Confidence 899999999999999988789999999999999998753 2577777777654 3 567777889999999999
Q ss_pred HHHHHHHHHHHhcCCC---------CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh
Q 005949 229 EDVAEAFECILHKGEV---------GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS 299 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~~---------~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 299 (668)
+|+|++++.+++++.. +++||+++++++|+.|+++.+.+.+|.+.. +.+.+.++.......+|++|+++
T Consensus 215 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~ 292 (321)
T 1e6u_A 215 DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPDGTPRKLLDVTRLHQ 292 (321)
T ss_dssp HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE--EEEETTSCCCCSBCCBCCHHHHH
T ss_pred HHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCc--eEeCCCCCCCcccccCCHHHHHh
Confidence 9999999999987653 589999999999999999999999998653 33444444455567899999977
Q ss_pred CCCcccCCHHHHHHHHHHHHhhCCC
Q 005949 300 LGWSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 300 lG~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
|||+|+++++++|+++++||+++.+
T Consensus 293 lG~~p~~~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 293 LGWYHEISLEAGLASTYQWFLENQD 317 (321)
T ss_dssp TTCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred cCCccCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998653
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=340.89 Aligned_cols=311 Identities=27% Similarity=0.429 Sum_probs=247.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC---ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
||+|||||||||||++|++.|+++ +++|++++|...... ...+. ...+++++.+|+.|.+.+.+++...++|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLS---SLGNFEFVHGDIRNKNDVTRLITKYMPD 75 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhc---cCCceEEEEcCCCCHHHHHHHHhccCCC
Confidence 368999999999999999999998 688999887421111 11111 1235889999999999999998544599
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCc-EEEEEcCccccCCCCCCcC-------------CCCC
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-RFIHVSTDEVYGETDEDAV-------------VGNH 148 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~vyg~~~~~~~-------------~~~~ 148 (668)
+|||+||......+..++...+++|+.++.+++++|++.+ ++ +||++||.++|+.....+. ...+
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~ 154 (347)
T 1orr_A 76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 154 (347)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcc
Confidence 9999999866544456778899999999999999999987 54 9999999999997543221 1135
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCC-----CceeecCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMRGL-----PLPIHGDGS 220 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~ 220 (668)
|+.+..|.+.|+.+|..+|.+++.++.+++++++++||++||||+... ..+++.++..+..+. ++.+++++.
T Consensus 155 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 234 (347)
T 1orr_A 155 ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK 234 (347)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSC
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCc
Confidence 566667888999999999999999988889999999999999997643 245666766665554 677788899
Q ss_pred ceEeceeHHHHHHHHHHHHhc--CCCCceEEEcCCC--cccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHH
Q 005949 221 NVRSYLYCEDVAEAFECILHK--GEVGHVYNVGTKK--ERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~--~~~~~~~ni~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 296 (668)
+.++|+|++|+|++++.+++. ...+++||++++. ++|+.|+++.+.+.+|.+.. +...+.++.......+|++|
T Consensus 235 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k 312 (347)
T 1orr_A 235 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVRESDQRVFVADIKK 312 (347)
T ss_dssp CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC--EEEECCCSSCCSEECBCCHH
T ss_pred ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCC--ceeCCCCCCCcceeecCHHH
Confidence 999999999999999999875 2357799999886 49999999999999998654 33334444444557899999
Q ss_pred HH-hCCCcccCCHHHHHHHHHHHHhhCCC
Q 005949 297 LT-SLGWSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 297 ~~-~lG~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
++ .|||+|+++++++|+++++|++++.+
T Consensus 313 ~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 313 ITNAIDWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp HHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred HHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence 96 59999999999999999999998764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=337.04 Aligned_cols=312 Identities=21% Similarity=0.324 Sum_probs=248.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
|++|+|||||||||||++|++.|+++ +++|++++|..... ..+.. .....+++++.+|+.|.+.+.+++...++|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTV--PSLFETARVADGMQSEIGDIRDQNKLLESIREFQPE 82 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSS--SCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCccc--chhhHhhccCCceEEEEccccCHHHHHHHHHhcCCC
Confidence 45689999999999999999999998 67899998864321 11100 001347899999999999999998544699
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|||+||......+..++...+++|+.++.+++++|.+.+.+++||++||..+||...... +.+|+.+..|.+.|+.+
T Consensus 83 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~--~~~E~~~~~~~~~Y~~s 160 (357)
T 1rkx_A 83 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIW--GYRENEAMGGYDPYSNS 160 (357)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSS--CBCTTSCBCCSSHHHHH
T ss_pred EEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCC--CCCCCCCCCCCCccHHH
Confidence 9999999755444456778899999999999999999876578999999999999865421 23566677788999999
Q ss_pred HHHHHHHHHHHHHhc---------CCCEEEEeeCceeCCCCCC-CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 163 KAGAEMLVMAYGRSY---------GLPVITTRGNNVYGPNQFP-EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 163 K~~~E~~~~~~~~~~---------~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
|..+|.+++.++.++ +++++++||++||||+... ..+++.+++.+..+..+.+ .++.+.++|+|++|+|
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva 239 (357)
T 1rkx_A 161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPL 239 (357)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHH
Confidence 999999999987654 8999999999999998743 3688888888888887665 4567899999999999
Q ss_pred HHHHHHHhc-----CCCCceEEEcCC--CcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcc
Q 005949 233 EAFECILHK-----GEVGHVYNVGTK--KERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSE 304 (668)
Q Consensus 233 ~ai~~~~~~-----~~~~~~~ni~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~ 304 (668)
++++.+++. ...+++||++++ +++|+.|+++.+.+.+|.+........ .++.......+|++|+++ |||+|
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~d~~k~~~~lG~~p 318 (357)
T 1rkx_A 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN-AHPHEAHYLKLDCSKAKMQLGWHP 318 (357)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHHHHHCCCC
T ss_pred HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCC-CCCcCcccccCCHHHHHHHhCCCc
Confidence 999988874 245789999974 589999999999999998654222111 123334557899999974 99999
Q ss_pred cCCHHHHHHHHHHHHhhCC
Q 005949 305 RTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~ 323 (668)
+++++++|+++++||+++.
T Consensus 319 ~~~l~e~l~~~~~~~~~~~ 337 (357)
T 1rkx_A 319 RWNLNTTLEYIVGWHKNWL 337 (357)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHh
Confidence 9999999999999998753
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=338.72 Aligned_cols=316 Identities=23% Similarity=0.348 Sum_probs=247.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHH-HhCCCCEEEEEcCCCccCC-------ccccC---CCc-C---CCC---eEEEEccCC
Q 005949 6 PKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSN-------LKNLI---PSK-A---SSN---FKFVKGDIA 67 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~-~~g~~~~v~~~~r~~~~~~-------~~~~~---~~~-~---~~~---~~~~~~Dl~ 67 (668)
+|+|||||||||||++|++.|+ ++ +++|++++|...... ...+. ... . ..+ ++++.+|+.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 3599999999999999999999 88 688999888643210 01110 000 0 124 889999999
Q ss_pred CHHHHHHHhccCC-CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC----
Q 005949 68 SADLVNFLLITES-IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED---- 142 (668)
Q Consensus 68 d~~~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~---- 142 (668)
|.+.+.+++...+ +|+|||+||......+..++...+++|+.++.+++++|++.+ +++||++||.++|+.....
T Consensus 80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~ 158 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVST 158 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----
T ss_pred CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccc
Confidence 9999999886546 999999999876443456778899999999999999999876 8999999999999876510
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCC---------CCChHHHHH----HHHHc
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQF---------PEKLIPKFI----LLAMR 209 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~---------~~~~~~~~~----~~~~~ 209 (668)
...+.+|+++..|.+.|+.+|..+|.+++.++.+++++++++||++||||+.. ...+++.++ ..+..
T Consensus 159 ~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 01234677777888999999999999999998888999999999999999631 245666655 23334
Q ss_pred CC------------Cceeec------CCCceEeceeHHHHHHHHHHHHhcCC-C-----C---ceEEEcCCCcccHHHHH
Q 005949 210 GL------------PLPIHG------DGSNVRSYLYCEDVAEAFECILHKGE-V-----G---HVYNVGTKKERRVIDVA 262 (668)
Q Consensus 210 ~~------------~~~~~~------~~~~~~~~i~v~D~a~ai~~~~~~~~-~-----~---~~~ni~~~~~~s~~el~ 262 (668)
+. .+.+++ ++.+.++|+|++|+|++++.+++.+. . + ++||+++++++|+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 43 456665 67899999999999999999887642 2 3 79999999999999999
Q ss_pred HHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccC-CHHHHHHHHHHHHhhCCCcc
Q 005949 263 KDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERT-IWEEGLRKTIEWYTQNPDWW 326 (668)
Q Consensus 263 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~-~~~~~l~~~~~~~~~~~~~~ 326 (668)
+.+.+.+|.+.+ +...+..+.......+|++|++ .|||+|++ +++++|+++++||+++...+
T Consensus 319 ~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~~~ 382 (397)
T 1gy8_A 319 EVARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGY 382 (397)
T ss_dssp HHHHHHHCCCCC--EEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTT
T ss_pred HHHHHHhCCCCC--eeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhccccc
Confidence 999999998654 3333333444456789999996 59999998 99999999999999876533
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-40 Score=328.39 Aligned_cols=278 Identities=22% Similarity=0.257 Sum_probs=238.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|+++ +++|++++|. .+|+.|.+.+.+++...++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE--EYDIYPFDKK---------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTT---------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCEEEEeccc---------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 49999999999999999999998 7899999882 389999999999986558999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+......++.++...+++|+.++.+++++|++.+ + +|||+||..+|+.....+ .+|+++..|.++|+.+|..+
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~---~~E~~~~~p~~~Y~~sK~~~ 137 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEG---YDEFHNPAPINIYGASKYAG 137 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSC---BCTTSCCCCCSHHHHHHHHH
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCC---CCCCCCCCCCCHHHHHHHHH
Confidence 999987666667889999999999999999999987 5 799999999998876443 37888888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCc
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 246 (668)
|.+++.++ .+++++||++||||+. ..+++.++..+..+.++.+.++ +.++|+|++|+|++++.+++++. ++
T Consensus 138 E~~~~~~~----~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~-~~ 208 (287)
T 3sc6_A 138 EQFVKELH----NKYFIVRTSWLYGKYG--NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL-YG 208 (287)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSS--CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC-CE
T ss_pred HHHHHHhC----CCcEEEeeeeecCCCC--CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC-CC
Confidence 99998774 4689999999999975 4688888888888887777654 88999999999999999999877 78
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec---cCCCCCCcccccChHHHHhCCCcccCCHHHHHHHHHHHHhh
Q 005949 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV---ENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 247 ~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
+||+++++.+|+.|+++.+++.+|.+........ +..........+|++|+++|||.|.++++++|+++++|+++
T Consensus 209 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 209 TYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp EEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred eEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 9999999999999999999999998754221111 22223335578999999999999999999999999999865
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=329.67 Aligned_cols=302 Identities=28% Similarity=0.464 Sum_probs=243.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
.+++|+|||||||||||++|++.|+++ +++|++++|...... ..+.......++.++.+|+.+.. + .++|
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~-----~--~~~d 93 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRK-RNVEHWIGHENFELINHDVVEPL-----Y--IEVD 93 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG-GGTGGGTTCTTEEEEECCTTSCC-----C--CCCS
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccch-hhhhhhccCCceEEEeCccCChh-----h--cCCC
Confidence 356789999999999999999999998 688999988532111 11111112357899999998863 3 5799
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC-----CCCCCCC
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA-----SQLLPTN 157 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~-----~~~~p~~ 157 (668)
+|||+|+.........++...+++|+.++.+++++|++.+ + +||++||..+||.....+. +|+ .+..|.+
T Consensus 94 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~---~E~~~~~~~~~~~~~ 168 (343)
T 2b69_A 94 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQ---SEDYWGHVNPIGPRA 168 (343)
T ss_dssp EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSB---CTTCCCBCCSSSTTH
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCC---cccccccCCCCCCCC
Confidence 9999999866444456778899999999999999999987 4 9999999999987653332 333 3555677
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
.|+.+|..+|.+++.++++++++++++||++||||+..+ ..+++.++..+..++.+.+++++.+.++|+|++|+|+++
T Consensus 169 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 248 (343)
T 2b69_A 169 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence 899999999999999888889999999999999998643 357778888888888888888899999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRK 314 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~ 314 (668)
+.+++.+. +++||+++++++|+.|+++.+.+.+|.+.. +...+..........+|++|++ .|||+|+++++++|++
T Consensus 249 ~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~ 325 (343)
T 2b69_A 249 VALMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNK 325 (343)
T ss_dssp HHHHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred HHHHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCCCCC--ceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHH
Confidence 99988653 679999999999999999999999998754 3333333333445678999997 5999999999999999
Q ss_pred HHHHHhhC
Q 005949 315 TIEWYTQN 322 (668)
Q Consensus 315 ~~~~~~~~ 322 (668)
+++|++++
T Consensus 326 ~~~~~~~~ 333 (343)
T 2b69_A 326 AIHYFRKE 333 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999865
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=329.23 Aligned_cols=309 Identities=28% Similarity=0.461 Sum_probs=241.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
|+|||||||||||+++++.|+++ +++|+++++...... ...+. .....++.++.+|++|.+.+.+++...++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v 77 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHDHAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHH-hhcCCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence 48999999999999999999999 678888876432111 10000 00123578899999999999998865579999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-CChhHHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSATK 163 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~sK 163 (668)
||+||.........++.+.+++|+.++.++++++++.+ +++||++||.++||.....+ .+|+.+..| .+.|+.+|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~---~~e~~~~~~~~~~Y~~sK 153 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIP---YVESFPTGTPQSPYGKSK 153 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSS---BCTTSCCCCCSSHHHHHH
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCC---cCcccCCCCCCChHHHHH
Confidence 99999765433445677889999999999999999876 88999999999998764332 256555544 78999999
Q ss_pred HHHHHHHHHHHHhc-CCCEEEEeeCceeCCCC------C----CCChHHHHHHHHH-cCCCceeec------CCCceEec
Q 005949 164 AGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQ------F----PEKLIPKFILLAM-RGLPLPIHG------DGSNVRSY 225 (668)
Q Consensus 164 ~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~ 225 (668)
..+|.+++.++.++ +++++++||+++|||.. . ...+++.+..... .+..+.+++ +|.+.++|
T Consensus 154 ~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 233 (338)
T 1udb_A 154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233 (338)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECE
T ss_pred HHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeee
Confidence 99999999988776 89999999999999842 1 2346666666655 344555544 56789999
Q ss_pred eeHHHHHHHHHHHHhcC--CC-CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCC
Q 005949 226 LYCEDVAEAFECILHKG--EV-GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLG 301 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~--~~-~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG 301 (668)
+|++|+|++++.+++.. .. +++||+++++++|+.|+++.+.+.+|.+.+ +...+.++.......+|++|++ .||
T Consensus 234 i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lG 311 (338)
T 1udb_A 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELN 311 (338)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCC--EEEECCCTTCCSBCCBCCHHHHHHHC
T ss_pred EEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCc--ceeCCCCCCchhhhhcCHHHHHHHcC
Confidence 99999999999988753 23 369999999999999999999999997644 3333334434455778999996 599
Q ss_pred CcccCCHHHHHHHHHHHHhhCCC
Q 005949 302 WSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 302 ~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
|+|+++++++|+++++|++++..
T Consensus 312 ~~p~~~l~~~l~~~~~w~~~~~~ 334 (338)
T 1udb_A 312 WRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTT
T ss_pred CCcCCCHHHHHHHHHHHHHhccc
Confidence 99999999999999999998753
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-39 Score=332.57 Aligned_cols=304 Identities=23% Similarity=0.307 Sum_probs=247.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
+||+|||||||||||++|++.|+++ +++|++++|...... . ....+++++.+|+.|.+.+.+++ .++|+|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~----~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~V 97 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHM--T----EDMFCDEFHLVDLRVMENCLKVT--EGVDHV 97 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSS--C----GGGTCSEEEECCTTSHHHHHHHH--TTCSEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccch--h----hccCCceEEECCCCCHHHHHHHh--CCCCEE
Confidence 4689999999999999999999999 688999988643211 1 11246889999999999999998 689999
Q ss_pred EEcCccCCccc-ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcC--CCCCCCC--CCCCCChh
Q 005949 85 MHFAAQTHVDN-SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAV--VGNHEAS--QLLPTNPY 159 (668)
Q Consensus 85 ih~a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~--~~~~e~~--~~~p~~~Y 159 (668)
||+|+...... ...++...+++|+.++.+++++|++.+ +++||++||.++|+....... ...+|++ +..|.+.|
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y 176 (379)
T 2c5a_A 98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 176 (379)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChh
Confidence 99999764321 146778899999999999999999876 899999999999986542110 1124444 56678899
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCC-ceeecCCCceEeceeHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a 234 (668)
+.+|..+|.+++.++++++++++++||++||||+.... .+++.+++.+..+.+ +.+++++.+.++|+|++|+|++
T Consensus 177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (379)
T 2c5a_A 177 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHH
Confidence 99999999999999888899999999999999976432 367778887777765 7778888999999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHH
Q 005949 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLR 313 (668)
Q Consensus 235 i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~ 313 (668)
++.+++.+ .+++||+++++.+|+.|+++.+.+.+|.+.. +...+. +.......+|++|++ .|||+|+++++++|+
T Consensus 257 i~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~p~-~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~ 332 (379)
T 2c5a_A 257 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLR 332 (379)
T ss_dssp HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCC--EEEECC-CCCCSBCEECCHHHHHHHSCCCCCCHHHHHH
T ss_pred HHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCc--eeeCCC-CCCcccccCCHHHHHHHhCCCCCCCHHHHHH
Confidence 99999876 5689999999999999999999999998654 222222 122344678999997 499999999999999
Q ss_pred HHHHHHhhCC
Q 005949 314 KTIEWYTQNP 323 (668)
Q Consensus 314 ~~~~~~~~~~ 323 (668)
++++||+++.
T Consensus 333 ~~~~~~~~~~ 342 (379)
T 2c5a_A 333 ITYFWIKEQI 342 (379)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhH
Confidence 9999998754
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=337.90 Aligned_cols=311 Identities=21% Similarity=0.283 Sum_probs=245.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--------cc-------ccCC--CcCCCCeEEEEccCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--------LK-------NLIP--SKASSNFKFVKGDIA 67 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--------~~-------~~~~--~~~~~~~~~~~~Dl~ 67 (668)
.+++|||||||||||++|++.|+++ +++|++++|...... +. .+.. .....+++++.+|++
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 4789999999999999999999999 688999887532100 00 0000 001346889999999
Q ss_pred CHHHHHHHhccCCCCEEEEcCccCCcccccCChH---HHHHHHHHHHHHHHHHHHHcCCC-cEEEEEcCccccCCCCCCc
Q 005949 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSF---EFTKNNIYGTHVLLEACKVTGQI-RRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 68 d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~---~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~SS~~vyg~~~~~~ 143 (668)
|.+.+.+++...++|+|||+||.........++. ..+++|+.|+.+++++|++.+ + ++||++||.++||.....
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~- 165 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNID- 165 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSC-
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCC-
Confidence 9999999885446999999999865443344443 478999999999999999877 5 599999999999976522
Q ss_pred CCCCCCC--------------CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-------------
Q 005949 144 VVGNHEA--------------SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP------------- 196 (668)
Q Consensus 144 ~~~~~e~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~------------- 196 (668)
.+|+ .+..|.++|+.+|..+|.+++.++.+++++++++||++||||+..+
T Consensus 166 ---~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~ 242 (404)
T 1i24_A 166 ---IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDY 242 (404)
T ss_dssp ---BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCC
T ss_pred ---CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccc
Confidence 1232 3566788999999999999999888889999999999999998642
Q ss_pred ----CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC-C--ceEEEcCCCcccHHHHHHHHHHH-
Q 005949 197 ----EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV-G--HVYNVGTKKERRVIDVAKDICKL- 268 (668)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~-~--~~~ni~~~~~~s~~el~~~i~~~- 268 (668)
..+++.++..+..++++.+++++.+.++|+|++|+|++++.+++.+.. + ++||+++ .++|+.|+++.+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~ 321 (404)
T 1i24_A 243 DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAG 321 (404)
T ss_dssp STTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHH
Confidence 357888888888888888889999999999999999999999987653 5 6999998 889999999999998
Q ss_pred --hCCCCCcceEeccCCCC--CCcccccChHHHHhCCCcccCCHHHHHHHHHHHHhhCCCc
Q 005949 269 --FSMDPETSIKFVENRPF--NDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNPDW 325 (668)
Q Consensus 269 --~g~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~~~~~ 325 (668)
+|.+.. +...+.... ....+.+|++|+++|||+|+.+++++++++++|++...+.
T Consensus 322 ~~~g~~~~--~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~~~~ 380 (404)
T 1i24_A 322 SKLGLDVK--KMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKDR 380 (404)
T ss_dssp HTTTCCCC--EEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred HhhCCCcc--ccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhhhhc
Confidence 776543 222222221 2234568999999999999999999999999999876643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=333.89 Aligned_cols=300 Identities=21% Similarity=0.274 Sum_probs=242.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC---C
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE---S 80 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~ 80 (668)
+++|+|||||||||||++|++.|+++| .++|++++|.........+ .++. +.+|+.|.+.+..+++.. +
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~------~~~~-~~~d~~~~~~~~~~~~~~~~~~ 115 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTKFVNL------VDLN-IADYMDKEDFLIQIMAGEEFGD 115 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECCSSGGGGGGT------TTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecCCCcchhhcc------cCce-EeeecCcHHHHHHHHhhcccCC
Confidence 456899999999999999999999993 1788888886432211111 1233 678999999998888421 6
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|+|||+||.... ...++.+.+++|+.++.+++++|++.+ + +||++||..+|+.....+ .+|+.+..|.+.|+
T Consensus 116 ~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~---~~E~~~~~p~~~Y~ 188 (357)
T 2x6t_A 116 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDF---IESREYEKPLNVFG 188 (357)
T ss_dssp CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCC---CSSGGGCCCSSHHH
T ss_pred CCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCC---cCCcCCCCCCChhH
Confidence 9999999997654 346778899999999999999999987 6 999999999998765433 36777788889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceeecCCCc-eEeceeHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSN-VRSYLYCEDVAEAF 235 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~ai 235 (668)
.+|..+|.+++.++.+++++++++||++||||+..+ ..+++.++..+..+..+.+++++.+ .++|+|++|+|+++
T Consensus 189 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai 268 (357)
T 2x6t_A 189 YSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN 268 (357)
T ss_dssp HHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHH
Confidence 999999999999988889999999999999998643 3677888888888888888888888 99999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCC----CCCcccccChHHHHhCCC-cccCCHHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP----FNDQRYFLDDQKLTSLGW-SERTIWEE 310 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~k~~~lG~-~~~~~~~~ 310 (668)
+.+++.+. +++||+++++.+|+.|+++.+.+.+|.+ . +.+.+... .......+|++|+++||| .|.+++++
T Consensus 269 ~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e 344 (357)
T 2x6t_A 269 LWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-Q--IEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAE 344 (357)
T ss_dssp HHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC-C--CEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHH
T ss_pred HHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC-C--ceecCCCcccccccccccccCHHHHHHcCCCCCCCCHHH
Confidence 99998876 8899999999999999999999999986 2 22222111 112345789999999999 78899999
Q ss_pred HHHHHHHHHhhC
Q 005949 311 GLRKTIEWYTQN 322 (668)
Q Consensus 311 ~l~~~~~~~~~~ 322 (668)
+|+++++||+++
T Consensus 345 ~l~~~~~~~~~~ 356 (357)
T 2x6t_A 345 GVTEYMAWLNRD 356 (357)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHhhc
Confidence 999999999753
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=332.00 Aligned_cols=311 Identities=21% Similarity=0.241 Sum_probs=245.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC---CccccCCCc---CCCCeEEEEccCCCHHHHHHHhccC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS---NLKNLIPSK---ASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
+|+|||||||||||++|++.|+++ +++|++++|..... .+..+.... ...+++++.+|+.|.+.+.+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 379999999999999999999998 68899988864321 111111100 2346889999999999999988655
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCC---cEEEEEcCccccCCCCCCcCCCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI---RRFIHVSTDEVYGETDEDAVVGNHEASQLLPT 156 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~ 156 (668)
++|+|||+||......+..++...+++|+.++.+++++|.+.+ + ++||++||..+|+.....+ .+|+++..|.
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~---~~E~~~~~~~ 177 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIP---QKETTPFYPR 177 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSS---BCTTSCCCCC
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCC---CCccCCCCCC
Confidence 7899999999866544456778899999999999999999876 5 7999999999999765433 3677777888
Q ss_pred ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHHcCC-CceeecCCCceEeceeHHHHH
Q 005949 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMRGL-PLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 157 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a 232 (668)
+.|+.+|..+|.+++.++.+++++++++|++.+|||+...... +..++..+..+. ....++++.+.++|+|++|+|
T Consensus 178 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 257 (375)
T 1t2a_A 178 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV 257 (375)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHH
Confidence 9999999999999999988889999999999999997643322 344555555564 334568888999999999999
Q ss_pred HHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-----------------eEecc--CCCCCCcccccC
Q 005949 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS-----------------IKFVE--NRPFNDQRYFLD 293 (668)
Q Consensus 233 ~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~-----------------~~~~~--~~~~~~~~~~~~ 293 (668)
++++.+++++. +++||+++++++|+.|+++.+.+.+|.+.... ....+ .++.......+|
T Consensus 258 ~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 336 (375)
T 1t2a_A 258 EAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGD 336 (375)
T ss_dssp HHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBC
T ss_pred HHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCC
Confidence 99999998765 47999999999999999999999999763211 11111 123334456789
Q ss_pred hHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 294 DQKLT-SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 294 ~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
++|++ +|||+|+++++++|+++++|+++..
T Consensus 337 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 337 CTKAKQKLNWKPRVAFDELVREMVHADVELM 367 (375)
T ss_dssp CHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence 99997 5999999999999999999998754
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-39 Score=329.18 Aligned_cols=313 Identities=21% Similarity=0.247 Sum_probs=247.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|++|+|||||||||||+++++.|+++ +++|++++|.........+.......+++++.+|+.|.+.+.+++...++|+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence 34679999999999999999999998 6899999986532111111111112468899999999999999886557899
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI-RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
|||+||......+..++...+++|+.++.+++++|.+.+ + ++||++||.++||.....+ .+|+.+..|.++|+.+
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~---~~e~~~~~~~~~Y~~s 154 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIP---QTEKTPFYPRSPYAVA 154 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSS---BCTTSCCCCCSHHHHH
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCC---CCccCCCCCCChhHHH
Confidence 999999876554567788999999999999999999876 5 8999999999999876433 3677777888999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHHcCCC-ceeecCCCceEeceeHHHHHHHHHHH
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAEAFECI 238 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~ai~~~ 238 (668)
|..+|.+++.++.+++++++++|+.++|||+.....+ +..++..+..+.. ....+++.+.++|+|++|+|++++.+
T Consensus 155 K~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~ 234 (345)
T 2z1m_A 155 KLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLM 234 (345)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHH
Confidence 9999999999988889999999999999998754433 2334444555643 33567788899999999999999999
Q ss_pred HhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-----------------eEecc--CCCCCCcccccChHHHH-
Q 005949 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS-----------------IKFVE--NRPFNDQRYFLDDQKLT- 298 (668)
Q Consensus 239 ~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~-----------------~~~~~--~~~~~~~~~~~~~~k~~- 298 (668)
++++. +++||+++++.+|+.|+++.+.+.+|.+.... ....+ .++.......+|++|++
T Consensus 235 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (345)
T 2z1m_A 235 MQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMK 313 (345)
T ss_dssp HTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred HhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHH
Confidence 98765 47999999999999999999999999863211 11111 12333345678999997
Q ss_pred hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 299 SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 299 ~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
.|||+|+++++++|+++++|++++.
T Consensus 314 ~lG~~p~~~~~~~l~~~~~~~~~~~ 338 (345)
T 2z1m_A 314 KLGWKPRTTFDELVEIMMEADLKRV 338 (345)
T ss_dssp HHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred HcCCcccCCHHHHHHHHHHHHHHHh
Confidence 5999999999999999999998754
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=328.70 Aligned_cols=309 Identities=21% Similarity=0.244 Sum_probs=245.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC---ccccCCCc--CCC-CeEEEEccCCCHHHHHHHhccCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIPSK--ASS-NFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~~~--~~~-~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
|+|||||||||||++|++.|+++ +++|++++|...... +..+.... ... +++++.+|+.|.+.+.+++...+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred CeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence 69999999999999999999998 688999988653211 11111100 012 78899999999999999886557
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCc-----EEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-----RFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
+|+|||+||......++.++...+++|+.++.+++++|.+.+ ++ +||++||.++||.... +.+|+.+..|
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~----~~~E~~~~~~ 181 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPP----PQSETTPFHP 181 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCS----SBCTTSCCCC
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCC----CCCCCCCCCC
Confidence 899999999876544456788899999999999999999865 55 9999999999998764 2367777888
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCCC-ceeecCCCceEeceeHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~ 231 (668)
.+.|+.+|..+|.+++.++.+++++++++|++++|||+..... .+..++..+..+.. ...++++.+.++|+|++|+
T Consensus 182 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dv 261 (381)
T 1n7h_A 182 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 261 (381)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHH
Confidence 8999999999999999998888999999999999999864332 23444555555543 3346788899999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEecc--CCCCCCcccccChHHHHh-CCCcccCCH
Q 005949 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVE--NRPFNDQRYFLDDQKLTS-LGWSERTIW 308 (668)
Q Consensus 232 a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~k~~~-lG~~~~~~~ 308 (668)
|++++.+++.+. +++||+++++.+|+.|+++.+.+.+|.+....+.+.+ .++.......+|++|+++ |||+|++++
T Consensus 262 a~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l 340 (381)
T 1n7h_A 262 VEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF 340 (381)
T ss_dssp HHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred HHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCH
Confidence 999999998765 4799999999999999999999999975322223222 233344556789999975 999999999
Q ss_pred HHHHHHHHHHHhhCC
Q 005949 309 EEGLRKTIEWYTQNP 323 (668)
Q Consensus 309 ~~~l~~~~~~~~~~~ 323 (668)
+++|+++++||+++.
T Consensus 341 ~e~l~~~~~~~~~~~ 355 (381)
T 1n7h_A 341 EKLVKMMVDEDLELA 355 (381)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998764
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=329.19 Aligned_cols=311 Identities=21% Similarity=0.271 Sum_probs=243.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC---CccccCCCc--CCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS---NLKNLIPSK--ASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
||+|||||||||||+++++.|+++ +++|++++|..... .+..+.... ...+++++.+|++|.+.+.+++...+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 478999999999999999999999 68999998864321 111111000 12468899999999999999886557
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCC---cEEEEEcCccccCCCCCCcCCCCCCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI---RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 157 (668)
+|+|||+||......+..++...+++|+.++.++++++++.+ + ++||++||..+|+.....+ .+|+.+..|.+
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~---~~E~~~~~~~~ 154 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIP---QKETTPFYPRS 154 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSS---BCTTSCCCCCS
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCC---CCccCCCCCCC
Confidence 899999999876555667788899999999999999999876 6 7999999999999765332 36777778889
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCCC-ceeecCCCceEeceeHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMRGLP-LPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~ 233 (668)
.|+.+|..+|.+++.++.+++++++++|++.+|||+..... .+..++..+..+.. ....+++.+.++|+|++|+|+
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 234 (372)
T 1db3_A 155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK 234 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence 99999999999999998888999999999999999864332 24455556666653 445688899999999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc---------------------------eEecc--CCC
Q 005949 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS---------------------------IKFVE--NRP 284 (668)
Q Consensus 234 ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~---------------------------~~~~~--~~~ 284 (668)
+++.+++++. +++||+++++++|+.|+++.+.+.+|.+.... ..+.+ .++
T Consensus 235 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
T 1db3_A 235 MQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP 313 (372)
T ss_dssp HHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCC
T ss_pred HHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCC
Confidence 9999998765 47999999999999999999999998753210 00111 123
Q ss_pred CCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 285 FNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 285 ~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
.......+|++|++ +|||+|+++++|+|+++++||+++.
T Consensus 314 ~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 353 (372)
T 1db3_A 314 AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA 353 (372)
T ss_dssp CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhh
Confidence 33345678999997 5999999999999999999998764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=326.26 Aligned_cols=304 Identities=22% Similarity=0.350 Sum_probs=240.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCC-HHHHHHHhccCCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS-ADLVNFLLITESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~Vi 85 (668)
|+|||||||||||+++++.|++++ +++|++++|.... ...+ ....+++++.+|+.| .+.+.+++ .++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~--~~~~---~~~~~~~~~~~D~~~~~~~~~~~~--~~~d~vi 72 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDA--ISRF---LNHPHFHFVEGDISIHSEWIEYHV--KKCDVVL 72 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGG--GGGG---TTCTTEEEEECCTTTCSHHHHHHH--HHCSEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeCCcch--HHHh---hcCCCeEEEeccccCcHHHHHhhc--cCCCEEE
Confidence 589999999999999999999973 5789999886422 1111 123578999999998 45677777 4799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC-------CCCCh
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL-------LPTNP 158 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------~p~~~ 158 (668)
|+||.........++...+++|+.++.+++++|++.+ ++||++||.++||.....+. +|+++. .|.+.
T Consensus 73 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~---~e~~~~~~~~~~~~~~~~ 147 (345)
T 2bll_A 73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYF---DEDHSNLIVGPVNKPRWI 147 (345)
T ss_dssp ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSB---CTTTCCCBCCCTTCGGGH
T ss_pred EcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCc---CCcccccccCcccCcccc
Confidence 9999765433345777899999999999999999876 89999999999998654332 343322 34458
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
|+.+|..+|.+++.++++++++++++||++||||+... ..++..++..+..+.++.+++++.+.++|+|++|
T Consensus 148 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 227 (345)
T 2bll_A 148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred cHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHH
Confidence 99999999999999988889999999999999998642 3467778888888888888888899999999999
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCC-cccHHHHHHHHHHHhCCCCCc-ceEec------cC------CCCCCcccccC
Q 005949 231 VAEAFECILHKG---EVGHVYNVGTKK-ERRVIDVAKDICKLFSMDPET-SIKFV------EN------RPFNDQRYFLD 293 (668)
Q Consensus 231 ~a~ai~~~~~~~---~~~~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~-~~~~~------~~------~~~~~~~~~~~ 293 (668)
+|++++.+++.+ ..+++||+++++ .+|+.|+++.+.+.+|.+... .+... .. .........+|
T Consensus 228 va~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (345)
T 2bll_A 228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 307 (345)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred HHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhccc
Confidence 999999999865 357899999986 899999999999999876431 11000 00 00112446789
Q ss_pred hHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 294 DQKLT-SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 294 ~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
++|++ +|||+|+++++++|+++++||+++.
T Consensus 308 ~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 338 (345)
T 2bll_A 308 IRNAHRCLDWEPKIDMQETIDETLDFFLRTV 338 (345)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence 99997 5999999999999999999998754
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=326.38 Aligned_cols=298 Identities=17% Similarity=0.195 Sum_probs=235.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+|||||||||||++|++.|+++..+++|++++|...... + ..+++++.+|+.|.+.+.+++...++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~vi 73 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD---V-----VNSGPFEVVNALDFNQIEHLVEVHKITDIY 73 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH---H-----HHSSCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc---c-----cCCCceEEecCCCHHHHHHHHhhcCCCEEE
Confidence 46899999999999999999999822577888888643211 1 125678999999999999998655899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+||.... ....++...+++|+.++.+++++|++.+ +++||++||..+|+...... ..+|+.+..|.++|+.+|..
T Consensus 74 h~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~--~~~e~~~~~~~~~Y~~sK~~ 149 (312)
T 2yy7_A 74 LMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKE--NTPQYTIMEPSTVYGISKQA 149 (312)
T ss_dssp ECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSS--SBCSSCBCCCCSHHHHHHHH
T ss_pred ECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCC--CccccCcCCCCchhHHHHHH
Confidence 99997543 2345677899999999999999999876 88999999999999754322 23566777888999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----C-hHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----K-LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
+|.+++.++.+++++++++||+++|||+..+. . +...+.+.+ .++.+.+++++.+.++|+|++|+|++++.+++
T Consensus 150 ~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 228 (312)
T 2yy7_A 150 GERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAI-ADKKYECFLSSETKMPMMYMDDAIDATINIMK 228 (312)
T ss_dssp HHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHH-HTSEEEESSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHH-cCCCeEEecCCCceeeeeeHHHHHHHHHHHHh
Confidence 99999998888899999999999999764332 2 344444444 44456666788899999999999999999998
Q ss_pred cCCC----CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCC---CCCcccccChHHHHh-CCCcccCCHHHHH
Q 005949 241 KGEV----GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP---FNDQRYFLDDQKLTS-LGWSERTIWEEGL 312 (668)
Q Consensus 241 ~~~~----~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~k~~~-lG~~~~~~~~~~l 312 (668)
++.. +++||+++ +.+|+.|+++.+.+.+|. . .+.+.+... .......+|++|+++ |||+|+++++++|
T Consensus 229 ~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~--~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l 304 (312)
T 2yy7_A 229 APVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-F--TITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMT 304 (312)
T ss_dssp SCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-C--EEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHH
T ss_pred CcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-C--ceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHH
Confidence 7643 47999995 889999999999999883 1 233322211 011235789999975 9999999999999
Q ss_pred HHHHHHHh
Q 005949 313 RKTIEWYT 320 (668)
Q Consensus 313 ~~~~~~~~ 320 (668)
+++++||+
T Consensus 305 ~~~~~~~k 312 (312)
T 2yy7_A 305 KDMIEHLS 312 (312)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99999985
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=320.30 Aligned_cols=295 Identities=17% Similarity=0.239 Sum_probs=231.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+|||||||||||++|++.|+++ +++|++++|.... ...+ ...+++++.+|+.|.+.+.+++ .++|+||
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~l----~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 82 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQ--IQRL----AYLEPECRVAEMLDHAGLERAL--RGLDGVI 82 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSC--GGGG----GGGCCEEEECCTTCHHHHHHHT--TTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHh--hhhh----ccCCeEEEEecCCCHHHHHHHH--cCCCEEE
Confidence 469999999999999999999998 6889999886431 1111 1236889999999999999998 6799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC----CChhHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP----TNPYSA 161 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p----~~~Y~~ 161 (668)
|+|+... ....++...+++|+.++.+++++|++.+ +++||++||.++|+....... . +|+++..| .+.|+.
T Consensus 83 h~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~-~-~E~~~~~p~~~~~~~Y~~ 157 (342)
T 2x4g_A 83 FSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLP-G-HEGLFYDSLPSGKSSYVL 157 (342)
T ss_dssp EC--------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSC-B-CTTCCCSSCCTTSCHHHH
T ss_pred ECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCC-C-CCCCCCCccccccChHHH
Confidence 9999754 2345677899999999999999999987 899999999999987654211 2 67777778 889999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC-CCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-FPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
+|..+|.+++.++++ +++++++||+.+|||+. .+ . +..++..+..+....+ +.+.++|+|++|+|++++.+++
T Consensus 158 sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~ 231 (342)
T 2x4g_A 158 CKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALE 231 (342)
T ss_dssp HHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHh
Confidence 999999999998877 99999999999999987 32 2 5566777777766554 5688999999999999999998
Q ss_pred cCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec----------------cC----CCC----CCcccccChHH
Q 005949 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV----------------EN----RPF----NDQRYFLDDQK 296 (668)
Q Consensus 241 ~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----------------~~----~~~----~~~~~~~~~~k 296 (668)
++..+++||++++. +|+.|+++.+.+.+|.+....+... .. .+. ......+|++|
T Consensus 232 ~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 310 (342)
T 2x4g_A 232 RGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRK 310 (342)
T ss_dssp HSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHH
T ss_pred CCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHH
Confidence 87668899999998 9999999999999998754211100 00 000 12356789999
Q ss_pred HHh-CCC-cccCCHHHHHHHHHHHHhhCC
Q 005949 297 LTS-LGW-SERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 297 ~~~-lG~-~~~~~~~~~l~~~~~~~~~~~ 323 (668)
+++ ||| +| ++++++|+++++||+++.
T Consensus 311 ~~~~lG~~~p-~~~~~~l~~~~~~~~~~g 338 (342)
T 2x4g_A 311 AREELGFFST-TALDDTLLRAIDWFRDNG 338 (342)
T ss_dssp HHHHHCCCCC-SCHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCCCC-CCHHHHHHHHHHHHHHcC
Confidence 975 999 99 899999999999999864
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=321.37 Aligned_cols=277 Identities=15% Similarity=0.167 Sum_probs=224.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|++|+||||| +||||++|++.|+++ +++|++++|.... ...+++++.+|+.|.+.+.+++. .++|+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~-~~~d~ 66 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVH-LRPEI 66 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGG-GCCSE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhc-CCCCE
Confidence 3467999999 599999999999999 6788888886421 13578999999999999988884 25999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+|+... .++...+++|+.++.+++++|++.+ +++|||+||.++||.....+. +|+++..|.+.|+.+|
T Consensus 67 vih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~---~E~~~~~p~~~Y~~sK 137 (286)
T 3gpi_A 67 LVYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWL---DEDTPPIAKDFSGKRM 137 (286)
T ss_dssp EEECHHHHH-----HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEE---CTTSCCCCCSHHHHHH
T ss_pred EEEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCC---CCCCCCCCCChhhHHH
Confidence 999998632 4556788899999999999999866 899999999999998765443 7778888999999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc--
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK-- 241 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~-- 241 (668)
..+|.+ +.+ ++++++||+++|||+.. .++..+.+ .. ..+++.+.++|+|++|+|++++.++++
T Consensus 138 ~~~E~~-~~~-----~~~~ilR~~~v~G~~~~------~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~~~~~~~ 202 (286)
T 3gpi_A 138 LEAEAL-LAA-----YSSTILRFSGIYGPGRL------RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAYLIQQRS 202 (286)
T ss_dssp HHHHHH-GGG-----SSEEEEEECEEEBTTBC------HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-Hhc-----CCeEEEecccccCCCch------hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHHHHhhhc
Confidence 999998 543 99999999999999863 23344444 22 236778899999999999999999988
Q ss_pred -CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccC-CHHHHHHHHHHHH
Q 005949 242 -GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERT-IWEEGLRKTIEWY 319 (668)
Q Consensus 242 -~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~-~~~~~l~~~~~~~ 319 (668)
...+++||+++++++|+.|+++.+.+.+|.+.+.... + .......+|++|+++|||+|++ +++++|+++++|+
T Consensus 203 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~--~---~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~ 277 (286)
T 3gpi_A 203 HAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT--P---PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAM 277 (286)
T ss_dssp TSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC--C---CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHH
T ss_pred cCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC--c---ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHH
Confidence 4678999999999999999999999999987543211 1 2334578999999999999998 7999999999999
Q ss_pred hhCC
Q 005949 320 TQNP 323 (668)
Q Consensus 320 ~~~~ 323 (668)
..+.
T Consensus 278 ~~~~ 281 (286)
T 3gpi_A 278 REGH 281 (286)
T ss_dssp TC--
T ss_pred hccc
Confidence 8653
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=322.91 Aligned_cols=298 Identities=20% Similarity=0.260 Sum_probs=223.0
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---CCCCEE
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---ESIDTI 84 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~V 84 (668)
+|||||||||||++|++.|+++| .++|++++|.........+ .++. +.+|+.|.+.+.+++.. .++|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTKFVNL------VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCSSGGGGHHH------HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCC-CcEEEEEccCCCCchhhhc------Ccce-eccccccHHHHHHHHhccccCCCcEE
Confidence 59999999999999999999983 1788888886432211111 1223 67899999999888842 159999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
||+|+.... ...++...+++|+.++.+++++|++.+ + +||++||.++||.....+ .+|+.+..|.++|+.+|.
T Consensus 73 i~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~---~~E~~~~~p~~~Y~~sK~ 145 (310)
T 1eq2_A 73 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDF---IESREYEKPLNVYGYSKF 145 (310)
T ss_dssp EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCB---CSSGGGCCCSSHHHHHHH
T ss_pred EECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCC---CCCCCCCCCCChhHHHHH
Confidence 999997654 456778899999999999999999987 6 999999999999865433 367777888899999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceeecCCCc-eEeceeHHHHHHHHHHHH
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSN-VRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~ai~~~~ 239 (668)
.+|.+++.++++++++++++||++||||+..+ ..+++.+++.+..++++.+++++.+ .++|+|++|+|++++.++
T Consensus 146 ~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~ 225 (310)
T 1eq2_A 146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (310)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHH
Confidence 99999999988889999999999999998642 3677888888888888777788888 999999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC--CCCCCcccccChHHHHhCCC-cccCCHHHHHHHHH
Q 005949 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN--RPFNDQRYFLDDQKLTSLGW-SERTIWEEGLRKTI 316 (668)
Q Consensus 240 ~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lG~-~~~~~~~~~l~~~~ 316 (668)
+.+. +++||+++++++|+.|+++.+.+.+|.+ .......+. .........+|++|+++||| .|.++++++|++++
T Consensus 226 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~ 303 (310)
T 1eq2_A 226 ENGV-SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYM 303 (310)
T ss_dssp HHCC-CEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHH
T ss_pred hcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHHH
Confidence 8877 8899999999999999999999999876 211111111 01112335788999999999 78899999999999
Q ss_pred HHHhhC
Q 005949 317 EWYTQN 322 (668)
Q Consensus 317 ~~~~~~ 322 (668)
+||+++
T Consensus 304 ~~~~~~ 309 (310)
T 1eq2_A 304 AWLNRD 309 (310)
T ss_dssp HHTC--
T ss_pred HHHHhc
Confidence 998753
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-38 Score=319.32 Aligned_cols=294 Identities=20% Similarity=0.293 Sum_probs=233.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++|+||||||+||||++|++.|+++ +++|++++|...... ..... ..+++++.+|+.|.+.+.+++...++|+
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~--~~~~~--l~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKR--EVLPP--VAGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCG--GGSCS--CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccch--hhhhc--cCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 45689999999999999999999999 688999988542111 00111 1478999999999999999984338999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+||..... +..++. +++|+.++.+++++|.+.+ +++||++||..+|+...... .+.+|++ .|.+.|+.+|
T Consensus 92 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~-~~~~E~~--~~~~~Y~~sK 164 (330)
T 2pzm_A 92 VVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVP-IPIDSPT--APFTSYGISK 164 (330)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSS-BCTTCCC--CCCSHHHHHH
T ss_pred EEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCC-CCcCCCC--CCCChHHHHH
Confidence 99999976542 223333 8999999999999999877 89999999999998764320 0224444 6778999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHH-HHHHHHhcC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE-AFECILHKG 242 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-ai~~~~~~~ 242 (668)
..+|.+++.+ +++++++||+++|||+. ...+++.++..+..+. .+++++. .++|+|++|+|+ +++.+++.+
T Consensus 165 ~~~e~~~~~~----~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~ 236 (330)
T 2pzm_A 165 TAGEAFLMMS----DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGR 236 (330)
T ss_dssp HHHHHHHHTC----SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHc----CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcC
Confidence 9999999765 79999999999999986 4567777777777665 4445666 889999999999 999999876
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHH-----HhCCCcccCCHHHHHHHHHH
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL-----TSLGWSERTIWEEGLRKTIE 317 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~lG~~~~~~~~~~l~~~~~ 317 (668)
. +++||++++.++|+.|+++.+.+.+|.+ . +.+.+..+ ......+|++|+ ++|||+|+++++++|+++++
T Consensus 237 ~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~--~~~~~~~~-~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~ 311 (330)
T 2pzm_A 237 P-TGVFNVSTGEGHSIKEVFDVVLDYVGAT-L--AEPVPVVA-PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLA 311 (330)
T ss_dssp C-CEEEEESCSCCEEHHHHHHHHHHHHTCC-C--SSCCCEEC-CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred C-CCEEEeCCCCCCCHHHHHHHHHHHhCCC-C--ceeCCCCc-chhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHH
Confidence 6 8899999999999999999999999986 2 22222222 334466777777 88999999999999999999
Q ss_pred HHhhCC
Q 005949 318 WYTQNP 323 (668)
Q Consensus 318 ~~~~~~ 323 (668)
||+++.
T Consensus 312 ~~~~~~ 317 (330)
T 2pzm_A 312 WYDKYG 317 (330)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 998764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=315.75 Aligned_cols=293 Identities=20% Similarity=0.247 Sum_probs=230.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
++||+|||||||||||++|++.|+++ +++|++++|..... ...+.. ..+++++.+|+.|.+.+.+++...++|+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGR-REHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCC-GGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccc-hhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 46789999999999999999999999 68999998864211 111111 1478999999999999999985445999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccC----CCCCCcCCCCCCCCCCCCC-Ch
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG----ETDEDAVVGNHEASQLLPT-NP 158 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg----~~~~~~~~~~~e~~~~~p~-~~ 158 (668)
|||+||..... +..++. +++|+.++.+++++|.+.+ +++||++||.++|+ .... +.+|+. .|. +.
T Consensus 93 vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~----~~~E~~--~p~~~~ 162 (333)
T 2q1w_A 93 VVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV----RLDHPR--NPANSS 162 (333)
T ss_dssp EEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB----CTTSCC--CCTTCH
T ss_pred EEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC----CcCCCC--CCCCCc
Confidence 99999976543 223333 8999999999999999976 89999999999998 4332 234544 666 89
Q ss_pred hHHHHHHHHHHHHH-HHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 159 YSATKAGAEMLVMA-YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 159 Y~~sK~~~E~~~~~-~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
|+.+|..+|.+++. ++ +++++||+++|||+. ...+++.+++.+..+. .+++ +.+.++|+|++|+|++++.
T Consensus 163 Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 163 YAISKSANEDYLEYSGL-----DFVTFRLANVVGPRN-VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTC-CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCC-cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence 99999999999987 54 789999999999983 3467777877777766 3445 6678999999999999999
Q ss_pred HHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc-eEeccC-CCCCCcccccChHHHHhCCCcccCCHHHHHHHH
Q 005949 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS-IKFVEN-RPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKT 315 (668)
Q Consensus 238 ~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~-~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~ 315 (668)
+++.+. +++||++++..+|+.|+++.+.+.+|.+ ... +..... .........+|++|++++||+|+++++++|+++
T Consensus 234 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~ 311 (333)
T 2q1w_A 234 AVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAA 311 (333)
T ss_dssp HHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred HHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHH
Confidence 998776 8899999999999999999999999986 221 111111 111124578999999866999999999999999
Q ss_pred HHHHhhCC
Q 005949 316 IEWYTQNP 323 (668)
Q Consensus 316 ~~~~~~~~ 323 (668)
++||+++.
T Consensus 312 ~~~~~~~~ 319 (333)
T 2q1w_A 312 VAYFREYG 319 (333)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHC
Confidence 99999764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-38 Score=315.46 Aligned_cols=283 Identities=20% Similarity=0.167 Sum_probs=233.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|+ + +++|++++|.. ..+.+|+.|.+.+.+++...++|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~-----------------~~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHS-----------------KEFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTC-----------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEecccc-----------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999 7 68999998853 134789999999999985446999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||......+..++...+++|+.++.+++++|++.+ + +|||+||.++|+.....+ .+|+++..|.+.|+.+|..+
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~---~~E~~~~~p~~~Y~~sK~~~ 135 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIP---WQETDATSPLNVYGKTKLAG 135 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCC---BCTTSCCCCSSHHHHHHHHH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCC---CCCCCCCCCccHHHHHHHHH
Confidence 999876544567888999999999999999999877 5 899999999999875433 36777888899999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC--C-
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG--E- 243 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~--~- 243 (668)
|.+++.++ .+++++||+++|||+.. .+++.+++.+..+.++.+.++ +.++|+|++|+|++++.+++++ .
T Consensus 136 E~~~~~~~----~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~~~~ 207 (299)
T 1n2s_A 136 EKALQDNC----PKHLIFRTSWVYAGKGN--NFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRVALNKP 207 (299)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSSC--CHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHHhC----CCeEEEeeeeecCCCcC--cHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHHhcccc
Confidence 99998764 48999999999999763 677788888888877766554 8899999999999999999875 3
Q ss_pred -CCceEEEcCCCcccHHHHHHHHHHHhCCCCC----cceEeccC-----CCCCCcccccChHHHHh-CCCcccCCHHHHH
Q 005949 244 -VGHVYNVGTKKERRVIDVAKDICKLFSMDPE----TSIKFVEN-----RPFNDQRYFLDDQKLTS-LGWSERTIWEEGL 312 (668)
Q Consensus 244 -~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~----~~~~~~~~-----~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l 312 (668)
.+++||+++++.+|+.|+++.+.+.+|.+.. ..+...+. .........+|++|+++ |||+|+ +++++|
T Consensus 208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l 286 (299)
T 1n2s_A 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV 286 (299)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred ccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHH
Confidence 3789999999999999999999999986521 12222221 11123456899999975 999998 899999
Q ss_pred HHHHHHHhhCC
Q 005949 313 RKTIEWYTQNP 323 (668)
Q Consensus 313 ~~~~~~~~~~~ 323 (668)
+++++||+++.
T Consensus 287 ~~~~~~~~~~~ 297 (299)
T 1n2s_A 287 KRMLTEMFTTT 297 (299)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHhcC
Confidence 99999998754
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=308.80 Aligned_cols=275 Identities=21% Similarity=0.228 Sum_probs=229.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
.|+|||||||||||++|++.|+++ +++|++++|. .+|+.|.+.+.+++...++|+||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQ---------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTT---------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCc---------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 479999999999999999999998 6899999883 37999999999988544899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+||......+..++...+++|+.++.+++++|++.+ + +||++||.++|+.....+ .+|+++..|.+.|+.+|..
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~---~~E~~~~~~~~~Y~~sK~~ 143 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEP---ITEFDEVNPQSAYGKTKLE 143 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSC---BCTTSCCCCCSHHHHHHHH
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCC---CCCCCCCCCccHHHHHHHH
Confidence 9999866544456788899999999999999999987 6 999999999999765333 3677788888999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCC
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~ 245 (668)
+|.+++.++ .+++++||++|||| . ..+++.++..+..+..+.+.+ .+.++|+|++|+|++++.+++.+ .+
T Consensus 144 ~E~~~~~~~----~~~~~lR~~~v~G~-~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~~ 213 (292)
T 1vl0_A 144 GENFVKALN----PKYYIVRTAWLYGD-G--NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-NY 213 (292)
T ss_dssp HHHHHHHHC----SSEEEEEECSEESS-S--SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-CC
T ss_pred HHHHHHhhC----CCeEEEeeeeeeCC-C--cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-CC
Confidence 999998764 46899999999999 3 367777777777777666654 47899999999999999999877 78
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC-----CCCCCcccccChHHHHh-CCCcccCCHHHHHHHHHHHH
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN-----RPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~ 319 (668)
++||+++++++|+.|+++.+.+.+|.+... ...+. .........+|++|+++ |||+|+ +++++|+++++||
T Consensus 214 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~ 290 (292)
T 1vl0_A 214 GTFHCTCKGICSWYDFAVEIFRLTGIDVKV--TPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLL 290 (292)
T ss_dssp EEEECCCBSCEEHHHHHHHHHHHHCCCCEE--EEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHH
T ss_pred cEEEecCCCCccHHHHHHHHHHHhCCCCce--eeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHh
Confidence 899999999999999999999999986432 21111 11223456799999985 999999 9999999999998
Q ss_pred hh
Q 005949 320 TQ 321 (668)
Q Consensus 320 ~~ 321 (668)
++
T Consensus 291 ~~ 292 (292)
T 1vl0_A 291 QM 292 (292)
T ss_dssp TC
T ss_pred cC
Confidence 63
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=315.27 Aligned_cols=294 Identities=18% Similarity=0.212 Sum_probs=206.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+|||||||||||++|++.|+++ +++|++++|.... .+ ++.+|+.|.+.+.+++...++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRAR------------PK--FEQVNLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC--------------------------------CHHHHHHHCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCC------------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence 579999999999999999999998 6889999875321 12 7789999999998888544699999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+||......+..++...+++|+.++.+++++|.+.+ + +||++||..+|+... . +.+|+++..|.+.|+.+|..
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~-~---~~~E~~~~~~~~~Y~~sK~~ 139 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTN-P---PYREEDIPAPLNLYGKTKLD 139 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSS-C---SBCTTSCCCCCSHHHHHHHH
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCC-C---CCCCCCCCCCcCHHHHHHHH
Confidence 9999866544556778899999999999999999977 5 999999999998832 2 23677778888999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHH-cCCCceeecCCCceEeceeHHHHHHHHHHHHhcC-
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAM-RGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG- 242 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~- 242 (668)
+|.+++.+ +++++++||+.||||...+. .++..++..+. .+..+.+. +.+.++|+|++|+|++++.+++++
T Consensus 140 ~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~ 213 (315)
T 2ydy_A 140 GEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRM 213 (315)
T ss_dssp HHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhc
Confidence 99999876 47789999999999976421 45555666666 66666554 457889999999999999888753
Q ss_pred ---CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec--cC-CCCCCcccccChHHHHhCCCcccCCHHHHHHHHH
Q 005949 243 ---EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV--EN-RPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTI 316 (668)
Q Consensus 243 ---~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~-~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~ 316 (668)
..+++||+++++++|+.|+++.+.+.+|.+........ +. .........+|++|++++||+|+++++++|++++
T Consensus 214 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~ 293 (315)
T 2ydy_A 214 LDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 293 (315)
T ss_dssp TCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHH
T ss_pred cccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHH
Confidence 56789999999999999999999999998754111111 11 1122345688999998779999999999999999
Q ss_pred HHHhhCCCccc
Q 005949 317 EWYTQNPDWWG 327 (668)
Q Consensus 317 ~~~~~~~~~~~ 327 (668)
+||+++..++.
T Consensus 294 ~~~~~~~~~~~ 304 (315)
T 2ydy_A 294 WPFLIDKRWRQ 304 (315)
T ss_dssp GGGCC------
T ss_pred HHHccchhhhh
Confidence 99998765443
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-37 Score=314.71 Aligned_cols=305 Identities=16% Similarity=0.120 Sum_probs=241.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCC-----CCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYP-----EYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~-----~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|++|+||||||+||||++|++.|+++|+ .++|++++|...... . ....+++++.+|+.|.+.+.+++.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~--~----~~~~~~~~~~~Dl~d~~~~~~~~~- 84 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP--A----GFSGAVDARAADLSAPGEAEKLVE- 84 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC--T----TCCSEEEEEECCTTSTTHHHHHHH-
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc--c----ccCCceeEEEcCCCCHHHHHHHHh-
Confidence 5678999999999999999999999931 078999988642111 0 123468899999999999988874
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC----CCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG----QIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
.++|+|||+||.... .+..++...+++|+.++.+++++|++.+ .+++||++||..+|+..... +.+|+++..
T Consensus 85 ~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~---~~~E~~~~~ 160 (342)
T 2hrz_A 85 ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY---PIPDEFHTT 160 (342)
T ss_dssp TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS---SBCTTCCCC
T ss_pred cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC---CcCCCCCCC
Confidence 479999999997542 2345677899999999999999998865 37899999999999875432 236777888
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeC-CCCCC---CChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYG-PNQFP---EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
|.++|+.+|..+|.+++.++.+++++.+++|++++|| |+... ..++..+++....+.+..++.++...++++|++|
T Consensus 161 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D 240 (342)
T 2hrz_A 161 PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRS 240 (342)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHH
Confidence 8899999999999999999888789999999999999 66422 2466777787888887766666677788999999
Q ss_pred HHHHHHHHHhcCC----CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCC----CCCcccccChHHHHhCCC
Q 005949 231 VAEAFECILHKGE----VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP----FNDQRYFLDDQKLTSLGW 302 (668)
Q Consensus 231 ~a~ai~~~~~~~~----~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~k~~~lG~ 302 (668)
++++++.+++.+. .+++||++ +..+|+.|+++.+.+.+|.+....+.+.+... .......+|++|+++|||
T Consensus 241 va~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~ 319 (342)
T 2hrz_A 241 AVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGF 319 (342)
T ss_dssp HHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTC
T ss_pred HHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHHcCC
Confidence 9999999998753 46799996 57899999999999999875321222222110 011223589999988999
Q ss_pred cccCCHHHHHHHHHHHHh
Q 005949 303 SERTIWEEGLRKTIEWYT 320 (668)
Q Consensus 303 ~~~~~~~~~l~~~~~~~~ 320 (668)
+|+++++++|+++++||+
T Consensus 320 ~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 320 TAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp CCCSSHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHhc
Confidence 999999999999999997
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=340.33 Aligned_cols=318 Identities=27% Similarity=0.385 Sum_probs=242.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
+++|+||||||+||||++|++.|+++ +++|++++|...... ...+. .....+++++.+|+.|.+.+.+++...++
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLE-VLTKHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHH-HHHTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHh-hccCCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 45689999999999999999999999 688999888642210 00000 00134688999999999999999855589
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC-cCCCCCCCCCCCCCChhH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED-AVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~-~~~~~~e~~~~~p~~~Y~ 160 (668)
|+|||+||.........++.+.+++|+.++.+++++|++.+ +++||++||.++||..... ...+.+|+.+..|.+.|+
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~ 164 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG 164 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence 99999999865433445667889999999999999999876 8999999999999875321 112235667777889999
Q ss_pred HHHHHHHHHHHHHHHh--cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHHc-CCCceeec------CCCc
Q 005949 161 ATKAGAEMLVMAYGRS--YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMR-GLPLPIHG------DGSN 221 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~-~~~~~~~~------~~~~ 221 (668)
.+|..+|.+++.++.+ .+++++++||+++|||+.. +..+++.+.+.+.. +.++.+++ ++.+
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 9999999999998776 6899999999999998531 23456655554432 34555555 6788
Q ss_pred eEeceeHHHHHHHHHHHHhcC-------CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccCh
Q 005949 222 VRSYLYCEDVAEAFECILHKG-------EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDD 294 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~-------~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 294 (668)
.++|+|++|+|++++.+++.. ..+++||+++++.+|+.|+++.+++.+|.+.+.. ..+.++.......+|+
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~d~ 322 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK--VTGRRAGDVLNLTAKP 322 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------CCCCCBCC
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCce--ecCCCCCccccccCCH
Confidence 999999999999999888642 2347999999999999999999999999875422 2222333344578899
Q ss_pred HHHH-hCCCcccCCHHHHHHHHHHHHhhCCCccc
Q 005949 295 QKLT-SLGWSERTIWEEGLRKTIEWYTQNPDWWG 327 (668)
Q Consensus 295 ~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~~~~~ 327 (668)
+|++ +|||+|+++++++|+++++|++++..++.
T Consensus 323 ~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~ 356 (699)
T 1z45_A 323 DRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQ 356 (699)
T ss_dssp HHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcchh
Confidence 9997 59999999999999999999998875433
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=311.07 Aligned_cols=297 Identities=20% Similarity=0.223 Sum_probs=233.1
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
+|||||||||||++|++.|+++..+++|++++|..... .+++++.+|+.|.+.+.+++...++|+|||+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~ 69 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHL 69 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-----------TTCCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-----------cCceEEEecCCCHHHHHHHHhhcCCcEEEEC
Confidence 59999999999999999999982257788888753211 1467899999999999999865589999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 167 (668)
|+.... ....++...+++|+.++.+++++|++.+ +++||++||..+|+...... ..+|+.+..|.++|+.+|..+|
T Consensus 70 a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~--~~~e~~~~~p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 70 AGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKN--KVPSITITRPRTMFGVTKIAAE 145 (317)
T ss_dssp CCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSS--SBCSSSCCCCCSHHHHHHHHHH
T ss_pred CcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCC--CccccccCCCCchHHHHHHHHH
Confidence 997542 2345677899999999999999999876 89999999999999753222 2356677788999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 168 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
.+++.++++++++++++||+.+||+...+. ..+..++.....++.+..+.++.+.++|+|++|++++++.+++++.
T Consensus 146 ~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~ 225 (317)
T 3ajr_A 146 LLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADR 225 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCc
Confidence 999998888899999999999999764321 2233333444555566666778889999999999999999998764
Q ss_pred ----CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCC---CCCcccccChHHHH-hCCCcccCCHHHHHHHH
Q 005949 244 ----VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP---FNDQRYFLDDQKLT-SLGWSERTIWEEGLRKT 315 (668)
Q Consensus 244 ----~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~ 315 (668)
.+++||+++ ..+|+.|+++.+.+.+|.. .+.+.+... .......+|++|++ +|||+|+++++++|+++
T Consensus 226 ~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~---~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~ 301 (317)
T 3ajr_A 226 DKLVLRNGYNVTA-YTFTPSELYSKIKERIPEF---EIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDM 301 (317)
T ss_dssp GGCSSCSCEECCS-EEECHHHHHHHHHTTCCSC---CEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred cccccCceEecCC-ccccHHHHHHHHHHHCCcc---ccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 247999995 6799999999999988732 233322100 01123468999997 59999999999999999
Q ss_pred HHHHhhCC
Q 005949 316 IEWYTQNP 323 (668)
Q Consensus 316 ~~~~~~~~ 323 (668)
++|++++.
T Consensus 302 ~~~~~~~~ 309 (317)
T 3ajr_A 302 IDHISEKL 309 (317)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhhh
Confidence 99998754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=336.40 Aligned_cols=307 Identities=21% Similarity=0.335 Sum_probs=244.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHH-HHHHhccCCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADL-VNFLLITESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~~~d 82 (668)
+++|+|||||||||||++|++.|++++ +++|++++|.... ...+ ....+++++.+|++|.+. +.+++ .++|
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~-g~~V~~~~r~~~~--~~~~---~~~~~v~~v~~Dl~d~~~~~~~~~--~~~D 384 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDA--ISRF---LNHPHFHFVEGDISIHSEWIEYHV--KKCD 384 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSS-SEEEEEEESCCTT--TGGG---TTCTTEEEEECCTTTCHHHHHHHH--HHCS
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcC-CCEEEEEEcCchh--hhhh---ccCCceEEEECCCCCcHHHHHHhh--cCCC
Confidence 456899999999999999999999973 5789999886432 1111 123578999999999765 67677 4799
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC-------CC
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL-------LP 155 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~-------~p 155 (668)
+|||+||.........++.+.+++|+.++.+++++|++.+ ++||++||.++||.....+. +|+++. .|
T Consensus 385 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~---~E~~~~~~~~p~~~p 459 (660)
T 1z7e_A 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYF---DEDHSNLIVGPVNKP 459 (660)
T ss_dssp EEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSB---CTTTCCEEECCTTCT
T ss_pred EEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCccc---CCCccccccCcccCC
Confidence 9999999866444456778899999999999999999876 89999999999987654332 444331 45
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
.+.|+.+|..+|.+++.++++++++++++||++||||+... ..+++.++..+..+.++.+++++.+.++|+|
T Consensus 460 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 539 (660)
T 1z7e_A 460 RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 539 (660)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEE
Confidence 66899999999999999887789999999999999998642 4677888888888888888888889999999
Q ss_pred HHHHHHHHHHHHhcCC---CCceEEEcCCC-cccHHHHHHHHHHHhCCCCCc-ceEec------------cCCCCCCccc
Q 005949 228 CEDVAEAFECILHKGE---VGHVYNVGTKK-ERRVIDVAKDICKLFSMDPET-SIKFV------------ENRPFNDQRY 290 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~---~~~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~-~~~~~------------~~~~~~~~~~ 290 (668)
++|+|++++.+++.+. .+++||+++++ ++|+.|+++.+.+.+|.+... .+... ..........
T Consensus 540 v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 619 (660)
T 1z7e_A 540 IRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHR 619 (660)
T ss_dssp HHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCC
T ss_pred HHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhc
Confidence 9999999999998753 57899999886 899999999999999865321 11100 0011122446
Q ss_pred ccChHHHH-hCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 291 FLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 291 ~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
.+|++|++ .|||+|+++++++|+++++||+++.
T Consensus 620 ~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~ 653 (660)
T 1z7e_A 620 KPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_dssp CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred ccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhc
Confidence 78999997 4999999999999999999998765
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-37 Score=310.36 Aligned_cols=270 Identities=19% Similarity=0.199 Sum_probs=221.0
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcccc---cccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccce
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFEY---GKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTI 458 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~---~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 458 (668)
|+||||||||+||||+++++.|+++|++|.. ..+|++|.+.+.+++++.++|+|||+|+.. ....+..++...+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~~~~~~ 80 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYT---KVDQAEKERDLAY 80 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHHHH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCccc---ChHHHhcCHHHHH
Confidence 3469999999999999999999999998855 468999999999999987789999999987 5555667888999
Q ss_pred ehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEe
Q 005949 459 RTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 538 (668)
Q Consensus 459 ~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~ 538 (668)
++|+.++.+++++|++.++++|++||..+|++....| .+|+.+..|.+.|+.+|..+|++++.+.. +++
T Consensus 81 ~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----~~~ 149 (287)
T 3sc6_A 81 VINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEG-------YDEFHNPAPINIYGASKYAGEQFVKELHN----KYF 149 (287)
T ss_dssp HHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSC-------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS----SEE
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHhCC----CcE
Confidence 9999999999999999999999999999998766555 45555667789999999999999998755 568
Q ss_pred eeecCCCCChh--hH----HHHhhcccceeecC---CCcccHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHh
Q 005949 539 MPISSDLNNPR--NF----ITKISRYNKVVNIP---NSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKK 609 (668)
Q Consensus 539 ~~r~~~~~g~~--~~----~~~~~~~~~~~~~~---~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~ 609 (668)
++|++++|||. .+ +..+..+......+ .+++|++|+|++++.+++++.+|+||+++++.+|+.|+++.+++
T Consensus 150 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~ 229 (287)
T 3sc6_A 150 IVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFS 229 (287)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCCCEEEECCCBSCEEHHHHHHHHHH
T ss_pred EEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCCCCeEEEcCCCcccHHHHHHHHHH
Confidence 99999999985 33 33344444433333 38999999999999999987789999999999999999999999
Q ss_pred hcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCC
Q 005949 610 YINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 610 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~ 666 (668)
.+|.+..+.+++..+.. ..........+|++|++++++ +.++|+++|+++++++.+
T Consensus 230 ~~g~~~~~~~~~~~~~~-~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 230 YANMKVNVLPVSTEEFG-AAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp HHTCCCEEEEECHHHHC-CSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred HcCCCcceeeeehhhcC-cccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence 99998776666554321 111222356789999995555 668999999999999875
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=300.12 Aligned_cols=271 Identities=20% Similarity=0.206 Sum_probs=214.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
.|||+|||||| ||||++|++.|+++ +++|++++|.... ...+ ...+++++.+|+.|.+ + .++|+
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~----~~~~~~~~~~D~~d~~-----~--~~~d~ 66 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSRNPDQ--MEAI----RASGAEPLLWPGEEPS-----L--DGVTH 66 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEESCGGG--HHHH----HHTTEEEEESSSSCCC-----C--TTCCE
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEcChhh--hhhH----hhCCCeEEEecccccc-----c--CCCCE
Confidence 35689999998 99999999999999 6899999986421 1111 1247899999999954 3 68999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
|||+|+..... + ..+.++++++++. ..+++|||+||.++||.....+. +|+++..|.++|+.+
T Consensus 67 vi~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~---~E~~~~~p~~~Y~~s 130 (286)
T 3ius_A 67 LLISTAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWV---DETTPLTPTAARGRW 130 (286)
T ss_dssp EEECCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEE---CTTSCCCCCSHHHHH
T ss_pred EEECCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCc---CCCCCCCCCCHHHHH
Confidence 99999975432 1 1347888999883 23899999999999998765433 778888899999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
|..+|++++.+ .+++++++||+++|||+... +..+..+....+.++ .+.++|+|++|+|++++.+++++
T Consensus 131 K~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~ 199 (286)
T 3ius_A 131 RVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP-------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARP 199 (286)
T ss_dssp HHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS-------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhh---cCCCEEEEeccceECCCchH-------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCC
Confidence 99999999877 48999999999999998643 123345666666554 57899999999999999999998
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCC------CCcccccChHHHHh-CCCcccC-CHHHHHHH
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPF------NDQRYFLDDQKLTS-LGWSERT-IWEEGLRK 314 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~k~~~-lG~~~~~-~~~~~l~~ 314 (668)
..+++||+++++++|+.|+++.+.+.+|.+.+..+........ ......+|++|+++ |||+|++ +++++|++
T Consensus 200 ~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~ 279 (286)
T 3ius_A 200 DPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEA 279 (286)
T ss_dssp CTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHH
T ss_pred CCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHH
Confidence 8888999999999999999999999999876543333222111 12456789999986 9999998 79999999
Q ss_pred HHH
Q 005949 315 TIE 317 (668)
Q Consensus 315 ~~~ 317 (668)
+++
T Consensus 280 ~~~ 282 (286)
T 3ius_A 280 LQA 282 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=311.69 Aligned_cols=271 Identities=19% Similarity=0.172 Sum_probs=218.3
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCC-------cccccccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGI-------PFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHK 454 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~-------~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~ 454 (668)
+||+|||||||||||++|+++|+++|+ .+..+.+|++|++++.+++++.++|+|||+|+... ....+..++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~ 82 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVG--GLFRNIKYN 82 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCC--CHHHHTTCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEECceecc--cccccccCH
Confidence 468999999999999999999999986 35667899999999999999977899999999761 233456778
Q ss_pred ccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCC---CCCCCCC-cchhhHHHHHHHHHhc
Q 005949 455 TDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED---TPNFTGS-FYSKTKAMVEELLKEY 529 (668)
Q Consensus 455 ~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~---~~~~~~~-~Y~~sK~~~E~~~~~~ 529 (668)
..++++|+.|+.+|+++|++.++ ++|++||+.+|+.....| +.|++ .+..|.+ .|+.+|.++|++++.+
T Consensus 83 ~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 156 (319)
T 4b8w_A 83 LDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP------IDETMIHNGPPHNSNFGYSYAKRMIDVQNRAY 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSS------BCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCC------ccccccccCCCCCCcchHHHHHHHHHHHHHHH
Confidence 88999999999999999999998 678889999998765554 44443 1444445 5999999999999998
Q ss_pred cCeeEeEEeeeecCCCCChhh------------HHHH----hhcccceeecC-----CCcccHhhHHHHHHHHHhcc---
Q 005949 530 DNVCTLRVRMPISSDLNNPRN------------FITK----ISRYNKVVNIP-----NSMTVLDELLPISIEMAKRN--- 585 (668)
Q Consensus 530 ~~~~~l~~~~~r~~~~~g~~~------------~~~~----~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~--- 585 (668)
.+..+++++++|++++|||.. |+.+ +..+......+ .+|+|++|+|++++.++++.
T Consensus 157 ~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 236 (319)
T 4b8w_A 157 FQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEV 236 (319)
T ss_dssp HHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCS
T ss_pred HHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccC
Confidence 777899999999999999962 4555 44444443332 28899999999999999874
Q ss_pred CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 586 LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 586 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+++||+++++.+|+.|+++.+++.+|.+.++...+.. ........+|++|+++.+| +..+++++|++++++
T Consensus 237 ~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~ 310 (319)
T 4b8w_A 237 EPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTK------SDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAW 310 (319)
T ss_dssp SCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTS------CCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred CceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCC------CcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 35699999999999999999999999987654333211 2223345799999999887 557899999999998
Q ss_pred cCC
Q 005949 664 PNK 666 (668)
Q Consensus 664 ~~~ 666 (668)
+.+
T Consensus 311 ~~~ 313 (319)
T 4b8w_A 311 FTD 313 (319)
T ss_dssp HHH
T ss_pred HHH
Confidence 853
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-36 Score=305.47 Aligned_cols=264 Identities=15% Similarity=0.150 Sum_probs=216.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc---------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|||+|+||||+||||++|++.|+++|++|. ++.+|++ .+++.+++++ +|+|||+|+.. .
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~--~d~Vih~a~~~---~ 74 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLND--VDAVVHLAATR---G 74 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTT--CSEEEECCCCC---C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcC--CCEEEEccccC---C
Confidence 568999999999999999999999999653 3467888 8899999985 49999999977 2
Q ss_pred ccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 447 VDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 447 ~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
.. ++...+++|+.++.+|+++|++.+++ +|++||+.+|+.....| .+|+.+..|.+.|+.+|.++|++
T Consensus 75 ~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~ 143 (311)
T 3m2p_A 75 SQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLP-------WNEKELPLPDLMYGVSKLACEHI 143 (311)
T ss_dssp SS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCS-------BCTTSCCCCSSHHHHHHHHHHHH
T ss_pred CC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCC-------CCCCCCCCCCchhHHHHHHHHHH
Confidence 22 77888999999999999999999985 88999999998766555 45556777789999999999999
Q ss_pred HHhccCeeEeEEeeeecCCCCChh--------hHHHHhhcccceeec-----CCCcccHhhHHHHHHHHHhcc-CCceee
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNI-----PNSMTVLDELLPISIEMAKRN-LRGIWN 591 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~~~~-~~g~~n 591 (668)
++.+.+..+++++++|++++|||. .++..+..+...... ..+++|++|+|++++.+++++ .+++||
T Consensus 144 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ 223 (311)
T 3m2p_A 144 GNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFN 223 (311)
T ss_dssp HHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEE
T ss_pred HHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEE
Confidence 999877779999999999999986 244445555544332 228999999999999999987 788999
Q ss_pred ecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc-cChHHHHHHHHhccCCC
Q 005949 592 FTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL-LSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 592 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~-~~~~~~l~~~~~~~~~~ 667 (668)
+++++.+|+.|+++.+++.+|.+..+...+.. .........+|++|+++.+| .+ .+++++|+++++++.+.
T Consensus 224 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 296 (311)
T 3m2p_A 224 IGSGDALTNYEVANTINNAFGNKDNLLVKNPN-----ANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGL 296 (311)
T ss_dssp ECCSCEECHHHHHHHHHHHTTCTTCEEECSSS-----BCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-
T ss_pred eCCCCcccHHHHHHHHHHHhCCCCcceecCCC-----CCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhc
Confidence 99999999999999999999987654433321 12233466899999999877 44 49999999999998764
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=303.16 Aligned_cols=307 Identities=19% Similarity=0.256 Sum_probs=215.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|+. ++++||||||+||||++|+++|+++ +++|+++.|..... ....+.... ...+++++.+|++|.+.+.+++
T Consensus 1 ~~~-~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 75 (337)
T 2c29_D 1 MGS-QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI-- 75 (337)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH--
T ss_pred CCC-CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH--
Confidence 554 4679999999999999999999999 67888777753210 111100000 0125789999999999999998
Q ss_pred CCCCEEEEcCccCCcccccCChH-HHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc-ccCCCCCCcCCCCCCCCCC---
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDAVVGNHEASQL--- 153 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~--- 153 (668)
.++|+|||+|+.... ...++. +.+++|+.|+.+++++|++.+.+++||++||.+ +|+....... .+|+.+.
T Consensus 76 ~~~d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~--~~E~~~~~~~ 151 (337)
T 2c29_D 76 KGCTGVFHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPV--YDESCWSDME 151 (337)
T ss_dssp TTCSEEEECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSE--ECTTCCCCHH
T ss_pred cCCCEEEEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcc--cCcccCCchh
Confidence 689999999986532 223443 588999999999999999876579999999987 4544322221 1333221
Q ss_pred ------CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHH--HHcCCCceeecCCCceEec
Q 005949 154 ------LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL--AMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 154 ------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 225 (668)
.|.++|+.+|.++|.+++.++++++++++++||++||||+..+. +...+... ...+... .+..+ ....|
T Consensus 152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~g~~~-~~~~~-~~~~~ 228 (337)
T 2c29_D 152 FCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS-MPPSLITALSPITGNEA-HYSII-RQGQF 228 (337)
T ss_dssp HHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS-CCHHHHHHTHHHHTCGG-GHHHH-TEEEE
T ss_pred hhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC-CCchHHHHHHHHcCCCc-ccccc-CCCCE
Confidence 13457999999999999998877799999999999999986432 11111111 1233322 12222 23459
Q ss_pred eeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCC-CCCcceEeccCCCCCCcccccChHHHHhCCCcc
Q 005949 226 LYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM-DPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~ 304 (668)
+|++|+|++++.+++++..++.|++++ ..+|+.|+++.+.+.++. ..+ ..+.. .+.......+|++|+++|||+|
T Consensus 229 i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--~~~~~-~~~~~~~~~~d~~k~~~lG~~p 304 (337)
T 2c29_D 229 VHLDDLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIP--TEFKG-VDENLKSVCFSSKKLTDLGFEF 304 (337)
T ss_dssp EEHHHHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCC--SCCTT-CCTTCCCCEECCHHHHHHTCCC
T ss_pred EEHHHHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCC--CCCCc-ccCCCccccccHHHHHHcCCCc
Confidence 999999999999998766667887764 568999999999998742 111 11111 1122345678999998899999
Q ss_pred cCCHHHHHHHHHHHHhhCC
Q 005949 305 RTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~ 323 (668)
+++++|+|+++++|+++..
T Consensus 305 ~~~l~e~l~~~~~~~~~~~ 323 (337)
T 2c29_D 305 KYSLEDMFTGAVDTCRAKG 323 (337)
T ss_dssp CCCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHcC
Confidence 9999999999999998763
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=311.42 Aligned_cols=271 Identities=18% Similarity=0.187 Sum_probs=212.6
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCc--------------------------ccccccccCChhHHHHHhhhcCCCEE
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIP--------------------------FEYGKGRLEDCSSLIADVQSVKPTHV 435 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~--------------------------v~~~~~D~~d~~~~~~~l~~~~~d~V 435 (668)
.||+|||||||||||++|+++|+++|+. +.++.+|++|++++.+++++.++|+|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 102 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI 102 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence 3579999999999999999999999932 23457899999999999998778999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
||+|+.. ....+..++..++++|+.++.+|+++|++.++ ++|++||+.||+..... . ...|+.+..|.+.
T Consensus 103 ih~A~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~-----~-~~~E~~~~~p~~~ 173 (346)
T 4egb_A 103 VNFAAES---HVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKT-----G-RFTEETPLAPNSP 173 (346)
T ss_dssp EECCCCC------------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSS-----C-CBCTTSCCCCCSH
T ss_pred EECCccc---chhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcC-----C-CcCCCCCCCCCCh
Confidence 9999987 45556678889999999999999999999998 58899999999875322 1 2556667778899
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecC-----CCcccHhhHHHHHHHH
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTVLDELLPISIEM 581 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~ 581 (668)
|+.+|..+|++++.+.+..+++++++|++++|||.. ++..+..+......+ .+|+|++|+|++++.+
T Consensus 174 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 253 (346)
T 4egb_A 174 YSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVV 253 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHH
Confidence 999999999999998777799999999999999962 455555555443332 2899999999999999
Q ss_pred Hhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHH
Q 005949 582 AKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLI 658 (668)
Q Consensus 582 ~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~ 658 (668)
++++ .+++||+++++.+|+.|+++.+++.+|.+.+.+.... ..........+|++|+++.+| +..+++++|.
T Consensus 254 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~ 328 (346)
T 4egb_A 254 LHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVT-----DRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQ 328 (346)
T ss_dssp HHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEEC-----C--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred HhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccC-----CCCCCcceeeccHHHHHHHcCCCCCCCHHHHHH
Confidence 9876 5669999999999999999999999998764221110 112223345789999998777 3459999999
Q ss_pred HHHhccCC
Q 005949 659 KYVFEPNK 666 (668)
Q Consensus 659 ~~~~~~~~ 666 (668)
++++++.+
T Consensus 329 ~~~~~~~~ 336 (346)
T 4egb_A 329 ETVQWYEK 336 (346)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998854
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=299.18 Aligned_cols=299 Identities=14% Similarity=0.119 Sum_probs=229.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCC-----CEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPE-----YKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
+|+|||||||||||++|++.|+++ + ++|++++|...... ....+++++.+|+.|.+.+.+++...+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcCC
Confidence 368999999999999999999998 5 89999998653221 123478999999999999999985433
Q ss_pred -CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEE-------EEcCccccCCCCCCcCCCCCCCC
Q 005949 81 -IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFI-------HVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 81 -~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v-------~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
+|+|||+||... .++...+++|+.++.+++++|++.+ .+++|| |+||.++||...... .+.+|++
T Consensus 72 ~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~-~~~~E~~ 145 (364)
T 2v6g_A 72 DVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHD-PPYTEDL 145 (364)
T ss_dssp TCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCC-SSBCTTS
T ss_pred CCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCC-CCCCccc
Confidence 999999999753 4677899999999999999999872 388998 799999999853111 1235666
Q ss_pred CCCC-CChhHHHHHHHHHHHHHHHHhcC-CCEEEEeeCceeCCCCCC--CChHHH-HHHHH--HcCCCceeecCCC---c
Q 005949 152 QLLP-TNPYSATKAGAEMLVMAYGRSYG-LPVITTRGNNVYGPNQFP--EKLIPK-FILLA--MRGLPLPIHGDGS---N 221 (668)
Q Consensus 152 ~~~p-~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~--~~~~~~-~~~~~--~~~~~~~~~~~~~---~ 221 (668)
+..| .+.| ..+|.+++.++++++ ++++++||++||||+... ..+++. +.+.+ ..+.++.+++++. .
T Consensus 146 ~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 221 (364)
T 2v6g_A 146 PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDG 221 (364)
T ss_dssp CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHS
T ss_pred cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccc
Confidence 5554 6678 458999988887676 999999999999998743 223444 33434 3677777667663 4
Q ss_pred eEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCcccHHHHHHHHHHHhCCCCCc---ceEec-----------------
Q 005949 222 VRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKERRVIDVAKDICKLFSMDPET---SIKFV----------------- 280 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~----------------- 280 (668)
..+++|++|+|++++.+++++. .+++||+++++++|+.|+++.+.+.+|.+... .+...
T Consensus 222 ~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 301 (364)
T 2v6g_A 222 YSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVR 301 (364)
T ss_dssp CBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHH
Confidence 4778889999999999998764 57799999999999999999999999976431 11110
Q ss_pred --cCCCCC--C------------cc-cccChHHHHhCCCcccCCHHHHHHHHHHHHhhCC
Q 005949 281 --ENRPFN--D------------QR-YFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 281 --~~~~~~--~------------~~-~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~~~ 323 (668)
...+.. . .. ..+|++|+++|||+|.++++++|+++++||+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 302 ENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp HTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred HhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 001110 0 23 4789999988999999999999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=301.12 Aligned_cols=302 Identities=19% Similarity=0.162 Sum_probs=227.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEE-EccCCCHHHHHHHhccC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFV-KGDIASADLVNFLLITE 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~-~~Dl~d~~~~~~~~~~~ 79 (668)
+++|+|||||||||||+++++.|+++ +++|++++|.... ...+... ....+++++ .+|++|.+.+.+++ .
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~ 82 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASK--LANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--K 82 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--T
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCccc--HHHHHHHhhccCCCceEEEEecCCcChHHHHHHH--c
Confidence 45689999999999999999999999 6889988885321 1111000 012468888 79999999988888 5
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcC-CCCCCCC-------
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAV-VGNHEAS------- 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~-~~~~e~~------- 151 (668)
++|+|||+||..... .++...+++|+.++.+++++|.+...+++||++||..+|+....... .+.+|++
T Consensus 83 ~~d~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~ 159 (342)
T 1y1p_A 83 GAAGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID 159 (342)
T ss_dssp TCSEEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred CCCEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhh
Confidence 899999999976532 46778999999999999999985334899999999999865422100 1123433
Q ss_pred ---------CCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC---ChHHHHHHHHHcCCCceeec
Q 005949 152 ---------QLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE---KLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 152 ---------~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~ 217 (668)
+..|.+.|+.+|..+|.+++.+++++ +++++++||+++|||...+. ..++.++..+..++...+.+
T Consensus 160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1y1p_A 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA 239 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccc
Confidence 23355789999999999999988765 68899999999999986543 27888888888888776656
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcCCC-CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHH
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKGEV-GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~~~-~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 296 (668)
++ +.++|+|++|+|++++.+++.+.. ++.+ ++++..+|+.|+++.+.+.+|... ..... + +.......+|++|
T Consensus 240 ~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~~-~~~~~-~--~~~~~~~~~d~~k 313 (342)
T 1y1p_A 240 LM-PPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSKT-FPADF-P--DQGQDLSKFDTAP 313 (342)
T ss_dssp TC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTSC-CCCCC-C--CCCCCCCEECCHH
T ss_pred cC-CcCCEeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCcc-CCCCC-C--ccccccccCChHH
Confidence 55 678999999999999999987543 4444 455678999999999999998641 11111 1 1112236789999
Q ss_pred HHh-CCC---cccCCHHHHHHHHHHHHh
Q 005949 297 LTS-LGW---SERTIWEEGLRKTIEWYT 320 (668)
Q Consensus 297 ~~~-lG~---~~~~~~~~~l~~~~~~~~ 320 (668)
+++ ||| .+..+++++|+++++||+
T Consensus 314 ~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 314 SLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp HHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred HHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 974 776 566799999999999875
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-36 Score=305.69 Aligned_cols=305 Identities=19% Similarity=0.229 Sum_probs=211.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
+|+|||||||||||++|++.|+++ +++|+++.|..... ....+.......+++++.+|++|.+.+.+++ .++|+|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~V 84 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI--AGCDFV 84 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH--TTCSEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH--cCCCEE
Confidence 579999999999999999999999 67888766643211 1110000001246889999999999999888 679999
Q ss_pred EEcCccCCcccccCCh-HHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc-ccCCCCCCcCCCCCCCCC--------CC
Q 005949 85 MHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDAVVGNHEASQ--------LL 154 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~--------~~ 154 (668)
||+|+.... ...++ .+.+++|+.|+.+++++|++.+.+++||++||.+ +|+..........+|+.+ ..
T Consensus 85 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 162 (338)
T 2rh8_A 85 FHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAK 162 (338)
T ss_dssp EEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------
T ss_pred EEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccC
Confidence 999997532 22333 3488999999999999999875589999999987 443221110011233321 11
Q ss_pred CC-ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceeecC------CCceEec
Q 005949 155 PT-NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGD------GSNVRSY 225 (668)
Q Consensus 155 p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 225 (668)
|. ..|+.+|.++|.+++.++++++++++++||++||||+.... ..+..+. ....+.... .+. +...++|
T Consensus 163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~ 240 (338)
T 2rh8_A 163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFL-INGMKGMQMLSGSVSI 240 (338)
T ss_dssp CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHH-HHHHHHHHHHHSSEEE
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-cccccccccccCcccE
Confidence 22 25999999999999998877799999999999999976432 1222221 123333221 111 1123489
Q ss_pred eeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCC-CCCcceEeccCCCCCCcccccChHHHHhCCCcc
Q 005949 226 LYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM-DPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~ 304 (668)
+|++|+|++++.+++.+..++.||+++ ..+|+.|+++.+.+.++. +.+ ..+.+ .+. .....+|++|+++|||+|
T Consensus 241 i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~--~~~~~-~~~-~~~~~~d~~k~~~lG~~p 315 (338)
T 2rh8_A 241 AHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVP--TDFGD-FPP-KSKLIISSEKLVKEGFSF 315 (338)
T ss_dssp EEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCC--CCCTT-SCS-SCSCCCCCHHHHHHTCCC
T ss_pred EEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCC--CCCCC-CCc-CcceeechHHHHHhCCCC
Confidence 999999999999998766667898875 568999999999998763 211 11111 111 123678999998899999
Q ss_pred cCCHHHHHHHHHHHHhhCC
Q 005949 305 RTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~ 323 (668)
+++++|+|+++++|+++..
T Consensus 316 ~~~l~~gl~~~~~~~~~~~ 334 (338)
T 2rh8_A 316 KYGIEEIYDESVEYFKAKG 334 (338)
T ss_dssp SCCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHcC
Confidence 9999999999999998763
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=304.26 Aligned_cols=268 Identities=15% Similarity=0.174 Sum_probs=212.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
||+||||||+||||++|++.|+++|+.+ .++.+|++| +++.++++++ |+|||+|+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~--d~vih~a~~~--- 74 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGA--EEVWHIAANP--- 74 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTC--SEEEECCCCC---
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCC--CEEEECCCCC---
Confidence 6799999999999999999999999633 345689998 8888888855 9999999976
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
....+..++...+++|+.++.+|+++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|+.+|..+|+
T Consensus 75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~-------~~E~~~~~~~~~Y~~sK~~~e~ 147 (313)
T 3ehe_A 75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIP-------TPEDYPTHPISLYGASKLACEA 147 (313)
T ss_dssp CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCC-------CCCCCCCCCCCHHHHHHHHHHH
Confidence 45666778889999999999999999999988 788999999998765554 5666677788999999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChh-------hHHHHhhccccee-ecC-----CCcccHhhHHHHHHHHHhcc-CCcee
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVV-NIP-----NSMTVLDELLPISIEMAKRN-LRGIW 590 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~-~~~-----~~~~~v~D~a~~~~~~~~~~-~~g~~ 590 (668)
+++.+.+.++++++++|++++|||. .++..+..+.... ..+ .+|+|++|+|++++.+++.. .+++|
T Consensus 148 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 227 (313)
T 3ehe_A 148 LIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIF 227 (313)
T ss_dssp HHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEE
T ss_pred HHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceE
Confidence 9999877779999999999999996 3555555553322 222 28999999999999999854 66899
Q ss_pred eecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCC
Q 005949 591 NFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 591 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~ 666 (668)
|+++++.+|+.|+++.+++.+|.+..+...+.. ...........+|++|++++++ +..+++++|+++++++.+
T Consensus 228 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~ 301 (313)
T 3ehe_A 228 NIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGD---RGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVE 301 (313)
T ss_dssp ECCCSCCEEHHHHHHHHHHHTTCCCEEEEC---------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred EECCCCCeeHHHHHHHHHHHhCCCCceEECCCc---cCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999987654333211 1112233456789999987655 446999999999998853
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=305.32 Aligned_cols=269 Identities=18% Similarity=0.205 Sum_probs=214.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
||||||||+||||++|++.|+++|++| .++.+|++|.+ +.+.+++ |+|||+|+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~---d~vih~A~~~--- 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG---DVVFHFAANP--- 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC---SEEEECCSSC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC---CEEEECCCCC---
Confidence 689999999999999999999999865 23567888877 6666664 9999999976
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
....+..++...+++|+.++.+++++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|+.+|..+|+
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~-------~~e~~~~~p~~~Y~~sK~~~e~ 146 (312)
T 3ko8_A 74 EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIP-------TPEEEPYKPISVYGAAKAAGEV 146 (312)
T ss_dssp SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCC-------CCCCCCCCCCChHHHHHHHHHH
Confidence 56667788889999999999999999999998 788999999998765554 5566677788999999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChh-------hHHHHhhccccee-ecC-----CCcccHhhHHHHHHHHHhc-----cC
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPR-------NFITKISRYNKVV-NIP-----NSMTVLDELLPISIEMAKR-----NL 586 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~-~~~-----~~~~~v~D~a~~~~~~~~~-----~~ 586 (668)
+++.+.+..+++++++|++++|||. .++..+..+.... ..+ .+++|++|+|++++.++++ ..
T Consensus 147 ~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 226 (312)
T 3ko8_A 147 MCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226 (312)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence 9999877779999999999999996 3555555553322 222 2899999999999999987 25
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhcc
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~ 664 (668)
+++||+++++.+|+.|+++.+.+.+|.+..+...+................+|++|+++.+| +..+++++|+++++++
T Consensus 227 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~ 306 (312)
T 3ko8_A 227 FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDL 306 (312)
T ss_dssp EEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 67999999999999999999999999887655444322111123333456889999987777 3458999999999987
Q ss_pred CC
Q 005949 665 NK 666 (668)
Q Consensus 665 ~~ 666 (668)
.+
T Consensus 307 ~~ 308 (312)
T 3ko8_A 307 AK 308 (312)
T ss_dssp HH
T ss_pred Hh
Confidence 53
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=294.71 Aligned_cols=302 Identities=20% Similarity=0.246 Sum_probs=210.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcC-CCcc-CCccccCCC-cCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK-LDYC-SNLKNLIPS-KASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r-~~~~-~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+|+|||||||||||++|++.|+++ +++|+++.| .... .....+... ....+++++.+|++|.+.+.+++ .++|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 76 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI--EGCV 76 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH--TTCS
T ss_pred CCEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH--cCCC
Confidence 478999999999999999999999 678888776 3211 111111000 00124788899999999999998 6899
Q ss_pred EEEEcCccCCcccccCCh-HHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcccc-CCCCCCcCCCCCCCCCC-------
Q 005949 83 TIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVY-GETDEDAVVGNHEASQL------- 153 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vy-g~~~~~~~~~~~e~~~~------- 153 (668)
+|||+|+... ....++ ...+++|+.|+.+++++|.+...+++||++||..++ +......+ .+|+.+.
T Consensus 77 ~vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~--~~e~~~~~~~~~~~ 152 (322)
T 2p4h_X 77 GIFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDV--LDESDWSDVDLLRS 152 (322)
T ss_dssp EEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSE--ECTTCCCCHHHHHH
T ss_pred EEEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCee--cCCccccchhhhcc
Confidence 9999997542 222333 358899999999999999987238999999998754 33221111 2333321
Q ss_pred -CCCC-hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 154 -LPTN-PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 154 -~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
.|.. .|+.+|.++|.++++++++++++++++||++||||+.... ..+..+. ....+....+ +. ..++|+|++
T Consensus 153 ~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~-~~~~g~~~~~-~~--~~~~~i~v~ 228 (322)
T 2p4h_X 153 VKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKAL-VLVLGKKEQI-GV--TRFHMVHVD 228 (322)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHT-HHHHSCGGGC-CE--EEEEEEEHH
T ss_pred cCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHH-HHHhCCCccC-cC--CCcCEEEHH
Confidence 2333 6999999999999998877799999999999999976432 1121121 2233433322 22 334899999
Q ss_pred HHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEe-ccCCCCCCcccccChHHHHhCCCcccCCH
Q 005949 230 DVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKF-VENRPFNDQRYFLDDQKLTSLGWSERTIW 308 (668)
Q Consensus 230 D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~k~~~lG~~~~~~~ 308 (668)
|+|++++.+++.+...+.|| +++..+|+.|+++.+.+.++..+. .... ....+ ......+|++|+++|||+|++++
T Consensus 229 Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~-~~~~~~~~~~-~~~~~~~d~~k~~~lG~~p~~~~ 305 (322)
T 2p4h_X 229 DVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQI-LTVDELKEIK-GARLPDLNTKKLVDAGFDFKYTI 305 (322)
T ss_dssp HHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCC-CCTTTTTTCC-CEECCEECCHHHHHTTCCCCCCH
T ss_pred HHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCC-CCCccccCCC-CCcceecccHHHHHhCCccCCCH
Confidence 99999999998765555799 557889999999999988742111 0000 01111 11346789999988999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005949 309 EEGLRKTIEWYTQN 322 (668)
Q Consensus 309 ~~~l~~~~~~~~~~ 322 (668)
+++|+++++|++++
T Consensus 306 ~~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 306 EDMFDDAIQCCKEK 319 (322)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999864
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=291.85 Aligned_cols=279 Identities=14% Similarity=0.091 Sum_probs=213.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||++|++.|+++ +++|++++|.... . .+..| +...+.+ .++|+|||
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~------------~---~~~~~----~~~~~~l--~~~d~vih 57 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGP------------G---RITWD----ELAASGL--PSCDAAVN 57 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCT------------T---EEEHH----HHHHHCC--CSCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCc------------C---eeecc----hhhHhhc--cCCCEEEE
Confidence 68999999999999999999999 6889888885321 1 12222 2233344 68999999
Q ss_pred cCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 87 FAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 87 ~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
+|+...... .......+++.|+.+|.+|+++++..+ ...+||++||+++||....... +|+++..|.+.|+.
T Consensus 58 la~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~---~E~~p~~~~~~~~~ 134 (298)
T 4b4o_A 58 LAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEY---DEDSPGGDFDFFSN 134 (298)
T ss_dssp CCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCB---CTTCCCSCSSHHHH
T ss_pred eccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcc---cccCCccccchhHH
Confidence 998643221 122345688999999999999998876 2456899999999998876554 67788888888988
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
.+...|.... ....+++++++|++.||||++ ..+..+......+... ..+++.++++|||++|+++++..++++
T Consensus 135 ~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~---~~~~~~~~~~~~~~~~-~~g~g~~~~~~ihv~Dva~a~~~~~~~ 208 (298)
T 4b4o_A 135 LVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG---GAMGHMLLPFRLGLGG-PIGSGHQFFPWIHIGDLAGILTHALEA 208 (298)
T ss_dssp HHHHHHHHHC--CSSSSSEEEEEEECEEECTTS---HHHHHHHHHHHTTCCC-CBTTSCSBCCEEEHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--hhccCCceeeeeeeeEEcCCC---CchhHHHHHHhcCCcc-eecccCceeecCcHHHHHHHHHHHHhC
Confidence 8888876543 345589999999999999976 5666777666666544 458999999999999999999999999
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC--------CCCCcccccChHHHHhCCCcccC-CHHHHH
Q 005949 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR--------PFNDQRYFLDDQKLTSLGWSERT-IWEEGL 312 (668)
Q Consensus 242 ~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~lG~~~~~-~~~~~l 312 (668)
+...++||+++++++|+.|+++.+++.+|++....++....+ ........++++|++++||++++ +++++|
T Consensus 209 ~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al 288 (298)
T 4b4o_A 209 NHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAAL 288 (298)
T ss_dssp TTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHH
T ss_pred CCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHH
Confidence 888889999999999999999999999998643221110000 00012345778999999999995 799999
Q ss_pred HHHHH
Q 005949 313 RKTIE 317 (668)
Q Consensus 313 ~~~~~ 317 (668)
++.++
T Consensus 289 ~~l~~ 293 (298)
T 4b4o_A 289 KEIAE 293 (298)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99887
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=306.74 Aligned_cols=270 Identities=17% Similarity=0.151 Sum_probs=217.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------------cccccccCChhHHHHHhhhcCCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------------EYGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------------~~~~~D~~d~~~~~~~l~~~~~d 433 (668)
+|+|||||||||||++|++.|+++|++| .++.+|++|++++.++++++ |
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 102 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV--D 102 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC--S
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC--C
Confidence 4799999999999999999999999865 23567999999999999854 9
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
+|||+||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||+.+|+.....| .+|+.+..|.
T Consensus 103 ~Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~~p~ 172 (351)
T 3ruf_A 103 HVLHQAALG---SVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALP-------KVEENIGNPL 172 (351)
T ss_dssp EEEECCCCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS-------BCTTCCCCCC
T ss_pred EEEECCccC---CcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCC-------CccCCCCCCC
Confidence 999999976 55666778888999999999999999999998 788999999998765554 5566677788
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh------------hHHHHhhcccceeecC-----CCcccHhhHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIP-----NSMTVLDELL 575 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~-----~~~~~v~D~a 575 (668)
+.|+.+|..+|++++.+.+..+++++++|++++|||. .++..+..+......+ .+|+|++|+|
T Consensus 173 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 252 (351)
T 3ruf_A 173 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVI 252 (351)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHH
Confidence 9999999999999999877779999999999999996 2444555565544332 2899999999
Q ss_pred HHHHHHHhc---cCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--Cc
Q 005949 576 PISIEMAKR---NLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--EL 650 (668)
Q Consensus 576 ~~~~~~~~~---~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~ 650 (668)
++++.++.+ ..+++||+++++.+|+.|+++.+++.+|.+..+...+.. .............+|++|+++.+| +.
T Consensus 253 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 331 (351)
T 3ruf_A 253 QMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK-YREFRSGDVRHSQADVTKAIDLLKYRPN 331 (351)
T ss_dssp HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----E-EECCCTTCCSBCCBCCHHHHHHHCCCCC
T ss_pred HHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccc-ccCCCCCccceeeeCHHHHHHHhCCCCC
Confidence 999999986 267899999999999999999999999984432222111 001112223456889999999777 34
Q ss_pred cChHHHHHHHHhccC
Q 005949 651 LSIKDSLIKYVFEPN 665 (668)
Q Consensus 651 ~~~~~~l~~~~~~~~ 665 (668)
.+++++|+++++++.
T Consensus 332 ~~~~~~l~~~~~~~~ 346 (351)
T 3ruf_A 332 IKIREGLRLSMPWYV 346 (351)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 599999999999874
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=294.98 Aligned_cols=269 Identities=20% Similarity=0.179 Sum_probs=214.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccccc---ccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccccccee
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYG---KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIR 459 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~---~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~ 459 (668)
-|+|||||||||||+++++.|+++|++|..+ .+|++|.+++.+++++.++|+|||+||.. ....+..++...++
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~~~~~~~~~~~~~ 88 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT---AVDKCEEQYDLAYK 88 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHCHHHHHH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccC---CHHHHhcCHHHHHH
Confidence 3799999999999999999999999988655 47999999999999876779999999976 44445677888999
Q ss_pred hhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEee
Q 005949 460 TNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRM 539 (668)
Q Consensus 460 ~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~ 539 (668)
+|+.++.+++++|++.++++|++||..+|+.....| .+|+.+..|.+.|+.+|..+|++++.+.. ++++
T Consensus 89 ~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~ 157 (292)
T 1vl0_A 89 INAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP-------ITEFDEVNPQSAYGKTKLEGENFVKALNP----KYYI 157 (292)
T ss_dssp HHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSC-------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS----SEEE
T ss_pred HHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCC-------CCCCCCCCCccHHHHHHHHHHHHHHhhCC----CeEE
Confidence 999999999999999988999999999998765444 45555667779999999999999998753 5788
Q ss_pred eecCCCCChh-hHHH----Hhhcccceeec---CCCcccHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhc
Q 005949 540 PISSDLNNPR-NFIT----KISRYNKVVNI---PNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYI 611 (668)
Q Consensus 540 ~r~~~~~g~~-~~~~----~~~~~~~~~~~---~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~ 611 (668)
+|++++|||. .++. .+..+...... ..+++|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+
T Consensus 158 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~ 237 (292)
T 1vl0_A 158 VRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLT 237 (292)
T ss_dssp EEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred EeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcCCCcEEEecCCCCccHHHHHHHHHHHh
Confidence 9999999884 2333 33334333222 23899999999999999987778899999999999999999999999
Q ss_pred CCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCC
Q 005949 612 NPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 612 g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~ 666 (668)
|.+..+..++..... ..........+|++|+++.+| .+++|+++|+++++++++
T Consensus 238 g~~~~~~~~~~~~~~-~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 238 GIDVKVTPCTTEEFP-RPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQM 292 (292)
T ss_dssp CCCCEEEEECSTTSC-CSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHTC
T ss_pred CCCCceeeccccccC-cccCCCccccccHHHHHHHcCCCCCCHHHHHHHHHHHhcC
Confidence 987654433322110 001122345789999999877 556999999999999864
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=300.50 Aligned_cols=273 Identities=17% Similarity=0.195 Sum_probs=215.2
Q ss_pred CCCCcEEEEEcCCcchhHHHHHHHHHcCCccc--------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 380 RKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 380 ~~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
.+.+|+||||||+||||++++++|+++|++|. ++.+|++|++++.+++++.++|+|||+||..
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~--- 85 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS--- 85 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC---
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc---
Confidence 44568999999999999999999999998763 3467999999999999986789999999977
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeec--CCCCCCCCCCCCCCCCCCCCCCcchhhHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYD--AAHPEGSGIGYKEEDTPNFTGSFYSKTKAM 521 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~--~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~ 521 (668)
....+..++...+++|+.|+.+++++|++. ++ ++|++||..+|+.. ...| .+|+.+..|.+.|+.+|..
T Consensus 86 ~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~ 158 (321)
T 2pk3_A 86 SVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESP-------VSEENQLRPMSPYGVSKAS 158 (321)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCS-------BCTTSCCBCCSHHHHHHHH
T ss_pred chhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCC-------CCCCCCCCCCCccHHHHHH
Confidence 444455678889999999999999999886 45 78899999999764 3333 4556666778999999999
Q ss_pred HHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhc---c--cceeecC-----CCcccHhhHHHHHHHHHh
Q 005949 522 VEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISR---Y--NKVVNIP-----NSMTVLDELLPISIEMAK 583 (668)
Q Consensus 522 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~---~--~~~~~~~-----~~~~~v~D~a~~~~~~~~ 583 (668)
+|++++.+.+.++++++++|++++|||.. ++..+.. + ......+ .+++|++|+|++++.+++
T Consensus 159 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~ 238 (321)
T 2pk3_A 159 VGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ 238 (321)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHh
Confidence 99999998766799999999999999962 3444443 3 2222222 278999999999999998
Q ss_pred cc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc-cChHHHHHHH
Q 005949 584 RN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL-LSIKDSLIKY 660 (668)
Q Consensus 584 ~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~-~~~~~~l~~~ 660 (668)
++ .+++||+++++.+|+.|+++.+.+.+|.+.++...|.. ..........+|++|+++.+| .+ .+++++|.++
T Consensus 239 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~----~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~ 314 (321)
T 2pk3_A 239 YGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ----LRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEI 314 (321)
T ss_dssp HCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG----CCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred CCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc----CCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHH
Confidence 76 57799999999999999999999999987654433211 111223456889999999877 44 4999999999
Q ss_pred HhccCC
Q 005949 661 VFEPNK 666 (668)
Q Consensus 661 ~~~~~~ 666 (668)
++++.+
T Consensus 315 ~~~~~~ 320 (321)
T 2pk3_A 315 LQSYRQ 320 (321)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 998754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=303.82 Aligned_cols=268 Identities=13% Similarity=0.121 Sum_probs=216.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
+|+||||||+||||+++++.|+++|++| .++.+|++|++++.++++..++|+|||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 4799999999999999999999999865 234679999999999999777899999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
+||.. .......++...++.|+.++.+++++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|+
T Consensus 85 ~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~-------~~e~~~~~~~~~Y~ 154 (341)
T 3enk_A 85 FAALK---AVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSP-------IDETFPLSATNPYG 154 (341)
T ss_dssp CCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSS-------BCTTSCCBCSSHHH
T ss_pred Ccccc---ccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCC-------CCCCCCCCCCChhH
Confidence 99977 44555677788899999999999999999987 788999999997765544 56666777889999
Q ss_pred hhHHHHHHHHHhccCeeE-eEEeeeecCCCCChh--------------h---HHHHhhccc--ceeec-----------C
Q 005949 517 KTKAMVEELLKEYDNVCT-LRVRMPISSDLNNPR--------------N---FITKISRYN--KVVNI-----------P 565 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~~~-l~~~~~r~~~~~g~~--------------~---~~~~~~~~~--~~~~~-----------~ 565 (668)
.||.++|++++.+....+ ++++++|++++|||. . ++.+...+. ..... .
T Consensus 155 ~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 234 (341)
T 3enk_A 155 QTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGV 234 (341)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCE
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCee
Confidence 999999999998865555 999999999999983 2 222323222 22111 1
Q ss_pred CCcccHhhHHHHHHHHHhc----cCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 566 NSMTVLDELLPISIEMAKR----NLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 566 ~~~~~v~D~a~~~~~~~~~----~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
.+|+|++|+|++++.++++ ..+++||+++++.+|+.|+++.+++.+|.+.++...+. .........+|++
T Consensus 235 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~ 308 (341)
T 3enk_A 235 RDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR------RPGDVAECYANPA 308 (341)
T ss_dssp ECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC------CTTCCSEECBCCH
T ss_pred EeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC------CCCCccccccCHH
Confidence 2899999999999999986 36789999999999999999999999998866443321 1223335578999
Q ss_pred HHHhhcC--CccChHHHHHHHHhccCC
Q 005949 642 KLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 642 k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
|+++.+| +..+++++|+++++|+++
T Consensus 309 k~~~~lG~~p~~~l~~~l~~~~~~~~~ 335 (341)
T 3enk_A 309 AAAETIGWKAERDLERMCADHWRWQEN 335 (341)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence 9998777 447999999999999854
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=307.95 Aligned_cols=274 Identities=13% Similarity=0.151 Sum_probs=215.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHc-CCcc-------------------cccccccC-ChhHHHHHhhhcCCCEEEEccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKE-GIPF-------------------EYGKGRLE-DCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~-g~~v-------------------~~~~~D~~-d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
+||+||||||+||||++|++.|+++ |++| .++.+|++ |.+.+.++++++ |+|||+|+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~--d~Vih~A~ 100 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKC--DVILPLVA 100 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHC--SEEEECBC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccC--CEEEEcCc
Confidence 3579999999999999999999999 8754 45678999 899999999876 99999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC------CCCCc
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN------FTGSF 514 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~------~~~~~ 514 (668)
.. ....+..++...+++|+.++.+|+++|++.+.++|++||+.||+.....| +.|++.+. .|.+.
T Consensus 101 ~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~------~~e~~~~~~~~p~~~p~~~ 171 (372)
T 3slg_A 101 IA---TPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQ------FDPDASALTYGPINKPRWI 171 (372)
T ss_dssp CC---CHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSS------BCTTTCCEEECCTTCTTHH
T ss_pred cc---cHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCC------CCccccccccCCCCCCCCc
Confidence 87 45555678888999999999999999999987888999999998765544 45555331 46678
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh----------------hHHHHhhcccceeecC-----CCcccHhh
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIP-----NSMTVLDE 573 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~-----~~~~~v~D 573 (668)
|+.+|.++|++++.+.+. +++++++|++++|||. .++..+..+......+ .+++|++|
T Consensus 172 Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 250 (372)
T 3slg_A 172 YACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDD 250 (372)
T ss_dssp HHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHH
T ss_pred HHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHH
Confidence 999999999999998766 9999999999999986 2444555555544332 28999999
Q ss_pred HHHHHHHHHhcc----CCceeeecCC-CccCHHHHHHHHHhhcCCCCCCCCCCHHHh---------hhhhccCCCCCccC
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNP-GVVSHNEILEMYKKYINPEFKWVNFTLEEQ---------AKVIVAPRSNNEMD 639 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~ld 639 (668)
+|++++.+++++ .+++||++++ +.+|+.|+++.+++.+|.+..+...+.... ............+|
T Consensus 251 va~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 330 (372)
T 3slg_A 251 GISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPK 330 (372)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBC
T ss_pred HHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecC
Confidence 999999999875 4789999995 899999999999999998765432221000 00000122355789
Q ss_pred hhHHHhhcC--CccChHHHHHHHHhccCCC
Q 005949 640 ASKLKKEFP--ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 640 ~~k~~~~~g--~~~~~~~~l~~~~~~~~~~ 667 (668)
++|+++.+| +..+++++|+++++++.++
T Consensus 331 ~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 331 IENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp CHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 999999777 4459999999999998653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=297.45 Aligned_cols=266 Identities=18% Similarity=0.202 Sum_probs=212.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
||||||||+||||++++++|+++|++|. ++.+|++|++++.++++..++|+|||+|+..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~--- 77 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA--- 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC---
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc---
Confidence 6899999999999999999999998652 3457899999999999866779999999976
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecc-eeEee-cCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATG-CIFEY-DAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~-~vy~~-~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
....+..++...+++|+.|+.+++++|++.++ ++|++||. .+|+. ....| .+|+.+..|.+.|+.||..+
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~ 150 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGER-------AEETWPPRPKSPYAASKAAF 150 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCC-------BCTTSCCCCCSHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCC-------cCCCCCCCCCChHHHHHHHH
Confidence 34445567788899999999999999999987 78888888 88875 33333 44555666778999999999
Q ss_pred HHHHHhccCeeEeEEeeeecCCCCChhh-----------HHHHhhcccceeec-----C-----CCcccHhhHHHHHHHH
Q 005949 523 EELLKEYDNVCTLRVRMPISSDLNNPRN-----------FITKISRYNKVVNI-----P-----NSMTVLDELLPISIEM 581 (668)
Q Consensus 523 E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----------~~~~~~~~~~~~~~-----~-----~~~~~v~D~a~~~~~~ 581 (668)
|++++.+.+..+++++++|++++|||.. ++.++.++...... + .+|+|++|+|++++.+
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 230 (311)
T 2p5y_A 151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230 (311)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHH
Confidence 9999988766789999999999999852 33444444443222 2 2899999999999999
Q ss_pred HhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHH
Q 005949 582 AKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIK 659 (668)
Q Consensus 582 ~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~ 659 (668)
++++ +++||+++++.+|+.|+++.+++.+|.+.++...+.. ..+.....+|++|+++ +| +..+++++|++
T Consensus 231 ~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~-lg~~p~~~~~~~l~~ 302 (311)
T 2p5y_A 231 LFSL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR------PGDLERSVLSPLKLMA-HGWRPKVGFQEGIRL 302 (311)
T ss_dssp HHHC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC------TTCCSBCCBCCHHHHT-TTCCCSSCHHHHHHH
T ss_pred HhCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC------ccchhhccCCHHHHHH-CCCCCCCCHHHHHHH
Confidence 9875 8899999999999999999999999987654333211 1223456789999999 77 44699999999
Q ss_pred HHhccCCC
Q 005949 660 YVFEPNKK 667 (668)
Q Consensus 660 ~~~~~~~~ 667 (668)
+++|+.++
T Consensus 303 ~~~~~~~~ 310 (311)
T 2p5y_A 303 TVDHFRGA 310 (311)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 99988653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=296.69 Aligned_cols=268 Identities=17% Similarity=0.183 Sum_probs=211.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc-------cccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------GKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTD 456 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 456 (668)
|||+||||+||||+++++.|+ +|++|.. +.+|++|++++.+++++.++|+|||+||.. ....+..++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~---~~~~~~~~~~~ 76 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT---AVDKAESEPEL 76 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccC---CHhhhhcCHHH
Confidence 689999999999999999999 8998743 458999999999999986779999999976 44445677888
Q ss_pred ceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeE
Q 005949 457 TIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLR 536 (668)
Q Consensus 457 ~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~ 536 (668)
.+++|+.++.+++++|++.++++|++||..+|+.....| ..|+.+..|.+.|+.+|..+|++++.+.. +
T Consensus 77 ~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~----~ 145 (299)
T 1n2s_A 77 AQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP-------WQETDATSPLNVYGKTKLAGEKALQDNCP----K 145 (299)
T ss_dssp HHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCC-------BCTTSCCCCSSHHHHHHHHHHHHHHHHCS----S
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCC-------CCCCCCCCCccHHHHHHHHHHHHHHHhCC----C
Confidence 999999999999999999999999999999998765444 45555667779999999999999998754 7
Q ss_pred EeeeecCCCCChh--hH----HHHhhcccceeecC---CCcccHhhHHHHHHHHHhcc-----CCceeeecCCCccCHHH
Q 005949 537 VRMPISSDLNNPR--NF----ITKISRYNKVVNIP---NSMTVLDELLPISIEMAKRN-----LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 537 ~~~~r~~~~~g~~--~~----~~~~~~~~~~~~~~---~~~~~v~D~a~~~~~~~~~~-----~~g~~ni~~~~~~s~~e 602 (668)
++++|++++|||. ++ +..+..+......+ .+++|++|+|++++.+++++ .+++||+++++.+|+.|
T Consensus 146 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 225 (299)
T 1n2s_A 146 HLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD 225 (299)
T ss_dssp EEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred eEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHH
Confidence 8999999999985 23 33344444332222 38999999999999999865 37899999999999999
Q ss_pred HHHHHHhhcCCCCC------CCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCCC
Q 005949 603 ILEMYKKYINPEFK------WVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 603 ~~~~i~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~~ 667 (668)
+++.+++.+|.+.. +...+.... ...........+|++|+++.+| .+.+|+++|+++++++.++
T Consensus 226 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~l~~~~~~~~~~ 296 (299)
T 1n2s_A 226 YAALVFDEARKAGITLALTELNAVPTSAY-PTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTT 296 (299)
T ss_dssp HHHHHHHHHHHHTCCCCCCEEEEECSTTS-CCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCCccccccccccccccccc-cCcCCCCCceeeeHHHHHHhcCCCCCCHHHHHHHHHHHHHhc
Confidence 99999999987631 111111100 0001112345789999999877 5568999999999998654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=298.27 Aligned_cols=261 Identities=14% Similarity=0.180 Sum_probs=210.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHH--cCCccc-------------------------------ccccccCChhHHHHH-hh
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEK--EGIPFE-------------------------------YGKGRLEDCSSLIAD-VQ 428 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~--~g~~v~-------------------------------~~~~D~~d~~~~~~~-l~ 428 (668)
+|+||||||+||||++|++.|++ .|++|. ++.+|++|++++.++ ..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 57999999999999999999999 888653 345789999998887 33
Q ss_pred hcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 429 SVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 429 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
++|+|||+||.. ..+..++...+++|+.++.+++++|++.++++|++||+.+|+.... | .+|+.+
T Consensus 90 --~~D~vih~A~~~-----~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~-------~~E~~~ 154 (362)
T 3sxp_A 90 --HFDYLFHQAAVS-----DTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-P-------NVVGKN 154 (362)
T ss_dssp --CCSEEEECCCCC-----GGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-S-------BCTTSC
T ss_pred --CCCEEEECCccC-----CccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-C-------CCCCCC
Confidence 569999999955 2356778889999999999999999999999999999999976544 4 455556
Q ss_pred CCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------------HHHHhhcccceeecC-----CCcccH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIP-----NSMTVL 571 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~-----~~~~~v 571 (668)
..|.+.|+.||..+|++++.+... ++++++|++++|||.. ++..+..+......+ .+++|+
T Consensus 155 ~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 232 (362)
T 3sxp_A 155 ESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYI 232 (362)
T ss_dssp CCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEH
T ss_pred CCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEH
Confidence 777899999999999999998765 8999999999999972 333444444433322 279999
Q ss_pred hhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--C
Q 005949 572 DELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--E 649 (668)
Q Consensus 572 ~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~ 649 (668)
+|+|++++.+++++..|+||+++++.+|+.|+++.+++.+| +..+...+.+. ........+|++|+++.+| +
T Consensus 233 ~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~p 306 (362)
T 3sxp_A 233 EDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY-----AFFQKHTQAHIEPTILDLDYTP 306 (362)
T ss_dssp HHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC------------CCCCBCCHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC-----cCcccceecCHHHHHHHhCCCC
Confidence 99999999999988777999999999999999999999999 66554444320 1223456889999988777 3
Q ss_pred ccChHHHHHHHHhccCC
Q 005949 650 LLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 650 ~~~~~~~l~~~~~~~~~ 666 (668)
..+++++|+++++++.+
T Consensus 307 ~~~l~e~l~~~~~~~~~ 323 (362)
T 3sxp_A 307 LYDLESGIKDYLPHIHA 323 (362)
T ss_dssp CCCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 45999999999999864
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=296.88 Aligned_cols=272 Identities=15% Similarity=0.147 Sum_probs=212.9
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHcCCccc------------------------ccccccCChhHHHHHhhhcCCCEEE
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------YGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
.++|+||||||+||||+++++.|+++|++|. ++.+|++|.+++.++++++++|+||
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 3468999999999999999999999998652 3457899999999999988899999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
|+||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....| .+|+.+..|.+.
T Consensus 92 h~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~-------~~E~~~~~p~~~ 161 (335)
T 1rpn_A 92 NLAAQS---FVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER-------QDENTPFYPRSP 161 (335)
T ss_dssp ECCSCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSH
T ss_pred ECcccc---chhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCC-------CCcccCCCCCCh
Confidence 999976 44444667888899999999999999999874 788999999998765444 455566677799
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---h--------HHHHhhcccce-eecC-----CCcccHhhHHHH
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---N--------FITKISRYNKV-VNIP-----NSMTVLDELLPI 577 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~--------~~~~~~~~~~~-~~~~-----~~~~~v~D~a~~ 577 (668)
|+.+|..+|++++.+.+.++++++++|++++|||. + ++..+..+... ...+ .+|+|++|+|++
T Consensus 162 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a 241 (335)
T 1rpn_A 162 YGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA 241 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHH
Confidence 99999999999999876678999999999999985 1 22233344322 1222 279999999999
Q ss_pred HHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCC-CCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc-cChH
Q 005949 578 SIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKW-VNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL-LSIK 654 (668)
Q Consensus 578 ~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~-~~~~ 654 (668)
++.+++++..++||+++++.+|+.|+++.+++.+|.+... ..+... ...+.......+|++|+++.+| .+ .+++
T Consensus 242 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~ 318 (335)
T 1rpn_A 242 MWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA---FFRPAEVDVLLGNPAKAQRVLGWKPRTSLD 318 (335)
T ss_dssp HHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG---GCCSSCCCBCCBCTHHHHHHHCCCCCSCHH
T ss_pred HHHHHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccc---ccCCCcchhhcCCHHHHHHhcCCCcCCCHH
Confidence 9999998777999999999999999999999999986421 111110 0112222345789999998777 33 5899
Q ss_pred HHHHHHHhccC
Q 005949 655 DSLIKYVFEPN 665 (668)
Q Consensus 655 ~~l~~~~~~~~ 665 (668)
++|+++++++.
T Consensus 319 e~l~~~~~~~~ 329 (335)
T 1rpn_A 319 ELIRMMVEADL 329 (335)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998874
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=297.81 Aligned_cols=268 Identities=18% Similarity=0.168 Sum_probs=210.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc------------------ccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
||+|+||||+||||++++++|+++|++|. ++.+|++|.+++.++++..++|+|||+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~-- 78 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS-- 78 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC--
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc--
Confidence 68999999999999999999999998652 3567899999999999855569999999976
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....| .+|+.+..|.+.|+.+|..+|
T Consensus 79 -~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~e 150 (330)
T 2c20_A 79 -LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDL-------ITEETMTNPTNTYGETKLAIE 150 (330)
T ss_dssp -CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSS-------BCTTSCCCCSSHHHHHHHHHH
T ss_pred -CccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCC-------CCcCCCCCCCChHHHHHHHHH
Confidence 33334567788899999999999999999987 788889999997654443 455566677799999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh-------------hHHHHhhc----ccc-eeec-----------CCCcccHhhH
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR-------------NFITKISR----YNK-VVNI-----------PNSMTVLDEL 574 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~-------------~~~~~~~~----~~~-~~~~-----------~~~~~~v~D~ 574 (668)
++++.+.+..+++++++|++++|||. .++..+.+ ... .... ..+|+|++|+
T Consensus 151 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv 230 (330)
T 2c20_A 151 KMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230 (330)
T ss_dssp HHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHH
T ss_pred HHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHH
Confidence 99999866568999999999999884 23333322 222 2111 1279999999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-C
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-E 649 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~ 649 (668)
|++++.++++. .+++||+++++.+|+.|+++.+++.+|.+.++...+. .........+|++|+++.+| .
T Consensus 231 a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~k~~~~lG~~ 304 (330)
T 2c20_A 231 VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR------RAGDPARLVASSQKAKEKLGWD 304 (330)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECC------CSSCCSEECBCCHHHHHHHCCC
T ss_pred HHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC------CCCcccccccCHHHHHHHhCCC
Confidence 99999999764 3589999999999999999999999998765432221 11222345789999998777 3
Q ss_pred c-c-ChHHHHHHHHhccCC
Q 005949 650 L-L-SIKDSLIKYVFEPNK 666 (668)
Q Consensus 650 ~-~-~~~~~l~~~~~~~~~ 666 (668)
+ . +++++|+++++|+.+
T Consensus 305 p~~~~l~~~l~~~~~~~~~ 323 (330)
T 2c20_A 305 PRYVNVKTIIEHAWNWHQK 323 (330)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHH
Confidence 3 3 899999999998743
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=297.88 Aligned_cols=261 Identities=16% Similarity=0.177 Sum_probs=208.7
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~ 449 (668)
.+|+||||||+||||++|++.|+++|++|. ++.+|++|.+++.++++++ |+|||+|+.. ...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih~A~~~---~~~- 91 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGV--SAVLHLGAFM---SWA- 91 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTC--SEEEECCCCC---CSS-
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCC--CEEEECCccc---Ccc-
Confidence 457899999999999999999999999763 4568999999999999855 9999999976 222
Q ss_pred cccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeec--CCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHH
Q 005949 450 CESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYD--AAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELL 526 (668)
Q Consensus 450 ~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~--~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~ 526 (668)
.......+++|+.++.+|+++|++.++ ++|++||+.||+.. ...| ..|+.+..|.+.|+.+|.++|+++
T Consensus 92 -~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~E~~~ 163 (347)
T 4id9_A 92 -PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLP-------VTEDHPLCPNSPYGLTKLLGEELV 163 (347)
T ss_dssp -GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSS-------BCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCC-------cCCCCCCCCCChHHHHHHHHHHHH
Confidence 223377889999999999999999998 78899999999873 3333 555666777899999999999999
Q ss_pred HhccCeeEeEEeeeecCCCC-------------Chh---------------h----HHHHhhcccceee-----cCCCc-
Q 005949 527 KEYDNVCTLRVRMPISSDLN-------------NPR---------------N----FITKISRYNKVVN-----IPNSM- 568 (668)
Q Consensus 527 ~~~~~~~~l~~~~~r~~~~~-------------g~~---------------~----~~~~~~~~~~~~~-----~~~~~- 568 (668)
+.+.+..+++++++|++++| ||. . ++..+..+..... ...+|
T Consensus 164 ~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 243 (347)
T 4id9_A 164 RFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFR 243 (347)
T ss_dssp HHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCE
T ss_pred HHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCc
Confidence 99877779999999999999 886 2 2333344433222 12377
Q ss_pred ---ccHhhHHHHHHHHHhcc--CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHH
Q 005949 569 ---TVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKL 643 (668)
Q Consensus 569 ---~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~ 643 (668)
+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+++.+|.+.++...+. ......+|++|+
T Consensus 244 ~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~---------~~~~~~~d~~k~ 314 (347)
T 4id9_A 244 MHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPG---------DGVYYHTSNERI 314 (347)
T ss_dssp ECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSS---------CCCBCCBCCHHH
T ss_pred cCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCC---------cccccccCHHHH
Confidence 99999999999999876 4789999999999999999999999998766433321 112567899999
Q ss_pred HhhcC-C-ccChHHHHHHHHhccC
Q 005949 644 KKEFP-E-LLSIKDSLIKYVFEPN 665 (668)
Q Consensus 644 ~~~~g-~-~~~~~~~l~~~~~~~~ 665 (668)
++.+| . ..+++++|+++++++.
T Consensus 315 ~~~lG~~p~~~~~~~l~~~~~~~~ 338 (347)
T 4id9_A 315 RNTLGFEAEWTMDRMLEEAATARR 338 (347)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHH
Confidence 99777 3 3599999999998874
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=292.71 Aligned_cols=266 Identities=16% Similarity=0.176 Sum_probs=210.6
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcccccccccC----C------------hhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE----D------------CSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~----d------------~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
+||+|||||||||||++|++.|+++|++|..+..+-. . .+.+..-+. ++|+|||+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~~d~vi~~a~~~--- 80 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--DVRLVYHLASHK--- 80 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--TEEEEEECCCCC---
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--cCCEEEECCccC---
Confidence 4679999999999999999999999998866544322 0 111111222 569999999977
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
....+..++...++ |+.++.+++++|++.++ ++|++||..+|+.....| .+|+.+..|.+.|+.+|..+|+
T Consensus 81 ~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~ 152 (321)
T 3vps_A 81 SVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLP-------TPEDSPLSPRSPYAASKVGLEM 152 (321)
T ss_dssp CHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred ChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCC-------CCCCCCCCCCChhHHHHHHHHH
Confidence 55556778888888 99999999999999997 788889999998765554 5556666778999999999999
Q ss_pred HHHhccCeeEe-EEeeeecCCCCChh--------hHHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhccCCcee
Q 005949 525 LLKEYDNVCTL-RVRMPISSDLNNPR--------NFITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRNLRGIW 590 (668)
Q Consensus 525 ~~~~~~~~~~l-~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~~g~~ 590 (668)
+++.+.+..++ +++++|++++|||. .++..+..+......+ .+++|++|+|++++.+++++..|+|
T Consensus 153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g~~ 232 (321)
T 3vps_A 153 VAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSVV 232 (321)
T ss_dssp HHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCSEE
T ss_pred HHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCCeE
Confidence 99998776789 99999999999996 3444455555444333 2899999999999999998755699
Q ss_pred eecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-C--ccChHHHHHHHHhccCCC
Q 005949 591 NFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-E--LLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 591 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~--~~~~~~~l~~~~~~~~~~ 667 (668)
|+++++.+|+.|+++.++ .+|.+..+...+.. ........+|++|+++.+| . ..+++++|.++++++.++
T Consensus 233 ~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 305 (321)
T 3vps_A 233 NFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR------PNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSR 305 (321)
T ss_dssp EESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC------TTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTS
T ss_pred EecCCCcccHHHHHHHHH-HhCCCCccccCCCC------CCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999 99988765433321 2233456889999999777 4 489999999999998654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=294.57 Aligned_cols=269 Identities=15% Similarity=0.146 Sum_probs=210.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccccc----ccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccce
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYG----KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTI 458 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~----~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 458 (668)
+|+|+||||+||||++|++.|+++|++|..+ .+|++|.+++.++++..++|+|||+|+... ....+..++...+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~~~~~ 80 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG--GIVANNTYPADFI 80 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC--CHHHHHHCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecC--CcchhhhCHHHHH
Confidence 3799999999999999999999999987554 479999999999999666799999999661 1223456778889
Q ss_pred ehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC---CCCC-CCcchhhHHHHHHHHHhccCee
Q 005949 459 RTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT---PNFT-GSFYSKTKAMVEELLKEYDNVC 533 (668)
Q Consensus 459 ~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~---~~~~-~~~Y~~sK~~~E~~~~~~~~~~ 533 (668)
++|+.++.+|+++|++.++ ++|++||..+|+.....| +.|++. +..| .+.|+.+|..+|++++.+.+..
T Consensus 81 ~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~------~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 154 (321)
T 1e6u_A 81 YQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP------MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY 154 (321)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSS------BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCC------cCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998 788999999998654444 344431 3344 3589999999999999987667
Q ss_pred EeEEeeeecCCCCChhh------------HHHHhhcc-----cceeecC-----CCcccHhhHHHHHHHHHhccC-----
Q 005949 534 TLRVRMPISSDLNNPRN------------FITKISRY-----NKVVNIP-----NSMTVLDELLPISIEMAKRNL----- 586 (668)
Q Consensus 534 ~l~~~~~r~~~~~g~~~------------~~~~~~~~-----~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~----- 586 (668)
+++++++|++++|||.. ++..+..+ .+....+ .+|+|++|+|++++.+++++.
T Consensus 155 ~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~ 234 (321)
T 1e6u_A 155 GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLE 234 (321)
T ss_dssp CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccccccc
Confidence 89999999999999852 33333322 2222222 289999999999999998752
Q ss_pred -----CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc-cChHHHHHH
Q 005949 587 -----RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL-LSIKDSLIK 659 (668)
Q Consensus 587 -----~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~-~~~~~~l~~ 659 (668)
+++||+++++.+|+.|+++.+.+.+|.+..+...+.. +.......+|++|+++ +| .+ .+|+++|++
T Consensus 235 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~d~~k~~~-lG~~p~~~~~~~l~~ 307 (321)
T 1e6u_A 235 NTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK------PDGTPRKLLDVTRLHQ-LGWYHEISLEAGLAS 307 (321)
T ss_dssp TSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS------CCCCSBCCBCCHHHHH-TTCCCCCCHHHHHHH
T ss_pred ccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC------CCCcccccCCHHHHHh-cCCccCCcHHHHHHH
Confidence 4899999999999999999999999987654333211 1223456889999999 77 33 599999999
Q ss_pred HHhccCC
Q 005949 660 YVFEPNK 666 (668)
Q Consensus 660 ~~~~~~~ 666 (668)
+++++.+
T Consensus 308 ~~~~~~~ 314 (321)
T 1e6u_A 308 TYQWFLE 314 (321)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998743
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-34 Score=287.97 Aligned_cols=269 Identities=15% Similarity=0.152 Sum_probs=187.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccccc----------ccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYG----------KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCE 451 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~----------~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~ 451 (668)
|+|+|+||||+||||++++++|+++|++|..+ .+|++|++++.+++++.++|+|||+||.. ....+.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~---~~~~~~ 77 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAER---RPDVVE 77 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC------------
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCccc---Chhhhh
Confidence 34799999999999999999999999987543 38999999999999886789999999976 344456
Q ss_pred cccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC
Q 005949 452 SHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN 531 (668)
Q Consensus 452 ~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~ 531 (668)
.++...+++|+.++.+|+++|.+.++++|++||..+|++ ...| .+|+.+..|.+.|+.+|..+|++++.+.
T Consensus 78 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~-------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~- 148 (315)
T 2ydy_A 78 NQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPP-------YREEDIPAPLNLYGKTKLDGEKAVLENN- 148 (315)
T ss_dssp ----------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCS-------BCTTSCCCCCSHHHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCC-------CCCCCCCCCcCHHHHHHHHHHHHHHHhC-
Confidence 778889999999999999999999899999999999977 3333 4555666677999999999999998863
Q ss_pred eeEeEEeeeecCCCCChhh---------HHHHhh-cccceee---cCCCcccHhhHHHHHHHHHhc-----cCCceeeec
Q 005949 532 VCTLRVRMPISSDLNNPRN---------FITKIS-RYNKVVN---IPNSMTVLDELLPISIEMAKR-----NLRGIWNFT 593 (668)
Q Consensus 532 ~~~l~~~~~r~~~~~g~~~---------~~~~~~-~~~~~~~---~~~~~~~v~D~a~~~~~~~~~-----~~~g~~ni~ 593 (668)
++++++|++++|||.. ++..+. .+..... ...+++|++|+|++++.++++ ..+++||++
T Consensus 149 ---~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~ 225 (315)
T 2ydy_A 149 ---LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWS 225 (315)
T ss_dssp ---TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECC
T ss_pred ---CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEc
Confidence 4568899999998741 333343 3333222 233899999999999999875 357899999
Q ss_pred CCCccCHHHHHHHHHhhcCCCCC-CCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCCC
Q 005949 594 NPGVVSHNEILEMYKKYINPEFK-WVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 594 ~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~~ 667 (668)
+++.+|+.|+++.+++.+|.+.. +.+++. .............+|++|++++++ +..+|+++|.++++++.++
T Consensus 226 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 226 GNEQMTKYEMACAIADAFNLPSSHLRPITD--SPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp CSCCBCHHHHHHHHHHHTTCCCTTEEEECS--CCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred CCCcccHHHHHHHHHHHhCCChhheecccc--ccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence 99999999999999999998754 222221 000001112346789999999933 5678999999999998654
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=285.38 Aligned_cols=251 Identities=12% Similarity=0.091 Sum_probs=202.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc--------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCCcc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVD 448 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~ 448 (668)
|||||||| +||||++|++.|+++|++| .++.+|++|.+++.+++++ ++|+|||+|+..
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~------ 74 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAAS------ 74 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHH------
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCC------
Confidence 47999999 5999999999999999975 3457899999998888886 579999999965
Q ss_pred ccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHH
Q 005949 449 WCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLK 527 (668)
Q Consensus 449 ~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~ 527 (668)
..++...+++|+.++.+|+++|++.++ ++|++||+.+|+.....| .+|+.+..|.+.|+.+|.++|++ +
T Consensus 75 --~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK~~~E~~-~ 144 (286)
T 3gpi_A 75 --EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEW-------LDEDTPPIAKDFSGKRMLEAEAL-L 144 (286)
T ss_dssp --HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSE-------ECTTSCCCCCSHHHHHHHHHHHH-G
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCC-------CCCCCCCCCCChhhHHHHHHHHH-H
Confidence 356788899999999999999999887 788999999998765444 56666777889999999999999 7
Q ss_pred hccCeeEeEEeeeecCCCCChh--hHHHHhhccccee---ecCCCcccHhhHHHHHHHHHhc----cCCceeeecCCCcc
Q 005949 528 EYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVV---NIPNSMTVLDELLPISIEMAKR----NLRGIWNFTNPGVV 598 (668)
Q Consensus 528 ~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~---~~~~~~~~v~D~a~~~~~~~~~----~~~g~~ni~~~~~~ 598 (668)
.+ ++++++|++++|||. .|+..+.. .... ....+++|++|+|++++.++++ ..+++||+++++.+
T Consensus 145 ~~-----~~~~ilR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (286)
T 3gpi_A 145 AA-----YSSTILRFSGIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPL 218 (286)
T ss_dssp GG-----SSEEEEEECEEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCE
T ss_pred hc-----CCeEEEecccccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCC
Confidence 64 899999999999997 47777766 3222 1223899999999999999987 36789999999999
Q ss_pred CHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-C-c-cChHHHHHHHHhccCCC
Q 005949 599 SHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-E-L-LSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 599 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~-~-~~~~~~l~~~~~~~~~~ 667 (668)
|+.|+++.+++.+|.+.++...+ .......+|++|++ .+| . . ++|+++|+++++++..+
T Consensus 219 s~~e~~~~i~~~~g~~~~~~~~~---------~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~ 280 (286)
T 3gpi_A 219 PVHDLLRWLADRQGIAYPAGATP---------PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREG 280 (286)
T ss_dssp EHHHHHHHHHHHTTCCCCCSCCC---------CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHcCCCCCCCCCc---------ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhcc
Confidence 99999999999999886643322 22345689999998 555 3 3 37999999999998643
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=297.74 Aligned_cols=267 Identities=16% Similarity=0.129 Sum_probs=204.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcC-Ccc--------------------cccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEG-IPF--------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g-~~v--------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
.||+|+||||+||||++|++.|+++| ++| .++.+|++|++++.+++++ +|+|||+|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~--~d~Vih~A~ 108 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDE--YDYVFHLAT 108 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSC--CSEEEECCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhC--CCEEEECCC
Confidence 35799999999999999999999999 754 2345789999988888885 599999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeecCCCCCCCCCCCC-CCCC---CC-CCCC
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYDAAHPEGSGIGYK-EEDT---PN-FTGS 513 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~-ee~~---~~-~~~~ 513 (668)
.. ....+..++...+++|+.++.+|+++|++. ++ ++|++||..+|+.....| +. .|+. +. .|.+
T Consensus 109 ~~---~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~------~~~~E~~~~~~~~~~~~ 179 (377)
T 2q1s_A 109 YH---GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDD------AKATEETDIVSLHNNDS 179 (377)
T ss_dssp CS---CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------------CCCCCCCSSCCCS
T ss_pred cc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCC------cCcccccccccccCCCC
Confidence 76 344445678889999999999999999998 87 788999999998754433 33 0443 54 6778
Q ss_pred cchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---------------------HHHHhhcccceeec-----CCC
Q 005949 514 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------------------FITKISRYNKVVNI-----PNS 567 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------------------~~~~~~~~~~~~~~-----~~~ 567 (668)
.|+.+|..+|++++.+.+..+++++++|++++|||.. ++..+..+...... ..+
T Consensus 180 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~ 259 (377)
T 2q1s_A 180 PYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEEC
T ss_pred chHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEe
Confidence 9999999999999998766789999999999999853 23334444433222 238
Q ss_pred cccHhhHHHH-HHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCC-CCccChhHHHh
Q 005949 568 MTVLDELLPI-SIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRS-NNEMDASKLKK 645 (668)
Q Consensus 568 ~~~v~D~a~~-~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ld~~k~~~ 645 (668)
++|++|+|++ ++.+++++..|+||+++++.+|+.|+++.+++.+|.+.++...+.. ..... ...+|++|+++
T Consensus 260 ~i~v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~------~~~~~~~~~~d~~k~~~ 333 (377)
T 2q1s_A 260 FIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKR------PWDNSGKRFGSPEKARR 333 (377)
T ss_dssp CEEHHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC------GGGCC-CCCCCCHHHHH
T ss_pred eEEHHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC------ccccccccccCHHHHHH
Confidence 9999999999 9999987655699999999999999999999999987665444321 11223 56789999988
Q ss_pred hcC--CccChHHHHHHHHhccC
Q 005949 646 EFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 646 ~~g--~~~~~~~~l~~~~~~~~ 665 (668)
.+| +..+++++|++++++++
T Consensus 334 ~lG~~p~~~l~e~l~~~~~~~~ 355 (377)
T 2q1s_A 334 ELGFSADVSIDDGLRKTIEWTK 355 (377)
T ss_dssp HHCCCCCCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHH
Confidence 777 33589999999998874
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=291.91 Aligned_cols=272 Identities=17% Similarity=0.153 Sum_probs=210.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHc--CCccc-----------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKE--GIPFE-----------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~--g~~v~-----------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
||+||||||+||||++++++|+++ |++|. ++.+|++|++++.++++++ |+|||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih 81 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA--DAIVH 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC--SEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcC--CEEEE
Confidence 689999999999999999999999 77552 3456899999999999987 99999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCC-C-----CCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAH-P-----EGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~-p-----~~~~~~~~ee~~~~~~ 511 (668)
+||.. ....+..++...+++|+.++.+++++|.+.++++|++||..+|+..... | ..... ..+|+.+..|
T Consensus 82 ~A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~-~~~E~~~~~~ 157 (348)
T 1oc2_A 82 YAAES---HNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGE-KFTAETNYNP 157 (348)
T ss_dssp CCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS-SBCTTSCCCC
T ss_pred CCccc---CccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCC-CcCCCCCCCC
Confidence 99976 4444556788899999999999999999998899999999999764320 0 00001 2455556667
Q ss_pred CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecC-----CCcccHhhHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTVLDELLPIS 578 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~ 578 (668)
.+.|+.+|..+|++++.+....+++++++|++++|||.. ++..+..+......+ .+++|++|+|+++
T Consensus 158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 237 (348)
T 1oc2_A 158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 237 (348)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHH
Confidence 799999999999999998766799999999999999862 334444444332222 2799999999999
Q ss_pred HHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccC-hH
Q 005949 579 IEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLS-IK 654 (668)
Q Consensus 579 ~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~-~~ 654 (668)
+.+++++ .+++||+++++.+|+.|+++.+.+.+|.+.+...... ..+.......+|++|+++.+| +..+ ++
T Consensus 238 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 312 (348)
T 1oc2_A 238 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT-----DRAGHDLRYAIDASKLRDELGWTPQFTDFS 312 (348)
T ss_dssp HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEEC-----CCTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred HHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCC-----CCCCcccccccCHHHHHHHcCCCCCCCcHH
Confidence 9999866 5669999999999999999999999998753211100 011111234689999998777 3345 99
Q ss_pred HHHHHHHhccC
Q 005949 655 DSLIKYVFEPN 665 (668)
Q Consensus 655 ~~l~~~~~~~~ 665 (668)
++|+++++++.
T Consensus 313 ~~l~~~~~~~~ 323 (348)
T 1oc2_A 313 EGLEETIQWYT 323 (348)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998874
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=293.81 Aligned_cols=267 Identities=15% Similarity=0.146 Sum_probs=207.6
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcccc-------------------------------cccccCChhHHHHHhhhc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------------------------------GKGRLEDCSSLIADVQSV 430 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------------------------------~~~D~~d~~~~~~~l~~~ 430 (668)
|+|+|+||||+||||++++++|+++|++|.. +.+|++|++++.++++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 4579999999999999999999999987632 346888999999999865
Q ss_pred CCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 431 KPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 431 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
++|+|||+||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....| .+|+.+.
T Consensus 81 ~~d~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~-------~~E~~~~ 150 (348)
T 1ek6_A 81 SFMAVIHFAGLK---AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLP-------LDEAHPT 150 (348)
T ss_dssp CEEEEEECCSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSS-------BCTTSCC
T ss_pred CCCEEEECCCCc---CccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCC-------cCCCCCC
Confidence 679999999976 33334567788899999999999999999987 788999999997654443 4455555
Q ss_pred CC-CCcchhhHHHHHHHHHhccCeeE--eEEeeeecCCCCChh--------------hHHHHhh-----cccceeec---
Q 005949 510 FT-GSFYSKTKAMVEELLKEYDNVCT--LRVRMPISSDLNNPR--------------NFITKIS-----RYNKVVNI--- 564 (668)
Q Consensus 510 ~~-~~~Y~~sK~~~E~~~~~~~~~~~--l~~~~~r~~~~~g~~--------------~~~~~~~-----~~~~~~~~--- 564 (668)
.| .+.|+.+|..+|++++.+.+. + ++++++|++++|||. .++..+. .+......
T Consensus 151 ~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 229 (348)
T 1ek6_A 151 GGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND 229 (348)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred CCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCc
Confidence 55 789999999999999998654 5 999999999999872 2443322 22222221
Q ss_pred --------CCCcccHhhHHHHHHHHHhcc---CC-ceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccC
Q 005949 565 --------PNSMTVLDELLPISIEMAKRN---LR-GIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAP 632 (668)
Q Consensus 565 --------~~~~~~v~D~a~~~~~~~~~~---~~-g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 632 (668)
..+|+|++|+|++++.++++. .+ ++||+++++.+|+.|+++.+++.+|.+.++...+. ....
T Consensus 230 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~ 303 (348)
T 1ek6_A 230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR------REGD 303 (348)
T ss_dssp SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC------CTTC
T ss_pred ccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC------CCcc
Confidence 127999999999999999764 33 69999999999999999999999998765432221 1112
Q ss_pred CCCCccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 633 RSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 633 ~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
.....+|++|+++.+| +..+++++|+++++|+.
T Consensus 304 ~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~ 338 (348)
T 1ek6_A 304 VAACYANPSLAQEELGWTAALGLDRMCEDLWRWQK 338 (348)
T ss_dssp CSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred chhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 2345789999998877 33589999999999874
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-34 Score=294.78 Aligned_cols=274 Identities=19% Similarity=0.185 Sum_probs=212.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------ccccccCChhHHHHHhhhcC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------YGKGRLEDCSSLIADVQSVK 431 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------~~~~D~~d~~~~~~~l~~~~ 431 (668)
|||+||||||+||||+++++.|+++|++|. ++.+|++|++++.+++++++
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 102 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK 102 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence 447899999999999999999999998652 23468899999999999888
Q ss_pred CCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC----cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI----LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~----~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|+|||+||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....| .+|+.
T Consensus 103 ~d~vih~A~~~---~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~-------~~E~~ 172 (375)
T 1t2a_A 103 PTEIYNLGAQS---HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP-------QKETT 172 (375)
T ss_dssp CSEEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS-------BCTTS
T ss_pred CCEEEECCCcc---cccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCC-------CCccC
Confidence 99999999976 34444567788899999999999999999885 788999999998655444 45555
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---h--------HHHHhhcccce-eecC-----CCccc
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---N--------FITKISRYNKV-VNIP-----NSMTV 570 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~--------~~~~~~~~~~~-~~~~-----~~~~~ 570 (668)
+..|.+.|+.+|..+|++++.+...++++++++|++++|||. . ++..+..+... ...+ .+|+|
T Consensus 173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 252 (375)
T 1t2a_A 173 PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH 252 (375)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence 666779999999999999999877678999999999999984 2 22233334322 2222 28999
Q ss_pred HhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCC--CCHH-------------HhhhhhccCCCC
Q 005949 571 LDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVN--FTLE-------------EQAKVIVAPRSN 635 (668)
Q Consensus 571 v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~--~~~~-------------~~~~~~~~~~~~ 635 (668)
++|+|++++.+++++..++||+++++.+|+.|+++.+++.+|.+.++.. +|.. ......+.....
T Consensus 253 v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (375)
T 1t2a_A 253 AKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDF 332 (375)
T ss_dssp HHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCB
T ss_pred HHHHHHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchh
Confidence 9999999999998877799999999999999999999999998754221 1100 000001112234
Q ss_pred CccChhHHHhhcC-C-ccChHHHHHHHHhccC
Q 005949 636 NEMDASKLKKEFP-E-LLSIKDSLIKYVFEPN 665 (668)
Q Consensus 636 ~~ld~~k~~~~~g-~-~~~~~~~l~~~~~~~~ 665 (668)
..+|++|+++.+| . ..+++++|+++++++.
T Consensus 333 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~ 364 (375)
T 1t2a_A 333 LQGDCTKAKQKLNWKPRVAFDELVREMVHADV 364 (375)
T ss_dssp CCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHhcCCCccCCHHHHHHHHHHHHH
Confidence 5679999998777 3 3589999999998874
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=272.06 Aligned_cols=268 Identities=18% Similarity=0.118 Sum_probs=214.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|+ + +++|++++|.... . .+ +.+|+.|.+.+.+++...++|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~------~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEI------Q-----GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCC------T-----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcC------C-----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 479999999999999999999 5 4789888886421 0 12 7899999999999885446999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||......+..++...+++|+.++.++++++++.+ + +||++||..+|+.... ..+|+.+..|.+.|+.+|..+
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~----~~~e~~~~~~~~~Y~~sK~~~ 137 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKG----NYKEEDIPNPINYYGLSKLLG 137 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSC----SBCTTSCCCCSSHHHHHHHHH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCC----CcCCCCCCCCCCHHHHHHHHH
Confidence 999866544456788899999999999999999876 4 9999999999987643 236777778889999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCc
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 246 (668)
|.+++. ++++++||+.|||+ ..+...+......+..+.+.++ .++++|++|+|++++.+++++. ++
T Consensus 138 e~~~~~------~~~~~iR~~~v~G~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-~g 203 (273)
T 2ggs_A 138 ETFALQ------DDSLIIRTSGIFRN----KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-TG 203 (273)
T ss_dssp HHHHCC------TTCEEEEECCCBSS----SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-CE
T ss_pred HHHHhC------CCeEEEeccccccc----cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-CC
Confidence 999865 67899999999983 3566667677777777766543 7899999999999999998765 56
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec--cCCCCCCcccccChHHHHh-CCCcc-cCCHHHHH
Q 005949 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV--ENRPFNDQRYFLDDQKLTS-LGWSE-RTIWEEGL 312 (668)
Q Consensus 247 ~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~k~~~-lG~~~-~~~~~~~l 312 (668)
+||+++ +.+|+.|+++.+.+.+|.+........ ...+.......+|++|+++ |||+| .+++++++
T Consensus 204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 204 IIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp EEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred eEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 999998 999999999999999998754321111 1112223457899999985 99999 58887754
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=301.46 Aligned_cols=283 Identities=15% Similarity=0.141 Sum_probs=209.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+|||||||||||++|++.|+++ +++|++++|.... ...+.+|+.+. +.+++ .++|+||
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~--------------~~~v~~d~~~~--~~~~l--~~~D~Vi 206 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPK--------------PGKRFWDPLNP--ASDLL--DGADVLV 206 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCC--------------TTCEECCTTSC--CTTTT--TTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCC--------------ccceeecccch--hHHhc--CCCCEEE
Confidence 689999999999999999999999 6899999986431 11257777653 34445 6899999
Q ss_pred EcCccCCcc-cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCC-CCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 86 HFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 86 h~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~-~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|+|+..... ....++..++++|+.++.+|++++.+...+++||++||+++||. ....+ .+|+.+. +.+.|+.+|
T Consensus 207 h~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~---~~E~~~~-~~~~y~~~~ 282 (516)
T 3oh8_A 207 HLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI---LTEESES-GDDFLAEVC 282 (516)
T ss_dssp ECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE---ECTTSCC-CSSHHHHHH
T ss_pred ECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc---cCCCCCC-CcChHHHHH
Confidence 999976432 23445678899999999999999444345899999999999993 32222 2555555 778899999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
...|.++... .+.+++++++||++||||+. .+++.+...+..+... ..+++.+.++|+|++|+|++++.+++++.
T Consensus 283 ~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~---~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 357 (516)
T 3oh8_A 283 RDWEHATAPA-SDAGKRVAFIRTGVALSGRG---GMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTDIYYRAIVDAQ 357 (516)
T ss_dssp HHHHHTTHHH-HHTTCEEEEEEECEEEBTTB---SHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHH-HhCCCCEEEEEeeEEECCCC---ChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHHHHHHHHhCcc
Confidence 9999887644 45699999999999999985 5677776655555443 45888999999999999999999999887
Q ss_pred CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC---------CCCCcccccChHHHHhCCCcccCC-HHHHHH
Q 005949 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR---------PFNDQRYFLDDQKLTSLGWSERTI-WEEGLR 313 (668)
Q Consensus 244 ~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~k~~~lG~~~~~~-~~~~l~ 313 (668)
.+++||+++++.+|+.|+++.+++.+|.+....+...... ........++++|+++|||+|+++ ++++|+
T Consensus 358 ~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~ 437 (516)
T 3oh8_A 358 ISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIA 437 (516)
T ss_dssp CCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHH
T ss_pred cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHH
Confidence 7789999999999999999999999997653222111100 001123457889999999999976 999999
Q ss_pred HHHH
Q 005949 314 KTIE 317 (668)
Q Consensus 314 ~~~~ 317 (668)
++++
T Consensus 438 ~~l~ 441 (516)
T 3oh8_A 438 HELG 441 (516)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9886
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=290.76 Aligned_cols=267 Identities=15% Similarity=0.113 Sum_probs=211.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhcCCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~~~d 433 (668)
||+||||||+||||+++++.|+++|++|. ++.+|++|.+++.+++++ +|
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 104 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG--VD 104 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT--CS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC--CC
Confidence 57999999999999999999999998652 345688899999988885 49
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
+|||+||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....| .+|+.+..|.
T Consensus 105 ~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~-------~~E~~~~~~~ 174 (352)
T 1sb8_A 105 YVLHQAALG---SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP-------KVEDTIGKPL 174 (352)
T ss_dssp EEEECCSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS-------BCTTCCCCCC
T ss_pred EEEECCccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCC-------CCCCCCCCCC
Confidence 999999976 33344567788899999999999999999987 688999999997654444 4555666777
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------------HHHHhhcccceeecC-----CCcccHhhHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIP-----NSMTVLDELL 575 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~-----~~~~~v~D~a 575 (668)
+.|+.+|..+|++++.+.+..+++++++|++++|||.. ++..+..+......+ .+++|++|+|
T Consensus 175 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 254 (352)
T 1sb8_A 175 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 254 (352)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence 99999999999999988766789999999999999862 344455554433222 2899999999
Q ss_pred HHHHHHHhc--c-CCceeeecCCCccCHHHHHHHHHhhc---CCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-
Q 005949 576 PISIEMAKR--N-LRGIWNFTNPGVVSHNEILEMYKKYI---NPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP- 648 (668)
Q Consensus 576 ~~~~~~~~~--~-~~g~~ni~~~~~~s~~e~~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g- 648 (668)
++++.++.+ . .+++||+++++.+|+.|+++.+++.+ |.+....... ............+|++|+++.+|
T Consensus 255 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~d~~k~~~~lG~ 330 (352)
T 1sb8_A 255 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY----RDFREGDVRHSLADISKAAKLLGY 330 (352)
T ss_dssp HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEE----ECCCTTCCSBCCBCCHHHHHHTCC
T ss_pred HHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCcee----cCCCccchhhccCCHHHHHHHhCC
Confidence 999999876 2 57899999999999999999999999 8876532110 00111222355789999999877
Q ss_pred Cc-cChHHHHHHHHhccC
Q 005949 649 EL-LSIKDSLIKYVFEPN 665 (668)
Q Consensus 649 ~~-~~~~~~l~~~~~~~~ 665 (668)
.+ .+++++|+++++++.
T Consensus 331 ~p~~~~~e~l~~~~~~~~ 348 (352)
T 1sb8_A 331 APKYDVSAGVALAMPWYI 348 (352)
T ss_dssp CCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 33 589999999999874
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=289.56 Aligned_cols=265 Identities=17% Similarity=0.168 Sum_probs=208.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC--Cccc------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG--IPFE------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g--~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
||||||||+||||++++++|+++| ++|. ++.+|++|.+++.+++.+ +|+|||
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vih 81 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRK--VDGVVH 81 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHT--CSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhC--CCEEEE
Confidence 799999999999999999999997 5442 345789999999888864 599999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
+||.. ....+..++..++++|+.++.+|+++|.+.+. ++|++||..+|+.....| .+|+.+..+.+.|
T Consensus 82 ~A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~-------~~E~~~~~~~~~Y 151 (336)
T 2hun_A 82 LAAES---HVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGS-------FTENDRLMPSSPY 151 (336)
T ss_dssp CCCCC---CHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSC-------BCTTBCCCCCSHH
T ss_pred CCCCc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCC-------cCCCCCCCCCCcc
Confidence 99976 34445567888999999999999999999874 889999999998654433 4555566677999
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeec-----CCCcccHhhHHHHHHHHH
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNI-----PNSMTVLDELLPISIEMA 582 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~ 582 (668)
+.||..+|++++.+.+.++++++++|++++|||.. ++..+..+...... ..+++|++|+|++++.++
T Consensus 152 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~ 231 (336)
T 2hun_A 152 SATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVL 231 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHH
Confidence 99999999999998766789999999999999862 33344444443322 237999999999999999
Q ss_pred hcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHH
Q 005949 583 KRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIK 659 (668)
Q Consensus 583 ~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~ 659 (668)
++. .+++||+++++.+|+.|+++.+++.+|.+.+..... ...........+|++|+++.+| +..+++++|++
T Consensus 232 ~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~ 306 (336)
T 2hun_A 232 LKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELV-----EDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKK 306 (336)
T ss_dssp HHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEE-----CCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHH
T ss_pred hCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCccccccc-----CCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHH
Confidence 866 567999999999999999999999999864321110 0011112234689999999777 34689999999
Q ss_pred HHhccC
Q 005949 660 YVFEPN 665 (668)
Q Consensus 660 ~~~~~~ 665 (668)
+++++.
T Consensus 307 ~~~~~~ 312 (336)
T 2hun_A 307 TIDWYL 312 (336)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998874
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=293.08 Aligned_cols=274 Identities=16% Similarity=0.208 Sum_probs=211.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc------------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
||+||||||+||||+++++.|+++|++|. ++.+|++|++++.+++++.++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 68999999999999999999999998653 244689999999999998567999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCC---------CCCCCCCCC
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGS---------GIGYKEEDT 507 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~---------~~~~~ee~~ 507 (668)
||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....|..+ .....+|+.
T Consensus 81 A~~~---~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~ 157 (347)
T 1orr_A 81 AGQV---AMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST 157 (347)
T ss_dssp CCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred Cccc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC
Confidence 9976 34444567788899999999999999999886 588999999997644322000 000134455
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-----------HHHHhhccc-----ceeecC-----C
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----------FITKISRYN-----KVVNIP-----N 566 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----------~~~~~~~~~-----~~~~~~-----~ 566 (668)
+..|.+.|+.+|..+|++++.+....+++++++|++++|||.. ++..++.+. +....+ .
T Consensus 158 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 237 (347)
T 1orr_A 158 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR 237 (347)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceE
Confidence 5567789999999999999998766789999999999999852 334444443 232222 2
Q ss_pred CcccHhhHHHHHHHHHhc-c--CCceeeecCCC--ccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 567 SMTVLDELLPISIEMAKR-N--LRGIWNFTNPG--VVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~-~--~~g~~ni~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
+|+|++|+|++++.++++ . .+++||++++. ++|+.|+++.+++.+|.+.++...+. .........+|++
T Consensus 238 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~ 311 (347)
T 1orr_A 238 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV------RESDQRVFVADIK 311 (347)
T ss_dssp ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC------CSSCCSEECBCCH
T ss_pred eeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC------CCCCcceeecCHH
Confidence 699999999999999985 2 45699999986 49999999999999998765443331 1222334578999
Q ss_pred HHHhhcC-Cc-cChHHHHHHHHhccC
Q 005949 642 KLKKEFP-EL-LSIKDSLIKYVFEPN 665 (668)
Q Consensus 642 k~~~~~g-~~-~~~~~~l~~~~~~~~ 665 (668)
|+++.+| .+ .+|+++|+++++++.
T Consensus 312 k~~~~lG~~p~~~~~e~l~~~~~~~~ 337 (347)
T 1orr_A 312 KITNAIDWSPKVSAKDGVQKMYDWTS 337 (347)
T ss_dssp HHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCccCCHHHHHHHHHHHHH
Confidence 9998877 33 689999999998874
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=289.94 Aligned_cols=269 Identities=20% Similarity=0.227 Sum_probs=209.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
+|+||||||+||||++|+++|+++|++|. ++.+|++|++++.++++++++|+|||+|
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 88 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 88 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence 37999999999999999999999998652 3557999999999999987789999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
|.. ....+..++...+++|+.++.+|+++|++.+ + ++|++||..||+..... .+ ..|+.+..+.+.|+.
T Consensus 89 ~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~-----~~-~~E~~~~~~~~~Y~~ 159 (357)
T 1rkx_A 89 AQP---LVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWI-----WG-YRENEAMGGYDPYSN 159 (357)
T ss_dssp SCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSS-----SC-BCTTSCBCCSSHHHH
T ss_pred CCc---ccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcC-----CC-CCCCCCCCCCCccHH
Confidence 965 4445567788899999999999999999986 5 78889999999765431 11 344555667799999
Q ss_pred hHHHHHHHHHhccCee---------EeEEeeeecCCCCChhh-----H----HHHhhcccceeec----CCCcccHhhHH
Q 005949 518 TKAMVEELLKEYDNVC---------TLRVRMPISSDLNNPRN-----F----ITKISRYNKVVNI----PNSMTVLDELL 575 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~---------~l~~~~~r~~~~~g~~~-----~----~~~~~~~~~~~~~----~~~~~~v~D~a 575 (668)
+|..+|++++.+...+ +++++++|++++|||.. + +..+..+...... ..+|+|++|+|
T Consensus 160 sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva 239 (357)
T 1rkx_A 160 SKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL 239 (357)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHH
Confidence 9999999999875433 89999999999999862 3 3334444433221 22899999999
Q ss_pred HHHHHHHhc------cCCceeeecCC--CccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhc
Q 005949 576 PISIEMAKR------NLRGIWNFTNP--GVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEF 647 (668)
Q Consensus 576 ~~~~~~~~~------~~~g~~ni~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~ 647 (668)
++++.++++ ..+++||++++ +.+|+.|+++.+++.+|.+..+...+.. .+.......+|++|+++.+
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~l 314 (357)
T 1rkx_A 240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA-----HPHEAHYLKLDCSKAKMQL 314 (357)
T ss_dssp HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------CCCCCCBCCHHHHHHH
T ss_pred HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC-----CCcCcccccCCHHHHHHHh
Confidence 999999874 35789999984 6899999999999999987654322211 1222345689999999977
Q ss_pred C--CccChHHHHHHHHhccC
Q 005949 648 P--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 648 g--~~~~~~~~l~~~~~~~~ 665 (668)
| +..+++++|+++++++.
T Consensus 315 G~~p~~~l~e~l~~~~~~~~ 334 (357)
T 1rkx_A 315 GWHPRWNLNTTLEYIVGWHK 334 (357)
T ss_dssp CCCCCCCHHHHHHHHHHHHH
T ss_pred CCCcCCcHHHHHHHHHHHHH
Confidence 7 33599999999998863
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=287.63 Aligned_cols=269 Identities=16% Similarity=0.128 Sum_probs=206.9
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHc--CCccc----------------ccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKE--GIPFE----------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~--g~~v~----------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
|+|+|+||||+||||++|+++|+++ |++|. ++.+|++|.+++.++++..++|+|||+|+..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~- 79 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL- 79 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC-
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC-
Confidence 3578999999999999999999999 88652 4568999999999999866779999999966
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
.. .+..++...+++|+.++.+|+++|++.++ ++|++||..+|+.....+ ..+|+.+..|.+.|+.+|..+
T Consensus 80 --~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~------~~~e~~~~~~~~~Y~~sK~~~ 150 (312)
T 2yy7_A 80 --SA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKE------NTPQYTIMEPSTVYGISKQAG 150 (312)
T ss_dssp --HH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSS------SBCSSCBCCCCSHHHHHHHHH
T ss_pred --CC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCC------CccccCcCCCCchhHHHHHHH
Confidence 22 23467788899999999999999999998 788889999997643221 366677777889999999999
Q ss_pred HHHHHhccCeeEeEEeeeecCCCCChh--------h-HHH---Hhhcccceeec-----CCCcccHhhHHHHHHHHHhcc
Q 005949 523 EELLKEYDNVCTLRVRMPISSDLNNPR--------N-FIT---KISRYNKVVNI-----PNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 523 E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~-~~~---~~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|++++.+.+.++++++++|++++|||. + +.. ..+..++.... ..+|+|++|+|++++.+++++
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 230 (312)
T 2yy7_A 151 ERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230 (312)
T ss_dssp HHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 999998876678999999999999953 1 222 22333333222 238999999999999999875
Q ss_pred C-----CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-C-ccChHHHHH
Q 005949 586 L-----RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-E-LLSIKDSLI 658 (668)
Q Consensus 586 ~-----~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~-~~~~~~~l~ 658 (668)
. +++||+++ +.+|+.|+++.+++.+|. ..+...+... ..........+|++|+++.+| . ..+++++|+
T Consensus 231 ~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~---~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~ 305 (312)
T 2yy7_A 231 VEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFR---QKIADSWPASIDDSQAREDWDWKHTFDLESMTK 305 (312)
T ss_dssp GGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTH---HHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred ccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCcc---ccccccccccCCHHHHHHHcCCCCCCCHHHHHH
Confidence 2 37999997 899999999999999983 2222112100 001111235789999999777 3 358999999
Q ss_pred HHHhccC
Q 005949 659 KYVFEPN 665 (668)
Q Consensus 659 ~~~~~~~ 665 (668)
+++++++
T Consensus 306 ~~~~~~k 312 (312)
T 2yy7_A 306 DMIEHLS 312 (312)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998864
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=292.58 Aligned_cols=271 Identities=20% Similarity=0.262 Sum_probs=212.6
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
+||+||||||+||||++|+++|+++|++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--d~Vih~A~~~- 104 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV--DHVFNLAADM- 104 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC--SEEEECCCCC-
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCC--CEEEECceec-
Confidence 46899999999999999999999999865 24568999999999999855 9999999966
Q ss_pred CCCc-cccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC-CCCCCCcchhhHH
Q 005949 444 RPNV-DWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT-PNFTGSFYSKTKA 520 (668)
Q Consensus 444 ~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~-~~~~~~~Y~~sK~ 520 (668)
.. .++..++...+++|+.++.+++++|++.++ ++|++||..+|+.....+ ....++.|++. +..|.+.|+.+|.
T Consensus 105 --~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~-~~~~~~~E~~~~~~~~~~~Y~~sK~ 181 (379)
T 2c5a_A 105 --GGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLE-TTNVSLKESDAWPAEPQDAFGLEKL 181 (379)
T ss_dssp --CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSS-SSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred --CcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCC-ccCCCcCcccCCCCCCCChhHHHHH
Confidence 22 222567788899999999999999999998 788999999998643311 00111333321 4566789999999
Q ss_pred HHHHHHHhccCeeEeEEeeeecCCCCChhh------------HHHHhhcccc-eeec-----CCCcccHhhHHHHHHHHH
Q 005949 521 MVEELLKEYDNVCTLRVRMPISSDLNNPRN------------FITKISRYNK-VVNI-----PNSMTVLDELLPISIEMA 582 (668)
Q Consensus 521 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~-~~~~-----~~~~~~v~D~a~~~~~~~ 582 (668)
.+|++++.+.+..+++++++|++++|||.. |+..+..+.. .... ..+++|++|+|++++.++
T Consensus 182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l 261 (379)
T 2c5a_A 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261 (379)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence 999999988766789999999999999852 4444544543 2222 238999999999999999
Q ss_pred hccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc-cChHHHHHHH
Q 005949 583 KRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL-LSIKDSLIKY 660 (668)
Q Consensus 583 ~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~-~~~~~~l~~~ 660 (668)
+++.+++||+++++.+|+.|+++.+.+.+|.+.++..++.+ .......+|++|+++.+| .+ .+++++|+++
T Consensus 262 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 334 (379)
T 2c5a_A 262 KSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP-------EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRIT 334 (379)
T ss_dssp HSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC-------CCCSBCEECCHHHHHHHSCCCCCCHHHHHHHH
T ss_pred hccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCC-------CCcccccCCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 88778899999999999999999999999987654433321 122345789999999877 44 4899999999
Q ss_pred HhccC
Q 005949 661 VFEPN 665 (668)
Q Consensus 661 ~~~~~ 665 (668)
+++++
T Consensus 335 ~~~~~ 339 (379)
T 2c5a_A 335 YFWIK 339 (379)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98874
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=288.19 Aligned_cols=265 Identities=17% Similarity=0.199 Sum_probs=208.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc---C---Cccc------------------------ccccccCChhHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKE---G---IPFE------------------------YGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~---g---~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d 433 (668)
||||||||+||||++++++|+++ | ++|. ++.+|++|++++.+++.+ +|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRG--VD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTT--CC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcC--CC
Confidence 68999999999999999999996 7 6542 345788999999888865 59
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
+|||+||.. ....+..++..++++|+.++.+++++|.+.++ ++|++||..+|+.....| .+|+.+..|.
T Consensus 79 ~Vih~A~~~---~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~-------~~E~~~~~~~ 148 (337)
T 1r6d_A 79 AIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS-------WTESSPLEPN 148 (337)
T ss_dssp EEEECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSC-------BCTTSCCCCC
T ss_pred EEEECCCcc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCC-------CCCCCCCCCC
Confidence 999999976 44445567888999999999999999999988 788999999998654433 4555666777
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecC-----CCcccHhhHHHHHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTVLDELLPISI 579 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~ 579 (668)
+.|+.||..+|++++.+.+..+++++++|++++|||.. ++..+..+......+ .+++|++|+|++++
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 228 (337)
T 1r6d_A 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA 228 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHH
Confidence 99999999999999988766789999999999999862 344445554433222 27999999999999
Q ss_pred HHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHH
Q 005949 580 EMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDS 656 (668)
Q Consensus 580 ~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~ 656 (668)
.+++++ .+++||+++++.+|+.|+++.+++.+|.+.+..... ...+.......+|++|+++.+| +..+++++
T Consensus 229 ~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~ 303 (337)
T 1r6d_A 229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV-----ADRKGHDLRYSLDGGKIERELGYRPQVSFADG 303 (337)
T ss_dssp HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEE-----CCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred HHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceec-----CCCCCCcceeecCHHHHHHHcCCCCCCCHHHH
Confidence 999866 567999999999999999999999999864311110 0001111234689999998777 34689999
Q ss_pred HHHHHhccC
Q 005949 657 LIKYVFEPN 665 (668)
Q Consensus 657 l~~~~~~~~ 665 (668)
|+++++++.
T Consensus 304 l~~~~~~~~ 312 (337)
T 1r6d_A 304 LARTVRWYR 312 (337)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=290.65 Aligned_cols=273 Identities=18% Similarity=0.203 Sum_probs=211.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhcCCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~~~d 433 (668)
||+|+||||+||||++++++|+++|++|. ++.+|++|.+++.++++++++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 57999999999999999999999997542 3457899999999999987889
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC----cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI----LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~----~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
+|||+||.. ....+..++...+++|+.++.+++++|++.++ ++|++||..+|+.....| .+|+.+.
T Consensus 81 ~vih~A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~-------~~E~~~~ 150 (372)
T 1db3_A 81 EVYNLGAMS---HVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP-------QKETTPF 150 (372)
T ss_dssp EEEECCCCC---TTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS-------BCTTSCC
T ss_pred EEEECCccc---CccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCC-------CCccCCC
Confidence 999999976 34444566778889999999999999999885 788999999997654433 4555666
Q ss_pred CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---h--------HHHHhhcccc-eeecC-----CCcccHh
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---N--------FITKISRYNK-VVNIP-----NSMTVLD 572 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~--------~~~~~~~~~~-~~~~~-----~~~~~v~ 572 (668)
.|.+.|+.||..+|++++.+...++++++++|++++|||. . ++..+..+.. ....+ .+|+|++
T Consensus 151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~ 230 (372)
T 1db3_A 151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230 (372)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence 7779999999999999999877678999999999999984 1 2223333432 22222 2899999
Q ss_pred hHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHH-----------------------hhh--
Q 005949 573 ELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEE-----------------------QAK-- 627 (668)
Q Consensus 573 D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----------------------~~~-- 627 (668)
|+|++++.+++++.+++||+++++.+|+.|+++.+++.+|.+.++...+.+. ...
T Consensus 231 Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
T 1db3_A 231 DYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRY 310 (372)
T ss_dssp HHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGG
T ss_pred HHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccc
Confidence 9999999999877779999999999999999999999999765422100000 000
Q ss_pred hhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 628 VIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 628 ~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
..........+|++|+++.+| +..+++++|+++++++.
T Consensus 311 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~ 350 (372)
T 1db3_A 311 FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL 350 (372)
T ss_dssp CCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred cCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHH
Confidence 011112245679999999777 34689999999998874
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=283.25 Aligned_cols=268 Identities=11% Similarity=0.146 Sum_probs=197.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcC-Ccccc-----------------cccccCChhHHHHHhhhc---CCCEEEEcccccC
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEG-IPFEY-----------------GKGRLEDCSSLIADVQSV---KPTHVFNAAGVTG 443 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g-~~v~~-----------------~~~D~~d~~~~~~~l~~~---~~d~Vih~a~~~~ 443 (668)
||+||||+||||++|+++|+++| ++|.. +.+|++|.+.+.+++++. ++|+|||+|+..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~- 79 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS- 79 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC-
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcccc-
Confidence 49999999999999999999999 76632 346777888888888752 579999999976
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
.. +..++...+++|+.++.+++++|++.++++|++||..+|+.....| .+|+.+..|.+.|+.+|..+|
T Consensus 80 --~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~-------~~E~~~~~p~~~Y~~sK~~~e 148 (310)
T 1eq2_A 80 --ST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-------IESREYEKPLNVYGYSKFLFD 148 (310)
T ss_dssp --CT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB-------CSSGGGCCCSSHHHHHHHHHH
T ss_pred --cC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCC-------CCCCCCCCCCChhHHHHHHHH
Confidence 22 3456778899999999999999999988999999999997654333 455556677799999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChhh------------HHHHhhcccceee-----c-CCCcccHhhHHHHHHHHHhcc
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVN-----I-PNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~-----~-~~~~~~v~D~a~~~~~~~~~~ 585 (668)
++++.+.+..+++++++|++++|||.. ++..+..+..... . ..+++|++|+|++++.+++++
T Consensus 149 ~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~ 228 (310)
T 1eq2_A 149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228 (310)
T ss_dssp HHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC
Confidence 999998776789999999999999852 3333444443221 2 447899999999999999876
Q ss_pred CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 586 LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 586 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+++||+++++.+|+.|+++.+.+.+|.+ .+...+.+.. ..........+|++|++++++ +.++++++|++++++
T Consensus 229 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~ 305 (310)
T 1eq2_A 229 VSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDK--LKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAW 305 (310)
T ss_dssp CCEEEEESCSCCBCHHHHHHHC------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChh--hhcccccccccchHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 68899999999999999999999999987 2222222211 001112346789999998655 457999999999999
Q ss_pred cCCC
Q 005949 664 PNKK 667 (668)
Q Consensus 664 ~~~~ 667 (668)
++++
T Consensus 306 ~~~~ 309 (310)
T 1eq2_A 306 LNRD 309 (310)
T ss_dssp TC--
T ss_pred HHhc
Confidence 8754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-33 Score=286.87 Aligned_cols=268 Identities=11% Similarity=0.157 Sum_probs=208.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-Ccccc-----------------cccccCChhHHHHHhhhc---CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG-IPFEY-----------------GKGRLEDCSSLIADVQSV---KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g-~~v~~-----------------~~~D~~d~~~~~~~l~~~---~~d~Vih~a~~~ 442 (668)
|+|+||||+||||++|+++|+++| ++|.. +.+|++|.+.+.+++++. ++|+|||+|+..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~ 126 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 126 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCccc
Confidence 689999999999999999999999 76532 336777888888887742 479999999976
Q ss_pred CCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 443 GRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
.. +..++...+++|+.++.+|+++|++.++++|++||..+|+.....| .+|+.+..|.+.|+.+|..+
T Consensus 127 ---~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~-------~~E~~~~~p~~~Y~~sK~~~ 194 (357)
T 2x6t_A 127 ---ST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-------IESREYEKPLNVFGYSKFLF 194 (357)
T ss_dssp ---CT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCC-------CSSGGGCCCSSHHHHHHHHH
T ss_pred ---CC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCC-------cCCcCCCCCCChhHHHHHHH
Confidence 22 3456778899999999999999999888999999999997654433 45555667779999999999
Q ss_pred HHHHHhccCeeEeEEeeeecCCCCChh--------h----HHHHhhcccceeec------CCCcccHhhHHHHHHHHHhc
Q 005949 523 EELLKEYDNVCTLRVRMPISSDLNNPR--------N----FITKISRYNKVVNI------PNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 523 E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~----~~~~~~~~~~~~~~------~~~~~~v~D~a~~~~~~~~~ 584 (668)
|++++.+.+..+++++++|++++|||. . ++..+..+...... ..+++|++|+|++++.++++
T Consensus 195 E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~ 274 (357)
T 2x6t_A 195 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274 (357)
T ss_dssp HHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc
Confidence 999999877678999999999999985 2 33344444433222 33789999999999999987
Q ss_pred cCCceeeecCCCccCHHHHHHHHHhhcCCC-CCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHH
Q 005949 585 NLRGIWNFTNPGVVSHNEILEMYKKYINPE-FKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYV 661 (668)
Q Consensus 585 ~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~ 661 (668)
+.+++||+++++.+|+.|+++.+++.+|.+ +.+.+.+.. ..........+|++|++++++ +.++++++|++++
T Consensus 275 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~ 350 (357)
T 2x6t_A 275 GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDK----LKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYM 350 (357)
T ss_dssp CCCEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGG----GTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHH
T ss_pred CCCCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcc----cccccccccccCHHHHHHcCCCCCCCCHHHHHHHHH
Confidence 668899999999999999999999999987 332222221 111112346789999998655 4579999999999
Q ss_pred hccCCC
Q 005949 662 FEPNKK 667 (668)
Q Consensus 662 ~~~~~~ 667 (668)
+++.++
T Consensus 351 ~~~~~~ 356 (357)
T 2x6t_A 351 AWLNRD 356 (357)
T ss_dssp HHHC--
T ss_pred HHHhhc
Confidence 998653
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=286.15 Aligned_cols=272 Identities=17% Similarity=0.153 Sum_probs=212.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
|+||||||+||||+++++.|+++|++| .++.+|++|++++.++++++++|+|||+|
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 83 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA 83 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECC
Confidence 689999999999999999999999864 23567999999999999988899999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
|.. ....+..++...+++|+.|+.+++++|.+.++ ++|++||..+||.....| ..|+.+..|.+.|+.
T Consensus 84 ~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~-------~~e~~~~~~~~~Y~~ 153 (345)
T 2z1m_A 84 AQS---FVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIP-------QTEKTPFYPRSPYAV 153 (345)
T ss_dssp CCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHH
T ss_pred CCc---chhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCC-------CCccCCCCCCChhHH
Confidence 976 44445667888899999999999999999884 788999999998765444 455566677799999
Q ss_pred hHHHHHHHHHhccCeeEeEEeeeecCCCCChhh---H--------HHHhhccccee-ec-----CCCcccHhhHHHHHHH
Q 005949 518 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---F--------ITKISRYNKVV-NI-----PNSMTVLDELLPISIE 580 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---~--------~~~~~~~~~~~-~~-----~~~~~~v~D~a~~~~~ 580 (668)
||..+|++++.+...++++++++|++++|||+. + +.++..+.... .. ..+++|++|+|++++.
T Consensus 154 sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~ 233 (345)
T 2z1m_A 154 AKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWL 233 (345)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHH
Confidence 999999999998766788889999999999851 1 22223332211 11 2279999999999999
Q ss_pred HHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHH-------------hhh--hhccCCCCCccChhHHHh
Q 005949 581 MAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEE-------------QAK--VIVAPRSNNEMDASKLKK 645 (668)
Q Consensus 581 ~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------------~~~--~~~~~~~~~~ld~~k~~~ 645 (668)
+++++.+++||+++++.+|+.|+++.+++.+|.+.++...+.+. ... ..+.......+|++|+++
T Consensus 234 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 313 (345)
T 2z1m_A 234 MMQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMK 313 (345)
T ss_dssp HHTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred HHhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHH
Confidence 99887779999999999999999999999999875432111100 000 011112234679999998
Q ss_pred hcC--CccChHHHHHHHHhccC
Q 005949 646 EFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 646 ~~g--~~~~~~~~l~~~~~~~~ 665 (668)
.+| +..+++++|+++++++.
T Consensus 314 ~lG~~p~~~~~~~l~~~~~~~~ 335 (345)
T 2z1m_A 314 KLGWKPRTTFDELVEIMMEADL 335 (345)
T ss_dssp HHCCCCCSCHHHHHHHHHHHHH
T ss_pred HcCCcccCCHHHHHHHHHHHHH
Confidence 777 34689999999998864
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=286.45 Aligned_cols=266 Identities=16% Similarity=0.159 Sum_probs=203.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
|+||||||+||||+++++.|+++|++|. ++.+|++|++++.+++++.++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 6899999999999999999999998653 245689999999999987678999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC-CCCCcch
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN-FTGSFYS 516 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~-~~~~~Y~ 516 (668)
||.. .......++...+++|+.++.+++++|++.++ ++|++||..+|+.....| .+|+.+. ++.+.|+
T Consensus 81 A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~-------~~e~~~~~~~~~~Y~ 150 (338)
T 1udb_A 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIP-------YVESFPTGTPQSPYG 150 (338)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSS-------BCTTSCCCCCSSHHH
T ss_pred CccC---ccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCC-------cCcccCCCCCCChHH
Confidence 9976 33334456778899999999999999999887 788889999997654333 3444444 3368999
Q ss_pred hhHHHHHHHHHhccCee-EeEEeeeecCCCCChh--------------hHHHHhh---c--ccceeec-----------C
Q 005949 517 KTKAMVEELLKEYDNVC-TLRVRMPISSDLNNPR--------------NFITKIS---R--YNKVVNI-----------P 565 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~~-~l~~~~~r~~~~~g~~--------------~~~~~~~---~--~~~~~~~-----------~ 565 (668)
.||.++|++++.+.... +++++++|++++|||. +++..+. . ....... .
T Consensus 151 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 230 (338)
T 1udb_A 151 KSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCcee
Confidence 99999999999876544 7999999999988872 2333322 1 1111111 1
Q ss_pred CCcccHhhHHHHHHHHHhcc---C-CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 566 NSMTVLDELLPISIEMAKRN---L-RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 566 ~~~~~v~D~a~~~~~~~~~~---~-~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
.+|+|++|+|++++.++++. . .++||+++++++|+.|+++.+++.+|.+.++...+. .........+|++
T Consensus 231 ~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~ 304 (338)
T 1udb_A 231 RDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR------REGDLPAYWADAS 304 (338)
T ss_dssp ECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC------CTTCCSBCCBCCH
T ss_pred eeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC------CCCchhhhhcCHH
Confidence 27999999999999998752 2 269999999999999999999999998755332221 1122234578999
Q ss_pred HHHhhcC--CccChHHHHHHHHhccC
Q 005949 642 KLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 642 k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
|+++.+| +..+++++|+++++|+.
T Consensus 305 k~~~~lG~~p~~~l~~~l~~~~~w~~ 330 (338)
T 1udb_A 305 KADRELNWRVTRTLDEMAQDTWHWQS 330 (338)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence 9988777 34599999999998874
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=286.95 Aligned_cols=262 Identities=16% Similarity=0.202 Sum_probs=203.8
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccccccc-----------------------ccCChhHHHHHhhhcCCCEEEEc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKG-----------------------RLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~-----------------------D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
.||+||||||+||||++|++.|+++|++|..+.. |+.+. .+. ++|+|||+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~d~vih~ 98 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYI--EVDQIYHL 98 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCC--CCSEEEEC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhc--CCCEEEEC
Confidence 3579999999999999999999999998754432 22221 122 46999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCC----CCCCCCCc
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEED----TPNFTGSF 514 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~----~~~~~~~~ 514 (668)
|+.. ....+..++...+++|+.++.+|+++|++.++++|++||..+|+.....| +.|++ .+..|.+.
T Consensus 99 A~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~------~~E~~~~~~~~~~~~~~ 169 (343)
T 2b69_A 99 ASPA---SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHP------QSEDYWGHVNPIGPRAC 169 (343)
T ss_dssp CSCC---SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSS------BCTTCCCBCCSSSTTHH
T ss_pred cccc---CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCC------CcccccccCCCCCCCCc
Confidence 9976 33334557778899999999999999999999999999999998655444 23322 45566788
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh----------hHHHHhhcccceeecC-----CCcccHhhHHHHHH
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIP-----NSMTVLDELLPISI 579 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~ 579 (668)
|+.+|..+|++++.+.+..+++++++|++++|||. .++..++.++.....+ .+++|++|+|++++
T Consensus 170 Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~ 249 (343)
T 2b69_A 170 YDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLV 249 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHH
Confidence 99999999999998876679999999999999995 2445555555443322 27999999999999
Q ss_pred HHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHH
Q 005949 580 EMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSL 657 (668)
Q Consensus 580 ~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l 657 (668)
.+++++.+++||+++++.+|+.|+++.+++.+|.+.++...+.. ........+|++|+++.+| +..+++++|
T Consensus 250 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~------~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l 323 (343)
T 2b69_A 250 ALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA------QDDPQKRKPDIKKAKLMLGWEPVVPLEEGL 323 (343)
T ss_dssp HHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC------TTCCCCCCBCCHHHHHHHCCCCCSCHHHHH
T ss_pred HHHhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCC------CCCCceecCCHHHHHHHcCCCCCCCHHHHH
Confidence 99987778899999999999999999999999987654433321 1122345789999998877 346899999
Q ss_pred HHHHhccC
Q 005949 658 IKYVFEPN 665 (668)
Q Consensus 658 ~~~~~~~~ 665 (668)
+++++++.
T Consensus 324 ~~~~~~~~ 331 (343)
T 2b69_A 324 NKAIHYFR 331 (343)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998864
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=291.51 Aligned_cols=273 Identities=12% Similarity=0.086 Sum_probs=208.6
Q ss_pred cEEEEEcCCcchhHHHHHHHH-HcCCccc-----------------------------------------ccccccCChh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCE-KEGIPFE-----------------------------------------YGKGRLEDCS 421 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~-~~g~~v~-----------------------------------------~~~~D~~d~~ 421 (668)
|+||||||+||||+++++.|+ ++|++|. ++.+|++|++
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 699999999999999999999 9987542 3456888999
Q ss_pred HHHHHhhhcC-CCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCC-CCC
Q 005949 422 SLIADVQSVK-PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHP-EGS 498 (668)
Q Consensus 422 ~~~~~l~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p-~~~ 498 (668)
++.++++... +|+|||+||.. ....+..++...+++|+.++.+|+++|++.++ ++|++||..+|+...... ...
T Consensus 83 ~~~~~~~~~~~~d~vih~A~~~---~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~ 159 (397)
T 1gy8_A 83 FLNGVFTRHGPIDAVVHMCAFL---AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN 159 (397)
T ss_dssp HHHHHHHHSCCCCEEEECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred HHHHHHHhcCCCCEEEECCCcc---CcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccc
Confidence 9999998655 79999999976 33334567788999999999999999999988 788899999997654100 000
Q ss_pred CCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh-------------hHHHHh--------hc
Q 005949 499 GIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-------------NFITKI--------SR 557 (668)
Q Consensus 499 ~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-------------~~~~~~--------~~ 557 (668)
.. ..+|+.+..|.+.|+.||.++|++++.+...++++++++|++++|||. .++..+ ..
T Consensus 160 ~~-~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 160 AE-PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CC-CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cc-CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 11 245556667779999999999999999876679999999999999883 244433 23
Q ss_pred ccc------------eeecC-----------CCcccHhhHHHHHHHHHhcc--CC--------ceeeecCCCccCHHHHH
Q 005949 558 YNK------------VVNIP-----------NSMTVLDELLPISIEMAKRN--LR--------GIWNFTNPGVVSHNEIL 604 (668)
Q Consensus 558 ~~~------------~~~~~-----------~~~~~v~D~a~~~~~~~~~~--~~--------g~~ni~~~~~~s~~e~~ 604 (668)
+.. ....+ .+|+|++|+|++++.++++. .+ ++||+++++.+|+.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~ 318 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence 321 21111 27999999999999999763 22 79999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc-c-ChHHHHHHHHhccCC
Q 005949 605 EMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL-L-SIKDSLIKYVFEPNK 666 (668)
Q Consensus 605 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~-~-~~~~~l~~~~~~~~~ 666 (668)
+.+.+.+|.+.++...+. .........+|++|+++.+| .+ . +++++|+++++|+.+
T Consensus 319 ~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~ 377 (397)
T 1gy8_A 319 EVARKTTGHPIPVRECGR------REGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRT 377 (397)
T ss_dssp HHHHHHHCCCCCEEEECC------CTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCeeeCCC------CCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHh
Confidence 999999998765432221 11222345789999998877 33 3 899999999998854
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-33 Score=288.75 Aligned_cols=269 Identities=21% Similarity=0.196 Sum_probs=210.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------ccccccCChhHHHHHhhhcCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------YGKGRLEDCSSLIADVQSVKP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------~~~~D~~d~~~~~~~l~~~~~ 432 (668)
||+||||||+||||++|++.|+++|++|. ++.+|++|.+++.++++++++
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 107 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 107 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence 36899999999999999999999998652 234688899999999998888
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC------cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI------LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~------~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||.. ....+..++...+++|+.++.+|+++|.+.++ ++|++||..+|+.... | .+|+
T Consensus 108 d~Vih~A~~~---~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~-------~~E~ 176 (381)
T 1n7h_A 108 DEVYNLAAQS---HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-P-------QSET 176 (381)
T ss_dssp SEEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-S-------BCTT
T ss_pred CEEEECCccc---CccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-C-------CCCC
Confidence 9999999976 44444567888899999999999999998764 7889999999976543 4 4555
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---hH--------HHHhhcccce-eecC-----CCcc
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NF--------ITKISRYNKV-VNIP-----NSMT 569 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~--------~~~~~~~~~~-~~~~-----~~~~ 569 (668)
.+..|.+.|+.+|..+|++++.+...++++++++|++++|||. .+ +..+..+... ...+ .+|+
T Consensus 177 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v 256 (381)
T 1n7h_A 177 TPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG 256 (381)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeE
Confidence 5667779999999999999999877678999999999999985 12 2223334322 1122 2799
Q ss_pred cHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCC-CCCCHHHhhhhhccCCCCCccChhHHHhhcC
Q 005949 570 VLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKW-VNFTLEEQAKVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g 648 (668)
|++|+|++++.+++++.+++||+++++.+|+.|+++.+.+.+|.+... ..+... ...+.......+|++|+++.+|
T Consensus 257 ~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~d~~k~~~~lG 333 (381)
T 1n7h_A 257 FAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQR---YFRPAEVDNLQGDASKAKEVLG 333 (381)
T ss_dssp EHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGG---GSCSSCCCBCCBCCHHHHHHHC
T ss_pred EHHHHHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcc---cCCccccccccCCHHHHHHhcC
Confidence 999999999999998777999999999999999999999999976321 111110 0112222345779999999777
Q ss_pred -C-ccChHHHHHHHHhccC
Q 005949 649 -E-LLSIKDSLIKYVFEPN 665 (668)
Q Consensus 649 -~-~~~~~~~l~~~~~~~~ 665 (668)
. ..+++++|+++++++.
T Consensus 334 ~~p~~~l~e~l~~~~~~~~ 352 (381)
T 1n7h_A 334 WKPQVGFEKLVKMMVDEDL 352 (381)
T ss_dssp CCCCSCHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHH
Confidence 3 3689999999998864
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=287.73 Aligned_cols=278 Identities=17% Similarity=0.167 Sum_probs=210.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CCccc------------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKE-GIPFE------------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~-g~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
||||||||+||||+++++.|+++ |++|. ++.+|++|.+++.++++..++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 68999999999999999999998 67542 345789999999999986567999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHc--CC--------cEEEEecceeEeecCCC-C--CCCCCCCCCC
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--GI--------LMMNYATGCIFEYDAAH-P--EGSGIGYKEE 505 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--~~--------~~v~~sS~~vy~~~~~~-p--~~~~~~~~ee 505 (668)
||.. ....+..++...+++|+.|+.+++++|.+. ++ ++|++||..+|+..... + ........+|
T Consensus 81 A~~~---~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E 157 (361)
T 1kew_A 81 AAES---HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCC---CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred CCCc---ChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCC
Confidence 9976 444456678889999999999999999988 75 78889999999754310 0 0000012455
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecC-----CCcccHh
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIP-----NSMTVLD 572 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~-----~~~~~v~ 572 (668)
+.+..+.+.|+.||..+|++++.+...++++++++|++++|||.. ++..+..+......+ .+++|++
T Consensus 158 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 237 (361)
T 1kew_A 158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence 556677799999999999999998766789999999999999962 334444444433322 2799999
Q ss_pred hHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhh---hccCCCCCccChhHHHhhcC
Q 005949 573 ELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKV---IVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 573 D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~ld~~k~~~~~g 648 (668)
|+|++++.++++. .+++||+++++.+|+.|+++.+++.+|.+.+... +..+.... .........+|++|+++.+|
T Consensus 238 Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 316 (361)
T 1kew_A 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYREQITYVADRPGHDRRYAIDAGKISRELG 316 (361)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGGGGEEEECCCTTCCCBCCBCCHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccccceeecCCCCcccceeecCHHHHHHHhC
Confidence 9999999999876 4669999999999999999999999987543221 11110000 01111234789999999777
Q ss_pred --CccChHHHHHHHHhccC
Q 005949 649 --ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 649 --~~~~~~~~l~~~~~~~~ 665 (668)
+..+++++|+++++++.
T Consensus 317 ~~p~~~~~e~l~~~~~~~~ 335 (361)
T 1kew_A 317 WKPLETFESGIRKTVEWYL 335 (361)
T ss_dssp CCCSCCHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHH
Confidence 34689999999999874
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-33 Score=290.52 Aligned_cols=270 Identities=13% Similarity=0.082 Sum_probs=202.7
Q ss_pred CCCCcEEEEEcCCcchhHHHHHHHHHcCCcccc-----------------------------------------cccccC
Q 005949 380 RKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEY-----------------------------------------GKGRLE 418 (668)
Q Consensus 380 ~~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~-----------------------------------------~~~D~~ 418 (668)
.+.||+||||||+||||++|++.|+++|++|.. +.+|++
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 345789999999999999999999999986532 346889
Q ss_pred ChhHHHHHhhhcCCCEEEEcccccCCCCccccccccc---cceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCC
Q 005949 419 DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKT---DTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAA 493 (668)
Q Consensus 419 d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~---~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~ 493 (668)
|++++.+++++.++|+|||+||.. .......++. ..+++|+.|+.+|+++|++.++ ++|++||..+|+...
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~---~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~- 163 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQR---SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN- 163 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCC---CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-
T ss_pred CHHHHHHHHhccCCCEEEECCCCC---CccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-
Confidence 999999999986779999999976 3333333443 3778999999999999999885 788999999997543
Q ss_pred CCCCCCCCCCCCC-------------CCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh----------
Q 005949 494 HPEGSGIGYKEED-------------TPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN---------- 550 (668)
Q Consensus 494 ~p~~~~~~~~ee~-------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~---------- 550 (668)
.| +.|++ .+..|.+.|+.||..+|++++.+.+.++++++++||+++|||..
T Consensus 164 ~~------~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~ 237 (404)
T 1i24_A 164 ID------IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELR 237 (404)
T ss_dssp SC------BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGC
T ss_pred CC------CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccc
Confidence 22 22220 35567789999999999999988666799999999999999842
Q ss_pred ---------------HHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhccC--C--ceeeecCCCccCHHHHHHH
Q 005949 551 ---------------FITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRNL--R--GIWNFTNPGVVSHNEILEM 606 (668)
Q Consensus 551 ---------------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~~--~--g~~ni~~~~~~s~~e~~~~ 606 (668)
++..+..+......+ .+|+|++|+|++++.+++++. + ++||+++ +.+|+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~ 316 (404)
T 1i24_A 238 NRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASL 316 (404)
T ss_dssp CCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHH
T ss_pred cccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHH
Confidence 344455555443322 289999999999999998753 3 4999999 89999999999
Q ss_pred HHhh---cCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhcc
Q 005949 607 YKKY---INPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 607 i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~ 664 (668)
+++. +|.+.++...+... .........+|++|++++++ +..+++++++++++++
T Consensus 317 i~~~~~~~g~~~~~~~~p~~~----~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~ 374 (404)
T 1i24_A 317 VTKAGSKLGLDVKKMTVPNPR----VEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFA 374 (404)
T ss_dssp HHHHHHTTTCCCCEEEECCSS----CSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhCCCccccccCccc----CccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHH
Confidence 9998 78775533332110 00112245679999985433 4467899999988876
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=282.83 Aligned_cols=270 Identities=13% Similarity=0.101 Sum_probs=204.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
+||+|+||||+||||++++++|+++|++| .++.+|++|.+++.++++++ |+|||+|+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vih~a~~~- 88 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGL--DGVIFSAGYY- 88 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTC--SEEEEC-----
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCC--CEEEECCccC-
Confidence 45799999999999999999999999865 24567899999999999865 9999999965
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC----CCcchhh
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT----GSFYSKT 518 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~----~~~Y~~s 518 (668)
. .+..++...+++|+.++.+++++|.+.++ ++|++||..+|+...... .. +|+.+..| .+.|+.+
T Consensus 89 --~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~-----~~-~E~~~~~p~~~~~~~Y~~s 158 (342)
T 2x4g_A 89 --P--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGL-----PG-HEGLFYDSLPSGKSSYVLC 158 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSS-----CB-CTTCCCSSCCTTSCHHHHH
T ss_pred --c--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCC-----CC-CCCCCCCccccccChHHHH
Confidence 2 23457788899999999999999999997 889999999997654311 12 55566666 7899999
Q ss_pred HHHHHHHHHhccCeeEeEEeeeecCCCCChhh-------HHHHhhcccceee--cCCCcccHhhHHHHHHHHHhcc-CCc
Q 005949 519 KAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-------FITKISRYNKVVN--IPNSMTVLDELLPISIEMAKRN-LRG 588 (668)
Q Consensus 519 K~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~--~~~~~~~v~D~a~~~~~~~~~~-~~g 588 (668)
|..+|++++.+.+. +++++++|++++|||.. ++..+..+..... ...+++|++|+|++++.+++++ .++
T Consensus 159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~ 237 (342)
T 2x4g_A 159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGE 237 (342)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCc
Confidence 99999999998655 89999999999999853 4444444433222 2337999999999999999876 477
Q ss_pred eeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhh-----------------hcc----CCCCCccChhHHHhhc
Q 005949 589 IWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKV-----------------IVA----PRSNNEMDASKLKKEF 647 (668)
Q Consensus 589 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-----------------~~~----~~~~~~ld~~k~~~~~ 647 (668)
+||+++++ +|+.|+++.+.+.+|.+.++ .++....... ... ......+|++|+++.+
T Consensus 238 ~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 315 (342)
T 2x4g_A 238 RYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREEL 315 (342)
T ss_dssp EEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHH
T ss_pred eEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhC
Confidence 99999999 99999999999999988765 5554321100 000 0134578999999865
Q ss_pred C--CccChHHHHHHHHhccCCC
Q 005949 648 P--ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 648 g--~~~~~~~~l~~~~~~~~~~ 667 (668)
| .+++++++|+++++++.++
T Consensus 316 G~~~p~~~~~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 316 GFFSTTALDDTLLRAIDWFRDN 337 (342)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHc
Confidence 5 3588999999999987543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-32 Score=282.68 Aligned_cols=271 Identities=13% Similarity=0.122 Sum_probs=204.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CCcc-------------------cccccccCCh-hHHHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKE-GIPF-------------------EYGKGRLEDC-SSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~-g~~v-------------------~~~~~D~~d~-~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
|+|+||||+||||++++++|+++ |++| .++.+|++|. +.+.++++++ |+|||+||..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--d~vih~A~~~ 78 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLVAIA 78 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHC--SEEEECBCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCC--CEEEEccccc
Confidence 68999999999999999999998 8854 3456788874 5677788866 9999999976
Q ss_pred CCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC------CCCCCcch
Q 005949 443 GRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP------NFTGSFYS 516 (668)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~------~~~~~~Y~ 516 (668)
.......++...+++|+.++.+++++|++.+.++|++||..+|+.....+ +.|++.+ ..|.+.|+
T Consensus 79 ---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~------~~e~~~~~~~~~~~~~~~~Y~ 149 (345)
T 2bll_A 79 ---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKY------FDEDHSNLIVGPVNKPRWIYS 149 (345)
T ss_dssp ---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSS------BCTTTCCCBCCCTTCGGGHHH
T ss_pred ---CccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCC------cCCcccccccCcccCcccccH
Confidence 33334457778899999999999999999887888999999998654433 3343321 13446899
Q ss_pred hhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh----------------HHHHhhcccceeecC-----CCcccHhhHH
Q 005949 517 KTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN----------------FITKISRYNKVVNIP-----NSMTVLDELL 575 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~----------------~~~~~~~~~~~~~~~-----~~~~~v~D~a 575 (668)
.+|..+|++++.+.+..+++++++|++++|||.. ++..+..+......+ .+++|++|+|
T Consensus 150 ~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 229 (345)
T 2bll_A 150 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 229 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHH
Confidence 9999999999988766799999999999999852 333444554433322 2799999999
Q ss_pred HHHHHHHhcc----CCceeeecCCC-ccCHHHHHHHHHhhcCCCCCCCCCCHHHhh---------hhhccCCCCCccChh
Q 005949 576 PISIEMAKRN----LRGIWNFTNPG-VVSHNEILEMYKKYINPEFKWVNFTLEEQA---------KVIVAPRSNNEMDAS 641 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~~~ld~~ 641 (668)
++++.+++++ .+++||+++++ .+|+.|+++.+++.+|.+......+..... ...........+|++
T Consensus 230 ~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 309 (345)
T 2bll_A 230 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR 309 (345)
T ss_dssp HHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCH
T ss_pred HHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHH
Confidence 9999999864 35699999996 899999999999999876543322211000 000011234578999
Q ss_pred HHHhhcC--CccChHHHHHHHHhccC
Q 005949 642 KLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 642 k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
|+++.+| +..+++++|+++++++.
T Consensus 310 k~~~~lG~~p~~~l~~~l~~~~~~~~ 335 (345)
T 2bll_A 310 NAHRCLDWEPKIDMQETIDETLDFFL 335 (345)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccccHHHHHHHHHHHHH
Confidence 9998777 33689999999998874
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=7e-32 Score=271.22 Aligned_cols=270 Identities=14% Similarity=0.091 Sum_probs=197.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccC-----ChhHHHHHhhhcCCCEEEEcccccC-CCCccccccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE-----DCSSLIADVQSVKPTHVFNAAGVTG-RPNVDWCESHKTDT 457 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~-----d~~~~~~~l~~~~~d~Vih~a~~~~-~~~~~~~~~~~~~~ 457 (668)
|||||||||||||++|+++|+++||+|..+..+.. ..+...+.+++ +|+|||+|+... .+...|.......+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~--~d~vihla~~~i~~~~~~~~~~~~~~~ 78 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPS--CDAAVNLAGENILNPLRRWNETFQKEV 78 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCS--CSEEEECCCCCSSCTTSCCCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccC--CCEEEEeccCcccchhhhhhhhhhhhh
Confidence 79999999999999999999999999977654422 11222334444 599999998651 11123444556678
Q ss_pred eehhhhhhHHHHHHHHHcCC---cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeE
Q 005949 458 IRTNVAGTLTLADVCRDHGI---LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCT 534 (668)
Q Consensus 458 ~~~Nv~~~~~ll~~~~~~~~---~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 534 (668)
+++|+.+|.+|+++|++.+. .+++.||+.+|+.....+ .+|+.|..+.+.|+..|...|.... ....+
T Consensus 79 ~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~-------~~E~~p~~~~~~~~~~~~~~e~~~~--~~~~~ 149 (298)
T 4b4o_A 79 LGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAE-------YDEDSPGGDFDFFSNLVTKWEAAAR--LPGDS 149 (298)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCC-------BCTTCCCSCSSHHHHHHHHHHHHHC--CSSSS
T ss_pred hhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCc-------ccccCCccccchhHHHHHHHHHHHH--hhccC
Confidence 88999999999999999876 366778888998765554 6677777787889999998887643 34468
Q ss_pred eEEeeeecCCCCChh-hHHHHh---hccccee-----ecCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHH
Q 005949 535 LRVRMPISSDLNNPR-NFITKI---SRYNKVV-----NIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEIL 604 (668)
Q Consensus 535 l~~~~~r~~~~~g~~-~~~~~~---~~~~~~~-----~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~ 604 (668)
++++++|++.+|||. .++..+ ...+... ....+|+|++|+|++++.+++++ ..|+||+++++++|++|++
T Consensus 150 ~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~ 229 (298)
T 4b4o_A 150 TRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFA 229 (298)
T ss_dssp SEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHH
T ss_pred CceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHH
Confidence 999999999999996 222222 2222222 22348999999999999999876 6889999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCHHHhhhhhccC-----CCCCccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 605 EMYKKYINPEFKWVNFTLEEQAKVIVAP-----RSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 605 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
+.+++.+|++.. .++|........... ..+.+++++|+++++. ..++++++|+++++.+.
T Consensus 230 ~~ia~~lgrp~~-~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~ly 296 (298)
T 4b4o_A 230 QTFGAALGRRAF-IPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAENLY 296 (298)
T ss_dssp HHHHHHHTCCCC-CCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHHCC-
T ss_pred HHHHHHhCcCCc-ccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHHhhc
Confidence 999999998754 345543211110000 1245788999998766 34789999999998764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-31 Score=280.03 Aligned_cols=307 Identities=21% Similarity=0.198 Sum_probs=220.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccC-----------CCcCCCCeEEEEccCCCH
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLI-----------PSKASSNFKFVKGDIASA 69 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~-----------~~~~~~~~~~~~~Dl~d~ 69 (668)
+.+.+|+|||||||||||++|++.|+++ +++|++++|..... ....+. ......++.++.+|+.|.
T Consensus 65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~ 142 (427)
T 4f6c_A 65 SHRPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM 142 (427)
T ss_dssp CCCCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence 3445789999999999999999999877 78999998865311 000000 001135799999999998
Q ss_pred HHHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC--cCCCC
Q 005949 70 DLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED--AVVGN 147 (668)
Q Consensus 70 ~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~ 147 (668)
+.+. .+ .++|+|||+||.... ..++...+++|+.++.+++++|.+ + +++||++||..+ |..... .....
T Consensus 143 ~~l~-~~--~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~-G~~~~~~~~~~~~ 213 (427)
T 4f6c_A 143 DDVV-LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTF 213 (427)
T ss_dssp CCCC-CS--SCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG-GSEECSSCSCCEE
T ss_pred ccCC-Cc--CCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh-CCCccCCCCCccc
Confidence 8777 33 789999999998653 356678899999999999999998 4 799999999998 542111 11123
Q ss_pred CCCCC---CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCCceeec
Q 005949 148 HEASQ---LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 148 ~e~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 217 (668)
+|+++ ..|.+.|+.+|..+|.+++.+++ .+++++++||++||||..... ..+..+++....+..++. +
T Consensus 214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (427)
T 4f6c_A 214 SEADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-S 291 (427)
T ss_dssp CTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-H
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-c
Confidence 45444 45788999999999999999764 589999999999999987432 346778888777776654 4
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec---cCC-----------
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV---ENR----------- 283 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~~----------- 283 (668)
.+...++|++++|+|++++.++..+..+++||+++++++++.|+++.+.+ +|.+......+. ...
T Consensus 292 ~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~ 370 (427)
T 4f6c_A 292 MAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMYETIGLTSV 370 (427)
T ss_dssp HHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCchhhhhhhhc
Confidence 46789999999999999999998877889999999999999999999998 562110000000 000
Q ss_pred CCCCcccccChHHH----HhCCCcccCCHHHHHHHHHHHHhhC
Q 005949 284 PFNDQRYFLDDQKL----TSLGWSERTIWEEGLRKTIEWYTQN 322 (668)
Q Consensus 284 ~~~~~~~~~~~~k~----~~lG~~~~~~~~~~l~~~~~~~~~~ 322 (668)
........+|+++. +++||.+...-++.++.+++|+++.
T Consensus 371 ~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 371 DREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp HHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred cccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 00112345565554 4689988866677899999988875
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=269.69 Aligned_cols=238 Identities=24% Similarity=0.325 Sum_probs=197.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHh-CCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRN-YPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~-g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
|++|+||||||||+||++++++|+++ | ..+|++++|.... ...+.......+++++.+|++|.+.+.+++ .++|
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g-~~~V~~~~r~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~--~~~D 93 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTN-AKKIIVYSRDELK--QSEMAMEFNDPRMRFFIGDVRDLERLNYAL--EGVD 93 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCC-CSEEEEEESCHHH--HHHHHHHHCCTTEEEEECCTTCHHHHHHHT--TTCS
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCC-CCEEEEEECChhh--HHHHHHHhcCCCEEEEECCCCCHHHHHHHH--hcCC
Confidence 45689999999999999999999998 5 2388888885321 111111111357899999999999999998 6899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|||+||......++.++.+.+++|+.|+.+++++|.+.+ +++||++||..++ .|.++|+.+
T Consensus 94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~-----------------~p~~~Y~~s 155 (344)
T 2gn4_A 94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA-----------------NPINLYGAT 155 (344)
T ss_dssp EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS-----------------SCCSHHHHH
T ss_pred EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC-----------------CCccHHHHH
Confidence 9999999876554556778899999999999999999987 8999999997653 235789999
Q ss_pred HHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC-CceeecCCCceEeceeHHHHHHHHHHH
Q 005949 163 KAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGL-PLPIHGDGSNVRSYLYCEDVAEAFECI 238 (668)
Q Consensus 163 K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~ai~~~ 238 (668)
|..+|.+++.++.+ .+++++++||++||||++ ++++.+.+.+..++ ++.+ .++...++|+|++|+|++++.+
T Consensus 156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~---~~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~ 231 (344)
T 2gn4_A 156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKS 231 (344)
T ss_dssp HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT---SHHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC---CHHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHH
Confidence 99999999987753 479999999999999975 68888888888887 6776 4778889999999999999999
Q ss_pred HhcCCCCceEEEcCCCcccHHHHHHHHHHHh
Q 005949 239 LHKGEVGHVYNVGTKKERRVIDVAKDICKLF 269 (668)
Q Consensus 239 ~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~ 269 (668)
++.+..+++||+.++ .+++.|+++.+.+.+
T Consensus 232 l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 232 LKRMHGGEIFVPKIP-SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHCCSSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred HhhccCCCEEecCCC-cEEHHHHHHHHHHhC
Confidence 998777789999865 699999999997644
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=273.93 Aligned_cols=265 Identities=14% Similarity=0.148 Sum_probs=200.0
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc--------------------ccccccCChhHHHHHhhhcCCCEEEEcccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
.||+||||||+||||++++++|+++|++|. ++.+|++|++++.+++++.++|+|||+||.
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 367999999999999999999999998652 345789999999999988567999999997
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC-CcchhhH
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG-SFYSKTK 519 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~-~~Y~~sK 519 (668)
. ... +..++. +++|+.++.+|+++|.+.++ ++|++||..+|+.....+ .. ++.|++ .|. +.|+.+|
T Consensus 100 ~---~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~--~~-~~~E~~---~p~~~~Y~~sK 167 (333)
T 2q1w_A 100 Y---KDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQ--PV-RLDHPR---NPANSSYAISK 167 (333)
T ss_dssp C---SCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSS--SB-CTTSCC---CCTTCHHHHHH
T ss_pred c---CCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccC--CC-CcCCCC---CCCCCchHHHH
Confidence 6 222 233444 88999999999999999988 888999999987211110 01 244444 555 8999999
Q ss_pred HHHHHHHHh-ccCeeEeEEeeeecCCCCChh---h----HHHHhhccccee--ecCCCcccHhhHHHHHHHHHhccCCce
Q 005949 520 AMVEELLKE-YDNVCTLRVRMPISSDLNNPR---N----FITKISRYNKVV--NIPNSMTVLDELLPISIEMAKRNLRGI 589 (668)
Q Consensus 520 ~~~E~~~~~-~~~~~~l~~~~~r~~~~~g~~---~----~~~~~~~~~~~~--~~~~~~~~v~D~a~~~~~~~~~~~~g~ 589 (668)
..+|++++. +. +++++|++++|||. . ++..+..+.... ....+++|++|+|++++.+++++.+++
T Consensus 168 ~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~g~~ 242 (333)
T 2q1w_A 168 SANEDYLEYSGL-----DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGHGA 242 (333)
T ss_dssp HHHHHHHHHHTC-----CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHhhhC-----CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCCCCE
Confidence 999999988 76 67889999999986 2 333343333111 223489999999999999998655789
Q ss_pred eeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccCC
Q 005949 590 WNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 590 ~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~ 666 (668)
||+++++.+|+.|+++.+++.+|.+ .+...+... ...........+|++|+++.++ +..+++++|+++++++.+
T Consensus 243 ~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~--~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~ 317 (333)
T 2q1w_A 243 YHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRE--LGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFRE 317 (333)
T ss_dssp EECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEE--CCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred EEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCC--cccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 444333221 0001111456889999999933 447899999999988753
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=270.93 Aligned_cols=266 Identities=15% Similarity=0.125 Sum_probs=203.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHc--CCccc-------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKE--GIPFE-------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~--g~~v~-------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~ 449 (668)
|||||||+||||++++++|+++ |++|. ++.+|++|++++.++++..++|+|||+|+.. . ..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~---~-~~ 76 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL---S-AK 76 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC---H-HH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCccc---C-Cc
Confidence 4999999999999999999999 77653 3557999999999999866779999999965 2 22
Q ss_pred cccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHh
Q 005949 450 CESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528 (668)
Q Consensus 450 ~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~ 528 (668)
+..++...+++|+.++.+|+++|++.++ ++|++||..+|+...... ..+|+.+..|.+.|+.+|..+|++++.
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~------~~~e~~~~~p~~~Y~~sK~~~e~~~~~ 150 (317)
T 3ajr_A 77 GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKN------KVPSITITRPRTMFGVTKIAAELLGQY 150 (317)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSS------SBCSSSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCC------CccccccCCCCchHHHHHHHHHHHHHH
Confidence 3457788899999999999999999998 788899999997643211 356667777889999999999999998
Q ss_pred ccCeeEeEEeeeecCCCCChh--------h-H---HHHhhcccceee-----cCCCcccHhhHHHHHHHHHhccC-----
Q 005949 529 YDNVCTLRVRMPISSDLNNPR--------N-F---ITKISRYNKVVN-----IPNSMTVLDELLPISIEMAKRNL----- 586 (668)
Q Consensus 529 ~~~~~~l~~~~~r~~~~~g~~--------~-~---~~~~~~~~~~~~-----~~~~~~~v~D~a~~~~~~~~~~~----- 586 (668)
+.+.++++++++|++++||+. + + +...+..+.... ...+++|++|+|++++.+++++.
T Consensus 151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~ 230 (317)
T 3ajr_A 151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL 230 (317)
T ss_dssp HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence 876678999999999999853 1 1 222233333222 22388999999999999998652
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhcc
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~ 664 (668)
+++||+++ +.+|+.|+++.+.+.+|. ..+...+... ..........+|++|+++.+| +..+++++|+++++++
T Consensus 231 g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~---~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~ 305 (317)
T 3ajr_A 231 RNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFR---DKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHI 305 (317)
T ss_dssp CSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHH---HHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred CceEecCC-ccccHHHHHHHHHHHCCc-cccccccccc---hhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 47999997 689999999999999883 2221122110 001111235789999998877 3358999999999887
Q ss_pred C
Q 005949 665 N 665 (668)
Q Consensus 665 ~ 665 (668)
.
T Consensus 306 ~ 306 (317)
T 3ajr_A 306 S 306 (317)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-31 Score=279.69 Aligned_cols=259 Identities=20% Similarity=0.205 Sum_probs=198.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCC-CCEEEEEcCCCccCC-ccccCCC--------------cCCCCeEEEEccCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYP-EYKIVVLDKLDYCSN-LKNLIPS--------------KASSNFKFVKGDIA 67 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~-~~~v~~~~r~~~~~~-~~~~~~~--------------~~~~~~~~~~~Dl~ 67 (668)
.++|+|||||||||||++|+++|++++. +++|++++|...... ...+... ....+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 3578999999999999999999999854 489999998653211 0111000 01257999999998
Q ss_pred ------CHHHHHHHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCC
Q 005949 68 ------SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 68 ------d~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~ 141 (668)
|.+.+.+++ .++|+|||+||.... .++.+.+++|+.++.+++++|.+.+ +++|||+||+++|+....
T Consensus 151 ~~~~gld~~~~~~~~--~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~ 223 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLA--ETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEP 223 (478)
T ss_dssp SGGGGCCHHHHHHHH--HHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCT
T ss_pred CcccCCCHHHHHHHH--cCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCC
Confidence 667888888 479999999998764 4556788999999999999999876 899999999999988654
Q ss_pred CcCCCCCCCCCCCCC-----------ChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC-----CCCChHHHHHH
Q 005949 142 DAVVGNHEASQLLPT-----------NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-----FPEKLIPKFIL 205 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~-----------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~-----~~~~~~~~~~~ 205 (668)
... +|+.+..|. +.|+.+|..+|.+++.++++.+++++++||++|||++. ....++..++.
T Consensus 224 ~~~---~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~ 300 (478)
T 4dqv_A 224 SAF---TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL 300 (478)
T ss_dssp TTC---CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred CCc---CCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence 332 455444333 34999999999999999887799999999999999854 22346666666
Q ss_pred HHHcCCCcee--ec---C---CCceEeceeHHHHHHHHHHHHhc-----CCCCceEEEcCCCc--ccHHHHHHHHHHHhC
Q 005949 206 LAMRGLPLPI--HG---D---GSNVRSYLYCEDVAEAFECILHK-----GEVGHVYNVGTKKE--RRVIDVAKDICKLFS 270 (668)
Q Consensus 206 ~~~~~~~~~~--~~---~---~~~~~~~i~v~D~a~ai~~~~~~-----~~~~~~~ni~~~~~--~s~~el~~~i~~~~g 270 (668)
.....+..+. +. + +.+.++|+|++|+|++++.++.. ...+++||+++++. +|+.|+++.+.+. |
T Consensus 301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g 379 (478)
T 4dqv_A 301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G 379 (478)
T ss_dssp HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence 5554332221 11 1 25788999999999999998875 34578999999887 9999999999985 6
Q ss_pred CCC
Q 005949 271 MDP 273 (668)
Q Consensus 271 ~~~ 273 (668)
.+.
T Consensus 380 ~~~ 382 (478)
T 4dqv_A 380 YPI 382 (478)
T ss_dssp CSC
T ss_pred CCc
Confidence 653
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=251.45 Aligned_cols=222 Identities=18% Similarity=0.154 Sum_probs=175.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
||+|||||||||||+++++.|+++ +++|++++|.... ...+ ..+++++.+|+.|.+.+.+++ .++|+||
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~~~-----~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 72 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEK--IKIE-----NEHLKVKKADVSSLDEVCEVC--KGADAVI 72 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGG--CCCC-----CTTEEEECCCTTCHHHHHHHH--TTCSEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCccc--chhc-----cCceEEEEecCCCHHHHHHHh--cCCCEEE
Confidence 479999999999999999999999 6899999997432 1111 257999999999999999999 6899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+|+... .+ ...++.|+.++.++++++++.+ +++||++||.++|+...... .++.+..|.+.|+.+|..
T Consensus 73 ~~a~~~~-----~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~----~~~~~~~p~~~Y~~sK~~ 141 (227)
T 3dhn_A 73 SAFNPGW-----NN-PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLR----LMDSGEVPENILPGVKAL 141 (227)
T ss_dssp ECCCC------------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEE----GGGTTCSCGGGHHHHHHH
T ss_pred EeCcCCC-----CC-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCc----cccCCcchHHHHHHHHHH
Confidence 9998642 12 2367889999999999999987 89999999998876654322 345566788899999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-C
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~ 244 (668)
+|.+++.++++.+++++++||+++|||+.....+. .+....+.. +.. ++|+|++|+|++++.+++++. .
T Consensus 142 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~ 211 (227)
T 3dhn_A 142 GEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHH 211 (227)
T ss_dssp HHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCcccc
Confidence 99999988877799999999999999987543321 222233222 222 799999999999999999876 6
Q ss_pred CceEEEcCCCcccHH
Q 005949 245 GHVYNVGTKKERRVI 259 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~ 259 (668)
+++|+++++++.++.
T Consensus 212 g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 212 QERFTIGYLEHHHHH 226 (227)
T ss_dssp SEEEEEECCSCCC--
T ss_pred CcEEEEEeehhcccC
Confidence 889999999988875
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=263.85 Aligned_cols=250 Identities=11% Similarity=0.086 Sum_probs=187.3
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHcCCccc------------------ccccccCChhHHHHHhhhcCCCEEEEccccc
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
.|||||+|||+ ||||++|++.|+++|++|. ++.+|++|.+ +. ++|+|||+|+..
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~--~~d~vi~~a~~~ 74 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LD--GVTHLLISTAPD 74 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CT--TCCEEEECCCCB
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cC--CCCEEEECCCcc
Confidence 46789999998 9999999999999999753 3456666633 44 459999999966
Q ss_pred CCCCccccccccccceehhhhhhHHHHHHHHH--cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 443 GRPNVDWCESHKTDTIRTNVAGTLTLADVCRD--HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~--~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
... ...+.+++++|++ .++ ++|++||+.+|+.....| .+|+.+..|.+.|+.+|
T Consensus 75 ---~~~-------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~-------~~E~~~~~p~~~Y~~sK 131 (286)
T 3ius_A 75 ---SGG-------------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAW-------VDETTPLTPTAARGRWR 131 (286)
T ss_dssp ---TTB-------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCE-------ECTTSCCCCCSHHHHHH
T ss_pred ---ccc-------------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCC-------cCCCCCCCCCCHHHHHH
Confidence 111 1236789999998 666 788899999998765544 55666777889999999
Q ss_pred HHHHHHHHhccCeeEeEEeeeecCCCCChh-hHHHHhhcccceee----cCCCcccHhhHHHHHHHHHhcc-CCceeeec
Q 005949 520 AMVEELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVVN----IPNSMTVLDELLPISIEMAKRN-LRGIWNFT 593 (668)
Q Consensus 520 ~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~~----~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~ 593 (668)
+.+|++++.+ .+++++++|++++|||. ..+..+..+..... ...+++|++|+|++++.+++++ .+++||++
T Consensus 132 ~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~ 208 (286)
T 3ius_A 132 VMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVC 208 (286)
T ss_dssp HHHHHHHHHS---TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEEC
T ss_pred HHHHHHHHhh---cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEe
Confidence 9999999987 57999999999999996 23344444443222 2338999999999999999987 45699999
Q ss_pred CCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhh---hhccCCCCCccChhHHHhhcC-C-cc-ChHHHHHHHHhccC
Q 005949 594 NPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAK---VIVAPRSNNEMDASKLKKEFP-E-LL-SIKDSLIKYVFEPN 665 (668)
Q Consensus 594 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ld~~k~~~~~g-~-~~-~~~~~l~~~~~~~~ 665 (668)
+++.+|+.|+++.+++.+|.+.+.. ++...... ..........+|++|+++.+| . .. +++++|++++++..
T Consensus 209 ~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~~ 285 (286)
T 3ius_A 209 DDEPVPPQDVIAYAAELQGLPLPPA-VDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADAE 285 (286)
T ss_dssp CSCCBCHHHHHHHHHHHHTCCCCCE-EEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTCC
T ss_pred CCCCccHHHHHHHHHHHcCCCCCcc-cchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhcc
Confidence 9999999999999999999875431 11111000 000012356789999999877 3 33 79999999998864
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=269.52 Aligned_cols=258 Identities=18% Similarity=0.208 Sum_probs=197.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc--------------------ccccccCChhHHHHHhhhcCCCEEEEccccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
.|+||||||+||||+++++.|+++|++|. ++.+|++|.+++.++++..++|+|||+||..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 37999999999999999999999998652 3457899999999999855679999999976
Q ss_pred CCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHH
Q 005949 443 GRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAM 521 (668)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~ 521 (668)
... +..++. +++|+.++.+|+++|.+.++ ++|++||..+|+..... ..++.|++ .+.+.|+.+|..
T Consensus 100 ---~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~----~~~~~E~~---~~~~~Y~~sK~~ 166 (330)
T 2pzm_A 100 ---KDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATV----PIPIDSPT---APFTSYGISKTA 166 (330)
T ss_dssp ---SCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSS----SBCTTCCC---CCCSHHHHHHHH
T ss_pred ---CCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccC----CCCcCCCC---CCCChHHHHHHH
Confidence 222 233444 88999999999999999987 88899999998754322 00234443 566899999999
Q ss_pred HHHHHHhccCeeEeEEeeeecCCCCChh---hHH----HHhhcccceeec--CCCcccHhhHHH-HHHHHHhccCCceee
Q 005949 522 VEELLKEYDNVCTLRVRMPISSDLNNPR---NFI----TKISRYNKVVNI--PNSMTVLDELLP-ISIEMAKRNLRGIWN 591 (668)
Q Consensus 522 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~~~----~~~~~~~~~~~~--~~~~~~v~D~a~-~~~~~~~~~~~g~~n 591 (668)
+|++++.+ +++.+++|++++|||. .++ ..+..+.....- ..+++|++|+|+ +++.+++++.+++||
T Consensus 167 ~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~g~~~~ 242 (330)
T 2pzm_A 167 GEAFLMMS----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRPTGVFN 242 (330)
T ss_dssp HHHHHHTC----SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCCCEEEE
T ss_pred HHHHHHHc----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCCCCEEE
Confidence 99999887 6888999999999986 233 333333211111 347899999999 999999765578999
Q ss_pred ecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHH-----HhhcC-CccChHHHHHHHHhccC
Q 005949 592 FTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKL-----KKEFP-ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 592 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~-----~~~~g-~~~~~~~~l~~~~~~~~ 665 (668)
+++++.+|+.|+++.+++.+|.+ ++...+.. . ......+|++|+ +++++ +..+|+++|.++++++.
T Consensus 243 v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~------~-~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~ 314 (330)
T 2pzm_A 243 VSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVV------A-PGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYD 314 (330)
T ss_dssp ESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEE------C-CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHHHhCCC-CceeCCCC------c-chhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHH
Confidence 99999999999999999999987 44433321 1 223456778887 88444 44799999999998874
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.4e-31 Score=269.13 Aligned_cols=267 Identities=16% Similarity=0.116 Sum_probs=199.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC-------Ccc------------------cccccccCChhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG-------IPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g-------~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
+|+||||||+||||++++++|+++| ++| .++.+|++|++++.++++. ++|+|||
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih 92 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEA-RPDVIFH 92 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHT-CCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhc-CCCEEEE
Confidence 4799999999999999999999999 654 2356799999999888863 5699999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-----C-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-----I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-----~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||.. . ..+..++...+++|+.|+.+|+++|++.+ + ++|++||..+|+.....| .+|+.+..|
T Consensus 93 ~A~~~---~-~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~-------~~E~~~~~~ 161 (342)
T 2hrz_A 93 LAAIV---S-GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP-------IPDEFHTTP 161 (342)
T ss_dssp CCCCC---H-HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS-------BCTTCCCCC
T ss_pred CCccC---c-ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC-------cCCCCCCCC
Confidence 99966 2 23456778889999999999999999876 4 788999999997643333 455566667
Q ss_pred CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCC-hh-------hHH----HHhhcccceee-----cCCCcccHhhH
Q 005949 512 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNN-PR-------NFI----TKISRYNKVVN-----IPNSMTVLDEL 574 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g-~~-------~~~----~~~~~~~~~~~-----~~~~~~~v~D~ 574 (668)
.+.|+.+|.++|++++.+.+..+++.+++|++++|| |. .++ ..++.+..... ...+++|++|+
T Consensus 162 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dv 241 (342)
T 2hrz_A 162 LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSA 241 (342)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHH
Confidence 799999999999999998655677788888777776 43 233 33344443221 11257899999
Q ss_pred HHHHHHHHhcc-----CCceeeecCCCccCHHHHHHHHHhhcCCCCC--CCCCCHHHhhhhhccCCCCCccChhHHHhhc
Q 005949 575 LPISIEMAKRN-----LRGIWNFTNPGVVSHNEILEMYKKYINPEFK--WVNFTLEEQAKVIVAPRSNNEMDASKLKKEF 647 (668)
Q Consensus 575 a~~~~~~~~~~-----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~ 647 (668)
|++++.+++.+ .+++||++ ++.+|+.|+++.+++.+|.+.. +...+...... ........+|++|+++ +
T Consensus 242 a~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~-l 317 (342)
T 2hrz_A 242 VGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMR--MCEGWAPGFEAKRARE-L 317 (342)
T ss_dssp HHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHH--HHTTSCCCBCCHHHHH-T
T ss_pred HHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhh--hhcccccccChHHHHH-c
Confidence 99999999865 36799996 5789999999999999987641 21222111000 1111123689999999 6
Q ss_pred C--CccChHHHHHHHHhccC
Q 005949 648 P--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 648 g--~~~~~~~~l~~~~~~~~ 665 (668)
| +..+++++|+++++++.
T Consensus 318 G~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 318 GFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp TCCCCSSHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHhc
Confidence 6 44689999999999875
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=279.65 Aligned_cols=303 Identities=21% Similarity=0.188 Sum_probs=219.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-cccc-----------CCCcCCCCeEEEEccCCCHHHHH
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNL-----------IPSKASSNFKFVKGDIASADLVN 73 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~-----------~~~~~~~~~~~~~~Dl~d~~~~~ 73 (668)
+|+|||||||||||++|++.|+++ +++|++++|...... ...+ .......+++++.+|+.|++.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 579999999999999999999777 789999988653110 0000 00112358999999999977776
Q ss_pred HHhccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCC--cCCCCCCCC
Q 005949 74 FLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDED--AVVGNHEAS 151 (668)
Q Consensus 74 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~~~~e~~ 151 (668)
+. .++|+|||+||.... ..++..++++|+.++.+++++|++ + +++|||+||.++ |..... .....+|++
T Consensus 228 -~~--~~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~ 298 (508)
T 4f6l_B 228 -LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTFSEAD 298 (508)
T ss_dssp -CS--SCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT-TSEECTTCSCCEECTTC
T ss_pred -Cc--cCCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh-ccCCccCCcCccccccc
Confidence 33 789999999998642 345667889999999999999998 4 699999999999 432111 111224444
Q ss_pred C---CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCCceeecCCCc
Q 005949 152 Q---LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 152 ~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+ ..|.+.|+.+|..+|.+++.+++ .|++++++||++|||++.... ..+..+++....++.++. +++.+
T Consensus 299 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~ 376 (508)
T 4f6l_B 299 VYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEM 376 (508)
T ss_dssp SCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGS
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCc
Confidence 3 44788999999999999998764 599999999999999976432 346777777777665554 44678
Q ss_pred eEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec---cC-----------CCCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV---EN-----------RPFND 287 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~-----------~~~~~ 287 (668)
.++|+|++|+|++++.++..+..+++||+++++++++.|+++.+.+.. .+......|. .. .....
T Consensus 377 ~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~ 455 (508)
T 4f6l_B 377 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQ 455 (508)
T ss_dssp EEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGS
T ss_pred eEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccC
Confidence 999999999999999999887788999999999999999999998653 1110000000 00 00011
Q ss_pred cccccChHHH----HhCCCcccCCHHHHHHHHHHHHhhC
Q 005949 288 QRYFLDDQKL----TSLGWSERTIWEEGLRKTIEWYTQN 322 (668)
Q Consensus 288 ~~~~~~~~k~----~~lG~~~~~~~~~~l~~~~~~~~~~ 322 (668)
....+|+++. +++||.+...-++.++.+++|+++.
T Consensus 456 ~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 456 QLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp EECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred cceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 2345565554 4689998876788899999988874
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=257.40 Aligned_cols=253 Identities=18% Similarity=0.191 Sum_probs=195.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc----------cccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY----------GKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESH 453 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~----------~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~ 453 (668)
|+|+||||+||||+++++.|++ |++|.. +.+|++|++++.+++++.++|+|||+||.. ....+..+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~---~~~~~~~~ 76 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMT---DVDKCEIE 76 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEECCccc---ChhhhhhC
Confidence 5899999999999999999995 888754 457999999999999986779999999976 34444567
Q ss_pred cccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCee
Q 005949 454 KTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVC 533 (668)
Q Consensus 454 ~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 533 (668)
+...+++|+.++.+++++|++.++++|++||..+|++... + ..|+.+..|.+.|+.+|..+|++++.
T Consensus 77 ~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~-------~~e~~~~~~~~~Y~~sK~~~e~~~~~----- 143 (273)
T 2ggs_A 77 KEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-N-------YKEEDIPNPINYYGLSKLLGETFALQ----- 143 (273)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-S-------BCTTSCCCCSSHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-C-------cCCCCCCCCCCHHHHHHHHHHHHHhC-----
Confidence 8889999999999999999998889999999999975432 3 34445556678999999999999976
Q ss_pred EeEEeeeecCCCCChhhHHHHh----hcccceeec--CCCcccHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHH
Q 005949 534 TLRVRMPISSDLNNPRNFITKI----SRYNKVVNI--PNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMY 607 (668)
Q Consensus 534 ~l~~~~~r~~~~~g~~~~~~~~----~~~~~~~~~--~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i 607 (668)
++.+++|++.+||+..+...+ ..+...... ..+++|++|+|++++.+++++..|+||+++ +.+|+.|+++.+
T Consensus 144 -~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~~g~~~i~~-~~~s~~e~~~~~ 221 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRKTGIIHVAG-ERISRFELALKI 221 (273)
T ss_dssp -TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTCCEEEECCC-CCEEHHHHHHHH
T ss_pred -CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCcCCeEEECC-CcccHHHHHHHH
Confidence 567889999999865544433 333332222 347999999999999999887788999999 999999999999
Q ss_pred HhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-Cc--cChHHHH
Q 005949 608 KKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-EL--LSIKDSL 657 (668)
Q Consensus 608 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~--~~~~~~l 657 (668)
.+.+|.+.++....... ...........+|++|+++.+| .+ .+++++|
T Consensus 222 ~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 222 KEKFNLPGEVKEVDEVR--GWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp HHHTTCCSCEEEESSCT--TCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred HHHhCCChhhccccccc--ccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 99999876543111000 0011112346889999999888 32 4666553
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-30 Score=251.36 Aligned_cols=236 Identities=19% Similarity=0.236 Sum_probs=190.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
||+|||||||||||+++++.|+++ +++|++++|..... + ..+++++.+|+.|.+.+.+++ .++|+||
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~----~-----~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi 68 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGA----A-----EAHEEIVACDLADAQAVHDLV--KDCDGII 68 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCC----C-----CTTEEECCCCTTCHHHHHHHH--TTCSEEE
T ss_pred CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCccc----c-----CCCccEEEccCCCHHHHHHHH--cCCCEEE
Confidence 468999999999999999999998 68999999864211 1 136789999999999999998 6799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+|+... ..+....+++|+.++.++++++++.+ +++||++||..+|+..... .+.+|+.+..|.+.|+.+|..
T Consensus 69 ~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~--~~~~E~~~~~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 69 HLGGVSV----ERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRT--TRIDTEVPRRPDSLYGLSKCF 141 (267)
T ss_dssp ECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTT--SCBCTTSCCCCCSHHHHHHHH
T ss_pred ECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCC--CCCCCCCCCCCCChHHHHHHH
Confidence 9999752 35567889999999999999999876 8999999999999875432 223677788888999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC-
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV- 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~- 244 (668)
+|.+++.++.+++++++++||+++|+... ++...++|+|++|+|++++.+++.+..
T Consensus 142 ~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~ 198 (267)
T 3ay3_A 142 GEDLASLYYHKFDIETLNIRIGSCFPKPK-----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG 198 (267)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECBCSSSCC-----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHcCCCEEEEeceeecCCCC-----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence 99999998877899999999999994211 112356789999999999999987754
Q ss_pred CceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHHHHHH
Q 005949 245 GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIE 317 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~ 317 (668)
.++|++.++.. ..+.|..+++.|||+|+++++++++++.+
T Consensus 199 ~~~~~~~~~~~---------------------------------~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 199 CTVVYGASANT---------------------------------ESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp EEEEEECCSCS---------------------------------SCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred ceeEecCCCcc---------------------------------ccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 45777754320 12345556666999999999999988754
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=288.87 Aligned_cols=271 Identities=16% Similarity=0.134 Sum_probs=205.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
+|+||||||+||||++|+++|+++|++|. ++.+|++|++++.++++..++|+|||
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih 90 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 90 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence 46899999999999999999999998653 24578999999999998667799999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
+||.. .......++...+++|+.++.+|+++|++.++ ++|++||..+|+.....+ ...+ ..|+.+..|.+.|+
T Consensus 91 ~A~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~--~~~~-~~E~~~~~p~~~Y~ 164 (699)
T 1z45_A 91 FAGLK---AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFP--NMIP-IPEECPLGPTNPYG 164 (699)
T ss_dssp CCSCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGST--TCCS-BCTTSCCCCCSHHH
T ss_pred CCccc---CcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCcccc--ccCC-ccccCCCCCCChHH
Confidence 99976 33334456677899999999999999999887 788899999997543211 0011 34555666778999
Q ss_pred hhHHHHHHHHHhccCe--eEeEEeeeecCCCCChh--------------hHHHH---hhcc--cceeec-----------
Q 005949 517 KTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPR--------------NFITK---ISRY--NKVVNI----------- 564 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~--------------~~~~~---~~~~--~~~~~~----------- 564 (668)
.+|.++|++++.+... .+++++++|++++|||. .++.. +..+ .+....
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 9999999999887543 58999999999988863 23332 2222 222221
Q ss_pred CCCcccHhhHHHHHHHHHhcc--------CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCC
Q 005949 565 PNSMTVLDELLPISIEMAKRN--------LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNN 636 (668)
Q Consensus 565 ~~~~~~v~D~a~~~~~~~~~~--------~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 636 (668)
..+|+|++|+|++++.++++. .+++||+++++.+|+.|+++.+++.+|.+.++...+. ...+....
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~------~~~~~~~~ 318 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR------RAGDVLNL 318 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------CCCC
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCC------CCCccccc
Confidence 128999999999999998641 3469999999999999999999999998765432221 11223456
Q ss_pred ccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 637 EMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 637 ~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
.+|++|+++.+| +..+++++|+++++|+.
T Consensus 319 ~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~ 349 (699)
T 1z45_A 319 TAKPDRAKRELKWQTELQVEDSCKDLWKWTT 349 (699)
T ss_dssp CBCCHHHHHHTCCCCCCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 889999999888 44799999999999874
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-30 Score=287.39 Aligned_cols=274 Identities=14% Similarity=0.133 Sum_probs=206.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHc-CCcc-------------------cccccccCChhH-HHHHhhhcCCCEEEEccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKE-GIPF-------------------EYGKGRLEDCSS-LIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~-g~~v-------------------~~~~~D~~d~~~-~~~~l~~~~~d~Vih~a~ 440 (668)
.||+|+||||+||||++++++|+++ |++| .++.+|++|.++ +.++++++ |+|||+||
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~--D~Vih~Aa 391 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKC--DVVLPLVA 391 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHC--SEEEECCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCC--CEEEECce
Confidence 4579999999999999999999998 7754 345678888765 67777765 99999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCC-----C-CCCCCc
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDT-----P-NFTGSF 514 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~-----~-~~~~~~ 514 (668)
.. .......++...+++|+.++.+++++|++.+.++|++||..+|+.....+ +.|++. | ..|.+.
T Consensus 392 ~~---~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~------~~E~~~~~~~~p~~~p~~~ 462 (660)
T 1z7e_A 392 IA---TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKY------FDEDHSNLIVGPVNKPRWI 462 (660)
T ss_dssp CC---CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSS------BCTTTCCEEECCTTCTTHH
T ss_pred ec---CccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcc------cCCCccccccCcccCCCCC
Confidence 77 34334567788899999999999999999887888999999998654433 333332 1 145578
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh----------------HHHHhhcccceeecC-----CCcccHhh
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN----------------FITKISRYNKVVNIP-----NSMTVLDE 573 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~----------------~~~~~~~~~~~~~~~-----~~~~~v~D 573 (668)
|+.||.++|++++.+.+..+++++++|++++|||.. ++.++..+......+ .+|+|++|
T Consensus 463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D 542 (660)
T 1z7e_A 463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 542 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHH
Confidence 999999999999988766799999999999999852 334455554433222 27999999
Q ss_pred HHHHHHHHHhcc----CCceeeecCCC-ccCHHHHHHHHHhhcCCCCCCCCCCHHH---------hhhhhccCCCCCccC
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPG-VVSHNEILEMYKKYINPEFKWVNFTLEE---------QAKVIVAPRSNNEMD 639 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~ld 639 (668)
+|++++.+++++ .+++||+++++ .+|+.|+++.+.+.+|.+.....++... .............+|
T Consensus 543 va~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (660)
T 1z7e_A 543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622 (660)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBC
T ss_pred HHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccC
Confidence 999999999864 35799999986 8999999999999988653322222100 000001122346789
Q ss_pred hhHHHhhcC--CccChHHHHHHHHhccCC
Q 005949 640 ASKLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 640 ~~k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
++|+++.+| +..+++++|+++++++.+
T Consensus 623 ~~ka~~~LG~~p~~~l~egl~~~i~~~~~ 651 (660)
T 1z7e_A 623 IRNAHRCLDWEPKIDMQETIDETLDFFLR 651 (660)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCccCcHHHHHHHHHHHHHh
Confidence 999999877 336999999999998854
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-29 Score=252.62 Aligned_cols=260 Identities=13% Similarity=0.159 Sum_probs=197.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|+++.++++|++++|... ....+ ...+++++.+|+.|.+.+.+++ .++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~--~~~~l----~~~~~~~~~~D~~d~~~l~~~~--~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE--KASTL----ADQGVEVRHGDYNQPESLQKAF--AGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTT--TTHHH----HHTTCEEEECCTTCHHHHHHHT--TTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHH--HHhHH----hhcCCeEEEeccCCHHHHHHHH--hcCCEEEE
Confidence 4799999999999999999998733578888888542 11111 1246889999999999999998 67999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+... . . +.|+.++.+++++|++.+ +++||++||..+|.. ..+|+.+|..+
T Consensus 73 ~a~~~~-----~---~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~-----------------~~~y~~~K~~~ 124 (287)
T 2jl1_A 73 ISGPHY-----D---N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEES-----------------IIPLAHVHLAT 124 (287)
T ss_dssp CCCCCS-----C---H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGGC-----------------CSTHHHHHHHH
T ss_pred cCCCCc-----C---c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCCC-----------------CCchHHHHHHH
Confidence 998621 1 1 579999999999999977 899999999888621 13699999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-CC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-VG 245 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~ 245 (668)
|.+++. .+++++++||+.++|+... .++. .....+. .. ...+.+.++|+|++|+|++++.+++++. .+
T Consensus 125 E~~~~~----~~~~~~ilrp~~~~~~~~~--~~~~---~~~~~~~-~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g 193 (287)
T 2jl1_A 125 EYAIRT----TNIPYTFLRNALYTDFFVN--EGLR---ASTESGA-IV-TNAGSGIVNSVTRNELALAAATVLTEEGHEN 193 (287)
T ss_dssp HHHHHH----TTCCEEEEEECCBHHHHSS--GGGH---HHHHHTE-EE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTT
T ss_pred HHHHHH----cCCCeEEEECCEeccccch--hhHH---HHhhCCc-ee-ccCCCCccCccCHHHHHHHHHHHhcCCCCCC
Confidence 999863 4899999999998886421 2222 2222332 22 3556778899999999999999998754 57
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccC-----------CCCC-------------CcccccChHHHHh-C
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVEN-----------RPFN-------------DQRYFLDDQKLTS-L 300 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----------~~~~-------------~~~~~~~~~k~~~-l 300 (668)
++||+++++.+|+.|+++.+.+.+|.+... ...+. .+.. ......|++|+++ |
T Consensus 194 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (287)
T 2jl1_A 194 KTYNLVSNQPWTFDELAQILSEVSGKKVVH--QPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLI 271 (287)
T ss_dssp EEEEECCSSCBCHHHHHHHHHHHHSSCCEE--EECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred cEEEecCCCcCCHHHHHHHHHHHHCCcceE--EeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHh
Confidence 799999999999999999999999986432 11111 0100 0124567889875 9
Q ss_pred CCcccCCHHHHHHHHHH
Q 005949 301 GWSERTIWEEGLRKTIE 317 (668)
Q Consensus 301 G~~~~~~~~~~l~~~~~ 317 (668)
| |.++++|+|+++++
T Consensus 272 G--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 272 G--SLTPLKETVKQALK 286 (287)
T ss_dssp S--SCCCHHHHHHHHHT
T ss_pred C--CCCCHHHHHHHHhc
Confidence 9 77899999998875
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=260.95 Aligned_cols=213 Identities=20% Similarity=0.266 Sum_probs=187.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
|+|||||||||||++|+++|+++ ++ +|+.+++. .|.+.+.+++ .++|+||
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~-------------------------~d~~~l~~~~--~~~d~Vi 51 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ-------------------------TKEEELESAL--LKADFIV 51 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT-------------------------CCHHHHHHHH--HHCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC-------------------------CCHHHHHHHh--ccCCEEE
Confidence 58999999999999999999999 44 66665551 6788999988 4799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCc-EEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
|+||.... .++...++.|+.++.+++++|++.+ ++ +||++||..+|+ .++|+.+|.
T Consensus 52 h~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~------------------~~~Y~~sK~ 108 (369)
T 3st7_A 52 HLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ------------------DNPYGESKL 108 (369)
T ss_dssp ECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS------------------CSHHHHHHH
T ss_pred ECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC------------------CCCchHHHH
Confidence 99997653 3556778899999999999999987 55 999999999987 357999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
.+|.+++.++++.+++++++||+++|||+..+ .++++.++..+..+.++.+ .++.+.++++|++|+|++++.+++.+
T Consensus 109 ~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~ 187 (369)
T 3st7_A 109 QGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGT 187 (369)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence 99999999988889999999999999998755 3688899999988888776 57889999999999999999999988
Q ss_pred CC--CceEEEcCCCcccHHHHHHHHHHHhCCC
Q 005949 243 EV--GHVYNVGTKKERRVIDVAKDICKLFSMD 272 (668)
Q Consensus 243 ~~--~~~~ni~~~~~~s~~el~~~i~~~~g~~ 272 (668)
.. +++||+++++.+|+.|+++.+.+.+|.+
T Consensus 188 ~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 188 PTIENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp CCEETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred cccCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 76 7999999999999999999999998865
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=244.84 Aligned_cols=208 Identities=20% Similarity=0.215 Sum_probs=175.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|+||+||||||+|+||+++++.|+++ +++|++++|..... ...+++++.+|++|.+.+.+++ .++|+
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 67 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDP---------AGPNEECVQCDLADANAVNAMV--AGCDG 67 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCC---------CCTTEEEEECCTTCHHHHHHHH--TTCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCccc---------cCCCCEEEEcCCCCHHHHHHHH--cCCCE
Confidence 34679999999999999999999999 68899999864211 1457899999999999999999 68999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+||.. ...++...+++|+.|+.++++++++.+ +++||++||..+|+...... ..+|+.+..|.+.|+.+|
T Consensus 68 vi~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~--~~~e~~~~~~~~~Y~~sK 140 (267)
T 3rft_A 68 IVHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTE--RLGPDVPARPDGLYGVSK 140 (267)
T ss_dssp EEECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTS--CBCTTSCCCCCSHHHHHH
T ss_pred EEECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCC--CCCCCCCCCCCChHHHHH
Confidence 99999984 346678899999999999999999876 89999999999998654332 236777888889999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..+|.+++.++++++++++++||+.|+|+. .++...++|++++|+++++..+++.+.
T Consensus 141 ~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~-----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~ 197 (267)
T 3rft_A 141 CFGENLARMYFDKFGQETALVRIGSCTPEP-----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPV 197 (267)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECBCSSSC-----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHhCCeEEEEEeecccCCC-----------------------CCCCceeeEEcHHHHHHHHHHHHhCCC
Confidence 999999999998889999999999999873 223455678999999999999998876
Q ss_pred C-CceEEEcCCC
Q 005949 244 V-GHVYNVGTKK 254 (668)
Q Consensus 244 ~-~~~~ni~~~~ 254 (668)
. ..++++.+++
T Consensus 198 ~~~~~~~~~s~~ 209 (267)
T 3rft_A 198 LGCPVVWGASAN 209 (267)
T ss_dssp CCSCEEEECCCC
T ss_pred CCceEEEEeCCC
Confidence 5 4578877655
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-30 Score=261.89 Aligned_cols=265 Identities=16% Similarity=0.142 Sum_probs=182.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEE
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
|+|+||||||+||||++|++.|+++||+|. ++.+|++|++++.++++++ |+||
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~Vi 85 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGC--DFVF 85 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTC--SEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCC--CEEE
Confidence 457999999999999999999999998652 2346888888888888876 9999
Q ss_pred EcccccCCCCccccccccc-cceehhhhhhHHHHHHHHHcC-C-cEEEEeccee-EeecCCCCCCCCCCCCCCCCC----
Q 005949 437 NAAGVTGRPNVDWCESHKT-DTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCI-FEYDAAHPEGSGIGYKEEDTP---- 508 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~v-y~~~~~~p~~~~~~~~ee~~~---- 508 (668)
|+|+.. .. ...++. +++++|+.|+.+++++|++.+ + ++|++||..+ |+.....+ ..+ .+|+.+
T Consensus 86 h~A~~~---~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~---~~~-~~E~~~~~~~ 156 (338)
T 2rh8_A 86 HVATPV---HF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGT---GLV-VDEKNWTDIE 156 (338)
T ss_dssp EESSCC---CC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCS---CCC-CCTTTTTCC-
T ss_pred EeCCcc---CC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCC---Ccc-cChhhccchh
Confidence 999855 21 223443 488999999999999999985 6 6777777663 43321110 011 233321
Q ss_pred ----CC-CCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------HHHHh---hccccee----------ec
Q 005949 509 ----NF-TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITKI---SRYNKVV----------NI 564 (668)
Q Consensus 509 ----~~-~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~~---~~~~~~~----------~~ 564 (668)
.. +...|+.||.++|++++.+.+.++++++++||+++|||.. .+..+ +.+.... ..
T Consensus 157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (338)
T 2rh8_A 157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236 (338)
T ss_dssp ------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccC
Confidence 11 1226999999999999988665789999999999999962 12211 2222110 00
Q ss_pred CCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccChhH
Q 005949 565 PNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDASK 642 (668)
Q Consensus 565 ~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k 642 (668)
..+|+|++|+|++++.+++++ ..|.||+++ +.+|+.|+++.+.+.++. +++.. .. ... ......+|++|
T Consensus 237 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~---~~----~~~-~~~~~~~d~~k 307 (338)
T 2rh8_A 237 SVSIAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTD---FG----DFP-PKSKLIISSEK 307 (338)
T ss_dssp SEEEEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCC---CT----TSC-SSCSCCCCCHH
T ss_pred cccEEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCC---CC----CCC-cCcceeechHH
Confidence 117999999999999999865 567898876 568999999999988752 22110 00 001 11236789999
Q ss_pred HHhhcC-CccChHHHHHHHHhccCC
Q 005949 643 LKKEFP-ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 643 ~~~~~g-~~~~~~~~l~~~~~~~~~ 666 (668)
++++++ +..+++++|+++++|+.+
T Consensus 308 ~~~lG~~p~~~l~~gl~~~~~~~~~ 332 (338)
T 2rh8_A 308 LVKEGFSFKYGIEEIYDESVEYFKA 332 (338)
T ss_dssp HHHHTCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 966544 345999999999998753
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-30 Score=262.52 Aligned_cols=265 Identities=10% Similarity=0.096 Sum_probs=195.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------cc-ccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YG-KGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~-~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
+|+||||||+||||+++++.|+++|++|. ++ .+|++|.+++.+++++ +|+||
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi 88 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG--AAGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT--CSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcC--CCEEE
Confidence 47899999999999999999999998652 23 6799998888888775 59999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHH-cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC-------
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRD-HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT------- 507 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~-~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~------- 507 (668)
|+||.. .. ..++...+++|+.++.+++++|.+ .++ ++|++||..+|+...... .+.++.|++.
T Consensus 89 h~A~~~---~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~--~~~~~~E~~~~~~~~~~ 160 (342)
T 1y1p_A 89 HIASVV---SF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV--EGIYLDEKSWNLESIDK 160 (342)
T ss_dssp ECCCCC---SC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC--CCCEECTTCCCHHHHHH
T ss_pred EeCCCC---CC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCC--CCcccCccccCchhhhh
Confidence 999976 22 246677899999999999999985 565 788888888886432110 0122344331
Q ss_pred --------CCCCCCcchhhHHHHHHHHHhccCee--EeEEeeeecCCCCChhh-----------HHHHhhcccceee---
Q 005949 508 --------PNFTGSFYSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN-----------FITKISRYNKVVN--- 563 (668)
Q Consensus 508 --------~~~~~~~Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~-----------~~~~~~~~~~~~~--- 563 (668)
+..|.+.|+.||..+|++++.+.+.+ +++++++|++++|||.. ++..+..+.....
T Consensus 161 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1y1p_A 161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL 240 (342)
T ss_dssp HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred hccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccccc
Confidence 23455789999999999999875433 68999999999999851 3444444443211
Q ss_pred -cCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChh
Q 005949 564 -IPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDAS 641 (668)
Q Consensus 564 -~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~ 641 (668)
...+|+|++|+|++++.+++++ ..|.+++++++.+|+.|+++.+++.+|.. .+. .... ........+|++
T Consensus 241 ~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~-~~~-~~~~------~~~~~~~~~d~~ 312 (342)
T 1y1p_A 241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK-TFP-ADFP------DQGQDLSKFDTA 312 (342)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS-CCC-CCCC------CCCCCCCEECCH
T ss_pred CCcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc-cCC-CCCC------ccccccccCChH
Confidence 2347999999999999999865 45555567778899999999999999875 211 1100 111123578999
Q ss_pred HHHhhcC-----CccChHHHHHHHHhccC
Q 005949 642 KLKKEFP-----ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 642 k~~~~~g-----~~~~~~~~l~~~~~~~~ 665 (668)
|+++.+| ..++++++|++++++++
T Consensus 313 k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 313 PSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp HHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred HHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 9998764 45789999999999885
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-29 Score=247.45 Aligned_cols=259 Identities=15% Similarity=0.161 Sum_probs=191.2
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
+|||||||||||+++++.|+++.++++|++++|.... ...+ ...+++++.+|+.|.+.+.+++ .++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~--~~~~----~~~~~~~~~~D~~d~~~~~~~~--~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK--AQAL----AAQGITVRQADYGDEAALTSAL--QGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT--CHHH----HHTTCEEEECCTTCHHHHHHHT--TTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh--hhhh----hcCCCeEEEcCCCCHHHHHHHH--hCCCEEEEe
Confidence 5999999999999999999987335788888885421 1111 1236889999999999999998 679999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHH
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAE 167 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 167 (668)
|+... ..|+.++.+++++|++.+ +++||++||..+|.. ..+|+.+|..+|
T Consensus 73 a~~~~------------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~-----------------~~~y~~sK~~~e 122 (286)
T 2zcu_A 73 SSSEV------------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADTS-----------------PLGLADEHIETE 122 (286)
T ss_dssp C--------------------CHHHHHHHHHHHHT-CCEEEEEEETTTTTC-----------------CSTTHHHHHHHH
T ss_pred CCCCc------------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCCC-----------------cchhHHHHHHHH
Confidence 98521 147889999999999987 899999999988721 136999999999
Q ss_pred HHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-CCc
Q 005949 168 MLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-VGH 246 (668)
Q Consensus 168 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~~ 246 (668)
.+++. .+++++++||+.++++.. ..+ .. ...++.+. .+++.+.++|+|++|+|++++.+++.+. .++
T Consensus 123 ~~~~~----~~~~~~ilrp~~~~~~~~---~~~---~~-~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~ 190 (286)
T 2zcu_A 123 KMLAD----SGIVYTLLRNGWYSENYL---ASA---PA-ALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGK 190 (286)
T ss_dssp HHHHH----HCSEEEEEEECCBHHHHH---TTH---HH-HHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTC
T ss_pred HHHHH----cCCCeEEEeChHHhhhhH---HHh---HH-hhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCc
Confidence 99864 489999999987766432 122 22 22223333 4567788999999999999999998753 578
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-----------CCC-------------CcccccChHHHHh-CC
Q 005949 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-----------PFN-------------DQRYFLDDQKLTS-LG 301 (668)
Q Consensus 247 ~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----------~~~-------------~~~~~~~~~k~~~-lG 301 (668)
+||+++++.+|+.|+++.+.+.+|.+... ...+.. +.. ......|++++++ ||
T Consensus 191 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 268 (286)
T 2zcu_A 191 VYELAGDSAWTLTQLAAELTKQSGKQVTY--QNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIG 268 (286)
T ss_dssp EEEECCSSCBCHHHHHHHHHHHHSSCCEE--EECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHT
T ss_pred eEEEeCCCcCCHHHHHHHHHHHHCCCCce--eeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhC
Confidence 99999988999999999999999986432 111110 100 0124567888875 99
Q ss_pred CcccCCHHHHHHHHHHHH
Q 005949 302 WSERTIWEEGLRKTIEWY 319 (668)
Q Consensus 302 ~~~~~~~~~~l~~~~~~~ 319 (668)
| |.++++|+|+++++||
T Consensus 269 ~-~~~~~~e~l~~~~~~~ 285 (286)
T 2zcu_A 269 H-PTTTLAESVSHLFNVN 285 (286)
T ss_dssp S-CCCCHHHHHHGGGC--
T ss_pred c-CCCCHHHHHHHHHhhc
Confidence 7 5569999999998886
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=258.54 Aligned_cols=263 Identities=16% Similarity=0.148 Sum_probs=185.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
+++||||||+||||++|+++|+++|++|. ++.+|++|++++.++++++ |+||
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGC--TGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTC--SEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCC--CEEE
Confidence 46899999999999999999999998652 2346888888888888876 9999
Q ss_pred EcccccCCCCccccccccc-cceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeec-CCCCCCCCCCCCCCCCCC---
Q 005949 437 NAAGVTGRPNVDWCESHKT-DTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYD-AAHPEGSGIGYKEEDTPN--- 509 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~-~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~-~~~p~~~~~~~~ee~~~~--- 509 (668)
|+|+.. .....++. ..+++|+.||.+|+++|++.+ + ++|++||+.++++. ...+ ..+|+.+.
T Consensus 83 h~A~~~-----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~------~~~E~~~~~~~ 151 (337)
T 2c29_D 83 HVATPM-----DFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP------VYDESCWSDME 151 (337)
T ss_dssp ECCCCC-----CSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCS------EECTTCCCCHH
T ss_pred Eecccc-----CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCc------ccCcccCCchh
Confidence 999854 11223333 578899999999999999987 6 67777877644332 2111 23343321
Q ss_pred ------CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------HHHHh---hccccee-e--cCCCcccH
Q 005949 510 ------FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITKI---SRYNKVV-N--IPNSMTVL 571 (668)
Q Consensus 510 ------~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~~---~~~~~~~-~--~~~~~~~v 571 (668)
++.+.|+.||.++|++++.+.+.++++++++||+++|||.. .+... +.+.... . ....|+|+
T Consensus 152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v 231 (337)
T 2c29_D 152 FCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHL 231 (337)
T ss_dssp HHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEH
T ss_pred hhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEH
Confidence 24457999999999999888665789999999999999962 12111 1221110 0 01149999
Q ss_pred hhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-
Q 005949 572 DELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP- 648 (668)
Q Consensus 572 ~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g- 648 (668)
+|+|++++.+++++ ..|.|++++ +.+|+.|+++.+++.++. .++. ... ..........+|++|++.+++
T Consensus 232 ~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~---~~~----~~~~~~~~~~~d~~k~~~lG~~ 303 (337)
T 2c29_D 232 DDLCNAHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIPT---EFK----GVDENLKSVCFSSKKLTDLGFE 303 (337)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCCS---CCT----TCCTTCCCCEECCHHHHHHTCC
T ss_pred HHHHHHHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCCC---CCC----cccCCCccccccHHHHHHcCCC
Confidence 99999999999865 567887655 568999999999998732 2211 000 001122345789999955444
Q ss_pred CccChHHHHHHHHhccCC
Q 005949 649 ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 649 ~~~~~~~~l~~~~~~~~~ 666 (668)
+..+++++|+++++++.+
T Consensus 304 p~~~l~e~l~~~~~~~~~ 321 (337)
T 2c29_D 304 FKYSLEDMFTGAVDTCRA 321 (337)
T ss_dssp CCCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHH
Confidence 446899999999988753
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=254.91 Aligned_cols=267 Identities=15% Similarity=0.096 Sum_probs=196.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-----Ccc-----------------cccccccCChhHHHHHhhhcC-CCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG-----IPF-----------------EYGKGRLEDCSSLIADVQSVK-PTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g-----~~v-----------------~~~~~D~~d~~~~~~~l~~~~-~d~Vih~a~ 440 (668)
|+|+|||||||||++++++|+++| ++| .++.+|++|.+++.+++++++ +|+|||+||
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 799999999999999999999999 754 345679999999999999865 799999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHc--CCcEE--------EEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--GILMM--------NYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--~~~~v--------~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
.. ..++...+++|+.++.+++++|++. +++.+ |+||..+|+..... ..++.|++...+
T Consensus 82 ~~--------~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~----~~~~~E~~~~~~ 149 (364)
T 2v6g_A 82 AN--------RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESH----DPPYTEDLPRLK 149 (364)
T ss_dssp CC--------CSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCC----CSSBCTTSCCCS
T ss_pred CC--------cchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccC----CCCCCccccCCc
Confidence 66 2356778899999999999999998 67554 57888898764211 112344433333
Q ss_pred CCCcchhhHHHHHHHHHhccCeeE-eEEeeeecCCCCChhh-----------HHHHhh--cccceeecC--------CCc
Q 005949 511 TGSFYSKTKAMVEELLKEYDNVCT-LRVRMPISSDLNNPRN-----------FITKIS--RYNKVVNIP--------NSM 568 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~~~-l~~~~~r~~~~~g~~~-----------~~~~~~--~~~~~~~~~--------~~~ 568 (668)
+.+.| +.+|++++.+.+..+ ++++++|++++|||.. ++..+. .+......+ .++
T Consensus 150 ~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 225 (364)
T 2v6g_A 150 YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDC 225 (364)
T ss_dssp SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCC
T ss_pred cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCC
Confidence 35677 458999988876566 9999999999999851 122231 233222122 266
Q ss_pred ccHhhHHHHHHHHHhcc--CCceeeecCCCccCHHHHHHHHHhhcCCCCCCC--CCCHH------------Hhhhhh---
Q 005949 569 TVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWV--NFTLE------------EQAKVI--- 629 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~--~~~~~------------~~~~~~--- 629 (668)
++++|+|++++.+++++ .+++||+++++.+|+.|+++.+++.+|.+.... .+|.. +.....
T Consensus 226 ~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 305 (364)
T 2v6g_A 226 SDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGL 305 (364)
T ss_dssp EEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCC
Confidence 78899999999999876 356999999999999999999999999876533 33321 000000
Q ss_pred ccC---C------------CC-CccChhHHHhhcC--CccChHHHHHHHHhccCCC
Q 005949 630 VAP---R------------SN-NEMDASKLKKEFP--ELLSIKDSLIKYVFEPNKK 667 (668)
Q Consensus 630 ~~~---~------------~~-~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~~~ 667 (668)
... + .. ..+|++|+++ +| +..+++++|+++++++.++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 306 TPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAY 360 (364)
T ss_dssp CCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHc
Confidence 000 0 23 4789999998 66 4589999999999988543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-29 Score=252.57 Aligned_cols=265 Identities=15% Similarity=0.190 Sum_probs=183.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc---------------------------ccccccCChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------------YGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------------~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
++||||||+||||+++++.|+++|++|. ++.+|++|++++.++++++ |+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC--VGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC--SEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC--CEEE
Confidence 5899999999999999999999998653 2336888888899899876 9999
Q ss_pred EcccccCCCCcccccccc-ccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC----
Q 005949 437 NAAGVTGRPNVDWCESHK-TDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN---- 509 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~-~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~---- 509 (668)
|+|+.. .....++ ..++++|+.|+.+++++|.+. ++ ++|++||..++++.... ..+ .+|+.+.
T Consensus 80 h~A~~~-----~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~----~~~-~~e~~~~~~~~ 149 (322)
T 2p4h_X 80 HTASPI-----DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD----KDV-LDESDWSDVDL 149 (322)
T ss_dssp ECCCCC-------------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC----CSE-ECTTCCCCHHH
T ss_pred EcCCcc-----cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC----Cee-cCCccccchhh
Confidence 999733 2233344 348899999999999999988 66 77888887654332211 011 2333221
Q ss_pred ----CCCC-cchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh------HHHHh---hcccce--eecCCCcccHhh
Q 005949 510 ----FTGS-FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN------FITKI---SRYNKV--VNIPNSMTVLDE 573 (668)
Q Consensus 510 ----~~~~-~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~------~~~~~---~~~~~~--~~~~~~~~~v~D 573 (668)
.|.+ .|+.||.++|++++.+.+.++++++++||+++|||.. ++..+ +.+... .....+++|++|
T Consensus 150 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~D 229 (322)
T 2p4h_X 150 LRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDD 229 (322)
T ss_dssp HHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHH
T ss_pred hcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHH
Confidence 2223 6999999999999988665789999999999999852 22222 222211 111116999999
Q ss_pred HHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcCCc-c
Q 005949 574 LLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPEL-L 651 (668)
Q Consensus 574 ~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g~~-~ 651 (668)
+|++++.+++++ ..|.|| ++++.+|+.|+++.+.+.++. .. ++....... ........+|++|++++++.+ .
T Consensus 230 va~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~-~~---~~~~~~~~~-~~~~~~~~~d~~k~~~lG~~p~~ 303 (322)
T 2p4h_X 230 VARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPE-YQ---ILTVDELKE-IKGARLPDLNTKKLVDAGFDFKY 303 (322)
T ss_dssp HHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTT-SC---CCCTTTTTT-CCCEECCEECCHHHHHTTCCCCC
T ss_pred HHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCC-CC---CCCCccccC-CCCCcceecccHHHHHhCCccCC
Confidence 999999999765 457899 667899999999999987642 11 111000000 011134678999996644444 5
Q ss_pred ChHHHHHHHHhccCC
Q 005949 652 SIKDSLIKYVFEPNK 666 (668)
Q Consensus 652 ~~~~~l~~~~~~~~~ 666 (668)
+++++|+++++++.+
T Consensus 304 ~~~~~l~~~~~~~~~ 318 (322)
T 2p4h_X 304 TIEDMFDDAIQCCKE 318 (322)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999998753
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-29 Score=268.95 Aligned_cols=265 Identities=12% Similarity=0.066 Sum_probs=183.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccccc----------ccccCChhHHHHHhhhcCCCEEEEcccccCCCCc-cccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYG----------KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNV-DWCE 451 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~----------~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~-~~~~ 451 (668)
||||||||||||||++|++.|+++|++|..+ .+|+.+. +.+.++ ++|+|||+|+.. .. .+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~--~~~~l~--~~D~Vih~A~~~---~~~~~~~ 219 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNP--ASDLLD--GADVLVHLAGEP---IFGRFND 219 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSC--CTTTTT--TCSEEEECCCC--------CCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccch--hHHhcC--CCCEEEECCCCc---cccccch
Confidence 5899999999999999999999999987544 3444432 234455 459999999976 22 3455
Q ss_pred cccccceehhhhhhHHHHHH-HHHcCC-cEEEEecceeEe-ecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHh
Q 005949 452 SHKTDTIRTNVAGTLTLADV-CRDHGI-LMMNYATGCIFE-YDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKE 528 (668)
Q Consensus 452 ~~~~~~~~~Nv~~~~~ll~~-~~~~~~-~~v~~sS~~vy~-~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~ 528 (668)
.++..++++|+.++.+|+++ |++.++ ++|++||..+|+ .....+ .+|+.+. +.+.|+.+|..+|+++..
T Consensus 220 ~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~-------~~E~~~~-~~~~y~~~~~~~E~~~~~ 291 (516)
T 3oh8_A 220 SHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEI-------LTEESES-GDDFLAEVCRDWEHATAP 291 (516)
T ss_dssp GGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEE-------ECTTSCC-CSSHHHHHHHHHHHTTHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCc-------cCCCCCC-CcChHHHHHHHHHHHHHH
Confidence 66778899999999999999 566676 788889999998 433333 3444444 568999999999987654
Q ss_pred ccCeeEeEEeeeecCCCCChh-hHHHHhh---cccceeecC-----CCcccHhhHHHHHHHHHhcc-CCceeeecCCCcc
Q 005949 529 YDNVCTLRVRMPISSDLNNPR-NFITKIS---RYNKVVNIP-----NSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVV 598 (668)
Q Consensus 529 ~~~~~~l~~~~~r~~~~~g~~-~~~~~~~---~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~ 598 (668)
+ ...+++++++|++++|||. .++..+. ..+.....+ .+++|++|+|++++.+++++ ..|+||+++++.+
T Consensus 292 ~-~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~ 370 (516)
T 3oh8_A 292 A-SDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPV 370 (516)
T ss_dssp H-HHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCE
T ss_pred H-HhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCC
Confidence 4 3368999999999999986 3333332 111111222 38999999999999999876 6789999999999
Q ss_pred CHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccC------CCCCccChhHHHhhcCC--ccChHHHHHHHHhcc
Q 005949 599 SHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAP------RSNNEMDASKLKKEFPE--LLSIKDSLIKYVFEP 664 (668)
Q Consensus 599 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~ld~~k~~~~~g~--~~~~~~~l~~~~~~~ 664 (668)
|+.|+++.+++.+|.+.. ..+|........... .....++++|++++++. .++|+++|++++.+.
T Consensus 371 s~~el~~~i~~~~g~~~~-~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 371 SNADMTKILATSMHRPAF-IQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp EHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHhCCCCC-CCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCcc
Confidence 999999999999998752 233322111000000 12446789999976553 356999999999865
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=231.51 Aligned_cols=207 Identities=17% Similarity=0.221 Sum_probs=167.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCC-HHHHHHHhccCCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS-ADLVNFLLITESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~d~Vi 85 (668)
|+||||||||+||+++++.|+++ +++|++++|.... ... ..+++++.+|+.| .+.+.+++ .++|+||
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~--~~~------~~~~~~~~~D~~d~~~~~~~~~--~~~d~vi 68 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQ--VPQ------YNNVKAVHFDVDWTPEEMAKQL--HGMDAII 68 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGG--SCC------CTTEEEEECCTTSCHHHHHTTT--TTCSEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccc--hhh------cCCceEEEecccCCHHHHHHHH--cCCCEEE
Confidence 48999999999999999999998 6899999986432 111 1579999999999 99999998 6899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+||.... ..+++|+.++.++++++++.+ +++||++||..+++.... .| .+..|.+.|+.+|..
T Consensus 69 ~~ag~~~~--------~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~------~e-~~~~~~~~Y~~sK~~ 132 (219)
T 3dqp_A 69 NVSGSGGK--------SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKW------IG-AGFDALKDYYIAKHF 132 (219)
T ss_dssp ECCCCTTS--------SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGC------CS-HHHHHTHHHHHHHHH
T ss_pred ECCcCCCC--------CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcc------cc-cccccccHHHHHHHH
Confidence 99997542 256789999999999999976 899999999877764321 22 344567789999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-C
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~ 244 (668)
+|.+++ +..+++++++||+.+||+.... .+.+ +...+++++++|+|++++.+++++. .
T Consensus 133 ~e~~~~---~~~~i~~~ilrp~~v~g~~~~~---------------~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~ 191 (219)
T 3dqp_A 133 ADLYLT---KETNLDYTIIQPGALTEEEATG---------------LIDI---NDEVSASNTIGDVADTIKELVMTDHSI 191 (219)
T ss_dssp HHHHHH---HSCCCEEEEEEECSEECSCCCS---------------EEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHH---hccCCcEEEEeCceEecCCCCC---------------cccc---CCCcCCcccHHHHHHHHHHHHhCcccc
Confidence 999986 4569999999999999986421 1111 2567899999999999999998765 4
Q ss_pred CceEEEcCCCcccHHHHHH
Q 005949 245 GHVYNVGTKKERRVIDVAK 263 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~el~~ 263 (668)
+++||++++. .++.|+.+
T Consensus 192 g~~~~i~~g~-~~~~e~~~ 209 (219)
T 3dqp_A 192 GKVISMHNGK-TAIKEALE 209 (219)
T ss_dssp TEEEEEEECS-EEHHHHHH
T ss_pred CcEEEeCCCC-ccHHHHHH
Confidence 7899998775 89998865
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=249.83 Aligned_cols=235 Identities=18% Similarity=0.184 Sum_probs=181.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
|++|+|||||||||||++|++.|+++ +++|++++|..... ....+ ......+++++.+|+.|.+.+.+++.+.++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 44679999999999999999999999 57888888864211 11100 011135789999999999999999965599
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
|+|||+|+.. |+.++.+++++|++.+.+++||+ | +||.. .+|..+..|.+.|+.
T Consensus 85 d~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~-------~~e~~~~~p~~~y~~ 138 (346)
T 3i6i_A 85 DIVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGHD-------VNRADPVEPGLNMYR 138 (346)
T ss_dssp CEEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC-------TTTCCCCTTHHHHHH
T ss_pred CEEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCCC-------CCccCcCCCcchHHH
Confidence 9999999862 77888999999999876899986 4 45532 245556677789999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
+|..+|++++. .+++++++||+.++|.... .+... ......++.+.+++++.+.++|+|++|+|++++.+++.
T Consensus 139 sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~--~~~~~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~ 211 (346)
T 3i6i_A 139 EKRRVRQLVEE----SGIPFTYICCNSIASWPYY--NNIHP-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDD 211 (346)
T ss_dssp HHHHHHHHHHH----TTCCBEEEECCEESSCCCS--CC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH----cCCCEEEEEecccccccCc--ccccc-ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhC
Confidence 99999998875 4899999999999997542 11111 11122556678889999999999999999999999987
Q ss_pred CC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005949 242 GE-VGHVYNVGT-KKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 242 ~~-~~~~~ni~~-~~~~s~~el~~~i~~~~g~~~~ 274 (668)
+. .+++|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 212 ~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 212 VRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLP 246 (346)
T ss_dssp GGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred ccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence 65 477899974 5889999999999999998754
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=228.96 Aligned_cols=216 Identities=15% Similarity=0.194 Sum_probs=170.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCCCHHHHHHHhccCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
.+++|+||||||||+||+++++.|+++ +++|++++|.... ...+ ...++ +++.+|++ +.+.+++ .++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~--~~~~----~~~~~~~~~~~Dl~--~~~~~~~--~~~ 85 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQ--GPEL----RERGASDIVVANLE--EDFSHAF--ASI 85 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGG--HHHH----HHTTCSEEEECCTT--SCCGGGG--TTC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHH--HHHH----HhCCCceEEEcccH--HHHHHHH--cCC
Confidence 456889999999999999999999999 6899999986421 1111 12367 99999999 6677777 689
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
|+|||+||... ..++...+++|+.++.++++++++.+ +++||++||.+.+... ..+ .+...|+.
T Consensus 86 D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~----------~~~-~~~~~Y~~ 149 (236)
T 3e8x_A 86 DAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPD----------QGP-MNMRHYLV 149 (236)
T ss_dssp SEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGG----------GSC-GGGHHHHH
T ss_pred CEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCC----------CCh-hhhhhHHH
Confidence 99999999754 35678899999999999999999887 8999999995543221 111 45678999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
+|..+|.+++ +.+++++++||+.++|+... ..+....++...+++++++|+|++++.++++
T Consensus 150 sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~---------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~ 210 (236)
T 3e8x_A 150 AKRLADDELK----RSSLDYTIVRPGPLSNEEST---------------GKVTVSPHFSEITRSITRHDVAKVIAELVDQ 210 (236)
T ss_dssp HHHHHHHHHH----HSSSEEEEEEECSEECSCCC---------------SEEEEESSCSCCCCCEEHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH----HCCCCEEEEeCCcccCCCCC---------------CeEEeccCCCcccCcEeHHHHHHHHHHHhcC
Confidence 9999999886 45899999999999998541 1223334555678999999999999999987
Q ss_pred C-CCCceEEEcCCCcccHHHHHHHHH
Q 005949 242 G-EVGHVYNVGTKKERRVIDVAKDIC 266 (668)
Q Consensus 242 ~-~~~~~~ni~~~~~~s~~el~~~i~ 266 (668)
+ ..+++||++++ ..++.|+++.++
T Consensus 211 ~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 211 QHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp GGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred ccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 7 46789999877 599999998765
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-28 Score=233.61 Aligned_cols=202 Identities=12% Similarity=0.080 Sum_probs=158.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------cccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
.||+|+||||+||||++++++|+++|++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~~~-- 78 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGA--DAVISAFNPG-- 78 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTC--SEEEECCCC---
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCC--CEEEEeCcCC--
Confidence 36899999999999999999999999865 34578999999999999975 9999999854
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
..+ ...+++|+.++.+++++|++.++ ++|++||..+|+.....+ . ++.+..|.+.|+.+|..+|
T Consensus 79 ------~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~-~~~~~~p~~~Y~~sK~~~e 143 (227)
T 3dhn_A 79 ------WNN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR-------L-MDSGEVPENILPGVKALGE 143 (227)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEE-------G-GGTTCSCGGGHHHHHHHHH
T ss_pred ------CCC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCc-------c-ccCCcchHHHHHHHHHHHH
Confidence 122 23788999999999999999998 788888888776654332 2 3445567799999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceee---cCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCcc
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVN---IPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVV 598 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~ 598 (668)
+++..+.+..+++++++|++++|||......+..+..... .+.+++|++|+|++++.+++++ .+++||++++++.
T Consensus 144 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~ 223 (227)
T 3dhn_A 144 FYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHH 223 (227)
T ss_dssp HHHHTGGGCCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCC
T ss_pred HHHHHHhhccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhc
Confidence 9998887668999999999999999743222222222111 1247999999999999999987 5789999999998
Q ss_pred CHHH
Q 005949 599 SHNE 602 (668)
Q Consensus 599 s~~e 602 (668)
++.+
T Consensus 224 ~~~~ 227 (227)
T 3dhn_A 224 HHHH 227 (227)
T ss_dssp C---
T ss_pred ccCC
Confidence 8753
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-27 Score=252.50 Aligned_cols=220 Identities=16% Similarity=0.128 Sum_probs=172.4
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHc---CCcc---------------------------------------cccccccC
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKE---GIPF---------------------------------------EYGKGRLE 418 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~---g~~v---------------------------------------~~~~~D~~ 418 (668)
..||+||||||+||||++|+++|+++ |++| .++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 44689999999999999999999999 7754 23467887
Q ss_pred ------ChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeec
Q 005949 419 ------DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYD 491 (668)
Q Consensus 419 ------d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~ 491 (668)
|.+.+.++++++ |+|||+||.. .. .++...+++|+.|+.+|+++|++.++ ++|++||..||+..
T Consensus 151 ~~~~gld~~~~~~~~~~~--D~Vih~Aa~~---~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~ 221 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETV--DLIVDSAAMV---NA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAI 221 (478)
T ss_dssp SGGGGCCHHHHHHHHHHC--CEEEECCSSC---SB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTS
T ss_pred CcccCCCHHHHHHHHcCC--CEEEECcccc---CC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCcc
Confidence 556788888865 9999999977 22 56678889999999999999999988 89999999998765
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-----------CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---------hH
Q 005949 492 AAHPEGSGIGYKEEDTPNFTG-----------SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------NF 551 (668)
Q Consensus 492 ~~~p~~~~~~~~ee~~~~~~~-----------~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------~~ 551 (668)
...+ +.| +.+..|. +.|+.||+++|++++.+.+..+++++++|++++||+. .+
T Consensus 222 ~~~~------~~E-~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~ 294 (478)
T 4dqv_A 222 EPSA------FTE-DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDW 294 (478)
T ss_dssp CTTT------CCS-SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBH
T ss_pred CCCC------cCC-cccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHH
Confidence 4443 333 3332222 4499999999999999876678999999999999973 24
Q ss_pred HHHhhc----cccee-------------ecCCCcccHhhHHHHHHHHHhc------cCCceeeecCCCc--cCHHHHHHH
Q 005949 552 ITKISR----YNKVV-------------NIPNSMTVLDELLPISIEMAKR------NLRGIWNFTNPGV--VSHNEILEM 606 (668)
Q Consensus 552 ~~~~~~----~~~~~-------------~~~~~~~~v~D~a~~~~~~~~~------~~~g~~ni~~~~~--~s~~e~~~~ 606 (668)
+.+++. .+... ....+++|++|+|++++.++.+ ..+++||+++++. +|+.|+++.
T Consensus 295 ~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~ 374 (478)
T 4dqv_A 295 VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDW 374 (478)
T ss_dssp HHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHH
T ss_pred HHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHH
Confidence 444332 22221 2234889999999999999875 2567999999988 999999999
Q ss_pred HHhhcCCCCCC
Q 005949 607 YKKYINPEFKW 617 (668)
Q Consensus 607 i~~~~g~~~~~ 617 (668)
+++. |.+...
T Consensus 375 l~~~-g~~~~~ 384 (478)
T 4dqv_A 375 LIEA-GYPIRR 384 (478)
T ss_dssp HHHT-TCSCEE
T ss_pred HHHc-CCCccc
Confidence 9996 776543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=227.42 Aligned_cols=234 Identities=18% Similarity=0.169 Sum_probs=175.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++|+||||||+|+||+++++.|++++.+++|++++|... ....+ ..+++++.+|+.|.+.+.+++ .++|+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~--~~~~~-----~~~~~~~~~D~~d~~~~~~~~--~~~d~ 72 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKI-----GGEADVFIGDITDADSINPAF--QGIDA 72 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH--HHHHT-----TCCTTEEECCTTSHHHHHHHH--TTCSE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC--chhhc-----CCCeeEEEecCCCHHHHHHHH--cCCCE
Confidence 4678999999999999999999999866789999998632 11111 346788999999999999999 67999
Q ss_pred EEEcCccCCcc-------------cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 84 IMHFAAQTHVD-------------NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 84 Vih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
|||+||..... ..+++....+++|+.++.++++++++.+ +++||++||..++.......
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~------- 144 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLN------- 144 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGG-------
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCCCccc-------
Confidence 99999975421 1112223568999999999999999877 88999999988753221100
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
......|+.+|..+|.+++. .+++++++||+.+||+.......+ .+....++.+ ...+++++|
T Consensus 145 --~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~~D 207 (253)
T 1xq6_A 145 --KLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELLQT---DTKTVPRAD 207 (253)
T ss_dssp --GGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEE--------EESTTGGGGS---SCCEEEHHH
T ss_pred --cccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhh--------ccCCcCCcCC---CCcEEcHHH
Confidence 00123588899999998853 589999999999999975321111 1111111221 246899999
Q ss_pred HHHHHHHHHhcCC-CCceEEEcCCC---cccHHHHHHHHHHHhCC
Q 005949 231 VAEAFECILHKGE-VGHVYNVGTKK---ERRVIDVAKDICKLFSM 271 (668)
Q Consensus 231 ~a~ai~~~~~~~~-~~~~~ni~~~~---~~s~~el~~~i~~~~g~ 271 (668)
+|++++.+++.+. .+++||+++++ ++|+.|+++.+.+.+|.
T Consensus 208 va~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 208 VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 9999999998764 47799999864 59999999999988875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-26 Score=231.10 Aligned_cols=239 Identities=13% Similarity=0.143 Sum_probs=183.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc--CCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKE--GIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~--g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
|+|+|||||||||+++++.|+++ |++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~~- 77 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGV--SKLLFISGPH- 77 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTC--SEEEECCCCC-
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcC--CEEEEcCCCC-
Confidence 47999999999999999999998 8865 34568999999999999875 9999999843
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
.. . ++|+.++.+++++|++.++ ++|++||..+|. .+ ..|+.+|..+
T Consensus 78 ---~~-------~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------------~~-~~y~~~K~~~ 124 (287)
T 2jl1_A 78 ---YD-------N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--------------------SI-IPLAHVHLAT 124 (287)
T ss_dssp ---SC-------H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--------------------CC-STHHHHHHHH
T ss_pred ---cC-------c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------------CC-CchHHHHHHH
Confidence 10 1 5799999999999999998 677888876641 11 3799999999
Q ss_pred HHHHHhccCeeEeEEeeeecCCCCChh--hHHHHhhccccee----ecCCCcccHhhHHHHHHHHHhcc--CCceeeecC
Q 005949 523 EELLKEYDNVCTLRVRMPISSDLNNPR--NFITKISRYNKVV----NIPNSMTVLDELLPISIEMAKRN--LRGIWNFTN 594 (668)
Q Consensus 523 E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~ 594 (668)
|++++. .+++++++|++.++++. .++..++..+... +...+++|++|+|++++.+++++ .+++||+++
T Consensus 125 E~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~ 200 (287)
T 2jl1_A 125 EYAIRT----TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS 200 (287)
T ss_dssp HHHHHH----TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECC
T ss_pred HHHHHH----cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecC
Confidence 999975 47899999998777654 3344444333222 12238999999999999999875 456999999
Q ss_pred CCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhh-----cc-------------CCCCCccChhHHHhhcCCccChHHH
Q 005949 595 PGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVI-----VA-------------PRSNNEMDASKLKKEFPELLSIKDS 656 (668)
Q Consensus 595 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~-------------~~~~~~ld~~k~~~~~g~~~~~~~~ 656 (668)
++.+|+.|+++.+.+.+|.+.++...+........ +. .......|++|+++.+|+..+++++
T Consensus 201 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~l~e~ 280 (287)
T 2jl1_A 201 NQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIGSLTPLKET 280 (287)
T ss_dssp SSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhCCCCCHHHH
Confidence 99999999999999999998776666643221100 00 0123466899999977766899999
Q ss_pred HHHHHh
Q 005949 657 LIKYVF 662 (668)
Q Consensus 657 l~~~~~ 662 (668)
|+++++
T Consensus 281 l~~~~~ 286 (287)
T 2jl1_A 281 VKQALK 286 (287)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999875
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.94 E-value=2e-26 Score=221.20 Aligned_cols=220 Identities=9% Similarity=-0.021 Sum_probs=160.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|+++ +++|++++|.... ...+ ...+++++.+|+.|.+. +++ .++|+|||
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~--~~~~----~~~~~~~~~~D~~d~~~--~~~--~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQK--AADR----LGATVATLVKEPLVLTE--ADL--DSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHH----TCTTSEEEECCGGGCCH--HHH--TTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccc--cccc----cCCCceEEecccccccH--hhc--ccCCEEEE
Confidence 47999999999999999999999 6899999986421 1111 23578999999999987 666 68999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||..... .....|+.++.++++++++.+ ++||++||.+++...........++.....|.+.|+.+|..+
T Consensus 69 ~ag~~~~~-------~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~ 139 (224)
T 3h2s_A 69 ALSVPWGS-------GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQY 139 (224)
T ss_dssp CCCCCTTS-------SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHH
T ss_pred CCccCCCc-------chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHH
Confidence 99985211 124679999999999999976 899999998665544332212223444445578899999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-CC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-VG 245 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~ 245 (668)
|. +..+.++.+++++++||+.+|||+.... +. .....+.. +...+++++++|+|++++.+++++. .+
T Consensus 140 e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g 207 (224)
T 3h2s_A 140 YE-YQFLQMNANVNWIGISPSEAFPSGPATS-YV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIR 207 (224)
T ss_dssp HH-HHHHTTCTTSCEEEEEECSBCCCCCCCC-EE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTT
T ss_pred HH-HHHHHhcCCCcEEEEcCccccCCCcccC-ce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccC
Confidence 94 4445556699999999999999954322 10 11112222 2345689999999999999999876 58
Q ss_pred ceEEEcCCCcccHH
Q 005949 246 HVYNVGTKKERRVI 259 (668)
Q Consensus 246 ~~~ni~~~~~~s~~ 259 (668)
++|++++.+..+..
T Consensus 208 ~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 208 DRIVVRDADLEHHH 221 (224)
T ss_dssp SEEEEEECC-----
T ss_pred CEEEEecCcchhcc
Confidence 89999987765544
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=220.62 Aligned_cols=218 Identities=15% Similarity=0.131 Sum_probs=143.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||+++++.|+++ +++|++++|.... ...+ ..+++++.+|+.|.+. +++ .++|+|||
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~--~~~~-----~~~~~~~~~D~~d~~~--~~~--~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGK--ITQT-----HKDINILQKDIFDLTL--SDL--SDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHH--HHHH-----CSSSEEEECCGGGCCH--HHH--TTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchh--hhhc-----cCCCeEEeccccChhh--hhh--cCCCEEEE
Confidence 58999999999999999999999 6899999986421 1111 1578999999999987 666 68999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||.... ....|+.++.++++++++.+ ++++|++||..+|....... ...|+.+..|.+.|+.+|...
T Consensus 68 ~ag~~~~---------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~--~~~~~~~~~~~~~y~~~k~~~ 135 (221)
T 3ew7_A 68 AYGISPD---------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGN--TLLESKGLREAPYYPTARAQA 135 (221)
T ss_dssp CCCSSTT---------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC---------------------CCCSCCHHHHH
T ss_pred CCcCCcc---------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCc--cccccCCCCCHHHHHHHHHHH
Confidence 9997431 13569999999999999976 89999999987665443221 124555666778899999999
Q ss_pred HHHHHHHHH-hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-C
Q 005949 167 EMLVMAYGR-SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244 (668)
Q Consensus 167 E~~~~~~~~-~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~ 244 (668)
|.+. .+.. +.+++++++||+.+|||+.....+ ...+..+.+.+++ .++++++|+|++++.+++++. .
T Consensus 136 e~~~-~~~~~~~gi~~~ivrp~~v~g~~~~~~~~-------~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~ 204 (221)
T 3ew7_A 136 KQLE-HLKSHQAEFSWTYISPSAMFEPGERTGDY-------QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHL 204 (221)
T ss_dssp HHHH-HHHTTTTTSCEEEEECSSCCCCC-------------------------------CCCHHHHHHHHHHHHHSCSCT
T ss_pred HHHH-HHHhhccCccEEEEeCcceecCCCccCce-------EeccccceecCCC---CceEeHHHHHHHHHHHHhCcccc
Confidence 9873 3333 569999999999999994421111 1123333333333 269999999999999999876 5
Q ss_pred CceEEEcCCCcccHHH
Q 005949 245 GHVYNVGTKKERRVID 260 (668)
Q Consensus 245 ~~~~ni~~~~~~s~~e 260 (668)
+++||++++.+.+..|
T Consensus 205 g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 205 NEHFTVAGKLEHHHHH 220 (221)
T ss_dssp TSEEECCC--------
T ss_pred CCEEEECCCCcccccc
Confidence 8899999887766554
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-27 Score=244.19 Aligned_cols=201 Identities=17% Similarity=0.171 Sum_probs=169.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccccccc-CChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL-EDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNV 462 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~-~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv 462 (668)
|||+|||||||||++|+++|+++|+ +.++..|+ .|++++.++++++ |+|||+||.. . ..++...++.|+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~~~--d~Vih~a~~~---~----~~~~~~~~~~n~ 70 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-HHIFEVHRQTKEEELESALLKA--DFIVHLAGVN---R----PEHDKEFSLGNV 70 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHHHC--SEEEECCCSB---C----TTCSTTCSSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhccC--CEEEECCcCC---C----CCCHHHHHHHHH
Confidence 6999999999999999999999997 34456678 8999999999975 9999999976 2 346788899999
Q ss_pred hhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeee
Q 005949 463 AGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 540 (668)
Q Consensus 463 ~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 540 (668)
.++.+|+++|++.++ ++|++||..+|+ .+.|+.+|..+|++++.+.+..+++++++
T Consensus 71 ~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~ 128 (369)
T 3st7_A 71 SYLDHVLDILTRNTKKPAILLSSSIQATQ----------------------DNPYGESKLQGEQLLREYAEEYGNTVYIY 128 (369)
T ss_dssp BHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCchhhcC----------------------CCCchHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 999999999999986 588888888772 37899999999999999877779999999
Q ss_pred ecCCCCChh----------hHHHHhhcccceeec----CCCcccHhhHHHHHHHHHhcc-C--CceeeecCCCccCHHHH
Q 005949 541 ISSDLNNPR----------NFITKISRYNKVVNI----PNSMTVLDELLPISIEMAKRN-L--RGIWNFTNPGVVSHNEI 603 (668)
Q Consensus 541 r~~~~~g~~----------~~~~~~~~~~~~~~~----~~~~~~v~D~a~~~~~~~~~~-~--~g~~ni~~~~~~s~~e~ 603 (668)
|++++|||. .++..+..+...... ..+++|++|+|++++.+++++ . +++||+++++.+|+.|+
T Consensus 129 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~ 208 (369)
T 3st7_A 129 RWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI 208 (369)
T ss_dssp EECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHH
T ss_pred ECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHH
Confidence 999999985 233444444433222 128999999999999999876 3 68999999999999999
Q ss_pred HHHHHhhcCCCCC
Q 005949 604 LEMYKKYINPEFK 616 (668)
Q Consensus 604 ~~~i~~~~g~~~~ 616 (668)
++.+++.+|.+..
T Consensus 209 ~~~~~~~~g~~~~ 221 (369)
T 3st7_A 209 VDLLYKFKQSRLD 221 (369)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcc
Confidence 9999999887643
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-27 Score=223.62 Aligned_cols=211 Identities=18% Similarity=0.168 Sum_probs=162.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
|.. ++|+||||||||+||+++++.|+++|+.++|++++|.... ...+++++.+|+.|.+.+.+++
T Consensus 1 M~~-~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~---- 65 (215)
T 2a35_A 1 MHS-TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS---- 65 (215)
T ss_dssp ----CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC----
T ss_pred CCC-CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh----
Confidence 554 4579999999999999999999999543499999986432 1347888999999988776665
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhH
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYS 160 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~ 160 (668)
+|+|||+||.... ...++...+++|+.++.++++++++.+ +++||++||..+|+. |.+.|+
T Consensus 66 ~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~----------------~~~~y~ 126 (215)
T 2a35_A 66 IDTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------SSIFYN 126 (215)
T ss_dssp CSEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHH
T ss_pred hcEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC----------------CccHHH
Confidence 9999999997542 245677899999999999999999976 889999999998863 245799
Q ss_pred HHHHHHHHHHHHHHHhcCCC-EEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLP-VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~ 239 (668)
.+|..+|.+++. .+++ ++++||+.+|||.... .++..+ . +...++ .+ ..++++|++|+|++++.++
T Consensus 127 ~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~-~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~ 193 (215)
T 2a35_A 127 RVKGELEQALQE----QGWPQLTIARPSLLFGPREEF-RLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLA 193 (215)
T ss_dssp HHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCE-EGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcc-hHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHH
Confidence 999999998864 3899 9999999999997632 222111 1 122222 22 2678999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHH
Q 005949 240 HKGEVGHVYNVGTKKERRVI 259 (668)
Q Consensus 240 ~~~~~~~~~ni~~~~~~s~~ 259 (668)
+++. +++||+++++..++.
T Consensus 194 ~~~~-~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 194 LEEG-KGVRFVESDELRKLG 212 (215)
T ss_dssp TCCC-SEEEEEEHHHHHHHH
T ss_pred hcCC-CCceEEcHHHHHHhh
Confidence 8875 789999987665543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-26 Score=226.15 Aligned_cols=239 Identities=10% Similarity=0.069 Sum_probs=177.7
Q ss_pred EEEEEcCCcchhHHHHHHHHHc--CCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKE--GIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~--g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
||+||||+||||+++++.|+++ |++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~a~~~-- 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGV--EKLLLISSSE-- 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTC--SEEEECC-----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCC--CEEEEeCCCC--
Confidence 4899999999999999999998 8865 34568999999999999876 9999999843
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
. ..|+.++.+++++|++.++ ++|++||..+| . .+ ..|+.+|..+|
T Consensus 77 --~-----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~----~----------------~~-~~y~~sK~~~e 122 (286)
T 2zcu_A 77 --V-----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD----T----------------SP-LGLADEHIETE 122 (286)
T ss_dssp ------------------CHHHHHHHHHHHHTCCEEEEEEETTTT----T----------------CC-STTHHHHHHHH
T ss_pred --c-----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC----C----------------Cc-chhHHHHHHHH
Confidence 0 1478999999999999998 67777776654 0 11 47999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh-hHHHHhhccccee----ecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCC
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVV----NIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPG 596 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~----~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~ 596 (668)
++++. .+++++++|++.++++. .++..++..+... ....+++|++|+|++++.+++++ .+++||+++++
T Consensus 123 ~~~~~----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~ 198 (286)
T 2zcu_A 123 KMLAD----SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDS 198 (286)
T ss_dssp HHHHH----HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSS
T ss_pred HHHHH----cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCC
Confidence 99975 57999999996554432 3344444333322 12238999999999999999875 46799999999
Q ss_pred ccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhc------------------cCCCCCccChhHHHhhcC-CccChHHHH
Q 005949 597 VVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIV------------------APRSNNEMDASKLKKEFP-ELLSIKDSL 657 (668)
Q Consensus 597 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~ld~~k~~~~~g-~~~~~~~~l 657 (668)
.+|+.|+++.+.+.+|.+.++..++......... ........|++|+++.+| +.++++++|
T Consensus 199 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~e~l 278 (286)
T 2zcu_A 199 AWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESV 278 (286)
T ss_dssp CBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHHHHH
Confidence 9999999999999999987766666543211000 001124568999999888 778999999
Q ss_pred HHHHhccC
Q 005949 658 IKYVFEPN 665 (668)
Q Consensus 658 ~~~~~~~~ 665 (668)
++++++++
T Consensus 279 ~~~~~~~~ 286 (286)
T 2zcu_A 279 SHLFNVNN 286 (286)
T ss_dssp HGGGC---
T ss_pred HHHHhhcC
Confidence 99998764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-26 Score=243.70 Aligned_cols=218 Identities=17% Similarity=0.214 Sum_probs=160.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------------ccccccCChhHHHH
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------------YGKGRLEDCSSLIA 425 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------------~~~~D~~d~~~~~~ 425 (668)
.||+||||||+||||+++++.|++.|++|. ++.+|++|++.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 457999999999999999999999987653 3345777766555
Q ss_pred HhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 426 DVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 426 ~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
.+ .++|+|||+||.. . ...++...+++|+.|+.+++++|.+.+.++|++||..+ |.....+ ....++.|+
T Consensus 147 ~~--~~~d~Vih~A~~~---~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~-~~~~~~~E~ 216 (427)
T 4f6c_A 147 LP--ENMDTIIHAGART---D---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDID-TEDVTFSEA 216 (427)
T ss_dssp CS--SCCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSS-CSCCEECTT
T ss_pred Cc--CCCCEEEECCccc---C---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCC-CCCcccccc
Confidence 22 2579999999976 2 23567788999999999999999994458889999888 4321111 112334444
Q ss_pred CC--CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---------------hHHHHhhccccee----ec
Q 005949 506 DT--PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------------NFITKISRYNKVV----NI 564 (668)
Q Consensus 506 ~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------------~~~~~~~~~~~~~----~~ 564 (668)
+. +..+.+.|+.||+++|++++.+.+ .+++++++|++++||+. .++..+...+... +.
T Consensus 217 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (427)
T 4f6c_A 217 DVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM 295 (427)
T ss_dssp CSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTC
T ss_pred ccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccc
Confidence 43 134678999999999999999754 58999999999999985 1233333333332 23
Q ss_pred CCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcC
Q 005949 565 PNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYIN 612 (668)
Q Consensus 565 ~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 612 (668)
..++++++|+|++++.++.++ .+++||+++++++|+.|+++.+++ +|
T Consensus 296 ~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 296 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp EECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred eEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 348999999999999999876 788999999999999999999998 56
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=225.64 Aligned_cols=230 Identities=14% Similarity=0.139 Sum_probs=174.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+||||||||+||+++++.|+++| +++|++++|.........+ ...+++++.+|+.|++.+.+++ .++|+||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~~~l----~~~~~~~~~~D~~d~~~l~~~~--~~~d~vi 77 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKEL----RLQGAEVVQGDQDDQVIMELAL--NGAYATF 77 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHHHHH----HHTTCEEEECCTTCHHHHHHHH--TTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHHHHH----HHCCCEEEEecCCCHHHHHHHH--hcCCEEE
Confidence 5799999999999999999999983 2889999886432111111 1246889999999999999999 6899999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+++.... ...+.|+.++.++++++++.+ +++||++||..+|+.... .+..+|+.+|..
T Consensus 78 ~~a~~~~~--------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~------------~~~~~y~~sK~~ 136 (299)
T 2wm3_A 78 IVTNYWES--------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTAG------------RLAAAHFDGKGE 136 (299)
T ss_dssp ECCCHHHH--------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTTT------------SCCCHHHHHHHH
T ss_pred EeCCCCcc--------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCCC------------cccCchhhHHHH
Confidence 99985211 023567889999999999987 899999988888764321 134679999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCcee-ecCCCceEeceeHHHHHHHHHHHHhcCC-
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI-HGDGSNVRSYLYCEDVAEAFECILHKGE- 243 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~ai~~~~~~~~- 243 (668)
+|.+++. .+++++++||+.+||+... .+++. ....+....+ .+.+...++|+|++|+|+++..++..+.
T Consensus 137 ~e~~~~~----~gi~~~ilrp~~~~~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~ 207 (299)
T 2wm3_A 137 VEEYFRD----IGVPMTSVRLPCYFENLLS--HFLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK 207 (299)
T ss_dssp HHHHHHH----HTCCEEEEECCEEGGGGGT--TTCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH
T ss_pred HHHHHHH----CCCCEEEEeecHHhhhchh--hcCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh
Confidence 9999865 3899999999999997431 11100 0112322121 2346788999999999999999988642
Q ss_pred -CCceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005949 244 -VGHVYNVGTKKERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 244 -~~~~~ni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
.+++|++++ +.+|+.|+++.+.+.+|.+.
T Consensus 208 ~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~ 237 (299)
T 2wm3_A 208 YVGQNIGLST-CRHTAEEYAALLTKHTRKVV 237 (299)
T ss_dssp HTTCEEECCS-EEECHHHHHHHHHHHHSSCE
T ss_pred hCCeEEEeee-ccCCHHHHHHHHHHHHCCCc
Confidence 578999985 67999999999999999753
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=215.64 Aligned_cols=218 Identities=17% Similarity=0.166 Sum_probs=164.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||+++++.|++++ +++|++++|.... ...+ ...+++++.+|+.|++.+.+++ .++|+|||
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~-g~~V~~~~R~~~~--~~~~----~~~~v~~~~~D~~d~~~l~~~~--~~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANH-IDHFHIGVRNVEK--VPDD----WRGKVSVRQLDYFNQESMVEAF--KGMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CTTEEEEESSGGG--SCGG----GBTTBEEEECCTTCHHHHHHHT--TTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCC-CCcEEEEECCHHH--HHHh----hhCCCEEEEcCCCCHHHHHHHH--hCCCEEEE
Confidence 479999999999999999988862 5678888886432 1111 2357999999999999999999 68999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+.... ...|+.++.+++++|++.+ +++||++||.+. .. .. | ..+...+..+
T Consensus 72 ~a~~~~~----------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~~---------~~---~-~~~~~~~~~~ 124 (289)
T 3e48_A 72 IPSIIHP----------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---QH---------NN---P-FHMSPYFGYA 124 (289)
T ss_dssp CCCCCCS----------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---ST---------TC---C-STTHHHHHHH
T ss_pred eCCCCcc----------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---CC---------CC---C-CccchhHHHH
Confidence 9986432 1358999999999999987 899999999432 11 00 1 1133333445
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC-C
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV-G 245 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~-~ 245 (668)
|..+. +.+++++++||+.++|+. ...+. ....+.. ...+.+.+.++|++++|+|++++.++..+.. +
T Consensus 125 e~~~~----~~g~~~~ilrp~~~~~~~------~~~~~-~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g 192 (289)
T 3e48_A 125 SRLLS----TSGIDYTYVRMAMYMDPL------KPYLP-ELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTWG 192 (289)
T ss_dssp HHHHH----HHCCEEEEEEECEESTTH------HHHHH-HHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred HHHHH----HcCCCEEEEecccccccc------HHHHH-HHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcCC
Confidence 55443 448999999999999973 22222 2222222 3346678899999999999999999987654 7
Q ss_pred ceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005949 246 HVYNVGTKKERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 246 ~~~ni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
++||++ ++.+|+.|+++.+.+.+|.+.
T Consensus 193 ~~~~~~-~~~~s~~e~~~~~~~~~g~~~ 219 (289)
T 3e48_A 193 KRYLLS-GYSYDMKELAAILSEASGTEI 219 (289)
T ss_dssp CEEEEC-CEEEEHHHHHHHHHHHHTSCC
T ss_pred ceEEeC-CCcCCHHHHHHHHHHHHCCce
Confidence 899999 999999999999999999864
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=229.68 Aligned_cols=203 Identities=17% Similarity=0.208 Sum_probs=164.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHc-CC-cc----------------------cccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKE-GI-PF----------------------EYGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~-g~-~v----------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
+|+||||||+||||+++++.|+++ |+ +| .++.+|++|.+++.++++++ |+|||+
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--D~Vih~ 98 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGV--DICIHA 98 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTC--SEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcC--CEEEEC
Confidence 368999999999999999999999 97 54 34567999999999999865 999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
||.. .+..++.++...+++|+.|+.+++++|.+.++ ++|++||..++ .|.+.|+.
T Consensus 99 Aa~~---~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~---------------------~p~~~Y~~ 154 (344)
T 2gn4_A 99 AALK---HVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA---------------------NPINLYGA 154 (344)
T ss_dssp CCCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---------------------SCCSHHHH
T ss_pred CCCC---CCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---------------------CCccHHHH
Confidence 9977 45555667889999999999999999999998 67777775433 23478999
Q ss_pred hHHHHHHHHHhccC---eeEeEEeeeecCCCCChh-----hHHHHhhccc-ceeecC----CCcccHhhHHHHHHHHHhc
Q 005949 518 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYN-KVVNIP----NSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 518 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~-~~~~~~----~~~~~v~D~a~~~~~~~~~ 584 (668)
||.++|+++..+.+ ..+++++++|++++||+. .|+.++..+. +..... .+++|++|+|++++.++++
T Consensus 155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~ 234 (344)
T 2gn4_A 155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR 234 (344)
T ss_dssp HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 99999999998764 257999999999999986 3444555554 332221 2689999999999999987
Q ss_pred cC-CceeeecCCCccCHHHHHHHHHhhcC
Q 005949 585 NL-RGIWNFTNPGVVSHNEILEMYKKYIN 612 (668)
Q Consensus 585 ~~-~g~~ni~~~~~~s~~e~~~~i~~~~g 612 (668)
.. +++||++++ .+|+.|+++.+.+.++
T Consensus 235 ~~~g~~~~~~~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 235 MHGGEIFVPKIP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp CCSSCEEEECCC-EEEHHHHHHHHCTTCC
T ss_pred ccCCCEEecCCC-cEEHHHHHHHHHHhCC
Confidence 64 559998776 6999999999987654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=245.89 Aligned_cols=218 Identities=17% Similarity=0.201 Sum_probs=161.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------------ccccccCChhHHHH
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------------YGKGRLEDCSSLIA 425 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------------~~~~D~~d~~~~~~ 425 (668)
.||+|||||||||||++|+++|++.|++|. ++.+|++|++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 358999999999999999999998887653 3345777755555
Q ss_pred HhhhcCCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 426 DVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 426 ~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
.. .++|+|||+||.. . ...++...+++|+.++.+|+++|++.+.+++|+||..+ |.....+ ....++.|+
T Consensus 228 ~~--~~~D~Vih~Aa~~---~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~-~~~~~~~E~ 297 (508)
T 4f6l_B 228 LP--ENMDTIIHAGART---D---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDID-TEDVTFSEA 297 (508)
T ss_dssp CS--SCCSEEEECCCC--------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTT-CSCCEECTT
T ss_pred Cc--cCCCEEEECCcee---c---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccC-CcCcccccc
Confidence 22 2579999999966 2 24467788889999999999999996568999999988 3221111 012234444
Q ss_pred CCC--CCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---------------hHHHHhhcccceee----c
Q 005949 506 DTP--NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---------------NFITKISRYNKVVN----I 564 (668)
Q Consensus 506 ~~~--~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---------------~~~~~~~~~~~~~~----~ 564 (668)
+.. ..+.+.|+.+|+.+|++++.+.+ .+++++++|++++||+. .++..+...+.... .
T Consensus 298 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~ 376 (508)
T 4f6l_B 298 DVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM 376 (508)
T ss_dssp CSCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGS
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCc
Confidence 431 34678999999999999999754 58999999999999985 12233333333322 2
Q ss_pred CCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhc
Q 005949 565 PNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYI 611 (668)
Q Consensus 565 ~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~ 611 (668)
..+++|++|+|++++.++.++ .+++||+++++.+|+.|+++.+++..
T Consensus 377 ~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 377 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp EEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred eEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 338999999999999999876 78899999999999999999999865
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-25 Score=224.58 Aligned_cols=231 Identities=21% Similarity=0.228 Sum_probs=170.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEcc-CCCHHHHHHHhccC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGD-IASADLVNFLLITE 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~ 79 (668)
|+ |++|+|||||||||||++|++.|+++ +++|++++|.........+. ...+++++.+| ++|.+++.+++ .
T Consensus 1 M~-~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~--~ 72 (352)
T 1xgk_A 1 MA-QQKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLF--E 72 (352)
T ss_dssp ---CCCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHH--T
T ss_pred CC-CCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHH--h
Confidence 44 34679999999999999999999998 57888888864321101111 12368899999 99999999998 6
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc--ccCCCCCCcCCCCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE--VYGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~--vyg~~~~~~~~~~~e~~~~~p~~ 157 (668)
++|+|||+++... . ..|+.+ ++++++|++.+++++||++||.. .|+. .+.+
T Consensus 73 ~~d~Vi~~a~~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~---------------~~~~ 125 (352)
T 1xgk_A 73 GAHLAFINTTSQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP---------------WPAV 125 (352)
T ss_dssp TCSEEEECCCSTT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS---------------CCCC
T ss_pred cCCEEEEcCCCCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC---------------CCCc
Confidence 7999999987532 1 236666 99999999875478999999975 3332 1245
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCc--eeecCCCceEeceeH-HHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPL--PIHGDGSNVRSYLYC-EDVAEA 234 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v-~D~a~a 234 (668)
+|+.+|..+|++++. .+++++++||+ +||++.... ..+.+.......+.. .+++++.+.++++|+ +|+|++
T Consensus 126 ~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~a 199 (352)
T 1xgk_A 126 PMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSL-PYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPA 199 (352)
T ss_dssp TTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSS-SCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhc-ccccccccccCCCceEEeeccCCCCceeeEecHHHHHHH
Confidence 799999999999875 38999999976 788865321 100000010122222 335667889999999 899999
Q ss_pred HHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCC
Q 005949 235 FECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 235 i~~~~~~~~---~~~~~ni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
++.+++.+. .+++||+++ +.+|+.|+++.+.+.+|.+.
T Consensus 200 i~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 200 LLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp HHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred HHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCC
Confidence 999998752 578999995 67999999999999999864
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=197.58 Aligned_cols=202 Identities=14% Similarity=0.153 Sum_probs=154.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|+||||||||+||+++++.|+++ +++|++++|.... ... ....+++++.+|+.|.+.+.+++ .++|+||
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~--~~~----~~~~~~~~~~~D~~~~~~~~~~~--~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSR--LPS----EGPRPAHVVVGDVLQAADVDKTV--AGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGG--SCS----SSCCCSEEEESCTTSHHHHHHHH--TTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhh--ccc----ccCCceEEEEecCCCHHHHHHHH--cCCCEEE
Confidence 379999999999999999999999 6899999986432 111 11357899999999999999998 6799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+|+.... .++ .+.|+.++.++++++++.+ +++||++||..+|+.....+ .+...|+.+|..
T Consensus 73 ~~a~~~~~----~~~---~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~----------~~~~~y~~~K~~ 134 (206)
T 1hdo_A 73 VLLGTRND----LSP---TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVP----------PRLQAVTDDHIR 134 (206)
T ss_dssp ECCCCTTC----CSC---CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSC----------GGGHHHHHHHHH
T ss_pred ECccCCCC----CCc---cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCccccc----------ccchhHHHHHHH
Confidence 99997543 111 2478999999999999876 89999999999998654211 145689999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC-C
Q 005949 166 AEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE-V 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~ 244 (668)
+|.+++ +.+++++++||+.+ +++.....+. ....+ ....++++++|+|++++.+++++. .
T Consensus 135 ~e~~~~----~~~i~~~~lrp~~~-~~~~~~~~~~-------------~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~~~ 195 (206)
T 1hdo_A 135 MHKVLR----ESGLKYVAVMPPHI-GDQPLTGAYT-------------VTLDG-RGPSRVISKHDLGHFMLRCLTTDEYD 195 (206)
T ss_dssp HHHHHH----HTCSEEEEECCSEE-ECCCCCSCCE-------------EESSS-CSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred HHHHHH----hCCCCEEEEeCCcc-cCCCCCcceE-------------ecccC-CCCCCccCHHHHHHHHHHHhcCcccc
Confidence 999885 34899999999998 4433211110 00011 000489999999999999998765 5
Q ss_pred CceEEEcCCC
Q 005949 245 GHVYNVGTKK 254 (668)
Q Consensus 245 ~~~~ni~~~~ 254 (668)
+++|+++++.
T Consensus 196 g~~~~i~~g~ 205 (206)
T 1hdo_A 196 GHSTYPSHQY 205 (206)
T ss_dssp TCEEEEECCC
T ss_pred ccceeeeccc
Confidence 7899999764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-25 Score=220.80 Aligned_cols=206 Identities=13% Similarity=0.157 Sum_probs=166.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCCc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNV 447 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~ 447 (668)
||+|+||||+||||+++++.|+++|++| .++.+|++|++++.++++++ |+|||+||..
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vi~~Ag~~----- 75 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGC--DGIVHLGGIS----- 75 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTC--SEEEECCSCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCC--CEEEECCCCc-----
Confidence 4579999999999999999999999864 45668999999999999965 9999999965
Q ss_pred cccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHH
Q 005949 448 DWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELL 526 (668)
Q Consensus 448 ~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~ 526 (668)
...+....+++|+.|+.+|+++|++.++ ++|++||..+|+...... ...|+.+..+.+.|+.||..+|.++
T Consensus 76 --~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~------~~~e~~~~~~~~~Y~~sK~~~e~~~ 147 (267)
T 3rft_A 76 --VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTE------RLGPDVPARPDGLYGVSKCFGENLA 147 (267)
T ss_dssp --SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTS------CBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred --CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCC------CCCCCCCCCCCChHHHHHHHHHHHH
Confidence 3455678899999999999999999987 788899999997543321 3566677778899999999999999
Q ss_pred HhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccC--CceeeecCCCccCHHHHH
Q 005949 527 KEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL--RGIWNFTNPGVVSHNEIL 604 (668)
Q Consensus 527 ~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~--~g~~ni~~~~~~s~~e~~ 604 (668)
+.+.+.++++++++|+++++++..- .....++++++|+++++..+++.+. ..++++++++..++.++.
T Consensus 148 ~~~a~~~g~~~~~vr~~~v~~~~~~----------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 217 (267)
T 3rft_A 148 RMYFDKFGQETALVRIGSCTPEPNN----------YRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDNS 217 (267)
T ss_dssp HHHHHHHCCCEEEEEECBCSSSCCS----------TTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCCG
T ss_pred HHHHHHhCCeEEEEEeecccCCCCC----------CCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccCh
Confidence 9887778999999999999987210 0111257899999999999998763 458999998888887764
Q ss_pred HHHHhhcCCCC
Q 005949 605 EMYKKYINPEF 615 (668)
Q Consensus 605 ~~i~~~~g~~~ 615 (668)
.. +.+|...
T Consensus 218 ~~--~~~g~~p 226 (267)
T 3rft_A 218 HL--GFLGWKP 226 (267)
T ss_dssp GG--GGGCCCC
T ss_pred hH--HHCCCCC
Confidence 33 5667643
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.6e-26 Score=222.86 Aligned_cols=205 Identities=13% Similarity=0.127 Sum_probs=161.4
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|||+|+||||+||||++++++|+++|++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~vi~~a~~~---- 74 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDC--DGIIHLGGVS---- 74 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTC--SEEEECCSCC----
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCC--CEEEECCcCC----
Confidence 45689999999999999999999999865 34568999999999999865 9999999965
Q ss_pred ccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCC-CCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 447 VDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAA-HPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 447 ~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~-~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
...+....+++|+.++.+++++|++.++ ++|++||..+|+.... .| ..|+.+..|.+.|+.+|..+|+
T Consensus 75 ---~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~e~ 144 (267)
T 3ay3_A 75 ---VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTR-------IDTEVPRRPDSLYGLSKCFGED 144 (267)
T ss_dssp ---SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSC-------BCTTSCCCCCSHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCC-------CCCCCCCCCCChHHHHHHHHHH
Confidence 2344567788999999999999999887 7889999999976432 22 4555666777999999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccC--CceeeecCCCccCHHH
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL--RGIWNFTNPGVVSHNE 602 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~--~g~~ni~~~~~~s~~e 602 (668)
+++.+.+..+++++++|++++|+.... .....++++++|+|++++.+++++. .++||+.++...++.+
T Consensus 145 ~~~~~~~~~gi~~~~lrp~~v~~~~~~----------~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 214 (267)
T 3ay3_A 145 LASLYYHKFDIETLNIRIGSCFPKPKD----------ARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESWWD 214 (267)
T ss_dssp HHHHHHHTTCCCEEEEEECBCSSSCCS----------HHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCSSCCBC
T ss_pred HHHHHHHHcCCCEEEEeceeecCCCCC----------CCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCccccccC
Confidence 998876557899999999999843110 0112368899999999999998763 4689988876666666
Q ss_pred HHHHHHhhcCCC
Q 005949 603 ILEMYKKYINPE 614 (668)
Q Consensus 603 ~~~~i~~~~g~~ 614 (668)
+.+. +.+|.+
T Consensus 215 ~~~~--~~lg~~ 224 (267)
T 3ay3_A 215 NDKS--AFLGWV 224 (267)
T ss_dssp CGGG--GGGCCC
T ss_pred HHHH--HHcCCC
Confidence 6555 555544
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=223.36 Aligned_cols=247 Identities=14% Similarity=0.167 Sum_probs=182.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
|+|+|||||||||+++++.|++.|++|. ++.+|++|.+++.++++..++|+|||+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 6899999999999999999999998652 346899999999999996667999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
|+. .|+.++.+|+++|++.+ ++.+++| +||.. .+|+.+..|.+.|+.
T Consensus 91 a~~------------------~n~~~~~~l~~aa~~~g~v~~~v~S---~~g~~-----------~~e~~~~~p~~~y~~ 138 (346)
T 3i6i_A 91 VGG------------------ESILDQIALVKAMKAVGTIKRFLPS---EFGHD-----------VNRADPVEPGLNMYR 138 (346)
T ss_dssp CCG------------------GGGGGHHHHHHHHHHHCCCSEEECS---CCSSC-----------TTTCCCCTTHHHHHH
T ss_pred Cch------------------hhHHHHHHHHHHHHHcCCceEEeec---ccCCC-----------CCccCcCCCcchHHH
Confidence 983 28899999999999999 8877764 35421 234455567789999
Q ss_pred hHHHHHHHHHhccCeeEeEEeeeecCCCCChh--hHHHHh---hcccceeec-----CCCcccHhhHHHHHHHHHhcc--
Q 005949 518 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NFITKI---SRYNKVVNI-----PNSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~~---~~~~~~~~~-----~~~~~~v~D~a~~~~~~~~~~-- 585 (668)
+|..+|++++. .+++++++|++.++|.. .+.... ...+..... ..+++|++|+|++++.++..+
T Consensus 139 sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~ 214 (346)
T 3i6i_A 139 EKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT 214 (346)
T ss_dssp HHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHH----cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc
Confidence 99999999987 47899999999888854 222211 122222222 237999999999999999875
Q ss_pred CCceeeecC-CCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccC-CC----------------CCccC-----hhH
Q 005949 586 LRGIWNFTN-PGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAP-RS----------------NNEMD-----ASK 642 (668)
Q Consensus 586 ~~g~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-~~----------------~~~ld-----~~k 642 (668)
.+++||+++ ++.+|+.|+++.+.+.+|.+.++..++..+........ .+ ....+ ..+
T Consensus 215 ~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 294 (346)
T 3i6i_A 215 LNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVE 294 (346)
T ss_dssp TTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEE
T ss_pred cCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCccc
Confidence 477899985 58999999999999999999887777655432111111 00 01122 234
Q ss_pred HHhhcC--CccChHHHHHHHHhccCC
Q 005949 643 LKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 643 ~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
+.+++. +++++++.|++++.++..
T Consensus 295 ~~~~~p~~~~t~~~e~l~~~~~~~~~ 320 (346)
T 3i6i_A 295 VTTLYPEDSFRTVEECFGEYIVKMEE 320 (346)
T ss_dssp HHHHSTTCCCCCHHHHHHHHHCC---
T ss_pred HHHhCCCCCcCcHHHHHHHHHHHhhc
Confidence 666666 668999999999998864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=207.51 Aligned_cols=211 Identities=13% Similarity=0.041 Sum_probs=159.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|++|+||||||+|+||+++++.|+++|+..+|++++|.... .... ...++.++.+|++|.+.+.+++ .++|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~--~~~~----~~~~~~~~~~D~~d~~~~~~~~--~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT--FDEE----AYKNVNQEVVDFEKLDDYASAF--QGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC--CCSG----GGGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC--cccc----ccCCceEEecCcCCHHHHHHHh--cCCCE
Confidence 35689999999999999999999999432289999886432 1111 1236789999999999999888 58999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+||..... .++...+++|+.++.++++++++.+ +++||++||..+|+. +...|+.+|
T Consensus 88 vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~----------------~~~~Y~~sK 147 (242)
T 2bka_A 88 GFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------SNFLYLQVK 147 (242)
T ss_dssp EEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------CSSHHHHHH
T ss_pred EEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC----------------CcchHHHHH
Confidence 99999975321 2346788999999999999999876 789999999988763 235799999
Q ss_pred HHHHHHHHHHHHhcCC-CEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 164 AGAEMLVMAYGRSYGL-PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
..+|.+++.+ ++ +++++||+.++||...+ .....+........+.. .+ ...+++++|+|++++.+++.+
T Consensus 148 ~~~e~~~~~~----~~~~~~~vrpg~v~~~~~~~-~~~~~~~~~~~~~~~~~-~~----~~~~~~~~dva~~~~~~~~~~ 217 (242)
T 2bka_A 148 GEVEAKVEEL----KFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLPDS-WA----SGHSVPVVTVVRAMLNNVVRP 217 (242)
T ss_dssp HHHHHHHHTT----CCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCCTT-GG----GGTEEEHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHhc----CCCCeEEEcCceecCCCCCC-cHHHHHHHHhhcccCcc-cc----CCcccCHHHHHHHHHHHHhCc
Confidence 9999988653 67 59999999999997532 23333333333322211 11 124899999999999999988
Q ss_pred CCCceEEEcC
Q 005949 243 EVGHVYNVGT 252 (668)
Q Consensus 243 ~~~~~~ni~~ 252 (668)
...+.|++.+
T Consensus 218 ~~~~~~~~~~ 227 (242)
T 2bka_A 218 RDKQMELLEN 227 (242)
T ss_dssp CCSSEEEEEH
T ss_pred cccCeeEeeH
Confidence 7766776653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=218.64 Aligned_cols=231 Identities=18% Similarity=0.203 Sum_probs=168.6
Q ss_pred CCCCC-CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 1 MATYT-PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 1 m~~~~-~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
|+.+. +++||||||||+||+++++.|+++ +++|++++|... .....+ ......+++++.+|+.|.+++.+++ .
T Consensus 5 m~~~~m~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~-~~~~~~-~~l~~~~v~~v~~Dl~d~~~l~~a~--~ 78 (318)
T 2r6j_A 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNS-SKTTLL-DEFQSLGAIIVKGELDEHEKLVELM--K 78 (318)
T ss_dssp ----CCCCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTC-SCHHHH-HHHHHTTCEEEECCTTCHHHHHHHH--T
T ss_pred ccccCCCCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCC-chhhHH-HHhhcCCCEEEEecCCCHHHHHHHH--c
Confidence 44333 358999999999999999999999 577888888642 111100 0011246899999999999999999 6
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-CCh
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNP 158 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~ 158 (668)
++|+|||+++... +.++.+++++|++.+.+++||+ | +||... ++..+..| ...
T Consensus 79 ~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~ 132 (318)
T 2r6j_A 79 KVDVVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVEE-------DRINALPPFEAL 132 (318)
T ss_dssp TCSEEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSCT-------TTCCCCHHHHHH
T ss_pred CCCEEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccCc-------ccccCCCCcchh
Confidence 8999999998632 3456899999998765889984 4 355321 12222223 246
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 238 (668)
| .+|..+|.+++. .+++++++||+.+++. +++.+......++.+.+++++...++|++++|++++++.+
T Consensus 133 y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~ 201 (318)
T 2r6j_A 133 I-ERKRMIRRAIEE----ANIPYTYVSANCFASY------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKV 201 (318)
T ss_dssp H-HHHHHHHHHHHH----TTCCBEEEECCEEHHH------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHh----cCCCeEEEEcceehhh------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHH
Confidence 8 999999998864 4899999999987753 3333333323445566778888999999999999999999
Q ss_pred HhcCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005949 239 LHKGE-VGHVYNVGT-KKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 239 ~~~~~-~~~~~ni~~-~~~~s~~el~~~i~~~~g~~~~ 274 (668)
++.+. .++.|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 202 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 202 ATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp TTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred hcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCc
Confidence 98754 467778764 5789999999999999998643
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=219.87 Aligned_cols=235 Identities=18% Similarity=0.170 Sum_probs=170.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC---CccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS---NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+|+||||||||+||+++++.|+++ +++|++++|..... ....+ ......+++++.+|+.|++++.+++ .++|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~l~~~~--~~~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQML-LYFKQLGAKLIEASLDDHQRLVDAL--KQVD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHH-HHHHTTTCEEECCCSSCHHHHHHHH--TTCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHH-HHHHhCCeEEEeCCCCCHHHHHHHH--hCCC
Confidence 568999999999999999999999 57888888864211 11000 0011357899999999999999999 6899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-CChhHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYSA 161 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~~ 161 (668)
+|||+++..... .|+.++.+++++|++.+.+++||+ | +||...... ..+..| ...| .
T Consensus 79 ~vi~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~------~~~~~p~~~~y-~ 136 (313)
T 1qyd_A 79 VVISALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM------EHALQPGSITF-I 136 (313)
T ss_dssp EEEECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC------CCCCSSTTHHH-H
T ss_pred EEEECCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc------ccCCCCCcchH-H
Confidence 999999975421 267788999999999766899985 3 455332110 122233 3468 9
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
+|..+|++++. .+++++++||+.++|+... .+..........++.+.+++++...++|++++|++++++.+++.
T Consensus 137 sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~ 210 (313)
T 1qyd_A 137 DKRKVRRAIEA----ASIPYTYVSSNMFAGYFAG--SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD 210 (313)
T ss_dssp HHHHHHHHHHH----TTCCBCEEECCEEHHHHTT--TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHh----cCCCeEEEEeceecccccc--ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhC
Confidence 99999998853 4899999999998875321 11000000012334455667888999999999999999999987
Q ss_pred CC-CCceEEEcCC-CcccHHHHHHHHHHHhCCCC
Q 005949 242 GE-VGHVYNVGTK-KERRVIDVAKDICKLFSMDP 273 (668)
Q Consensus 242 ~~-~~~~~ni~~~-~~~s~~el~~~i~~~~g~~~ 273 (668)
+. .++.|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 211 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 211 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred cccCCceEEEeCCCCccCHHHHHHHHHHhcCCCC
Confidence 64 4677887754 78999999999999999764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-24 Score=212.23 Aligned_cols=246 Identities=15% Similarity=0.144 Sum_probs=174.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|+ +++|+||||||+|+||++++++|+++ +++|++++|... .+..+.. ....++.++.+|++|.+.+.+++..
T Consensus 1 M~-~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (281)
T 3m1a_A 1 MS-ESAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTE--ALDDLVA-AYPDRAEAISLDVTDGERIDVVAADVL 74 (281)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGG--GGHHHHH-HCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CC-CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH-hccCCceEEEeeCCCHHHHHHHHHHHH
Confidence 54 45789999999999999999999999 688999988642 2222111 1234789999999999998887743
Q ss_pred ---CCCCEEEEcCccCCc----ccccCChHHHHHHHHHH----HHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYG----THVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ..+.+++...+++|+.| ++.+++.+++.+ .+++|++||...+.+.
T Consensus 75 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------- 145 (281)
T 3m1a_A 75 ARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF-------- 145 (281)
T ss_dssp HHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC--------
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC--------
Confidence 279999999997543 22334556788999999 555555556655 6899999998765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-----ChHHHHHHHHHcCCCceeecCC
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-----KLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
.+...|+.+|.+.|.+++.++.+ +++++++++||.|.++...+. ...+.+........... ..
T Consensus 146 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 216 (281)
T 3m1a_A 146 ------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV---QG 216 (281)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH---HC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH---hh
Confidence 23567999999999999998876 689999999999988753211 11111111111111110 11
Q ss_pred CceEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFS 270 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g 270 (668)
.....+.+++|+|++++.+++.+..+..|+++++....+.+....+.+.++
T Consensus 217 ~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 217 SDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp -----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 123467889999999999999988888999998877777777777776654
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-25 Score=209.31 Aligned_cols=191 Identities=13% Similarity=0.149 Sum_probs=151.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------cccccccCC-hhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------EYGKGRLED-CSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------~~~~~D~~d-~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|||+||||+||||+++++.|+++|++| .++.+|++| ++++.++++++ |+|||+||.. .
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~--d~vi~~ag~~---~ 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGM--DAIINVSGSG---G 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTC--SEEEECCCCT---T
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCC--CEEEECCcCC---C
Confidence 699999999999999999999999865 346789999 99999999865 9999999966 1
Q ss_pred ccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 447 VDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 447 ~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
...+++|+.++.+++++|++.++ ++|++||..+++.. + +.| .+..|.+.|+.+|..+|++
T Consensus 76 --------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~------~~e--~~~~~~~~Y~~sK~~~e~~ 136 (219)
T 3dqp_A 76 --------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---K------WIG--AGFDALKDYYIAKHFADLY 136 (219)
T ss_dssp --------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---G------CCS--HHHHHTHHHHHHHHHHHHH
T ss_pred --------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---c------ccc--cccccccHHHHHHHHHHHH
Confidence 34788999999999999999998 67778887665422 1 223 3344568999999999999
Q ss_pred HHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccCHHHH
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHNEI 603 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~e~ 603 (668)
++ +..+++++++||+.+||+... ... .......++++++|+|++++.+++++ .+++||++++. .++.|+
T Consensus 137 ~~---~~~~i~~~ilrp~~v~g~~~~--~~~---~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~ 207 (219)
T 3dqp_A 137 LT---KETNLDYTIIQPGALTEEEAT--GLI---DINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEA 207 (219)
T ss_dssp HH---HSCCCEEEEEEECSEECSCCC--SEE---EESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHH
T ss_pred HH---hccCCcEEEEeCceEecCCCC--Ccc---ccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHH
Confidence 96 236899999999999998420 000 01134458999999999999999876 46799998874 899998
Q ss_pred HHHH
Q 005949 604 LEMY 607 (668)
Q Consensus 604 ~~~i 607 (668)
.+.-
T Consensus 208 ~~~~ 211 (219)
T 3dqp_A 208 LESL 211 (219)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 7643
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=206.11 Aligned_cols=197 Identities=15% Similarity=0.132 Sum_probs=128.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPN 446 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~ 446 (668)
|||+|||||||||+++++.|+++|++| .++.+|++|+++ +.+.++ |+|||+||.. .
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi~~ag~~---~ 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQ--NVVVDAYGIS---P 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTC--SEEEECCCSS---T
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCC--CEEEECCcCC---c
Confidence 689999999999999999999999865 345678888877 667665 9999999965 1
Q ss_pred ccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 447 VDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 447 ~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
...+.|+.++.+++++|++.++ ++|++||..+|++....+ ...++.+..|.+.|+.+|..+|.+
T Consensus 74 ---------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~------~~~~~~~~~~~~~y~~~k~~~e~~ 138 (221)
T 3ew7_A 74 ---------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGN------TLLESKGLREAPYYPTARAQAKQL 138 (221)
T ss_dssp ---------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------------CCCSCCHHHHHHHH
T ss_pred ---------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCc------cccccCCCCCHHHHHHHHHHHHHH
Confidence 1256799999999999999976 788888887776544321 245555666778999999999997
Q ss_pred HHhccCeeEeEEeeeecCCCCChhhHHHHhhccccee---ecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccCH
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV---NIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSH 600 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~ 600 (668)
........+++++++||+.+|||.............. ..+.++++++|+|++++.+++++ .+++||++++...+.
T Consensus 139 ~~~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~ 218 (221)
T 3ew7_A 139 EHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHH 218 (221)
T ss_dssp HHHHTTTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC------
T ss_pred HHHHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccc
Confidence 3222214689999999999999854332222111111 12237999999999999999876 578999999988776
Q ss_pred HH
Q 005949 601 NE 602 (668)
Q Consensus 601 ~e 602 (668)
.|
T Consensus 219 ~~ 220 (221)
T 3ew7_A 219 HH 220 (221)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=210.53 Aligned_cols=228 Identities=15% Similarity=0.151 Sum_probs=168.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC-cc---CCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD-YC---SNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~-~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
+||+||||||||+||+++++.|+++ +++|++++|.. .. .....+. .....+++++.+|+.|.+++.+++ .+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~-~~~~~~v~~v~~D~~d~~~l~~a~--~~ 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLRE-EFRSMGVTIIEGEMEEHEKMVSVL--KQ 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHH--TT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHH-HhhcCCcEEEEecCCCHHHHHHHH--cC
Confidence 3578999999999999999999999 57788888864 11 0100000 001246899999999999999999 67
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-CChh
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPY 159 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y 159 (668)
+|+|||+|+... +.++.+++++|++.+.+++||+ | +||... +|..+..| .+.|
T Consensus 78 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y 131 (321)
T 3c1o_A 78 VDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE-------DRIKPLPPFESVL 131 (321)
T ss_dssp CSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG-------GGCCCCHHHHHHH
T ss_pred CCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc-------cccccCCCcchHH
Confidence 999999998632 3466899999998765889983 3 455321 12222223 3469
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHH---HHcCCCceeecCCCceEeceeHHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL---AMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~ 236 (668)
.+|..+|.+++. .+++++++||+.++|+ +.+.+... ...++.+.+++++...++|++++|++++++
T Consensus 132 -~sK~~~e~~~~~----~~~~~~~lrp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 200 (321)
T 3c1o_A 132 -EKKRIIRRAIEA----AALPYTYVSANCFGAY------FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI 200 (321)
T ss_dssp -HHHHHHHHHHHH----HTCCBEEEECCEEHHH------HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred -HHHHHHHHHHHH----cCCCeEEEEeceeccc------cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence 999999998864 3899999999988874 22222221 123455667788889999999999999999
Q ss_pred HHHhcCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005949 237 CILHKGE-VGHVYNVGT-KKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 237 ~~~~~~~-~~~~~ni~~-~~~~s~~el~~~i~~~~g~~~~ 274 (668)
.++..+. .++.|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 201 ~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp HHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred HHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence 9998764 467788875 5789999999999999998654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-24 Score=216.83 Aligned_cols=230 Identities=19% Similarity=0.212 Sum_probs=167.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC----CccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS----NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
||+||||||||+||+++++.|+++ +++|++++|..... ....+ ......+++++.+|+.|.+.+.+++ .++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~--~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAV--KNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHH--HTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHH--cCC
Confidence 568999999999999999999999 57888888864211 00000 0112357899999999999999999 579
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-CChhH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPYS 160 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y~ 160 (668)
|+|||+++... +.++.+++++|++.+.+++||+ |+ ||... ++..+..| ...|
T Consensus 79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~-------~~~~~~~p~~~~y- 131 (308)
T 1qyc_A 79 DVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV-------DNVHAVEPAKSVF- 131 (308)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT-------TSCCCCTTHHHHH-
T ss_pred CEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc-------cccccCCcchhHH-
Confidence 99999998632 3456899999999766899984 43 44321 22223334 3468
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~ 240 (668)
.+|..+|.+++. .+++++++||+.++|+... .+... ......++.+.+++++...++|++++|++++++.+++
T Consensus 132 ~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 132 EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLR--SLAQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTT--TTTCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHh----cCCCeEEEEeceecccccc--ccccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence 999999998864 3899999999999885321 11000 0001134456677888899999999999999999887
Q ss_pred cCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005949 241 KGE-VGHVYNVGT-KKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 241 ~~~-~~~~~ni~~-~~~~s~~el~~~i~~~~g~~~~ 274 (668)
.+. .++.|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~ 240 (308)
T 1qyc_A 205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 240 (308)
T ss_dssp CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 654 467788865 4789999999999999997643
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=207.57 Aligned_cols=230 Identities=18% Similarity=0.180 Sum_probs=166.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-----CccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-----NLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
||+||||||||+||+++++.|+++ +++|++++|..... ....+ ......+++++.+|+.|.+.+.+++ .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~--~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELI-DNYQSLGVILLEGDINDHETLVKAI--KQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHH--TT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHH-HHHHhCCCEEEEeCCCCHHHHHHHH--hC
Confidence 568999999999999999999999 57788888864100 00000 0011246899999999999999999 68
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC-CChh
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP-TNPY 159 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p-~~~Y 159 (668)
+|+|||+|+... +.++.+++++|++.+.+++||+ | +||... ++..+..| .+.|
T Consensus 77 ~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~-------~~~~~~~p~~~~y 130 (307)
T 2gas_A 77 VDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV-------DRHDAVEPVRQVF 130 (307)
T ss_dssp CSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT-------TSCCCCTTHHHHH
T ss_pred CCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc-------ccccCCCcchhHH
Confidence 999999998643 3456899999998765889983 3 355321 12223333 3568
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~ 239 (668)
.+|..+|.+++. .+++++++||+.++++... .+.. .......++.+.+++++...++|++++|+|++++.++
T Consensus 131 -~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (307)
T 2gas_A 131 -EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLR--NLAQ-LDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202 (307)
T ss_dssp -HHHHHHHHHHHH----HTCCBEEEECCEETTTTGG--GTTC-TTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH----cCCCeEEEEcceeeccccc--cccc-cccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence 999999998864 3899999999998886321 1100 0000113344566778888999999999999999999
Q ss_pred hcCC-CCceEEEcC-CCcccHHHHHHHHHHHhCCCCC
Q 005949 240 HKGE-VGHVYNVGT-KKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 240 ~~~~-~~~~~ni~~-~~~~s~~el~~~i~~~~g~~~~ 274 (668)
+.+. .++.|++.+ ++.+|+.|+++.+.+.+|.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 8654 466777765 4689999999999999997643
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-23 Score=203.74 Aligned_cols=237 Identities=11% Similarity=0.129 Sum_probs=170.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKE-GIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~-g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
|||+|||||||||+++++.|++. |++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~~-- 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGM--DTVVFIPSII-- 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTC--SEEEECCCCC--
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCC--CEEEEeCCCC--
Confidence 68999999999999999999998 8754 34678999999999999976 9999999855
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
.. ...|+.++.+++++|++.+++ +|++|| |+... +.+ ..+...+..+|
T Consensus 77 -~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss---~~~~~-------------~~~----~~~~~~~~~~e 125 (289)
T 3e48_A 77 -HP----------SFKRIPEVENLVYAAKQSGVAHIIFIGY---YADQH-------------NNP----FHMSPYFGYAS 125 (289)
T ss_dssp -CS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEE---SCCST-------------TCC----STTHHHHHHHH
T ss_pred -cc----------chhhHHHHHHHHHHHHHcCCCEEEEEcc---cCCCC-------------CCC----CccchhHHHHH
Confidence 11 134899999999999999985 555565 22111 111 11222334556
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh-hHHHHhhcccceee-c---CCCcccHhhHHHHHHHHHhccC--CceeeecCCC
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRYNKVVN-I---PNSMTVLDELLPISIEMAKRNL--RGIWNFTNPG 596 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~-~~~~~~~~~~~~~~-~---~~~~~~v~D~a~~~~~~~~~~~--~g~~ni~~~~ 596 (668)
+.+.. .+++++++|++.++|+. .++..+...+.... . ..++++++|+|++++.++.++. +++||++ ++
T Consensus 126 ~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~ 200 (289)
T 3e48_A 126 RLLST----SGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GY 200 (289)
T ss_dssp HHHHH----HCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CE
T ss_pred HHHHH----cCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CC
Confidence 65543 58999999999999985 34444443332221 1 1269999999999999998763 6799999 99
Q ss_pred ccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhcc-CC--------------CCCccChhHHHhhcC-CccChHHHHHHH
Q 005949 597 VVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVA-PR--------------SNNEMDASKLKKEFP-ELLSIKDSLIKY 660 (668)
Q Consensus 597 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~--------------~~~~ld~~k~~~~~g-~~~~~~~~l~~~ 660 (668)
.+|+.|+++.+.+.+|.++.+..++..+....... .. .....+...+++++| +++++++-+++.
T Consensus 201 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~ 280 (289)
T 3e48_A 201 SYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFLQEN 280 (289)
T ss_dssp EEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCCHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCCHHHHHHHH
Confidence 99999999999999999988777776544322221 00 112345667788888 777877665543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-22 Score=215.69 Aligned_cols=458 Identities=14% Similarity=0.131 Sum_probs=264.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-------CCccccCCCcCCCCeEEEEccCCCHHHH----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-------SNLKNLIPSKASSNFKFVKGDIASADLV---- 72 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~d~~~~---- 72 (668)
+++|.+|||||++.||+++++.|+++ +.+|++.++.... ..++.........+.. ..+|+.|.+..
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v 82 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV 82 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH
Confidence 45689999999999999999999999 7889888764310 1111111110001111 23466665333
Q ss_pred HHHhcc-CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccc-cCCCCCC
Q 005949 73 NFLLIT-ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEV-YGETDED 142 (668)
Q Consensus 73 ~~~~~~-~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v-yg~~~~~ 142 (668)
+++.+. .++|++||+||.... ..+.+++...+++|+.|+..+.+++. +.+ -.++|++||... ++...
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~~-- 159 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFG-- 159 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT--
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCC--
Confidence 333322 479999999997532 23344566899999999998887664 223 369999999654 33221
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
...|+.+|.....+.+.++.+ +|+++..+.|+ +.. .+ ... ....
T Consensus 160 -------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T------~m----~~~---~~~~------ 206 (604)
T 2et6_A 160 -------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS------RM----TES---IMPP------ 206 (604)
T ss_dssp -------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC------HH----HHT---TSCH------
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC------cc----ccc---cCCh------
Confidence 346999999999999988765 48999999996 211 11 110 0000
Q ss_pred CceEeceeHHHHHHHHHHHHhcCC--CCceEEEcCCC------------------cccHHHHHHHHHHHhCCCCCcceEe
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGE--VGHVYNVGTKK------------------ERRVIDVAKDICKLFSMDPETSIKF 279 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~~------------------~~s~~el~~~i~~~~g~~~~~~~~~ 279 (668)
........+|++.+++.++.... .|+.+.+.+|. ..+..++...+.+...........+
T Consensus 207 -~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 285 (604)
T 2et6_A 207 -PMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYDDSRKPEY 285 (604)
T ss_dssp -HHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCCCTTSCGG
T ss_pred -hhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchhhcccccc
Confidence 00112478999999998886542 46677776552 2344555554444332221100000
Q ss_pred c-cCCCCCCcccccChHHHHhCCCcccCCHHHHHHHHHHHHhhCCCcccccCCCCCCCCcccccCCCCCCCCcccccccc
Q 005949 280 V-ENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVS 358 (668)
Q Consensus 280 ~-~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (668)
. ...|... .++.+ ..+..+..+.. +.
T Consensus 286 ~~~~~P~~~------------------~d~~~----l~~ka~~~~~~-----------~~-------------------- 312 (604)
T 2et6_A 286 LKNQYPFML------------------NDYAT----LTNEARKLPAN-----------DA-------------------- 312 (604)
T ss_dssp GSCBCCSSS------------------CCHHH----HHHHHTTSCCC-----------CC--------------------
T ss_pred ccccCcchH------------------HHHHH----HHHHHHhCCcc-----------cc--------------------
Confidence 0 0000000 01111 11111111100 00
Q ss_pred cccccccccccccccccCCCCCCCCcEEEEEcCCcchhHHHHHHHHHcCCccccc----------------------ccc
Q 005949 359 SVSTNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYG----------------------KGR 416 (668)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~----------------------~~D 416 (668)
.+ .....-..+.++||||++-||+.+++.|.++|++|.+. ..|
T Consensus 313 ----~~-----------~~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~D 377 (604)
T 2et6_A 313 ----SG-----------APTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHD 377 (604)
T ss_dssp ----TT-----------CCCCCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCC
T ss_pred ----cc-----------ccccccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcC
Confidence 00 00000112469999999999999999999999976322 234
Q ss_pred c-CChhH-HHHHhhhc-CCCEEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEeccee
Q 005949 417 L-EDCSS-LIADVQSV-KPTHVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCI 487 (668)
Q Consensus 417 ~-~d~~~-~~~~l~~~-~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~v 487 (668)
+ .+.+. ++++.+.+ ++|++||.||..... ..+...++....+++|+.|+.++.+++.. .+ .++|++||...
T Consensus 378 v~~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag 457 (604)
T 2et6_A 378 VAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457 (604)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 4 33222 22333332 689999999976211 11223445567889999999999988753 23 47888888654
Q ss_pred EeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeec
Q 005949 488 FEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNI 564 (668)
Q Consensus 488 y~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~ 564 (668)
+.+ .+....|+.||.....+.+.+. ..+++++..+.|+ +.-+ +....... .
T Consensus 458 ~~~------------------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG-~~T~--m~~~~~~~-~---- 511 (604)
T 2et6_A 458 IYG------------------NFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH-AETA--MTLSIMRE-Q---- 511 (604)
T ss_dssp HSC------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCC--C-------------
T ss_pred ccC------------------CCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC-CCCc--cccccCch-h----
Confidence 311 1223579999999998877753 2368999999986 3221 21111100 0
Q ss_pred CCCcccHhhHHHHHHHHHhcc---CCceeeecCC
Q 005949 565 PNSMTVLDELLPISIEMAKRN---LRGIWNFTNP 595 (668)
Q Consensus 565 ~~~~~~v~D~a~~~~~~~~~~---~~g~~ni~~~ 595 (668)
.......+|+|.++++++... .+.++.+.+|
T Consensus 512 ~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG 545 (604)
T 2et6_A 512 DKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGG 545 (604)
T ss_dssp -CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred hccCCCHHHHHHHHHHHhCCccCCCCcEEEECCC
Confidence 112345789999999888542 3456666654
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-23 Score=199.94 Aligned_cols=224 Identities=17% Similarity=0.099 Sum_probs=164.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SI 81 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~ 81 (668)
.|++|+||||||+|+||++++++|+++ +++|++++|... ....+... ..+++++.+|++|.+.+.+++... ++
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNS--DLVSLAKE--CPGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHh--ccCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 456789999999999999999999999 688999988642 11111111 135678899999999999998643 58
Q ss_pred CEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 82 DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 82 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
|+|||+||..... ...+++...+++|+.++.++++++... +..++||++||...|....
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 144 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP------------- 144 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC-------------
Confidence 9999999975422 223345678899999999999877653 2247999999988876532
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
+...|+.+|...|.+++.++.+ .+++++++||+.++|+........+.+...+..+. ..+.+++++|
T Consensus 145 -~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d 214 (244)
T 1cyd_A 145 -NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH---------PLRKFAEVED 214 (244)
T ss_dssp -TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS---------TTSSCBCHHH
T ss_pred -CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcC---------CccCCCCHHH
Confidence 2357999999999999998766 48999999999999975311001122323332222 2246899999
Q ss_pred HHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 231 VAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 231 ~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
+|++++.+++.+. .|+.+++.+|..
T Consensus 215 va~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 215 VVNSILFLLSDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp HHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred HHHHHHHHhCchhhcccCCEEEECCCcc
Confidence 9999999987542 477888887754
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-24 Score=207.18 Aligned_cols=211 Identities=9% Similarity=0.058 Sum_probs=155.7
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHc--CCcc-----------------cccccccCChhHHHHHhhhcCCCEEEEccccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKE--GIPF-----------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~--g~~v-----------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
+||+|+||||+||||++++++|+++ |++| .++.+|++|++++.++++++ |+|||+||..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vi~~a~~~ 80 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI--DALVILTSAV 80 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC--SEEEECCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCC--CEEEEecccc
Confidence 3579999999999999999999999 7754 34568999999999999865 9999999965
Q ss_pred CCCC---cccccccc-------ccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 443 GRPN---VDWCESHK-------TDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 443 ~~~~---~~~~~~~~-------~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
.... ...+..++ ...+++|+.++.+++++|++.++ ++|++||..++.. ..+..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~---------------~~~~~~ 145 (253)
T 1xq6_A 81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP---------------DHPLNK 145 (253)
T ss_dssp CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT---------------TCGGGG
T ss_pred ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC---------------CCcccc
Confidence 1000 00111222 23568999999999999999987 6788888765411 011111
Q ss_pred --CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhccc--ceeecCCCcccHhhHHHHHHHHHhcc--
Q 005949 512 --GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYN--KVVNIPNSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 512 --~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~v~D~a~~~~~~~~~~-- 585 (668)
.+.|+.+|..+|++++. .+++++++||+.++|+......+..+. ........+++++|+|++++.+++++
T Consensus 146 ~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~ 221 (253)
T 1xq6_A 146 LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEA 221 (253)
T ss_dssp GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCccc
Confidence 14577899999999875 579999999999999853211111111 11111236899999999999999875
Q ss_pred CCceeeecCCC---ccCHHHHHHHHHhhcCC
Q 005949 586 LRGIWNFTNPG---VVSHNEILEMYKKYINP 613 (668)
Q Consensus 586 ~~g~~ni~~~~---~~s~~e~~~~i~~~~g~ 613 (668)
.+++||+++++ .+|+.|+++.+++.+|+
T Consensus 222 ~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp TTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 36699999964 59999999999999885
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-24 Score=207.21 Aligned_cols=193 Identities=15% Similarity=0.172 Sum_probs=146.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
.|+|+|||||||||++++++|+++|++| .++.+|++ +++.+.+.+ +|+|||+||..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~--~D~vi~~ag~~- 95 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFAS--IDAVVFAAGSG- 95 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTT--CSEEEECCCCC-
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcC--CCEEEECCCCC-
Confidence 4799999999999999999999999864 34556666 455556664 59999999966
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
...++...+++|+.++.+++++|++.++ ++|++||...+ ..+..+ .+.+.|+.+|..+
T Consensus 96 ------~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~--------------~~~~~~-~~~~~Y~~sK~~~ 154 (236)
T 3e8x_A 96 ------PHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV--------------DPDQGP-MNMRHYLVAKRLA 154 (236)
T ss_dssp ------TTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS--------------CGGGSC-GGGHHHHHHHHHH
T ss_pred ------CCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC--------------CCCCCh-hhhhhHHHHHHHH
Confidence 2356778899999999999999999987 56666773322 111112 4557899999999
Q ss_pred HHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccCH
Q 005949 523 EELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSH 600 (668)
Q Consensus 523 E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~ 600 (668)
|++++. .+++++++||+.++|+... .............++++++|+|++++.+++++ .+++||++++ .+++
T Consensus 155 e~~~~~----~gi~~~~lrpg~v~~~~~~--~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~ 227 (236)
T 3e8x_A 155 DDELKR----SSLDYTIVRPGPLSNEEST--GKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPI 227 (236)
T ss_dssp HHHHHH----SSSEEEEEEECSEECSCCC--SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEH
T ss_pred HHHHHH----CCCCEEEEeCCcccCCCCC--CeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCH
Confidence 999873 6899999999999998520 00000001112358999999999999999876 5679999997 5999
Q ss_pred HHHHHHHH
Q 005949 601 NEILEMYK 608 (668)
Q Consensus 601 ~e~~~~i~ 608 (668)
.|+++.++
T Consensus 228 ~e~~~~i~ 235 (236)
T 3e8x_A 228 AKVVEQLG 235 (236)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHhc
Confidence 99998764
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-24 Score=203.95 Aligned_cols=198 Identities=13% Similarity=0.057 Sum_probs=142.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|||+|||||||||+++++.|+++|++| .++.+|++|+++ +.+.++ |+|||+||..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi~~ag~~--- 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSV--DAVVDALSVP--- 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTC--SEEEECCCCC---
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccC--CEEEECCccC---
Confidence 689999999999999999999999864 456778888877 667665 9999999954
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
+ .....+.|+.++.+++++|++.+.++|++||+.+++...... ....+++....|.+.|+.+|..+|.+
T Consensus 74 ---~----~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~sK~~~e~~ 142 (224)
T 3h2s_A 74 ---W----GSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADH----PMILDFPESAASQPWYDGALYQYYEY 142 (224)
T ss_dssp ---T----TSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSS----CGGGGCCGGGGGSTTHHHHHHHHHHH
T ss_pred ---C----CcchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCc----cccccCCCCCccchhhHHHHHHHHHH
Confidence 1 112356899999999999999997888888876554433211 01233333334468999999999965
Q ss_pred HHhccCeeEeEEeeeecCCCCChhhHHHHhhcccce---eecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccCH
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKV---VNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSH 600 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~ 600 (668)
..+.+..+++++++||+.+||+..... ....... .....++++++|+|++++.+++++ .+++||+++.+..+.
T Consensus 143 -~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~ 220 (224)
T 3h2s_A 143 -QFLQMNANVNWIGISPSEAFPSGPATS-YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEHH 220 (224)
T ss_dssp -HHHTTCTTSCEEEEEECSBCCCCCCCC-EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC----
T ss_pred -HHHHhcCCCcEEEEcCccccCCCcccC-ceecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchhc
Confidence 344445789999999999999853221 1111111 122347999999999999999876 578999999776554
Q ss_pred H
Q 005949 601 N 601 (668)
Q Consensus 601 ~ 601 (668)
.
T Consensus 221 ~ 221 (224)
T 3h2s_A 221 H 221 (224)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-23 Score=205.51 Aligned_cols=229 Identities=17% Similarity=0.062 Sum_probs=163.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC--CCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE--SIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 83 (668)
||+||||||+|+||+++++.|+++ +++|++++|.... .. . .+.+|+.|.+.+.+++... ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~--~~--------~---~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQAD--IE--------A---DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS--EE--------C---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhH--cc--------c---cccCCcccHHHHHHHHHHcCCCccE
Confidence 368999999999999999999998 6889999886421 10 0 1578999999998887533 8999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCC-----CCCCC----
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVG-----NHEAS---- 151 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~-----~~e~~---- 151 (668)
|||+||.... ..++...+++|+.++.++++++... ...+++|++||..+|+......... .+|..
T Consensus 66 vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
T 2dkn_A 66 LVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIEL 142 (255)
T ss_dssp EEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhh
Confidence 9999997542 3567789999999999999987754 2258999999999987652111000 00000
Q ss_pred ---CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 152 ---QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 152 ---~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
...+...|+.+|.++|.+++.++.+ .+++++++||+.++|+.. ..+......+....... + ..+.+
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~------~~~~~~~~~~~~~~~~~-~-~~~~~ 214 (255)
T 2dkn_A 143 AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL------QASKADPRYGESTRRFV-A-PLGRG 214 (255)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH------HHHHHCTTTHHHHHSCC-C-TTSSC
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh------hhcccchhhHHHHHHHH-H-HhcCC
Confidence 0124567999999999999987765 589999999999999743 11100000000000000 1 34478
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHH
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVID 260 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~e 260 (668)
++++|+|++++.+++.+ ..++.|+++++...++.|
T Consensus 215 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 215 SEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred CCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 99999999999999765 357899999988776654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=200.74 Aligned_cols=241 Identities=17% Similarity=0.145 Sum_probs=175.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDH--GQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhH--HHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6789998885321 1111111 1112689999999999998888742
Q ss_pred -CCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ...+++|++||..+|....
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------- 161 (278)
T 2bgk_A 90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE-------- 161 (278)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT--------
T ss_pred cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC--------
Confidence 379999999997532 1122345678999999999999888653 1257999999998876532
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
.+...|+.+|...|.+++.++.+ .+++++++|||.++|+..... ..............+ .....
T Consensus 162 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 229 (278)
T 2bgk_A 162 -----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGT 229 (278)
T ss_dssp -----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSC
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccc
Confidence 12457999999999999998765 489999999999999975321 111122222221111 11235
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHHHHHHHH
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVIDVAKDICKL 268 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~el~~~i~~~ 268 (668)
+++++|+|++++.++... ..|+.|++.+|...++.|+++.+.+.
T Consensus 230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 230 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred cCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence 789999999999988643 35789999999999999999887653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=198.40 Aligned_cols=226 Identities=15% Similarity=0.133 Sum_probs=166.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|++|++.+.+++..
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADA--ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6889999886421 1111110 1134688999999999998888742
Q ss_pred --CCCCEEEEcCccCCc---ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+ .++||++||...+.+..
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------- 154 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI--------- 154 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT---------
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC---------
Confidence 279999999997543 22334456788999999999998875 334 68999999988765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|...|.+++.++.+. ++++.++|||.++++.... ...+.+......+.++ ..++
T Consensus 155 -----~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~---------~~~~ 219 (255)
T 1fmc_A 155 -----NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPI---------RRLG 219 (255)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCCHHHHHHHHHTCSS---------CSCB
T ss_pred -----CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh-ccChHHHHHHHhcCCc---------ccCC
Confidence 34579999999999999987654 8999999999999875321 1123333333333221 2467
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKKERRV 258 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~ 258 (668)
+++|+|++++.++..+ ..+++|++++|...|+
T Consensus 220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred CHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 9999999999988653 2478999999887664
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-23 Score=202.53 Aligned_cols=234 Identities=17% Similarity=0.108 Sum_probs=166.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
..+++|+||||||+|+||++++++|+++ +++|++.+|... ........ ...++.++.+|++|.+.+.+++..
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIE--RARQAAAE-IGPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4456789999999999999999999999 688999888532 11111111 134678999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... .+.+++...+++|+.++.++++++... +...++|++||...+.+..
T Consensus 79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 150 (259)
T 4e6p_A 79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA-------- 150 (259)
T ss_dssp HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC--------
Confidence 2799999999975432 233455678899999999999887542 2136999999987764432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC---CCceeecCCCce
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG---LPLPIHGDGSNV 222 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 222 (668)
+...|+.+|...|.+.+.++.++ ++++.+++||.|++|... ....+....... .......+....
T Consensus 151 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~ 221 (259)
T 4e6p_A 151 ------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD---GVDALFARYENRPRGEKKRLVGEAVPF 221 (259)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH---HHHHHHHHHHTCCTTHHHHHHHHHSTT
T ss_pred ------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh---hhhhhhhhhccCChHHHHHHHhccCCC
Confidence 24569999999999999988654 899999999999998541 111112211111 111111222344
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
+.+.+++|+|++++.++... ..|+.|++.+|..+|
T Consensus 222 ~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 222 GRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp SSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 56889999999999887643 247899999887553
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.5e-22 Score=192.48 Aligned_cols=215 Identities=17% Similarity=0.162 Sum_probs=162.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... ....++.++.+|++|++++.++++.
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~---------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKP---------SADPDIHTVAGDISKPETADRIVREGIERF 94 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCC---------CSSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhh---------cccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence 45789999999999999999999999 7899999886421 1123689999999999998887743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... .+.+++...+++|+.|+.++++++ ++.+ ..++|++||...+....
T Consensus 95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 163 (260)
T 3un1_A 95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMV---------- 163 (260)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCC----------
Confidence 2799999999976432 233445678899999999999877 3434 68999999987754322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
..+...|+.+|...+.+.+.++.++ |+++.+++||.|.+|.... .. ........ ....+.+
T Consensus 164 --~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~----~~~~~~~~---------p~~r~~~ 227 (260)
T 3un1_A 164 --GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-ET----HSTLAGLH---------PVGRMGE 227 (260)
T ss_dssp --TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-GG----HHHHHTTS---------TTSSCBC
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-HH----HHHHhccC---------CCCCCcC
Confidence 2235679999999999999998876 8999999999999986532 11 11112221 2234678
Q ss_pred HHHHHHHHHHHHhcCC-CCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKGE-VGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~ 256 (668)
++|+|++++.+.+... .|+.|++.+|...
T Consensus 228 ~~dva~av~~L~~~~~itG~~i~vdGG~~~ 257 (260)
T 3un1_A 228 IRDVVDAVLYLEHAGFITGEILHVDGGQNA 257 (260)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence 9999999998855443 5789999988654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=197.63 Aligned_cols=240 Identities=16% Similarity=0.120 Sum_probs=160.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC-----CcCCCCeEEEEccCCCHHHHHHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP-----SKASSNFKFVKGDIASADLVNFL 75 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~ 75 (668)
|..|++|+||||||+|+||+++++.|+++ +++|++++|... .+..... .....++.++.+|++|.+.+.++
T Consensus 1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (278)
T 1spx_A 1 MTRFAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI 76 (278)
T ss_dssp -CTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHH
Confidence 77778899999999999999999999999 688999888632 1111100 11123588999999999998887
Q ss_pred hcc-----CCCCEEEEcCccCCcc----c----ccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccc-cC
Q 005949 76 LIT-----ESIDTIMHFAAQTHVD----N----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEV-YG 137 (668)
Q Consensus 76 ~~~-----~~~d~Vih~a~~~~~~----~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~v-yg 137 (668)
+.. .++|+|||+||..... . ..+++...+++|+.++.++++++... + +++|++||... +.
T Consensus 77 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~ 154 (278)
T 1spx_A 77 LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLH 154 (278)
T ss_dssp HHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSS
T ss_pred HHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEeccccccc
Confidence 742 2799999999975421 1 33455678999999999999887653 3 79999999876 54
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCCh-HHHH------HHHH
Q 005949 138 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKL-IPKF------ILLA 207 (668)
Q Consensus 138 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~-~~~~------~~~~ 207 (668)
+.. +...|+.+|...+.+.+.++.+ +++++++++||.|.++....... .... ....
T Consensus 155 ~~~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~ 220 (278)
T 1spx_A 155 ATP--------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATM 220 (278)
T ss_dssp CCT--------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHH
T ss_pred CCC--------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHH
Confidence 321 2446999999999999987754 48999999999999986421100 0000 1111
Q ss_pred HcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC----CCCceEEEcCCCcccHHHHHHHHHHHh
Q 005949 208 MRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG----EVGHVYNVGTKKERRVIDVAKDICKLF 269 (668)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~~~s~~el~~~i~~~~ 269 (668)
....+ ...+++++|+|++++.++..+ ..|+.|++.+|...++.|+++.+.+.+
T Consensus 221 ~~~~p---------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 221 KECVP---------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHCT---------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred HhcCC---------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 11111 124789999999999888642 458899999999999999999887653
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=187.09 Aligned_cols=203 Identities=18% Similarity=0.188 Sum_probs=139.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|+||+||||||+|+||+++++.|+++| .++|++++|.... ... ....+++++.+|+.|.+.+.+++ .++|+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~R~~~~--~~~----~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~ 91 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQ-TIKQTLFARQPAK--IHK----PYPTNSQIIMGDVLNHAALKQAM--QGQDI 91 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEESSGGG--SCS----SCCTTEEEEECCTTCHHHHHHHH--TTCSE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEEcChhh--hcc----cccCCcEEEEecCCCHHHHHHHh--cCCCE
Confidence 557899999999999999999999983 2899999886432 111 12347899999999999999999 68999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||+|+.... ...+.++++++++.+ +++||++||..+|+....... ...+..... +...+
T Consensus 92 vv~~a~~~~~--------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~-~~~~~~~~~----~~~~~ 151 (236)
T 3qvo_A 92 VYANLTGEDL--------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFV-EWNNAVIGE----PLKPF 151 (236)
T ss_dssp EEEECCSTTH--------------HHHHHHHHHHHHHTT-CCEEEEECCCCC-----------------CG----GGHHH
T ss_pred EEEcCCCCch--------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccc-cchhhcccc----hHHHH
Confidence 9999985321 134678999999877 899999999999987643221 112222222 22333
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc-eEeceeHHHHHHHHHHHHhcC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN-VRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~ai~~~~~~~ 242 (668)
..+|..+ ++.+++++++|||.++++.... ......+.. ...+++++|+|++++.++..+
T Consensus 152 ~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~----------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~ 211 (236)
T 3qvo_A 152 RRAADAI----EASGLEYTILRPAWLTDEDIID----------------YELTSRNEPFKGTIVSRKSVAALITDIIDKP 211 (236)
T ss_dssp HHHHHHH----HTSCSEEEEEEECEEECCSCCC----------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHST
T ss_pred HHHHHHH----HHCCCCEEEEeCCcccCCCCcc----------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCc
Confidence 4445544 3458999999999999875421 111111111 235899999999999999876
Q ss_pred C--CCceEEEcCCCc
Q 005949 243 E--VGHVYNVGTKKE 255 (668)
Q Consensus 243 ~--~~~~~ni~~~~~ 255 (668)
. .++.|+++++..
T Consensus 212 ~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 212 EKHIGENIGINQPGT 226 (236)
T ss_dssp TTTTTEEEEEECSSC
T ss_pred ccccCeeEEecCCCC
Confidence 6 688999998753
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-23 Score=200.09 Aligned_cols=187 Identities=14% Similarity=0.075 Sum_probs=144.7
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCC--ccc--------------ccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGI--PFE--------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~--~v~--------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|+|+|+||||+||||++++++|+++|+ +|. ++.+|++|++++.+++ +|+|||+||..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~----~d~vi~~a~~~--- 76 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS----IDTAFCCLGTT--- 76 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC----CSEEEECCCCC---
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh----hcEEEECeeec---
Confidence 457999999999999999999999998 553 4456777776666555 69999999965
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
. ....++...+++|+.++.+++++|++.++ +++++||..+|+ .+.+.|+.+|..+|+
T Consensus 77 ~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--------------------~~~~~y~~sK~~~e~ 134 (215)
T 2a35_A 77 I--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------------KSSIFYNRVKGELEQ 134 (215)
T ss_dssp H--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHHHH
T ss_pred c--ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--------------------CCccHHHHHHHHHHH
Confidence 1 12456777889999999999999999988 578888877762 123689999999999
Q ss_pred HHHhccCeeEeE-EeeeecCCCCChhh---HHHHhhcccce-eecCCCcccHhhHHHHHHHHHhccCCceeeecCCCccC
Q 005949 525 LLKEYDNVCTLR-VRMPISSDLNNPRN---FITKISRYNKV-VNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVS 599 (668)
Q Consensus 525 ~~~~~~~~~~l~-~~~~r~~~~~g~~~---~~~~~~~~~~~-~~~~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s 599 (668)
+++.+ +++ ++++||+.+|||.. ++..+...... .....+++|++|+|++++.+++++.+|+||+++++.++
T Consensus 135 ~~~~~----~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~~~~i~~~~~~~ 210 (215)
T 2a35_A 135 ALQEQ----GWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVESDELRK 210 (215)
T ss_dssp HHTTS----CCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEEEEHHHHHH
T ss_pred HHHHc----CCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCCCCceEEcHHHHHH
Confidence 99763 788 99999999999863 33333311111 11123789999999999999998888999999877665
Q ss_pred HH
Q 005949 600 HN 601 (668)
Q Consensus 600 ~~ 601 (668)
+.
T Consensus 211 ~~ 212 (215)
T 2a35_A 211 LG 212 (215)
T ss_dssp HH
T ss_pred hh
Confidence 53
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=201.55 Aligned_cols=247 Identities=15% Similarity=0.130 Sum_probs=175.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC-Ccc--------------------cccccccCChhHHHHHhhhcCCCEEEEcccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG-IPF--------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g-~~v--------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
+|+|+||||||+||+++++.|+++| ++| .++.+|++|++++.++++++ |+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGA--YATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcC--CEEEEeCCC
Confidence 4789999999999999999999998 754 34567899999999999976 999999984
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecc-eeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATG-CIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
. . . ...+.|+.++.+++++|++.+++.++++|+ .+|+.. + . .+.+.|+.+|.
T Consensus 83 ~---~----~----~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~------------~-~---~~~~~y~~sK~ 135 (299)
T 2wm3_A 83 W---E----S----CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT------------A-G---RLAAAHFDGKG 135 (299)
T ss_dssp H---H----H----TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT------------T-T---SCCCHHHHHHH
T ss_pred C---c----c----ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC------------C-C---cccCchhhHHH
Confidence 4 1 0 023467889999999999999854444444 444321 0 1 12368999999
Q ss_pred HHHHHHHhccCeeEeEEeeeecCCCCChhh--HHHHhhcccc--eeec-----CCCcccHhhHHHHHHHHHhcc---CCc
Q 005949 521 MVEELLKEYDNVCTLRVRMPISSDLNNPRN--FITKISRYNK--VVNI-----PNSMTVLDELLPISIEMAKRN---LRG 588 (668)
Q Consensus 521 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~--~~~~-----~~~~~~v~D~a~~~~~~~~~~---~~g 588 (668)
.+|++++. .+++++++|++.+||+.. ++......+. .... ..++++++|+|+++..++.++ .++
T Consensus 136 ~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~ 211 (299)
T 2wm3_A 136 EVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQ 211 (299)
T ss_dssp HHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTC
T ss_pred HHHHHHHH----CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCe
Confidence 99999976 478999999999998742 2221122221 1111 227899999999999999864 467
Q ss_pred eeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhh-c----------cCCCCCccChhHHHhhcC-CccChHHH
Q 005949 589 IWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVI-V----------APRSNNEMDASKLKKEFP-ELLSIKDS 656 (668)
Q Consensus 589 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-~----------~~~~~~~ld~~k~~~~~g-~~~~~~~~ 656 (668)
+||+++ +.+|+.|+++.+.+.+|.++.+..++..+..... + ....+...+. ...+.+| ++++|++-
T Consensus 212 ~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~ 289 (299)
T 2wm3_A 212 NIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDI-ELTLRLNPKALTLDQW 289 (299)
T ss_dssp EEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCCH-HHHHHHCTTCCCHHHH
T ss_pred EEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCCH-HHHHHhCCCCCCHHHH
Confidence 999986 6899999999999999998877666654322100 0 0001111122 3445567 77899998
Q ss_pred HHHHHhcc
Q 005949 657 LIKYVFEP 664 (668)
Q Consensus 657 l~~~~~~~ 664 (668)
+++....+
T Consensus 290 ~~~~~~~~ 297 (299)
T 2wm3_A 290 LEQHKGDF 297 (299)
T ss_dssp HHHHGGGC
T ss_pred HHhChhhc
Confidence 88875543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-21 Score=184.33 Aligned_cols=204 Identities=17% Similarity=0.152 Sum_probs=148.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHH-HhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLI-RNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~-~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
.+||++||||||+|+||+++++.|+ ++ +++|++++|.... .+..+. ....+++++.+|+.|.+.+.+++ .++
T Consensus 2 ~~mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~-~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~--~~~ 74 (221)
T 3r6d_A 2 NAMYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKT-RIPPEI--IDHERVTVIEGSFQNPGXLEQAV--TNA 74 (221)
T ss_dssp CCSCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHH-HSCHHH--HTSTTEEEEECCTTCHHHHHHHH--TTC
T ss_pred CceEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccc-cchhhc--cCCCceEEEECCCCCHHHHHHHH--cCC
Confidence 3455679999999999999999999 77 6899999886420 111110 02457899999999999999999 689
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCC-hhH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN-PYS 160 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~-~Y~ 160 (668)
|+|||+||.. |+. ++++++++++.+ +++||++||..+|+....... +.. ..... .|+
T Consensus 75 d~vv~~ag~~---------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~----~~~-~~~~~~~y~ 132 (221)
T 3r6d_A 75 EVVFVGAMES---------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALE----KWT-FDNLPISYV 132 (221)
T ss_dssp SEEEESCCCC---------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHH----HHH-HHTSCHHHH
T ss_pred CEEEEcCCCC---------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccc----ccc-ccccccHHH
Confidence 9999999853 444 899999999876 889999999999876432110 000 01123 799
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc-eEeceeHHHHHHHHHHHH
Q 005949 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN-VRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 161 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~ai~~~~ 239 (668)
.+|..+|.+++. .+++++++|||.++++.... .......+.. ...+++.+|+|++++.++
T Consensus 133 ~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~---------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 193 (221)
T 3r6d_A 133 QGERQARNVLRE----SNLNYTILRLTWLYNDPEXT---------------DYELIPEGAQFNDAQVSREAVVKAIFDIL 193 (221)
T ss_dssp HHHHHHHHHHHH----SCSEEEEEEECEEECCTTCC---------------CCEEECTTSCCCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----CCCCEEEEechhhcCCCCCc---------------ceeeccCCccCCCceeeHHHHHHHHHHHH
Confidence 999999998863 48999999999999983311 1111111111 224899999999999999
Q ss_pred --hcCC--CCceEEEcCCC
Q 005949 240 --HKGE--VGHVYNVGTKK 254 (668)
Q Consensus 240 --~~~~--~~~~~ni~~~~ 254 (668)
..+. .++.+.+.++.
T Consensus 194 ~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 194 HAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp TCSCCGGGTTEEEEEECTT
T ss_pred HhcChhhhhcceeeecCCC
Confidence 6654 46677777543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=201.73 Aligned_cols=238 Identities=15% Similarity=0.118 Sum_probs=170.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc---CCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK---ASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ........ ...++.++.+|++|.+.+.+++..
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDV--LKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 6889999886421 11110000 034689999999999998887743
Q ss_pred ---CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ....++|++||...+.+.
T Consensus 100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 171 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-------- 171 (302)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC--------
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC--------
Confidence 268999999996542 2233456678999999999998877532 235799999998765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCCceeecCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
.+...|+.+|.+.|.+++.++.+ ++++++++|||.+++++... .... .......+.+
T Consensus 172 ------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~p--------- 234 (302)
T 1w6u_A 172 ------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKEMIGRIP--------- 234 (302)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHHHHTTCT---------
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHHHHhcCC---------
Confidence 13457999999999999998776 68999999999999984311 1111 1112222221
Q ss_pred eEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccHHHHHHHHHHHhC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERRVIDVAKDICKLFS 270 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~~el~~~i~~~~g 270 (668)
...+++++|+|++++.++.... .|+.|++.+|...++.++++.+.+..|
T Consensus 235 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 235 CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 1246789999999998886432 578999999988888888776655443
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=189.84 Aligned_cols=223 Identities=15% Similarity=0.106 Sum_probs=161.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 82 (668)
+++++||||||+|+||+++++.|+++ +++|++++|... .++.+... ..+++++.+|++|.+.+.+++... ++|
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id 78 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQA--DLDSLVRE--CPGIEPVCVDLGDWEATERALGSVGPVD 78 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH--cCCCCEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45689999999999999999999999 678999888532 11111111 125677899999999999998643 689
Q ss_pred EEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|||+||..... ...+++...+++|+.++.++++++... +..+++|++||...+....
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 144 (244)
T 3d3w_A 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-------------- 144 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred EEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC--------------
Confidence 999999975432 123345678999999999998877653 2247999999987765422
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+...|+.+|...|.+++.++.+ .+++++++|||.|+++........+.......... ....+++++|+
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dv 215 (244)
T 3d3w_A 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---------PLGKFAEVEHV 215 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC---------TTCSCBCHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC---------CCCCCcCHHHH
Confidence 2457999999999999998765 48999999999999985310000001111111211 12357899999
Q ss_pred HHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 232 AEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 232 a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
|++++.++... ..|+.|++.+|..
T Consensus 216 a~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 216 VNAILFLLSDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHcCccccCCCCCEEEECCCcc
Confidence 99999998753 2577999998754
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-22 Score=187.38 Aligned_cols=192 Identities=16% Similarity=0.103 Sum_probs=148.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCCEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SIDTI 84 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~V 84 (668)
+|+||||||+|+||++++++|+ + +++|++++|... .+.+|+.|.+.+.++++.. ++|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 3589999999999999999999 8 789999988531 4689999999998888542 68999
Q ss_pred EEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChh
Q 005949 85 MHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 159 (668)
Q Consensus 85 ih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 159 (668)
||+||...... ..+++...+++|+.++.++++++...- ..++||++||...+.+. .+...|
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~--------------~~~~~Y 128 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI--------------VQGASA 128 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC--------------TTCHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC--------------CccHHH
Confidence 99999754222 223345677899999999999998751 01699999998765432 234579
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~ 237 (668)
+.+|...|.+++.++.+. +++++++||+.++++.. . . .+....+.+++++|+|++++.
T Consensus 129 ~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~-------~----~---------~~~~~~~~~~~~~dva~~~~~ 188 (202)
T 3d7l_A 129 AMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD-------K----L---------EPFFEGFLPVPAAKVARAFEK 188 (202)
T ss_dssp HHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH-------H----H---------GGGSTTCCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh-------h----h---------hhhccccCCCCHHHHHHHHHH
Confidence 999999999999988654 89999999999998742 0 0 111234578999999999998
Q ss_pred HHhcCCCCceEEEc
Q 005949 238 ILHKGEVGHVYNVG 251 (668)
Q Consensus 238 ~~~~~~~~~~~ni~ 251 (668)
+++....|++||+.
T Consensus 189 ~~~~~~~G~~~~vd 202 (202)
T 3d7l_A 189 SVFGAQTGESYQVY 202 (202)
T ss_dssp HHHSCCCSCEEEEC
T ss_pred hhhccccCceEecC
Confidence 88766667788873
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=198.97 Aligned_cols=245 Identities=16% Similarity=0.131 Sum_probs=175.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|...... ...+.... ...++.++.+|++|.+.+.++++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999 688999988642110 11111110 112688999999999998887743
Q ss_pred ---CCCCEEEEcCccCC-----cccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||... .....+++...+++|+.++.++++++... ..-.++|++||...+....
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 159 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR------- 159 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC-------
Confidence 37999999999732 12233445678999999999999877643 1235999999988765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++...................+ ...
T Consensus 160 -------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~r 223 (281)
T 3svt_A 160 -------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP---------LPR 223 (281)
T ss_dssp -------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS---------SSS
T ss_pred -------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC---------CCC
Confidence 24579999999999999987664 69999999999998753110000111222222111 124
Q ss_pred ceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc-HHHHHHHHHHHhCCCC
Q 005949 225 YLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR-VIDVAKDICKLFSMDP 273 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s-~~el~~~i~~~~g~~~ 273 (668)
+.+++|+|++++.++.... .|+.|++.+|...+ ..++.+.+.+.+|.+.
T Consensus 224 ~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 224 QGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred CCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 5689999999999886532 58899999888776 7788888888888653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=191.49 Aligned_cols=198 Identities=17% Similarity=0.138 Sum_probs=149.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-CCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-ESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~Vi 85 (668)
|+||||||+|+||++++++|+++ +|++++|... ....+..... . +++.+|++|.+.+.+++.. .++|+||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~--~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~id~vi 71 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAG--ALAELAREVG--A-RALPADLADELEAKALLEEAGPLDLLV 71 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHH--HHHHHHHHHT--C-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHH--HHHHHHHhcc--C-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999986 8999988532 1111111111 1 7889999999999988842 3799999
Q ss_pred EcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 86 HFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 86 h~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
|+||..... ...+++...+++|+.++.++++++++.+ .++||++||..+|.+. .+...|+.
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~--------------~~~~~Y~~ 136 (207)
T 2yut_A 72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV--------------PGFAAYAA 136 (207)
T ss_dssp ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS--------------TTBHHHHH
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC--------------CCcchHHH
Confidence 999975432 2345667899999999999999997654 7899999998887443 23457999
Q ss_pred HHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHH
Q 005949 162 TKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECI 238 (668)
Q Consensus 162 sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~ 238 (668)
+|...|.+++.++.+ .+++++++|||.++++... +.+...+.+++++|+|++++.+
T Consensus 137 sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------------~~~~~~~~~~~~~dva~~~~~~ 195 (207)
T 2yut_A 137 AKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------------PLGGPPKGALSPEEAARKVLEG 195 (207)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------------GGTSCCTTCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------------ccCCCCCCCCCHHHHHHHHHHH
Confidence 999999999998766 5899999999999987410 1112335789999999999999
Q ss_pred HhcCCCCceEE
Q 005949 239 LHKGEVGHVYN 249 (668)
Q Consensus 239 ~~~~~~~~~~n 249 (668)
++.+..+.+++
T Consensus 196 ~~~~~~~~~~~ 206 (207)
T 2yut_A 196 LFREPVPALLE 206 (207)
T ss_dssp HC--CCCSCCC
T ss_pred HhCCCCccccc
Confidence 98876655543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=190.36 Aligned_cols=225 Identities=13% Similarity=0.109 Sum_probs=161.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... ...+.. .....++.++.+|++|.+.+.++++.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAM--ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 6889999886421 111100 01134689999999999998887742
Q ss_pred --CCCCEEEEcCccCC-c----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 --ESIDTIMHFAAQTH-V----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 --~~~d~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||... . ....+++...+++|+.++.++++++.. .+ ..++|++||...+....
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------- 158 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNR------- 158 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCC-------
Confidence 37999999999754 1 112233467889999999999988764 23 57999999987654321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
..+...|+.+|...|.+++.++.+ ++++++++|||.|+++........+.+......+.+ ...
T Consensus 159 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~ 224 (260)
T 3awd_A 159 -----PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP---------MGR 224 (260)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT---------TSS
T ss_pred -----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC---------cCC
Confidence 113367999999999999998776 689999999999999865200001223333333222 124
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+++++|+|++++.++... ..++.|++.+|.
T Consensus 225 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 225 VGQPDEVASVVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence 789999999999888643 257799999775
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-22 Score=195.96 Aligned_cols=240 Identities=18% Similarity=0.165 Sum_probs=166.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC----------ccccCC--CcCCCCeEEEEccCCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN----------LKNLIP--SKASSNFKFVKGDIAS 68 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----------~~~~~~--~~~~~~~~~~~~Dl~d 68 (668)
|..+++|++|||||+|+||++++++|+++ +++|++.+|...... +..... .....++.++.+|++|
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 82 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD 82 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 55567899999999999999999999999 688999988632110 000000 1123578899999999
Q ss_pred HHHHHHHhcc-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccc
Q 005949 69 ADLVNFLLIT-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEV 135 (668)
Q Consensus 69 ~~~~~~~~~~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v 135 (668)
.+.+.++++. .++|+|||+||.... ..+.+++...+++|+.++.++++++. +.+ ..++|++||...
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~ 161 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLG 161 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhh
Confidence 9998887743 379999999997652 22344556788999999999998863 333 579999999877
Q ss_pred cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCC
Q 005949 136 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLP 212 (668)
Q Consensus 136 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 212 (668)
+.... +...|+.+|...+.+.+.++.+ +++++.+++||.|++|..........+.........
T Consensus 162 ~~~~~--------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~ 227 (281)
T 3s55_A 162 HSANF--------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTL 227 (281)
T ss_dssp GSCCT--------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCH
T ss_pred cCCCC--------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccch
Confidence 64432 2457999999999999998875 489999999999999875321000000000000000
Q ss_pred ----ceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 213 ----LPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 213 ----~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
..+.......+.+.+++|+|++++.++.... .|+.+++.+|...+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 228 KDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 0000011122468899999999999987542 47899999887654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=189.66 Aligned_cols=234 Identities=15% Similarity=0.124 Sum_probs=159.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC---CCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI---PSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++|++|||||+|+||++++++|+++ +++|++.+|.... ..+.+. ......++.++.+|++|.+.+.++++
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 96 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPD-EIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMA 96 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHH-HHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChH-HHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence 34566789999999999999999999999 6789999884321 111111 11123578899999999999888774
Q ss_pred c-----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcC
Q 005949 78 T-----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
. .++|+|||+||...... +.+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---- 171 (281)
T 3v2h_A 97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASP---- 171 (281)
T ss_dssp HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----
T ss_pred HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCC----
Confidence 3 37999999999764322 33455678999999999999887 3333 57999999987654332
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHH--HHcCCC-ceeecC
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILL--AMRGLP-LPIHGD 218 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ 218 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++.... ..+..... ...... ......
T Consensus 172 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 239 (281)
T 3v2h_A 172 ----------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK--QIPDQARTRGITEEQVINEVMLK 239 (281)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------------------
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh--hcchhhhhcCCCHHHHHHHHHHh
Confidence 23579999999999999887653 8999999999999985421 11110000 000000 011223
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+...+.+++++|+|++++.++... ..|+.+++.+|.
T Consensus 240 ~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 240 GQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred cCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 344567899999999999988654 358899998774
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-21 Score=188.64 Aligned_cols=231 Identities=18% Similarity=0.098 Sum_probs=157.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCc-----CCCCeEEEEccCCCHHHHHHH
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSK-----ASSNFKFVKGDIASADLVNFL 75 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~ 75 (668)
.|++++||||||+|+||+++++.|+++ +++|++++|...... ...+.... ...++.++.+|++|.+.+.++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 81 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL 81 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence 456789999999999999999999999 688999988642110 00110000 014688999999999998887
Q ss_pred hcc-----CCC-CEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCC
Q 005949 76 LIT-----ESI-DTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 76 ~~~-----~~~-d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~ 141 (668)
++. .++ |+|||+||..... ...+++...+++|+.++.++++++... +..++||++||...+.+..
T Consensus 82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 160 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV- 160 (264)
T ss_dssp HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT-
T ss_pred HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC-
Confidence 743 245 9999999976432 233456678999999999999987653 2136999999976543221
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
+...|+.+|.+.|.+++.++.+ .+++++++|||.++++... ...+.+......+.
T Consensus 161 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~------- 218 (264)
T 2pd6_A 161 -------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ--KVPQKVVDKITEMI------- 218 (264)
T ss_dssp -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGC-------
T ss_pred -------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh--hcCHHHHHHHHHhC-------
Confidence 2457999999999999988766 5899999999999998652 11111111111111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHH
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVID 260 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~e 260 (668)
....+++++|+|++++.++... ..++.+++.+|..++...
T Consensus 219 --~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~ 261 (264)
T 2pd6_A 219 --PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL 261 (264)
T ss_dssp --TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred --CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence 1124679999999999888653 357889999887655443
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=183.23 Aligned_cols=224 Identities=13% Similarity=0.151 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++++|.... .+..... ...++.++.+|++|.+++.++++.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPA--GEEPAAE-LGAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHH--HHHHHHH-hCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 6889998886432 2221111 134688999999999998887743
Q ss_pred CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc---------CCCcEEEEEcCccccCCCCC
Q 005949 79 ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT---------GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~vyg~~~~ 141 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... +...++|++||...+.+..
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~- 158 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI- 158 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT-
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC-
Confidence 279999999997642 1223456678999999999999988753 1246899999987764432
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|.++... ..............
T Consensus 159 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~------- 216 (257)
T 3tpc_A 159 -------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA--GMPQDVQDALAASV------- 216 (257)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCS-------
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc--cCCHHHHHHHHhcC-------
Confidence 2457999999999999888766 5899999999999988542 11111111111111
Q ss_pred CCce-EeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005949 219 GSNV-RSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKERR 257 (668)
Q Consensus 219 ~~~~-~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~s 257 (668)
.. ..+.+.+|+|++++.+++... .|+.+++.+|..++
T Consensus 217 --p~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 217 --PFPPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp --SSSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred --CCCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 11 347789999999999887643 57899999886554
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=190.57 Aligned_cols=225 Identities=15% Similarity=0.115 Sum_probs=162.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc--C-CCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK--A-SSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~--~-~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|... ......... . ..++.++.+|++|.+.+.++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVD--RLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999 678999888632 111111100 0 34688999999999998887742
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ .+++|++||...|.+..
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 152 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLW------- 152 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC-------
Confidence 2799999999975422 2334456788999999999988774 334 68999999988876432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMRGLPL 213 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~ 213 (668)
+...|+.+|...+.+.+.++.+ ++++++++|||.|++|... ... ..+........
T Consensus 153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (263)
T 3ai3_A 153 -------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI--KTAKELTKDNGGDWKGYLQSVADEH-- 221 (263)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH--HHHHHHTTTTTCCHHHHHHHHHHHH--
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh--hhhHhhhcccCCcHHHHHHHHHhcC--
Confidence 2457999999999999998765 5899999999999998431 010 11111111110
Q ss_pred eeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 214 PIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 214 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
.....+++++|+|++++.++..+. .|+.|++.+|...+
T Consensus 222 ------~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 222 ------APIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp ------CTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred ------CCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 112357899999999999887542 47899999887654
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-21 Score=186.74 Aligned_cols=221 Identities=14% Similarity=0.138 Sum_probs=159.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+|+||||||+|+||++++++|+++ +++|++++|.... ...+.. .....++.++.+|++|.+.+.++++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAET--LEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQ 77 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999999 6789999886421 111110 11124688999999999998888742
Q ss_pred -CCCCEEEEcCccCCccc-------ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN-------SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||...... ..+++...+++|+.++.++++.+. +.+ .+++|++||...+....
T Consensus 78 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------ 150 (250)
T 2cfc_A 78 FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFP------ 150 (250)
T ss_dssp HSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred hCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC------
Confidence 27999999999754221 233456788999999987776553 334 68999999987765432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...|.+++.++.+. +++++++|||.++++........+.+........+ ..
T Consensus 151 --------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~ 213 (250)
T 2cfc_A 151 --------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP---------QK 213 (250)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT---------TC
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC---------CC
Confidence 24579999999999999987664 89999999999999865210000122233333222 12
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+.+.+|+|++++.++..+. .|+.+++.+|.
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 214 EIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp SCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence 46799999999999887542 47789998764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-21 Score=184.00 Aligned_cols=213 Identities=19% Similarity=0.187 Sum_probs=160.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----CCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----ESI 81 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~ 81 (668)
+|+||||||+|+||++++++|+++ +++|++++|... ..++.++.+|++|.+.+.++++. .++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc------------ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 579999999999999999999999 688999988542 12458899999999999888743 279
Q ss_pred CEEEEcCccCCcccc----cC----ChHHHHHHHHHHHHHHHHHHHHcC---------CCcEEEEEcCccccCCCCCCcC
Q 005949 82 DTIMHFAAQTHVDNS----FG----NSFEFTKNNIYGTHVLLEACKVTG---------QIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 82 d~Vih~a~~~~~~~~----~~----~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
|+|||+||....... .+ ++...+++|+.++.++++++...- ...+||++||...+....
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 143 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---- 143 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT----
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----
Confidence 999999997543211 11 556788999999999999887531 123999999988876432
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...|.+++.++.+. +++++++|||.|+++.... ....+........++.
T Consensus 144 ----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~------- 204 (242)
T 1uay_A 144 ----------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG--LPEKAKASLAAQVPFP------- 204 (242)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT--SCHHHHHHHHTTCCSS-------
T ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc--cchhHHHHHHhhCCCc-------
Confidence 24579999999999998877653 8999999999999985321 1122333333332210
Q ss_pred eEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCcc
Q 005949 222 VRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKER 256 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~ 256 (668)
..+++++|+|++++.++.... .|+.|++.+|..+
T Consensus 205 -~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~ 239 (242)
T 1uay_A 205 -PRLGRPEEYAALVLHILENPMLNGEVVRLDGALRM 239 (242)
T ss_dssp -CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred -ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeec
Confidence 247899999999999988643 5789999987654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-20 Score=183.54 Aligned_cols=221 Identities=18% Similarity=0.107 Sum_probs=163.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.+|... .+....... ..++.++.+|++|.+++.++++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARA--GARVVLADLPET--DLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTS--CHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 688999988642 221111111 34688999999999998888743
Q ss_pred CCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------- 154 (271)
T 3tzq_B 84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYD-------- 154 (271)
T ss_dssp SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCS--------
T ss_pred CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCC--------
Confidence 279999999997632 2233445678999999999999988 5544 67999999987764432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|++|..... .............+. ..+
T Consensus 155 ------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~---------~r~ 218 (271)
T 3tzq_B 155 ------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG-LPQPIVDIFATHHLA---------GRI 218 (271)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT---------SSC
T ss_pred ------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc-CCHHHHHHHHhcCCC---------CCC
Confidence 2457999999999999998876 589999999999999865311 112223333222211 235
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+|+|++++.++... ..|+.+++.+|.
T Consensus 219 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 219 GEPHEIAELVCFLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence 68999999999988653 257899998884
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-21 Score=185.38 Aligned_cols=230 Identities=15% Similarity=0.094 Sum_probs=160.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|+||||||+|+||+++++.|+++ +++|++++|.... ........ . .++.+|++|.+.+.++++.
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~ 72 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG---KEVAEAIG--G-AFFQVDLEDERERVRFVEEAA 72 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH---HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH---HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHH
Confidence 66778899999999999999999999999 6789998886432 11111111 3 7889999999988877643
Q ss_pred ---CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++... ...+++|++||...+.+..
T Consensus 73 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------- 144 (256)
T 2d1y_A 73 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ-------- 144 (256)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC--------
Confidence 37999999999764321 22345678899999999999877532 2268999999987653321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHH-cCCCceeecCCCceEe
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAM-RGLPLPIHGDGSNVRS 224 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.+.++.. ..+..... ................
T Consensus 145 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (256)
T 2d1y_A 145 ------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV------LEAIALSPDPERTRRDWEDLHALRR 212 (256)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HHHHC--------CHHHHTTSTTSS
T ss_pred ------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh------hhccccccCCHHHHHHHHhcCCCCC
Confidence 24579999999999999887653 89999999999987521 11100000 0110000111222345
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRV 258 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~ 258 (668)
+++++|+|++++.++..+ ..|+.|++.+|...+.
T Consensus 213 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 213 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred CcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence 889999999999988754 3578999998876543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-21 Score=185.23 Aligned_cols=222 Identities=17% Similarity=0.149 Sum_probs=163.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.++.... ..+.+.. .....++.++.+|++|.+++.++++.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKE-KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVS 78 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999 6888887764321 1111111 11234688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ ..++|++||...+.+..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 149 (246)
T 3osu_A 79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNP-------- 149 (246)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC--------
Confidence 2799999999976422 233455678999999999999988 4434 57999999976654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|.++... ...+.+......+.++ ..+
T Consensus 150 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~p~---------~r~ 212 (246)
T 3osu_A 150 ------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD--ALSDELKEQMLTQIPL---------ARF 212 (246)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS--CSCHHHHHHHHTTCTT---------CSC
T ss_pred ------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc--ccCHHHHHHHHhcCCC---------CCC
Confidence 2457999999999999988764 4899999999999998653 2334444444443322 246
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+.+|++++++.++.... .|+.|++.+|.
T Consensus 213 ~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 213 GQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 688999999998886542 47899999774
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-21 Score=189.24 Aligned_cols=236 Identities=18% Similarity=0.142 Sum_probs=162.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-----------CCccccCC--CcCCCCeEEEEccCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----------SNLKNLIP--SKASSNFKFVKGDIA 67 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-----------~~~~~~~~--~~~~~~~~~~~~Dl~ 67 (668)
|..+++|++|||||+|+||++++++|+++ +++|++++|.... ..++.... .....++.++.+|++
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR 87 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence 34456789999999999999999999999 7889998874211 01111100 112346889999999
Q ss_pred CHHHHHHHhcc-----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCcc
Q 005949 68 SADLVNFLLIT-----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDE 134 (668)
Q Consensus 68 d~~~~~~~~~~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~ 134 (668)
|.+++.++++. .++|+|||+||...... ..+++...+++|+.++.++++++.. .+...++|++||..
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA 167 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence 99998887743 37999999999865322 3344567889999999999988743 22246899999987
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCC
Q 005949 135 VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGL 211 (668)
Q Consensus 135 vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~ 211 (668)
.+.... +...|+.+|...+.+.+.++.+ +++++.+++||.|.+|..........+........
T Consensus 168 ~~~~~~--------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~ 233 (280)
T 3pgx_A 168 GLKATP--------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVH 233 (280)
T ss_dssp GTSCCT--------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGG
T ss_pred hccCCC--------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhh
Confidence 764432 2357999999999999998876 58999999999999986532111111111000001
Q ss_pred CceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 212 PLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 212 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...... .... .+++++|+|++++.++... ..|+.+++.+|.
T Consensus 234 ~~~~~~-~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 234 SFPPMP-VQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp GSCCBT-TBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhhcc-cCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 111111 1112 3889999999999888643 257899998774
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=189.44 Aligned_cols=239 Identities=18% Similarity=0.111 Sum_probs=167.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC----------ccccCC--CcCCCCeEEEEccCCCHHH
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN----------LKNLIP--SKASSNFKFVKGDIASADL 71 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----------~~~~~~--~~~~~~~~~~~~Dl~d~~~ 71 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|...... +..... .....++.++.+|++|.+.
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 45789999999999999999999999 788998887532110 000000 0113478999999999999
Q ss_pred HHHHhcc-----CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCC
Q 005949 72 VNFLLIT-----ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 72 ~~~~~~~-----~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~ 142 (668)
+.++++. .++|+|||+||........+++...+++|+.++.++++++.. .+...++|++||...+......
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 168 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA 168 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence 8888743 379999999998765444556778999999999999988643 2224699999998765443211
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
..+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++..........+................
T Consensus 169 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (278)
T 3sx2_A 169 ----------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA 238 (278)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCS
T ss_pred ----------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhh
Confidence 1123569999999999999987654 799999999999998653211111121222222211112222
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.. +.+++++|+|++++.++... ..|+.+++.+|..
T Consensus 239 ~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 276 (278)
T 3sx2_A 239 MP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276 (278)
T ss_dssp SS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred cC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence 23 56889999999999988643 3578999987753
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=189.76 Aligned_cols=223 Identities=14% Similarity=0.098 Sum_probs=147.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ...... .....++.++.+|+.|.+.+.+++..
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYE--LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6789998885321 111110 01134688999999999998888753
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ .+++|++||...+....
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 159 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS------- 159 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCC-------
Confidence 5799999999975422 233445678899999999999888 3444 68999999987764321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...|.+++.++.+. +++++++|||.++++..... ....+....... .....
T Consensus 160 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~---------~~~~~ 222 (266)
T 1xq1_A 160 -------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-YDDEFKKVVISR---------KPLGR 222 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh-cCHHHHHHHHhc---------CCCCC
Confidence 24679999999999999887664 89999999999999865211 001111111111 11124
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+++++|+|++++.++... ..|+.+++.+|..
T Consensus 223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 223 FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 256 (266)
T ss_dssp -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred CcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence 778999999999888643 2478899998754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=191.01 Aligned_cols=226 Identities=16% Similarity=0.104 Sum_probs=161.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+.+++|+||||||+|+||++++++|+++ +++|++++|... .....+... ....++.++.+|++|.+.+.+++..
T Consensus 3 ~~l~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (258)
T 3afn_B 3 PDLKGKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAP-ANIDETIASMRADGGDAAFFAADLATSEACQQLVDEF 79 (258)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCC-TTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCch-hhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4466789999999999999999999999 688999888621 111111110 1134688999999999999888742
Q ss_pred ----CCCCEEEEcCcc-CCcc----cccCChHHHHHHHHHHHHHHHHHHHHc--------CCCcEEEEEcCccccCCCCC
Q 005949 79 ----ESIDTIMHFAAQ-THVD----NSFGNSFEFTKNNIYGTHVLLEACKVT--------GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 79 ----~~~d~Vih~a~~-~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~v~~SS~~vyg~~~~ 141 (668)
.++|+|||+||. .... ...+++...+++|+.++.++++++... +...++|++||...+...
T Consensus 80 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-- 157 (258)
T 3afn_B 80 VAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-- 157 (258)
T ss_dssp HHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC--
T ss_pred HHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC--
Confidence 279999999996 3211 122335568899999999998866431 112699999998765411
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
..+...|+.+|...|.+++.++.+. +++++++|||.++++.... ..+.+......+.+
T Consensus 158 -----------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~------ 218 (258)
T 3afn_B 158 -----------GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD--KTQDVRDRISNGIP------ 218 (258)
T ss_dssp -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT--CCHHHHHHHHTTCT------
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc--cCHHHHHHHhccCC------
Confidence 1134579999999999999887654 8999999999999986532 12333343333322
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG----EVGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~ 254 (668)
...+++++|+|++++.++..+ ..++.|++.+|.
T Consensus 219 ---~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 219 ---MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp ---TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred ---CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 235789999999999888653 247899998775
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.8e-21 Score=186.76 Aligned_cols=224 Identities=13% Similarity=0.116 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|... .+..+.... ..++ .++.+|++|.+.+.+++..
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAA--ALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence 34679999999999999999999999 688999988632 111111111 1245 8899999999998887743
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..++....+++|+.++.++++++ ++.+ .++||++||...+....
T Consensus 84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------- 152 (254)
T 2wsb_A 84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNR---------- 152 (254)
T ss_dssp SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS----------
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCC----------
Confidence 47999999999765322 22334578889999977777655 3444 68999999988765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
..|...|+.+|...|.+++.++.+. +++++++|||.++++........+.+........+ ...+++
T Consensus 153 --~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 221 (254)
T 2wsb_A 153 --PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGE 221 (254)
T ss_dssp --SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBC
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCC
Confidence 1133679999999999999887664 89999999999998743100000122222222211 124789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
++|+|++++.++... ..|+.+++.+|.
T Consensus 222 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 222 PSEIAAAALFLASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence 999999999888643 357889998764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.7e-21 Score=184.68 Aligned_cols=222 Identities=18% Similarity=0.193 Sum_probs=150.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|. +++|+||||||+|+||++++++|+++ +++|+++ +|... ....+.. .....++.++.+|++|.+.+.+++.
T Consensus 1 M~-l~~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 75 (247)
T 2hq1_A 1 MQ-LKGKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPAST--SLDATAEEFKAAGINVVVAKGDVKNPEDVENMVK 75 (247)
T ss_dssp CT-TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCS--HHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CC-CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 54 56789999999999999999999999 6788888 44321 1111110 0113468899999999999888774
Q ss_pred c-----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCcc-ccCCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDE-VYGETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~-vyg~~~~~~ 143 (668)
. .++|+|||+||.... ....+++...+++|+.++.++++++.. .+ .++||++||.. .|+..
T Consensus 76 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---- 150 (247)
T 2hq1_A 76 TAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNA---- 150 (247)
T ss_dssp HHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC------------
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC----
Confidence 3 279999999997542 223456678999999999888877653 34 67999999964 44432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|...|.+++.++.+. ++++.+++||.+.++... ............+.+
T Consensus 151 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~-------- 209 (247)
T 2hq1_A 151 -----------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD--VLPDKVKEMYLNNIP-------- 209 (247)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHTTST--------
T ss_pred -----------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh--hcchHHHHHHHhhCC--------
Confidence 24579999999999999887654 899999999999876321 111122222222211
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+++++|+++++..++..+ ..++.|++++|.
T Consensus 210 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 210 -LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence 224789999999999888653 257899998775
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=187.20 Aligned_cols=226 Identities=16% Similarity=0.117 Sum_probs=163.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++|+||||||+|+||+++++.|+++ +++|++++|.... +..... .....++.++.+|++|.+++.+++.
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~ 111 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRE--LSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR 111 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGG--GHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence 34456789999999999999999999999 6789999886432 111111 1112478999999999999887764
Q ss_pred c-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCcccc-CCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVY-GETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vy-g~~~~~~ 143 (668)
. .++|+|||+||..... ...+++...+++|+.|+.++++++. +.+ ..++|++||...+ ..
T Consensus 112 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~----- 185 (293)
T 3rih_A 112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG----- 185 (293)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBB-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCC-----
Confidence 3 3799999999976432 2334556789999999999999873 434 5799999997642 11
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
..+...|+.+|...+.+.+.++.+ +|+++.+++||.|+++.... ....+........++
T Consensus 186 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~------- 247 (293)
T 3rih_A 186 ---------YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD--MGEEYISGMARSIPM------- 247 (293)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH--TCHHHHHHHHTTSTT-------
T ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh--ccHHHHHHHHhcCCC-------
Confidence 112457999999999999988766 48999999999999874311 112333333333322
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
..+...+|+|++++.++... ..|+.+++.+|..+
T Consensus 248 --~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 248 --GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred --CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 12457899999999888643 35789999987643
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=185.02 Aligned_cols=230 Identities=13% Similarity=0.074 Sum_probs=163.6
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+ |+||++++++|+++ +++|++++|..... ....+... ...+.++.+|++|.+.+.++++.
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEA--LGGALLFRADVTQDEELDALFAGVK 81 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHH--TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHh--cCCcEEEECCCCCHHHHHHHHHHHH
Confidence 456899999999 99999999999999 68899988864200 11111111 12378899999999998887743
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------ 155 (261)
T 2wyu_A 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------ 155 (261)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC------
Confidence 279999999997542 22344566789999999999999987641 025999999977654321
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|+++........+.+........++ .
T Consensus 156 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~ 218 (261)
T 2wyu_A 156 --------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------R 218 (261)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------S
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------C
Confidence 23469999999999999887664 899999999999998642212223333333222221 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHH
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVID 260 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~e 260 (668)
.+.+++|+|++++.++... ..|+.|++.+|...+..|
T Consensus 219 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred CCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence 3568999999999888643 257899999887655433
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=184.34 Aligned_cols=226 Identities=16% Similarity=0.106 Sum_probs=164.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++|+||||||+|+||++++++|+++ +++|++.+|.... .+.... .....++.++.+|++|.+.+.++++
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTAD--IDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHH
Confidence 45566899999999999999999999999 6789999886421 111110 1112478999999999999888774
Q ss_pred c-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCcccc-CCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVY-GETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vy-g~~~~~~ 143 (668)
. .++|+|||+||..... .+.+++...+++|+.++.++++++... + ..++|++||...+ ..
T Consensus 81 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~----- 154 (262)
T 3pk0_A 81 RAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG----- 154 (262)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBC-----
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC-----
Confidence 2 3799999999975432 233445678899999999999877654 4 5799999997642 11
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
..+...|+.+|...+.+.+.++.+ +++++.+++||.|.++.... ....+........+.
T Consensus 155 ---------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~------- 216 (262)
T 3pk0_A 155 ---------YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE--NGEEYIASMARSIPA------- 216 (262)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT--TCHHHHHHHHTTSTT-------
T ss_pred ---------CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc--cCHHHHHHHHhcCCC-------
Confidence 112457999999999999998876 58999999999999874321 112233333332221
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
..+.+.+|+|++++.++... ..|+.+++.+|..+
T Consensus 217 --~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 217 --GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred --CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 13568999999999888653 35889999987643
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-22 Score=194.36 Aligned_cols=214 Identities=12% Similarity=-0.032 Sum_probs=152.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccc-----------cccccCChhHHHHHhhhc--CCCEEEEcccccCCCCccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEY-----------GKGRLEDCSSLIADVQSV--KPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~-----------~~~D~~d~~~~~~~l~~~--~~d~Vih~a~~~~~~~~~~ 449 (668)
|++|+||||+||||+++++.|+++|++|.. +.+|++|++++.++++.+ ++|+|||+||.. .
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~---~--- 74 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG---V--- 74 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC---T---
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCCC---C---
Confidence 468999999999999999999999998743 356888888888888855 789999999966 1
Q ss_pred cccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCC-CCCCCCCCCCC-------CCCCCCcch
Q 005949 450 CESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPE-GSGIGYKEEDT-------PNFTGSFYS 516 (668)
Q Consensus 450 ~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~-~~~~~~~ee~~-------~~~~~~~Y~ 516 (668)
...+....+++|+.++.+++++|... + .++|++||..+|+.....+. .+.....+++. +..+.+.|+
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 154 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYA 154 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHH
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHH
Confidence 13456788999999999999988765 3 47889999888854321110 00000000000 012447899
Q ss_pred hhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--HHHHhhcccceee---cCCCcccHhhHHHHHHHHHhcc---
Q 005949 517 KTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKISRYNKVVN---IPNSMTVLDELLPISIEMAKRN--- 585 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~---~~~~~~~v~D~a~~~~~~~~~~--- 585 (668)
.||...|.+++.+.+. .++++.++||+.++++.. ++........... ....+++++|+|++++.++.++
T Consensus 155 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 234 (255)
T 2dkn_A 155 GSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASF 234 (255)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCccc
Confidence 9999999999887643 589999999999999852 2111111110001 2347899999999999999764
Q ss_pred -CCceeeecCCCccCHHH
Q 005949 586 -LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 586 -~~g~~ni~~~~~~s~~e 602 (668)
.+++||++++..++++|
T Consensus 235 ~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 235 IHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp CCSCEEEESTTHHHHHCT
T ss_pred ceeeEEEecCCeEeeeec
Confidence 35699999988777654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=185.76 Aligned_cols=226 Identities=14% Similarity=0.118 Sum_probs=163.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.+|.... .+.... .....++.++.+|++|.+.+.++++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEG--AEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 7889998886421 111111 11235788999999999998887743
Q ss_pred --CCCCEEEEcCccCCc---ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... +...+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 155 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNV--------- 155 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCT---------
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCC---------
Confidence 379999999997653 22344566789999999999998874 323 57999999987754332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|...+.+.+.++.++ ++++..++||.|.++..... ..+..........+ ...+.
T Consensus 156 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p---------~~r~~ 220 (256)
T 3gaf_A 156 -----RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV-LTPEIERAMLKHTP---------LGRLG 220 (256)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-CCHHHHHHHHTTCT---------TSSCB
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc-cCHHHHHHHHhcCC---------CCCCC
Confidence 24579999999999999987663 89999999999987632100 00122222222221 23467
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKKERRV 258 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~ 258 (668)
+++|+|++++.++... ..|+.+++.+|...++
T Consensus 221 ~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 221 EAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred CHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 8999999999988643 2588999998876654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.9e-21 Score=185.11 Aligned_cols=224 Identities=17% Similarity=0.123 Sum_probs=158.7
Q ss_pred CC-CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc---CCCCeEEEEccCCCHHHHHHHh
Q 005949 1 MA-TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK---ASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 1 m~-~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|. .+++++||||||+|+||++++++|+++ +++|++++|... ..+.+.... ...++.++.+|+.|.+.+.+++
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGE--RAKAVAEEIANKYGVKAHGVEMNLLSEESINKAF 76 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHH
Confidence 54 245789999999999999999999999 688999988532 111111000 1346889999999999998887
Q ss_pred cc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCc
Q 005949 77 IT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 77 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~ 143 (668)
.. .++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ .++||++||...+.+..
T Consensus 77 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--- 152 (248)
T 2pnf_A 77 EEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNV--- 152 (248)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCT---
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCC---
Confidence 42 2799999999975421 233445678999999997776654 3434 68999999975543221
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|...|.+.+.++.+ .+++++++|||.++++.... +...+........+
T Consensus 153 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~-------- 211 (248)
T 2pnf_A 153 -----------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV--LSEEIKQKYKEQIP-------- 211 (248)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--SCHHHHHHHHHTCT--------
T ss_pred -----------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh--ccHHHHHHHHhcCC--------
Confidence 2357999999999999988765 37999999999999986421 11122222222211
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+++++|+|++++.++... ..|+.|++.+|.
T Consensus 212 -~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 212 -LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence 124789999999999888653 357899998763
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-19 Score=177.05 Aligned_cols=223 Identities=15% Similarity=0.045 Sum_probs=150.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... . ..++..+.+|++|.+.+.++++.
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~---~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQ---E-------QYPFATEVMDVADAAQVAQVCQRLLAET 72 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCS---S-------CCSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhh---h-------cCCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999 6889998886421 0 11378899999999998888742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ .+++|++||...+.+..
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 141 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRI---------- 141 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC----------
Confidence 3799999999975422 233456678999999999999887 3434 58999999987764321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHH-HHHcCCCceeecCCCceEece
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|...|.+.+.++.+ .++++++++||.++++............. ....... ..........+.
T Consensus 142 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~ 215 (250)
T 2fwm_X 142 ----GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIA 215 (250)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCc
Confidence 2457999999999999988765 38999999999999985421100000000 0000000 000001122478
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+.+|+|++++.++..+ ..|+.+++.+|..
T Consensus 216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 216 RPQEIANTILFLASDLASHITLQDIVVDGGST 247 (250)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 9999999999988653 2578899987753
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=181.14 Aligned_cols=215 Identities=13% Similarity=0.069 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE---- 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 79 (668)
|++++||||||+|+||++++++|+++|..++|++++|.... ...+... ...++.++.+|++|.+.+.++++..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~--~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK--ATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG--CHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHH--HHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999998322899999886432 2222111 2457899999999999988877421
Q ss_pred ---CCCEEEEcCccCC-c----ccccCChHHHHHHHHHHHHHHHHHHHHc----------CC----CcEEEEEcCccccC
Q 005949 80 ---SIDTIMHFAAQTH-V----DNSFGNSFEFTKNNIYGTHVLLEACKVT----------GQ----IRRFIHVSTDEVYG 137 (668)
Q Consensus 80 ---~~d~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~----~~~~v~~SS~~vyg 137 (668)
++|+|||+||... . ....++....+++|+.++.++++++... +. ..+||++||...+.
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 7999999999765 1 2223445678899999999998877543 21 47999999987765
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCce
Q 005949 138 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLP 214 (668)
Q Consensus 138 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 214 (668)
.... +.....+...|+.+|...|.+++.++.++ ++++.+++||.|.++....
T Consensus 158 ~~~~-------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------ 212 (250)
T 1yo6_A 158 TDNT-------SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------ 212 (250)
T ss_dssp TTCC-------STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred CCcc-------cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------
Confidence 4321 11122345679999999999999988764 8999999999998764310
Q ss_pred eecCCCceEeceeHHHHHHHHHHHHhcCC--CCceEEEcCCC
Q 005949 215 IHGDGSNVRSYLYCEDVAEAFECILHKGE--VGHVYNVGTKK 254 (668)
Q Consensus 215 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~~ 254 (668)
..+++.+|+|++++.++..+. ..+.|...++.
T Consensus 213 --------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~ 246 (250)
T 1yo6_A 213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLK 246 (250)
T ss_dssp --------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred --------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence 135688999999999998654 23344443343
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-21 Score=189.53 Aligned_cols=225 Identities=16% Similarity=0.066 Sum_probs=159.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|... .....+.. .....++.++.+|++|.+.+.+++..
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSS-KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCch-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 678988888321 11111100 01134688999999999998887742
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCcccc-CCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVY-GETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vy-g~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- .-++||++||...| ....
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------- 165 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------- 165 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----------
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC----------
Confidence 279999999997542 12333456789999999999999887641 01699999998876 3321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC-----------CChHHHHHHHHHcCCCceee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----------EKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 216 (668)
+...|+.+|.+.|.+++.++.++ +++++++|||.++++.... ......+......+
T Consensus 166 ----~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 235 (274)
T 1ja9_A 166 ----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM------ 235 (274)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT------
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc------
Confidence 24569999999999999887664 8999999999998863210 00001122221111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...+.+++++|+|++++.++..+. .|+.|++++|.
T Consensus 236 ---~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 236 ---NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp ---STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---CCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 123458899999999999987532 57899998763
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-20 Score=181.56 Aligned_cols=221 Identities=13% Similarity=0.014 Sum_probs=158.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++|+||||||+|+||+++++.|+++ +++|++++|... ......... ..++.++.+|++|.+.+.+++.. .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVM--AAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 4579999999999999999999999 678999888642 111111111 12678899999999998887742 2
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||..... ...+++...+++|+.++.++++++... +...++|++||...+.+..
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 154 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP----------- 154 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT-----------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC-----------
Confidence 799999999975422 223345678899999999999877642 2247999999987654321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcCCCceeec
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMRGLPLPIHG 217 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 217 (668)
+...|+.+|...+.+.+.++.+. +++++++|||.|+++... ... ..........
T Consensus 155 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------- 222 (263)
T 3ak4_A 155 ---LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE--REIIWEAELRGMTPEAVRAEYVSL------- 222 (263)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH--HHHHHHHHHHTSCHHHHHHHHHHT-------
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh--hhccccccccccCcHHHHHHHHhc-------
Confidence 24579999999999999887654 899999999999987431 010 1111111111
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.....+++++|+|++++.++..+ ..|+.|++.+|..
T Consensus 223 --~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 223 --TPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp --CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred --CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence 11234789999999999988653 3578999998754
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=179.39 Aligned_cols=224 Identities=15% Similarity=0.080 Sum_probs=161.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-C
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-E 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~ 79 (668)
|..+++|+||||||+|+||+++++.|+++ +++|++++|... .+..+. . ..++.++.+|++|.+++.++++. .
T Consensus 1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (246)
T 2ag5_A 1 MGRLDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINES--KLQELE-K--YPGIQTRVLDVTKKKQIDQFANEVE 73 (246)
T ss_dssp CCTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHGGGG-G--STTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHH-h--ccCceEEEeeCCCHHHHHHHHHHhC
Confidence 66778899999999999999999999999 688999988642 222221 1 12688999999999999877654 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||..... ...+++...+++|+.++.++++++.. .+ .+++|++||...+....
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------- 141 (246)
T 2ag5_A 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV----------- 141 (246)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-----------
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC-----------
Confidence 799999999975432 22344567889999999999988753 33 57999999977654321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
.+...|+.+|...|.+.+.++.+. +++++++|||.+++|.... ...............+ ...
T Consensus 142 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 210 (246)
T 2ag5_A 142 --VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGR 210 (246)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSS
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCC
Confidence 124579999999999999987653 8999999999999874210 0000111111211111 123
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 211 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 679999999999988643 257889988764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=185.69 Aligned_cols=225 Identities=16% Similarity=0.124 Sum_probs=159.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++|+||||||+|+||++++++|+++ +++|++++|... .....+... ....++.++.+|++|.+.+.+++..
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKE-DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCCh-HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 688998888321 111111000 1124578899999999998887742
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...+||++||...+.+.
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 152 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-------- 152 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC--------
Confidence 2799999999975431 233445678899999999988776542 214799999997665322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI--PKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
.+...|+.+|.+.|.+.+.++.++ +++++++|||.|+++... ... +..........+ .
T Consensus 153 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~---------~ 215 (261)
T 1gee_A 153 ------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA--EKFADPEQRADVESMIP---------M 215 (261)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH--HHHHSHHHHHHHHTTCT---------T
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh--hcccChhHHHHHHhcCC---------C
Confidence 235679999999999998877653 899999999999998541 110 112222222111 1
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+++++|+|++++.++... ..|+.+++.+|..
T Consensus 216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence 24789999999999888643 2577899988754
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.7e-21 Score=189.46 Aligned_cols=251 Identities=12% Similarity=0.035 Sum_probs=169.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc----------ccC--CCcCCCCeEEEEccCCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK----------NLI--PSKASSNFKFVKGDIAS 68 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~----------~~~--~~~~~~~~~~~~~Dl~d 68 (668)
|..+++|+||||||+|+||+++++.|+++ +++|++++|........ ... ......++.++.+|++|
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD 82 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC
Confidence 55567899999999999999999999999 68899888763211100 000 01123578999999999
Q ss_pred HHHHHHHhcc-----CCCCEEEEcCccCCcc--cccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCC
Q 005949 69 ADLVNFLLIT-----ESIDTIMHFAAQTHVD--NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 69 ~~~~~~~~~~-----~~~d~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~ 140 (668)
.+.+.+++.. .++|+|||+||..... ...+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~ 162 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAA 162 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccc
Confidence 9998877743 3799999999986532 3345567899999999999999887642 235999999977664432
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCc----
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPL---- 213 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~---- 213 (668)
..+. .+..+..+...|+.+|...+.+.+.++.++ ++++.+++||.|.++..........+... ......
T Consensus 163 ~~~~---~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (287)
T 3pxx_A 163 QPPG---AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPD-LEAPSRADAL 238 (287)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTT-SSSCCHHHHH
T ss_pred cccc---ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccc-cccchhHHHH
Confidence 1111 122222234579999999999999988765 89999999999999865321111000000 000000
Q ss_pred -eeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 214 -PIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 214 -~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
...........+.+++|+|++++.++... ..|+.+++.+|..++
T Consensus 239 ~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 239 LAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp HHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 00000111146889999999999988643 358899999886543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=182.33 Aligned_cols=224 Identities=14% Similarity=0.083 Sum_probs=161.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++|+||||||+|+||++++++|+++ +++|++. +|... ....... .....++.++.+|++|.+.+.++++.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKK--AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE 78 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999 7888876 66432 1111111 11234789999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------- 149 (258)
T 3oid_A 79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLE-------- 149 (258)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCT--------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCC--------
Confidence 3789999999965422 2333456789999999999998874 323 57999999987654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++..........+........+ ...+
T Consensus 150 ------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~ 214 (258)
T 3oid_A 150 ------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP---------AGRM 214 (258)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT---------TSSC
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC---------CCCC
Confidence 34579999999999999988764 79999999999998754222222223332222221 1246
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKKER 256 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~ 256 (668)
.+++|+|++++.++.... .|+.+++.+|...
T Consensus 215 ~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 215 VEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp BCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred cCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence 789999999999887542 5889999988643
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.5e-21 Score=186.57 Aligned_cols=231 Identities=14% Similarity=0.114 Sum_probs=163.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|...... ...+. .....++.++.+|+.|.+.+.++++.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVG-KEFGVKTKAYQCDVSNTDIVTKTIQQIDA 88 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHH-HHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHH-HhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999 688999988532110 00110 01134688999999999998877643
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... +..++||++||...+......
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------ 162 (265)
T 1h5q_A 89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS------ 162 (265)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc------
Confidence 3589999999975432 123345678899999999999887543 324799999998776543210
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
..+..+...|+.+|...|.+++.++.+. +++++++|||.|+++.... ..+.+........+ ...+
T Consensus 163 -~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~ 230 (265)
T 1h5q_A 163 -LNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH--MDKKIRDHQASNIP---------LNRF 230 (265)
T ss_dssp -TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--SCHHHHHHHHHTCT---------TSSC
T ss_pred -ccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc--cchhHHHHHHhcCc---------ccCC
Confidence 1122345689999999999999887653 8999999999999986421 11222222222211 1236
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
++++|+|++++.++..+ ..|+.|++.+|..
T Consensus 231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 231 AQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence 78999999999888653 3578999998753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=184.02 Aligned_cols=227 Identities=15% Similarity=0.096 Sum_probs=162.1
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+ |+||+++++.|+++ +++|++++|.... .....+... .....++.+|++|.+.+.++++.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHh--cCCcEEEEccCCCHHHHHHHHHHHH
Confidence 456899999999 99999999999999 6889998886410 011111111 12347889999999998877742
Q ss_pred ---CCCCEEEEcCccCCc--------c-cccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------D-NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... . ...+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 157 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP----- 157 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC-----
Confidence 268999999997542 1 2334566789999999999999987641 125999999977654321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++........+.+........++
T Consensus 158 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 219 (265)
T 1qsg_A 158 ---------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI--------- 219 (265)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------
Confidence 24579999999999999987764 899999999999998643212223333333222221
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
..+.+++|+|++++.++.... .++.|++.+|...+
T Consensus 220 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 220 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 136789999999998886432 47899999886543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-20 Score=183.71 Aligned_cols=224 Identities=17% Similarity=0.072 Sum_probs=160.3
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+ |+||+++++.|+++ +++|++++|.... .....+... ..++.++.+|++|.+.+.++++.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKG--FGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 556899999999 99999999999999 6889998886420 011111111 12367899999999998887743
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.|+.++++++...- ...++|++||...+....
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 169 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP----- 169 (285)
T ss_dssp HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-----
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-----
Confidence 379999999997642 22334456789999999999999887642 136999999977654321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++........+.+........++
T Consensus 170 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~--------- 231 (285)
T 2p91_A 170 ---------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF--------- 231 (285)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------
Confidence 24579999999999999887664 899999999999998653222223333332222211
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+.+++|+|++++.++... ..|+.|++.+|.
T Consensus 232 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 232 GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 13568999999999988643 247789998775
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-20 Score=180.54 Aligned_cols=228 Identities=14% Similarity=0.143 Sum_probs=162.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.|++|++|||||+|+||++++++|+++ +++|++.+|.... +..... .....++.++.+|++|.+.+.++++.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEK--LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 467889999999999999999999999 6889999886421 111111 11234789999999999998887743
Q ss_pred ---CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ..+.+++...+++|+.++.++++++.. .+...++|++||...+....
T Consensus 79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 151 (257)
T 3imf_A 79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP------- 151 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT-------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC-------
Confidence 379999999996442 223345567899999999999988732 23357999999987654432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCChH-HHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEKLI-PKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|.++........ ..+........ ..
T Consensus 152 -------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~ 215 (257)
T 3imf_A 152 -------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV---------PL 215 (257)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS---------TT
T ss_pred -------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC---------CC
Confidence 2456999999999999887643 489999999999999865321111 11111111111 12
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
..+...+|+|++++.++.... .|+.+++.+|..++
T Consensus 216 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 216 GRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 246789999999999886542 57899999887543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=181.05 Aligned_cols=213 Identities=17% Similarity=0.148 Sum_probs=157.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... ..++.++.+|++|.+.+.+++..
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 6889998885421 24678899999999998887742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ...+++|++||...+....
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 141 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK----------- 141 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-----------
Confidence 2799999999975432 233456678999999999988877542 1257999999987765432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChH-------H----HHHHHHHcCCCceeecC
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLI-------P----KFILLAMRGLPLPIHGD 218 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~ 218 (668)
+...|+.+|...+.+.+.++.+++ +++.+++||.+.++... ... . .........
T Consensus 142 ---~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------- 208 (264)
T 2dtx_A 142 ---NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR--KAAELEVGSDPMRIEKKISEWGHE-------- 208 (264)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH--HHHHHHHCSCHHHHHHHHHHHHHH--------
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh--hhhhcccccCchhhHHHHHHHHhc--------
Confidence 245799999999999999887654 89999999999876321 000 0 011111110
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.....+++++|+|++++.++..+ ..|+.+++.+|.
T Consensus 209 -~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 209 -HPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp -STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 11224789999999999988653 357889998775
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9e-21 Score=187.30 Aligned_cols=225 Identities=18% Similarity=0.186 Sum_probs=159.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++|+||||||+|+||+++++.|+++ +++|++++|.... +...... ....++.++.+|++|.+.+.+++..
T Consensus 17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 17 MATQDSEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEG--LRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp TCCTTSCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 44456789999999999999999999999 6889999886421 1111100 1134688999999999998877742
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-----CCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-----GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ...+++|++||...+.+.
T Consensus 93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 167 (277)
T 2rhc_B 93 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV----- 167 (277)
T ss_dssp HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-----
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-----
Confidence 2799999999975422 223345678899999999999987653 125799999998664332
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH-----------HHHHHHHHcC
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI-----------PKFILLAMRG 210 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~-----------~~~~~~~~~~ 210 (668)
.+...|+.+|...+.+.+.++.+. ++++.+++||.+.++... ... ..........
T Consensus 168 ---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 2rhc_B 168 ---------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA--SVREHYSDIWEVSTEEAFDRITAR 236 (277)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHH--HHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred ---------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhh--hhhhhcccccccchHHHHHHHHhc
Confidence 124579999999999999887653 799999999999987421 111 0111111111
Q ss_pred CCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 211 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.....+++++|+|++++.++..+ ..|+.+++.+|.
T Consensus 237 ---------~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 237 ---------VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp ---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---------CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 11234789999999999988654 357889998774
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-21 Score=185.48 Aligned_cols=225 Identities=11% Similarity=0.023 Sum_probs=159.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ....... ....++.++.+|++|.+.+.++++.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKE--LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6889998886421 1111100 1134688899999999998887743
Q ss_pred ---CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+ .+++|++||...+....
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 154 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP------- 154 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT-------
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC-------
Confidence 479999999997542 12334556788999999999998884 333 68999999987654321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---CCChHHHHHHHHHcCCCceeecCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---PEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...|.+.+.++.+. ++++.+++||.+.++... ................ .
T Consensus 155 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~ 218 (260)
T 2ae2_A 155 -------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------A 218 (260)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------T
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------C
Confidence 24579999999999999988764 899999999999876321 0000000000111111 1
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
...+++++|+|++++.++... ..|+.+++.+|...
T Consensus 219 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 219 LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 234789999999999888643 25789999887643
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-21 Score=188.37 Aligned_cols=224 Identities=16% Similarity=0.094 Sum_probs=160.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... +..... .....++..+.+|+.|.+.+.+++..
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQEN--VDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6789999886421 111100 01134688899999999988877642
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... +...+++...+++|+.++.++++++. +.+ .+++|++||...|.+..
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 159 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFP------- 159 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT-------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCC-------
Confidence 379999999997431 12334456788999999999888764 333 68999999988875432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLI--PKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.+.++.... .+ .......... ...
T Consensus 160 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~ 221 (260)
T 2zat_A 160 -------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMDKARKEYMKES---------LRI 221 (260)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSSHHHHHHHHHH---------HTC
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccChHHHHHHHhc---------CCC
Confidence 24579999999999999987654 8999999999999875310 00 0000111100 012
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
+.+.+++|+|+++..++..+. .++.|++.+|...+
T Consensus 222 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 222 RRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred CCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 247799999999998886542 57899999887655
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=184.62 Aligned_cols=225 Identities=16% Similarity=0.219 Sum_probs=160.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++||||||+|+||++++++|+++ +++|+++++..... ...... .....++.++.+|++|.+.+.+++++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETY-KDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHT-GGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHH-HhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999 68898886653211 111110 11124689999999999998888753
Q ss_pred -CCCCEEEEcCccC--C----cccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 -ESIDTIMHFAAQT--H----VDNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 -~~~d~Vih~a~~~--~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.. . .+...+++...+++|+.++.++++++ ++.+ ..++|++||...++...
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~------- 154 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPG------- 154 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCC-------
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCC-------
Confidence 2899999999942 1 12233445678999999999999987 4444 58999999976543222
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
..+...|+.+|.+.+.+.+.++.+ .++++.+++||.|+++... ............. .....
T Consensus 155 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~---------~p~~r 218 (264)
T 3i4f_A 155 -----WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE--ATIQEARQLKEHN---------TPIGR 218 (264)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS--CCHHHHHHC-----------------C
T ss_pred -----CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch--hccHHHHHHHhhc---------CCCCC
Confidence 123467999999999999988766 5899999999999998653 2333322221111 12234
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
+.+.+|+|++++.++... ..|+++++.+|...
T Consensus 219 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 219 SGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred CcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence 678999999999988753 25889999987653
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=182.03 Aligned_cols=221 Identities=15% Similarity=0.143 Sum_probs=158.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCE-EEEEcCCCccCCccccCCCcCCCCeEEEEccCCCH-HHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYK-IVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA-DLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~ 78 (668)
|. +++|+||||||+|+||++++++|+++ +++ |++++|.........+.......++.++.+|++|. +++.+++..
T Consensus 1 m~-l~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T 1sby_A 1 MD-LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKK 77 (254)
T ss_dssp CC-CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CC-CCCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHH
Confidence 44 56789999999999999999999999 564 77888764211122221111133688999999998 877776642
Q ss_pred -----CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC------CCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 -----ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG------QIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||... .+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 78 ~~~~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 146 (254)
T 1sby_A 78 IFDQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH------- 146 (254)
T ss_dssp HHHHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-------
T ss_pred HHHhcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-------
Confidence 37999999999753 46778899999999999999876421 135899999988765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChH--HHHHHHHHcCCCceeecCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLI--PKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...|.+.+.++.+ .++++++++||.|.++..... ... ..........
T Consensus 147 -------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----------- 208 (254)
T 1sby_A 147 -------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS----------- 208 (254)
T ss_dssp -------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT-----------
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc-----------
Confidence 2457999999999999988765 589999999999998742110 000 0000111111
Q ss_pred eEeceeHHHHHHHHHHHHhcCCCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGEVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~ 254 (668)
..+.+++|+|++++.+++....++.|++.+|.
T Consensus 209 -~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG~ 240 (254)
T 1sby_A 209 -HPTQTSEQCGQNFVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp -SCCEEHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCCCEEEEeCCc
Confidence 12348999999999998877778899998774
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.8e-20 Score=179.99 Aligned_cols=224 Identities=14% Similarity=0.067 Sum_probs=163.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ...+.. .....++.++.+|++|.+++.++++.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQAS--AEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 6889998886421 111111 11234789999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+.+..
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 149 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP--------- 149 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT---------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC---------
Confidence 2699999999976432 233455678999999999999876432 1246999999977654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++.... ..+.......... ....+.
T Consensus 150 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~---------~~~~~~ 213 (247)
T 3lyl_A 150 -----GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK--LTDEQKSFIATKI---------PSGQIG 213 (247)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT--SCHHHHHHHHTTS---------TTCCCB
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh--ccHHHHHHHhhcC---------CCCCCc
Confidence 2457999999999999888765 48999999999999886532 2222222222221 223578
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
+++|+|++++.++... ..|+.+++.+|..+
T Consensus 214 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 214 EPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred CHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 9999999999888643 25889999987644
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-20 Score=180.03 Aligned_cols=216 Identities=17% Similarity=0.123 Sum_probs=157.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ........ ..++.++.+|++|.+.+.++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEE--GKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHh-hcCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 6889998886421 11111100 12478899999999998888742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ .+++|++||...+.+..
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 148 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV---------- 148 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCC----------
Confidence 2799999999975432 223445678999999997665544 4444 68999999988765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...|.+.+.++.+ .+++++++|||.|+++... . ....+. ......+++
T Consensus 149 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~---------~~~~~~----~~~~~~~~~ 208 (260)
T 1nff_A 149 ----ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---W---------VPEDIF----QTALGRAAE 208 (260)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---T---------SCTTCS----CCSSSSCBC
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc---c---------chhhHH----hCccCCCCC
Confidence 2347999999999999988765 4899999999999998542 0 000010 011234788
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
++|+|++++.++... ..|+.|++.+|..
T Consensus 209 ~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~ 239 (260)
T 1nff_A 209 PVEVSNLVVYLASDESSYSTGAEFVVDGGTV 239 (260)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence 999999999888653 2478999998764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.84 E-value=6.6e-20 Score=182.67 Aligned_cols=234 Identities=12% Similarity=0.006 Sum_probs=162.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-C
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-S 80 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~ 80 (668)
..+++|+||||||+|+||+++++.|+++ +++|++.+|.... ....... ...++.++.+|++|.+++.++++.. +
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 86 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRK--GEAAART-MAGQVEVRELDLQDLSSVRRFADGVSG 86 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHTT-SSSEEEEEECCTTCHHHHHHHHHTCCC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHH-hcCCeeEEEcCCCCHHHHHHHHHhcCC
Confidence 3456789999999999999999999999 6889999886421 1111111 1346899999999999999988654 7
Q ss_pred CCEEEEcCccCCc--ccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 81 IDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 81 ~d~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
+|+|||+||.... ....+++...+++|+.++.++++++.... .+++|++||...+........ ...+..+..+...
T Consensus 87 iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~-~~~~~~~~~~~~~ 164 (291)
T 3rd5_A 87 ADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLED-LNWRSRRYSPWLA 164 (291)
T ss_dssp EEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSC-TTCSSSCCCHHHH
T ss_pred CCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCccc-ccccccCCCCcch
Confidence 8999999997542 23456677899999999999999998865 579999999887754322111 1122233445567
Q ss_pred hHHHHHHHHHHHHHHHHhc---C--CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
|+.+|.+.+.+.+.++.++ + +++..++||.|..+.... ....+...... .. ..+-....+|+|+
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~--~~~~~~~~~~~---~~------~~~~~~~~~~~A~ 233 (291)
T 3rd5_A 165 YSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA--SGRKLGDALMS---AA------TRVVATDADFGAR 233 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc--cchHHHHHHHH---HH------HHHHhCCHHHHHH
Confidence 9999999999999887664 4 999999999998875421 11111111100 00 1112335899999
Q ss_pred HHHHHHhcCC-CCceEEEcCC
Q 005949 234 AFECILHKGE-VGHVYNVGTK 253 (668)
Q Consensus 234 ai~~~~~~~~-~~~~~ni~~~ 253 (668)
+++.++..+. .|+.+++.+|
T Consensus 234 ~~~~l~~~~~~~G~~~~vdgG 254 (291)
T 3rd5_A 234 QTLYAASQDLPGDSFVGPRFG 254 (291)
T ss_dssp HHHHHHHSCCCTTCEEEETTS
T ss_pred HHHHHHcCCCCCCceeCCccc
Confidence 9998887754 4556666644
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=183.84 Aligned_cols=231 Identities=15% Similarity=0.151 Sum_probs=166.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|++|||||+|+||++++++|+++ +++|++.+|... .+..+... ...++.++.+|++|.+.+.++++.
T Consensus 3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 3 MGNYQGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNES--NIARIREE-FGPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp -CTTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCcceEEEccCCCHHHHHHHHHHHH
Confidence 44456789999999999999999999999 688999988642 12111111 124688999999999998877642
Q ss_pred ---CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||...... +.+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 147 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP---------- 147 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT----------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------
Confidence 37999999999765322 344566789999999999999887531 135899999987765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh----HHHHHHHHHcCCCceeecCCCceE
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL----IPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...+.+.+.++.++ ++++..++||.|.+|....... ...+........+ ..
T Consensus 148 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------~~ 214 (255)
T 4eso_A 148 ----GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP---------MK 214 (255)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST---------TS
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC---------CC
Confidence 24579999999999999988764 8999999999999986432111 1122222221111 12
Q ss_pred eceeHHHHHHHHHHHHhcC--CCCceEEEcCCCcccHH
Q 005949 224 SYLYCEDVAEAFECILHKG--EVGHVYNVGTKKERRVI 259 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~~~s~~ 259 (668)
.+.+.+|+|++++.++... ..|+.+++.+|...++.
T Consensus 215 r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~ 252 (255)
T 4eso_A 215 RNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS 252 (255)
T ss_dssp SCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred CCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence 3568999999999887642 25789999988765543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=182.55 Aligned_cols=231 Identities=18% Similarity=0.119 Sum_probs=165.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
..+++|+||||||+|+||+++++.|+++ +++|++++|.... +..+.. .....++.++.+|++|.+.+.+++..
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNA--LAELTDEIAGGGGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHH--HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999 6889999886421 111111 11235688999999999998887742
Q ss_pred ----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... ..+.+++...+++|+.|+.++++++... ....++|++||...+...
T Consensus 80 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 152 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG------- 152 (280)
T ss_dssp HHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC-------
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC-------
Confidence 379999999997532 2233456678999999999999877532 124699999998775211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
..+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.+|.... ....+..........+
T Consensus 153 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p--------- 217 (280)
T 3tox_A 153 ------FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA--------- 217 (280)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------
Confidence 1124579999999999999988764 8999999999999986421 0111122222222221
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRV 258 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~ 258 (668)
...+.+++|+|++++.++... ..|+.+++.+|..++.
T Consensus 218 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 218 LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 124678999999999988754 2588999998876543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-20 Score=179.39 Aligned_cols=219 Identities=18% Similarity=0.116 Sum_probs=157.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|+||||||+|+||+++++.|+++ +++|++.+|.... . .....+.+|++|.+.+.++++.
T Consensus 23 m~~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~--~---------~~~~~~~~Dv~~~~~~~~~~~~~~ 89 (266)
T 3uxy_A 23 MQGFEGKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAG--I---------AADLHLPGDLREAAYADGLPGAVA 89 (266)
T ss_dssp ---CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTT--S---------CCSEECCCCTTSHHHHHHHHHHHH
T ss_pred hhCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--H---------HhhhccCcCCCCHHHHHHHHHHHH
Confidence 33456789999999999999999999999 6899999885321 1 1123458999999988776642
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.|+.++++++ ++.+ ..++|++||...+....
T Consensus 90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------- 161 (266)
T 3uxy_A 90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGP------- 161 (266)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCT-------
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCC-------
Confidence 3799999999986532 233445678899999999999987 4434 57999999987654322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC-----CChHHHHHHHHHcCCCceeecCC
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++.... ..............
T Consensus 162 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--------- 225 (266)
T 3uxy_A 162 -------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT--------- 225 (266)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT---------
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc---------
Confidence 24579999999999999887664 8999999999999873210 00011111222221
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.....+.+++|+|++++.++... ..|+.+++.+|..+
T Consensus 226 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3uxy_A 226 VPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV 265 (266)
T ss_dssp STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence 12235779999999999988754 24789999988754
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-21 Score=181.09 Aligned_cols=180 Identities=11% Similarity=0.087 Sum_probs=136.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|+|+||||+||||++++++|+++|++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~vi~~a~~~--- 78 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ--DAVIVLLGTR--- 78 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC--SEEEECCCCT---
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCC--CEEEECccCC---
Confidence 799999999999999999999999864 34567899999999999876 9999999966
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
.. ....++|+.++.+++++|++.++ +++++||..+|+.....| . +.+.|+.+|..+|+
T Consensus 79 ~~-------~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------------~-~~~~y~~~K~~~e~ 137 (206)
T 1hdo_A 79 ND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------------P-RLQAVTDDHIRMHK 137 (206)
T ss_dssp TC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------------G-GGHHHHHHHHHHHH
T ss_pred CC-------CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------------c-cchhHHHHHHHHHH
Confidence 11 12235899999999999999988 677888888775432211 1 44789999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecC-CCcccHhhHHHHHHHHHhcc--CCceeeecCCC
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIP-NSMTVLDELLPISIEMAKRN--LRGIWNFTNPG 596 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~ 596 (668)
+++. .+++++++||+.+ ++......+... ....+ .++++++|+|++++.+++++ .+++||++++.
T Consensus 138 ~~~~----~~i~~~~lrp~~~-~~~~~~~~~~~~--~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 138 VLRE----SGLKYVAVMPPHI-GDQPLTGAYTVT--LDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp HHHH----TCSEEEEECCSEE-ECCCCCSCCEEE--SSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred HHHh----CCCCEEEEeCCcc-cCCCCCcceEec--ccCCCCCCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 9865 4789999999887 222110011000 01122 58999999999999999875 46799999874
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=182.46 Aligned_cols=222 Identities=15% Similarity=0.106 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcC-CCccCCccccCCCc---CCCCeEEEEccCCCH----HHHHHH
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK-LDYCSNLKNLIPSK---ASSNFKFVKGDIASA----DLVNFL 75 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~----~~~~~~ 75 (668)
|++|+||||||+|+||++++++|+++ +++|++++| ... ....+.... ...++.++.+|++|. +.+.++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 84 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEG--AAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI 84 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChH--HHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHH
Confidence 55689999999999999999999999 688999888 421 111111100 034688999999999 888777
Q ss_pred hcc-----CCCCEEEEcCccCCcc----ccc-----------CChHHHHHHHHHHHHHHHHHHHHcC--CC------cEE
Q 005949 76 LIT-----ESIDTIMHFAAQTHVD----NSF-----------GNSFEFTKNNIYGTHVLLEACKVTG--QI------RRF 127 (668)
Q Consensus 76 ~~~-----~~~d~Vih~a~~~~~~----~~~-----------~~~~~~~~~nv~~~~~l~~~~~~~~--~~------~~~ 127 (668)
+.. .++|+|||+||..... ... +++...+++|+.++.++++++...- .. .++
T Consensus 85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~i 164 (276)
T 1mxh_A 85 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV 164 (276)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 642 2799999999975422 112 3455789999999999999887631 13 799
Q ss_pred EEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHH
Q 005949 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFI 204 (668)
Q Consensus 128 v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~ 204 (668)
|++||...+.+.. +...|+.+|...+.+.+.++.+. ++++.+++||.|.+| . ...+...
T Consensus 165 v~isS~~~~~~~~--------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~---~~~~~~~ 226 (276)
T 1mxh_A 165 VNLCDAMTDLPLP--------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P---AMPQETQ 226 (276)
T ss_dssp EEECCGGGGSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S---SSCHHHH
T ss_pred EEECchhhcCCCC--------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c---cCCHHHH
Confidence 9999988765432 24579999999999999887654 899999999999999 3 1212333
Q ss_pred HHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 205 LLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
.......+ + .+.+.+++|+|++++.++.... .|+.+++.+|..
T Consensus 227 ~~~~~~~p--~------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 227 EEYRRKVP--L------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp HHHHTTCT--T------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhcCC--C------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 33332211 1 1227899999999999886532 478899987753
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=183.04 Aligned_cols=221 Identities=13% Similarity=0.117 Sum_probs=156.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... ...+.. .....++.++.+|++|.+.+.+++..
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKS--CDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHH--HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHH--HHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999998 6888888775321 111110 01134688999999999998887742
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ .++||++||...+.+..
T Consensus 118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------- 188 (285)
T 2c07_A 118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV-------- 188 (285)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT--------
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC--------
Confidence 3799999999976422 2334556789999999888877665 334 68999999986653321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...|.+++.++.+. ++++++++||.+.++.... ..+.+........+ ...+
T Consensus 189 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~ 251 (285)
T 2c07_A 189 ------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK--ISEQIKKNIISNIP---------AGRM 251 (285)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCT---------TSSC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh--cCHHHHHHHHhhCC---------CCCC
Confidence 24569999999999998887653 8999999999999885421 11223232222211 1237
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
++++|+|++++.++..+ ..|+.+++.+|.
T Consensus 252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 252 GTPEEVANLACFLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence 89999999999888653 257889998764
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=183.20 Aligned_cols=219 Identities=16% Similarity=0.145 Sum_probs=153.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCCC--cCCCCeEE-EEccCCCHHHHHHHhcc---
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPS--KASSNFKF-VKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~-~~~Dl~d~~~~~~~~~~--- 78 (668)
+|+||||||+|+||++++++|+++ +++|+++ +|.... ...+... ....++.. +.+|++|.+.+.+++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREK--AEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHH--HHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHH--HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 468999999999999999999998 6888887 664321 1111000 01234566 89999999998887642
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHH----HHHHHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLL----EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.++.++. +.+++.+ .++||++||...+.+..
T Consensus 77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------- 147 (245)
T 2ph3_A 77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNP-------- 147 (245)
T ss_dssp HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCS--------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCC--------
Confidence 479999999997542 1233445678899999955555 4555545 68999999976543221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...|.+.+.++.+. +++++++|||.++++.... ..+.+........+ ...+
T Consensus 148 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~ 210 (245)
T 2ph3_A 148 ------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER--LPQEVKEAYLKQIP---------AGRF 210 (245)
T ss_dssp ------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHHHHHHHTCT---------TCSC
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh--cCHHHHHHHHhcCC---------CCCC
Confidence 23579999999999999887654 8999999999999874321 11222222222211 1247
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
++++|+|++++.++..+ ..++.|++.+|.
T Consensus 211 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 211 GRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 89999999999988653 247889998764
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-20 Score=180.07 Aligned_cols=225 Identities=14% Similarity=0.089 Sum_probs=157.9
Q ss_pred CCCCCeEEEEcCCC-hhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 3 TYTPKNILITGAAG-FIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG-~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
.+++|+||||||+| .||++++++|+++ +++|++++|...... ...+ ......++.++.+|++|.+.+.++++.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQL-ADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-HTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHH-HhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 35678999999998 5999999999999 788999988642110 1111 111235799999999999998887743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...++|++||...+....
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------ 169 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH------ 169 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT------
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC------
Confidence 3799999999975432 233445678999999999999887653 2357899999977654322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|.+.+.+++.++.+ .++++.+++||.|.++...... ....... ........
T Consensus 170 --------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~---------~~~~~~~~ 231 (266)
T 3o38_A 170 --------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS-SSELLDR---------LASDEAFG 231 (266)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------------CCTTS
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC-cHHHHHH---------HHhcCCcC
Confidence 3457999999999999988765 5899999999999987532110 0111111 11122234
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 232 r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 232 RAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence 5779999999999988753 357889998764
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=183.64 Aligned_cols=221 Identities=16% Similarity=0.130 Sum_probs=134.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... ...+.. .....++.++.+|++|.+++.+++..
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEA--AEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 6889999886421 111111 11234688999999999998887743
Q ss_pred --CCCCEEEEcCccCCc-------ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 --ESIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.++.++.+++ ++.+ ..++|++||...|..
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~------- 154 (253)
T 3qiv_A 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWLY------- 154 (253)
T ss_dssp HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------------
T ss_pred HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccCC-------
Confidence 289999999997421 1233445678999999966666554 4434 579999999887621
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
...|+.+|.+.+.+.+.++.++ ++++.+++||.|+++..... ....+.....++. ..
T Consensus 155 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~---------~~ 214 (253)
T 3qiv_A 155 ----------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT-TPKEMVDDIVKGL---------PL 214 (253)
T ss_dssp ---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc-CcHHHHHHHhccC---------CC
Confidence 3459999999999999988775 79999999999999854211 1111122211211 22
Q ss_pred EeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCcc
Q 005949 223 RSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKER 256 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~ 256 (668)
..+.+++|++++++.++.... .|+.|++.+|..+
T Consensus 215 ~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~ 251 (253)
T 3qiv_A 215 SRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQII 251 (253)
T ss_dssp -----CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred CCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence 235577899999998886532 5889999988654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=185.11 Aligned_cols=226 Identities=16% Similarity=0.120 Sum_probs=162.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC--CCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++.+|..... ..... ......++.++.+|++|.+.+.++++.
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGD-ANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 68898888864211 11000 011235788999999999998877743
Q ss_pred --CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 191 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE---------- 191 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT----------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC----------
Confidence 3799999999975422 1344567899999999999999987641 235999999988765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++..... .-....... ........+.+
T Consensus 192 ----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~---------~~~~p~~r~~~ 257 (291)
T 3ijr_A 192 ----TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS-FDEKKVSQF---------GSNVPMQRPGQ 257 (291)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH-SCHHHHHHT---------TTTSTTSSCBC
T ss_pred ----CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc-CCHHHHHHH---------HccCCCCCCcC
Confidence 23569999999999999987764 89999999999998742100 000111111 11122335678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
++|+|++++.++... ..|+.+++.+|..+
T Consensus 258 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 258 PYELAPAYVYLASSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp GGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred HHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence 999999999888653 35789999887543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=183.13 Aligned_cols=223 Identities=17% Similarity=0.190 Sum_probs=151.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++||||||+|+||++++++|+++ +++|++. +|... ..+.+.. .....++.++.+|++|.+.+.++++.
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANRE--AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDR 100 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChh--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999 6788776 44321 1111110 11234688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHc------CCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 --ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT------GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... .+.+++...+++|+.++.++++++... +...+||++||...+.....
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 176 (272)
T 4e3z_A 101 QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT---- 176 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT----
T ss_pred hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC----
Confidence 2799999999976431 133456678999999999999877643 12468999999776543221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|.+.+.+++.++.++ ++++.+++||.|.++..... ..+......... ...
T Consensus 177 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------~~~ 237 (272)
T 4e3z_A 177 ---------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPS---------VPM 237 (272)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------C---------CTT
T ss_pred ---------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhhc---------CCc
Confidence 13459999999999999887664 89999999999998854221 111111111111 122
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+.+++|+|++++.++... ..|+.|++.+|.
T Consensus 238 ~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 238 QRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR 272 (272)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence 24568999999999988643 357899998763
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.7e-20 Score=177.80 Aligned_cols=229 Identities=16% Similarity=0.116 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++|+||||||+|+||+++++.|+++ +++|++++|.........+. ....++.++.+|++|.+.+.+++..
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIA--RHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHH--TTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHH--hcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 68899988864311111111 1134688899999999998888742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ .+++|++||...+....
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 146 (255)
T 2q2v_A 78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGST---------- 146 (255)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCC----------
Confidence 2799999999975422 223445678899999777766654 4544 68999999987765432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCC---ceee-cCCCceE
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLP---LPIH-GDGSNVR 223 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~ 223 (668)
+...|+.+|...+.+.+.++.+. ++++++++||.|++|... ...... .. ..+.. .... .......
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~-~~-~~~~~~~~~~~~~~~~~p~~ 218 (255)
T 2q2v_A 147 ----GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ--KQIDDR-AA-NGGDPLQAQHDLLAEKQPSL 218 (255)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH--HHHHHH-HH-HTCCHHHHHHHHHTTTCTTC
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh--hhcccc-cc-cccchHHHHHHHHhccCCCC
Confidence 23569999999999999988763 799999999999987431 111000 00 00000 0000 1111233
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+++++|+|++++.++..+ ..|+.|++.+|..
T Consensus 219 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 219 AFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 5889999999999888653 2478999987753
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=9e-20 Score=179.79 Aligned_cols=224 Identities=12% Similarity=0.047 Sum_probs=157.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||+++++.|+++ +++|++++|... .+...... ....++..+.+|++|.+.+.++++.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEK--ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 688999988642 11111100 1134688999999999998887742
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ .+++|++||...+....
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------- 166 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP------- 166 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT-------
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCC-------
Confidence 4799999999975422 2234456788899999999998873 333 57999999988875432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh----HHHHHHHHHcCCCceeecCCC
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL----IPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.|+++....... ............+
T Consensus 167 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-------- 231 (273)
T 1ae1_A 167 -------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP-------- 231 (273)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST--------
T ss_pred -------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC--------
Confidence 24579999999999999887654 8999999999999986421000 0111111111111
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
...+.+.+|+|++++.++... ..|+.+++.+|..
T Consensus 232 -~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 232 -MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp -TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 123678999999999888643 2578899988753
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=183.10 Aligned_cols=225 Identities=15% Similarity=0.140 Sum_probs=160.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCc-cccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL-KNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++|++|||||+|+||+++++.|+++ +++|++++|....... ..+ .....++.++.+|++|.+.+.++.+.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEI--ADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHH--HTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHH--HhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 45789999999999999999999999 6789888865321111 011 11234688999999999988776421
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++. +.+ ..++|++||...+.+..
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~---------- 173 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGR---------- 173 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS----------
T ss_pred CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCC----------
Confidence 37999999999765322 334456789999999999998773 334 57999999987764432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++...................+ ...+.+
T Consensus 174 ----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~ 240 (273)
T 3uf0_A 174 ----NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP---------AGRWAT 240 (273)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST---------TSSCBC
T ss_pred ----CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC---------CCCCCC
Confidence 2457999999999999998876 589999999999998754110000111122222111 124668
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
++|+|++++.++... ..|+.+++.+|...
T Consensus 241 pedva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 241 PEDMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 899999999988653 35889999988654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=181.46 Aligned_cols=226 Identities=14% Similarity=0.104 Sum_probs=158.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
|..+++|+||||||+|+||++++++|+++ +++|++++|.... ....... ....++.++.+|++|.+.+.+++..
T Consensus 1 ~~~~~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (251)
T 1zk4_A 1 SNRLDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDV--GEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76 (251)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHhhccCceEEEECCCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999 6889998886421 1111100 0114689999999999998887743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCC-cEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQI-RRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~-~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+.+ ++.+ . ++||++||...+.+..
T Consensus 77 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~----- 150 (251)
T 1zk4_A 77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDP----- 150 (251)
T ss_dssp HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCT-----
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCC-----
Confidence 3699999999975422 223345678899999887766654 3433 4 7999999988765432
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHH-----hcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGR-----SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|...|.+++.++. ..+++++++|||.++++...... ...... ..... .
T Consensus 151 ---------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~-~~~~~-------~ 211 (251)
T 1zk4_A 151 ---------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP--GAEEAM-SQRTK-------T 211 (251)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST--THHHHH-TSTTT-------C
T ss_pred ---------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC--chhhhH-HHhhc-------C
Confidence 245799999999999988765 45799999999999987432110 011111 01111 1
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
....+++++|+|++++.++... ..|+.+++.+|..
T Consensus 212 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 212 PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence 1234789999999999988653 2478899998754
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-20 Score=190.38 Aligned_cols=206 Identities=16% Similarity=0.212 Sum_probs=153.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
||+|+|||||||||+++++.|+++|++|. ++.+|++|++++.++++++ |+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV--DVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC--CEEE
Confidence 57899999999999999999999998652 3457888999999999876 9999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC-CCc
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT-GSF 514 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~-~~~ 514 (668)
|+++.. .. ..|+.++.+++++|++.+ ++.+++| +|+..... . +.+..| .+.
T Consensus 82 ~~a~~~---~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~S---~~g~~~~~--------~--~~~~~p~~~~ 134 (313)
T 1qyd_A 82 SALAGG---VL-----------SHHILEQLKLVEAIKEAGNIKRFLPS---EFGMDPDI--------M--EHALQPGSIT 134 (313)
T ss_dssp ECCCCS---SS-----------STTTTTHHHHHHHHHHSCCCSEEECS---CCSSCTTS--------C--CCCCSSTTHH
T ss_pred ECCccc---cc-----------hhhHHHHHHHHHHHHhcCCCceEEec---CCcCCccc--------c--ccCCCCCcch
Confidence 999965 11 237899999999999998 8766642 45432211 0 122223 456
Q ss_pred chhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhh--------cccceeec-----CCCcccHhhHHHHHHHH
Q 005949 515 YSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS--------RYNKVVNI-----PNSMTVLDELLPISIEM 581 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~--------~~~~~~~~-----~~~~~~v~D~a~~~~~~ 581 (668)
| .+|..+|++++. .+++++++|++.++++. ...+. ..+..... ..++++++|+|+++..+
T Consensus 135 y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~ 207 (313)
T 1qyd_A 135 F-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYF--AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS 207 (313)
T ss_dssp H-HHHHHHHHHHHH----TTCCBCEEECCEEHHHH--TTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHh----cCCCeEEEEeceecccc--ccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHH
Confidence 8 999999999975 46889999987666542 22111 11222111 12789999999999999
Q ss_pred Hhcc--CCceeeecCC-CccCHHHHHHHHHhhcCCCCCCCCCCHHH
Q 005949 582 AKRN--LRGIWNFTNP-GVVSHNEILEMYKKYINPEFKWVNFTLEE 624 (668)
Q Consensus 582 ~~~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 624 (668)
+.++ .+++|+++++ +.+|+.|+++.+.+.+|.+..+..++..+
T Consensus 208 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 253 (313)
T 1qyd_A 208 IDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 253 (313)
T ss_dssp TTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred HhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCHHH
Confidence 9875 4667888765 78999999999999999998777776443
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=179.41 Aligned_cols=229 Identities=15% Similarity=0.105 Sum_probs=166.3
Q ss_pred CCCCCCCeEEEEcCCCh--hHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGF--IASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~--iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++|+||||||+|+ ||++++++|+++ +++|++++|......++.+... ..++.++.+|++|.+++.++++.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAE--FNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGG--GCCSEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHh--cCCceEEEeecCCHHHHHHHHHH
Confidence 56677899999999977 999999999999 6889998886421222222111 23588999999999998887743
Q ss_pred -----CCCCEEEEcCccCCcc---------cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCC
Q 005949 79 -----ESIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~ 142 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 174 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP-- 174 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT--
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC--
Confidence 3799999999986531 334455678999999999999988653 1246999999987754322
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++..........+........+.
T Consensus 175 ------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------ 236 (280)
T 3nrc_A 175 ------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------ 236 (280)
T ss_dssp ------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT------
T ss_pred ------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC------
Confidence 2457999999999999987765 4899999999999988653222223333333222221
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
..+...+|+|++++.++... ..|+.+++.+|...
T Consensus 237 ---~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 237 ---KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC 273 (280)
T ss_dssp ---CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred ---CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence 23568999999999988653 35889999987643
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.9e-20 Score=180.93 Aligned_cols=228 Identities=16% Similarity=0.037 Sum_probs=162.1
Q ss_pred CCCCCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|+.+++|+||||||+ |+||+++++.|+++ +++|++++|..... ....+... ..++.++.+|++|.+.+.++++
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~ 76 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYN 76 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEcCCCCHHHHHHHHH
Confidence 777788999999999 99999999999999 68899988864200 11111111 1237889999999999887774
Q ss_pred c-----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~ 143 (668)
. .++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+.+.
T Consensus 77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---- 152 (275)
T 2pd4_A 77 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---- 152 (275)
T ss_dssp HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----
T ss_pred HHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC----
Confidence 3 278999999997642 22334556789999999999999987641 02599999997664322
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
.+...|+.+|...+.+.+.++.++ ++++.+++||.|.++........+.+........++
T Consensus 153 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------- 215 (275)
T 2pd4_A 153 ----------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------- 215 (275)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-------
T ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc-------
Confidence 124569999999999999887664 899999999999998542211122232222222111
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+.+.+|+|++++.++... ..|+.+++.++..
T Consensus 216 --~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 216 --RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp --SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 12568899999999888642 2577888887753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=177.73 Aligned_cols=224 Identities=17% Similarity=0.156 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|... ....+.... ..++.++.+|++|.+.+.+++..
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNS--GGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTS--SHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcH--hHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 45689999999999999999999999 688999888642 111111111 24688999999999998888742
Q ss_pred CCCCEEEEcCccCCcc----------cccCChHHHHHHHHHHHHHHHHHHHHc---C------CCcEEEEEcCccccCCC
Q 005949 79 ESIDTIMHFAAQTHVD----------NSFGNSFEFTKNNIYGTHVLLEACKVT---G------QIRRFIHVSTDEVYGET 139 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~------~~~~~v~~SS~~vyg~~ 139 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... . ...++|++||...+.+.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 164 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 164 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence 2799999999976432 233446678899999999999988754 0 25799999998776443
Q ss_pred CCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceee
Q 005949 140 DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 140 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (668)
. +...|+.+|...+.+.+.++.+ .++++.+++||.+.++.... .............+ +
T Consensus 165 ~--------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~--~- 225 (265)
T 2o23_A 165 V--------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS--LPEKVCNFLASQVP--F- 225 (265)
T ss_dssp T--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCS--S-
T ss_pred C--------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc--cCHHHHHHHHHcCC--C-
Confidence 2 2457999999999999887765 38999999999999875421 11111111111111 0
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCcc
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKER 256 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~ 256 (668)
...+++.+|+|++++.+++... .++.+++.+|...
T Consensus 226 -----~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 226 -----PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp -----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred -----cCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 0246799999999999887643 5778999877543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=181.68 Aligned_cols=220 Identities=16% Similarity=0.106 Sum_probs=156.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+|+||||||+|+||++++++|+++ +++|+++ +|... ....+... ....++.++.+|++|.+.+.+++..
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAK--AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999 6788884 66431 11111100 0123678899999999998887743
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ...++||++||...+.+..
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 146 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI---------- 146 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC----------
Confidence 2799999999976432 223445678999999999999887653 1268999999976543221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...+.+.+.++.+ .+++++++|||.++++.... ....+........+ ...+++
T Consensus 147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~---------~~~~~~ 211 (244)
T 1edo_A 147 ----GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK--LGEDMEKKILGTIP---------LGRTGQ 211 (244)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT--TCHHHHHHHHTSCT---------TCSCBC
T ss_pred ----CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh--cChHHHHHHhhcCC---------CCCCCC
Confidence 2457999999999999887765 48999999999999874321 11222222222211 124789
Q ss_pred HHHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG----EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~----~~~~~~ni~~~~ 254 (668)
++|+|++++.++..+ ..|+.|++.+|.
T Consensus 212 ~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 212 PENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence 999999999888433 247889998764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.7e-20 Score=178.69 Aligned_cols=232 Identities=10% Similarity=-0.005 Sum_probs=155.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc----CCCCeEEEEccCCCHHHHHHHhc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK----ASSNFKFVKGDIASADLVNFLLI-- 77 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~-- 77 (668)
+++|+||||||+|+||++++++|+++ +++|++++|... ....+.... ...++.++.+|++|.+.+.+++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARN--GARLLLFSRNRE--KLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 45789999999999999999999999 678999888532 111111100 02268899999999999887774
Q ss_pred --cCCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 78 --TESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 78 --~~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
..++|+|||+||..... ...+++...+++|+.++.++.+++. +.+ .+++|++||...+....
T Consensus 81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 152 (260)
T 2z1n_A 81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQ------- 152 (260)
T ss_dssp HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCC-------
Confidence 22599999999975421 2334556789999999977766553 434 68999999988765432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|+++................................
T Consensus 153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 225 (260)
T 2z1n_A 153 -------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGR 225 (260)
T ss_dssp -------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSS
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCC
Confidence 24579999999999999887654 89999999999999864310000000000000000000000111124
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 226 ~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 226 VGKPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred ccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 679999999999988653 257789988764
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-20 Score=190.87 Aligned_cols=199 Identities=15% Similarity=0.139 Sum_probs=149.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc---------------------ccccc-cCChhHHHHHhhhcCCCEEEEccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------YGKGR-LEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------~~~~D-~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
+|+|+|||||||||+++++.|+++|++|. ++.+| ++|++++.++++++ |+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~--d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA--HLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC--SEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcC--CEEEEcCC
Confidence 36899999999999999999999998652 33478 99999999999876 99999987
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcC-C-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
.. . .+.|..+ .+++++|++.+ + ++|++||..+- . +. + .+.+.|+.+
T Consensus 83 ~~-----~---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~------~------~~----~-~~~~~y~~s 130 (352)
T 1xgk_A 83 SQ-----A---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHS------L------YG----P-WPAVPMWAP 130 (352)
T ss_dssp ST-----T---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGG------G------TS----S-CCCCTTTHH
T ss_pred CC-----C---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCcccc------c------cC----C-CCCccHHHH
Confidence 32 0 1347776 99999999999 7 67777775410 0 00 1 122679999
Q ss_pred HHHHHHHHHhccCeeEeEEeeeecCCCCChhhHH--HHh-----hcccce-ee------cCCCcccH-hhHHHHHHHHHh
Q 005949 519 KAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFI--TKI-----SRYNKV-VN------IPNSMTVL-DELLPISIEMAK 583 (668)
Q Consensus 519 K~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~--~~~-----~~~~~~-~~------~~~~~~~v-~D~a~~~~~~~~ 583 (668)
|..+|++++.+ +++++++|+ ++||+...- ..+ ...+.. .. ...+++|+ +|+|++++.+++
T Consensus 131 K~~~E~~~~~~----gi~~~ivrp-g~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~ 205 (352)
T 1xgk_A 131 KFTVENYVRQL----GLPSTFVYA-GIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK 205 (352)
T ss_dssp HHHHHHHHHTS----SSCEEEEEE-CEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc----CCCEEEEec-ceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHh
Confidence 99999999874 789999996 578875210 001 112221 11 12278999 899999999998
Q ss_pred cc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCC
Q 005949 584 RN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFT 621 (668)
Q Consensus 584 ~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 621 (668)
++ .+++||+++ +.+|+.|+++.+.+.+|.+..+..+|
T Consensus 206 ~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 206 DGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP 246 (352)
T ss_dssp HCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred CCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECC
Confidence 64 478999996 77999999999999999987665555
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-19 Score=175.95 Aligned_cols=221 Identities=19% Similarity=0.146 Sum_probs=155.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 82 (668)
..+++||||||+|+||+++++.|+++ +++|++.+|... .+..+... ...++.++.+|+.|.+.+.+++++. ++|
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEE--KLKSLGNA-LKDNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HCSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHHH-hccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 45789999999999999999999999 688999988532 11111111 1246889999999999999888654 799
Q ss_pred EEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|||+||.... ....+++...+++|+.++.++++++.. .+ ..++|++||...+....
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------- 151 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNP-------------- 151 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCS--------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCC--------------
Confidence 99999997542 234566788999999999999887642 23 57999999987764432
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+...|+.+|.+.+.+++.++.+ .++++.+++||.|.++.... ...........+. ....+.+++|+
T Consensus 152 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~dv 220 (249)
T 3f9i_A 152 GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK--LNEKQREAIVQKI---------PLGTYGIPEDV 220 (249)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC--------CCHHHHHHHHHHC---------TTCSCBCHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc--cCHHHHHHHHhcC---------CCCCCcCHHHH
Confidence 2457999999999999988765 48999999999999875422 1122222222211 22357789999
Q ss_pred HHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 232 AEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 232 a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
|++++.++.... .|+.|++.+|..
T Consensus 221 a~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 221 AYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHcCCccCCccCcEEEECCCEe
Confidence 999999887542 578999998753
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.2e-20 Score=181.34 Aligned_cols=226 Identities=16% Similarity=0.125 Sum_probs=150.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++|++|||||+|+||+++++.|+++ +++|+++++.... ....... .....++.++.+|++|.+++.++++.
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAE-GVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHH-HHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 7889888864321 1111110 11235789999999999988877743
Q ss_pred ---CCCCEEEEcCccCC--c----ccccCChHHHHHHHHHHHHHHHHHHHHc----C--CCcEEEEEcCccccCCCCCCc
Q 005949 79 ---ESIDTIMHFAAQTH--V----DNSFGNSFEFTKNNIYGTHVLLEACKVT----G--QIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~~v~~SS~~vyg~~~~~~ 143 (668)
.++|+|||+||... . ..+.+++...+++|+.++.++++++... + ...++|++||...+....
T Consensus 103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~--- 179 (280)
T 4da9_A 103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP--- 179 (280)
T ss_dssp HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC---
Confidence 27999999999732 1 1234456678899999999988877543 1 135899999977654322
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++.... ........... ...
T Consensus 180 -----------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~--------~~~ 238 (280)
T 4da9_A 180 -----------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA--VSGKYDGLIES--------GLV 238 (280)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------
T ss_pred -----------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh--cchhHHHHHhh--------cCC
Confidence 2356999999999999998876 48999999999999875421 11111111111 011
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
....+..++|+|++++.++.... .|+.+++.+|..
T Consensus 239 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (280)
T 4da9_A 239 PMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS 276 (280)
T ss_dssp ---CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred CcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 22357789999999999887643 578999998764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-20 Score=179.13 Aligned_cols=225 Identities=14% Similarity=0.174 Sum_probs=161.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||+++++.|+++ +++|++.+|... .++.+.. .....++.++.+|++|.+++.+++..
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVE--RLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 688999988532 1111111 11235789999999999998887743
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ..+.+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 155 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA--------- 155 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT---------
T ss_pred HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC---------
Confidence 379999999987422 22334566789999999999998765321 016999999987754432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC---------ChHHHHHHHHHcCCCceeec
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE---------KLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 217 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|++|..... .....+......+
T Consensus 156 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 223 (264)
T 3ucx_A 156 -----KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAG------- 223 (264)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTT-------
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhcc-------
Confidence 2457999999999999998876 589999999999998743100 0011122222222
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.....+.+++|+|++++.++... ..|+.+++.+|..
T Consensus 224 --~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 224 --SDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp --SSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred --CCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 22335779999999999888643 3588999998764
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=191.33 Aligned_cols=241 Identities=17% Similarity=0.265 Sum_probs=168.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
||++|+||||||+||+++++.|+++|++| .++.+|++|++++.++++++ |+|||+|
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~--d~vi~~a 87 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKV--DVVISAL 87 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCC--CEEEECC
Confidence 44589999999999999999999999854 24557889999999999976 9999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC-CCcchh
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT-GSFYSK 517 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~-~~~Y~~ 517 (668)
+.. ++.++.+++++|++.+ ++.+++| +|+.. .++..+..| .+.| .
T Consensus 88 ~~~------------------~~~~~~~l~~aa~~~g~v~~~v~S---~~g~~-----------~~~~~~~~p~~~~y-~ 134 (318)
T 2r6j_A 88 AFP------------------QILDQFKILEAIKVAGNIKRFLPS---DFGVE-----------EDRINALPPFEALI-E 134 (318)
T ss_dssp CGG------------------GSTTHHHHHHHHHHHCCCCEEECS---CCSSC-----------TTTCCCCHHHHHHH-H
T ss_pred chh------------------hhHHHHHHHHHHHhcCCCCEEEee---ccccC-----------cccccCCCCcchhH-H
Confidence 844 1567899999999998 8766653 34321 111222223 3568 9
Q ss_pred hHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhh----cccceeec-----CCCcccHhhHHHHHHHHHhcc--C
Q 005949 518 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS----RYNKVVNI-----PNSMTVLDELLPISIEMAKRN--L 586 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~----~~~~~~~~-----~~~~~~v~D~a~~~~~~~~~~--~ 586 (668)
+|..+|++++. .+++++++|++.+++. ++..+. ..+..... ..++++++|+++++..++.++ .
T Consensus 135 sK~~~e~~~~~----~~~~~~~lr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~ 208 (318)
T 2r6j_A 135 RKRMIRRAIEE----ANIPYTYVSANCFASY--FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL 208 (318)
T ss_dssp HHHHHHHHHHH----TTCCBEEEECCEEHHH--HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT
T ss_pred HHHHHHHHHHh----cCCCeEEEEcceehhh--hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc
Confidence 99999999976 4688899998655543 333322 22222222 227899999999999999865 3
Q ss_pred CceeeecC-CCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhc------------------cCCC-CCccCh--hHHH
Q 005949 587 RGIWNFTN-PGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIV------------------APRS-NNEMDA--SKLK 644 (668)
Q Consensus 587 ~g~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~------------------~~~~-~~~ld~--~k~~ 644 (668)
+++|++++ ++.+|+.|+++.+.+.+|.++.+..++..+...... .... ...++. -.++
T Consensus 209 ~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (318)
T 2r6j_A 209 NRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKENDVEAS 288 (318)
T ss_dssp TEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHHHHHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTTCEEGG
T ss_pred CeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHHHHHHHhcCCCcchhhhheeeeEEecCCCCCCCcccccchHH
Confidence 56788875 488999999999999999998777666543311100 0000 011211 1355
Q ss_pred hhcC--CccChHHHHHHHHhc
Q 005949 645 KEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 645 ~~~g--~~~~~~~~l~~~~~~ 663 (668)
+++. +.+++++-|++.++.
T Consensus 289 ~~~p~~~~~~~~~~l~~~~~~ 309 (318)
T 2r6j_A 289 TLYPELKFTTIDELLDIFVHD 309 (318)
T ss_dssp GTCTTCCCCCHHHHHHHHHHS
T ss_pred HhCCCCccccHHHHHHHHhcC
Confidence 6663 668999999888765
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-20 Score=180.53 Aligned_cols=223 Identities=16% Similarity=0.105 Sum_probs=156.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|+||||||+|+||++++++|+++ +++|++.+|... .+..+.. ....++.++.+|++|.+.+.++++.
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTRED--KLKEIAA-DLGKDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH-HhCCceEEEEeecCCHHHHHHHHHHHH
Confidence 44456789999999999999999999999 688988888532 1111111 1134688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....+++...+++|+.++.++.+++ ++.+ ..++|++||...+....
T Consensus 97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~------- 168 (266)
T 3grp_A 97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNP------- 168 (266)
T ss_dssp HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC--------------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCC-------
Confidence 379999999997542 2233456678899999977766655 3334 57999999976653321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++.... .............+ ...
T Consensus 169 -------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p---------~~r 230 (266)
T 3grp_A 169 -------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK--LNEKQKEAIMAMIP---------MKR 230 (266)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT--CCHHHHHHHHTTCT---------TCS
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc--cCHHHHHHHHhcCC---------CCC
Confidence 2356999999999999988765 38999999999998874311 11222333333222 234
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 231 ~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 231 MGIGEEIAFATVYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence 678999999999888653 257899998775
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=178.76 Aligned_cols=230 Identities=17% Similarity=0.076 Sum_probs=160.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++++|.... +..... .....++.++.+|++|.+.+.+++..
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTE--VEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6889999886421 111111 11234688999999999998887743
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... +...+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~------- 173 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFT------- 173 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC-------
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCC-------
Confidence 379999999997532 2233445678999999999999887 4444 57999999976643211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce--
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV-- 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (668)
..+...|+.+|.+.+.+.+.++.+ .++++.+++||.|..+............ ...+..........
T Consensus 174 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~ 244 (283)
T 3v8b_A 174 -----TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEE----TAIPVEWPKGQVPITD 244 (283)
T ss_dssp -----STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHH----HSCCCBCTTCSCGGGT
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchh----hhhhhhhhhhcCcccc
Confidence 123457999999999999998876 3799999999999988653211100000 00001111111111
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+...+|+|++++.++... ..|+.+++.+|.
T Consensus 245 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 245 GQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp TCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred CCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence 24678999999999988643 257889998774
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-20 Score=184.15 Aligned_cols=228 Identities=12% Similarity=0.103 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.++.......+.+.. .....++.++.+|++|.+.+.++++.
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 688888877522111111111 11235788999999999988877642
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~---------- 194 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP---------- 194 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT----------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC----------
Confidence 379999999997542 12344566799999999999999987643 124999999988876533
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++............. ..........+..
T Consensus 195 ----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~---------~~~~~~p~~r~~~ 261 (294)
T 3r3s_A 195 ----HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP---------QFGQQTPMKRAGQ 261 (294)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGST---------TTTTTSTTSSCBC
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHH---------HHHhcCCCCCCcC
Confidence 24569999999999999987764 8999999999999874100000000000 0111112234678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+|+|++++.++... ..|+++++.+|..+
T Consensus 262 p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 262 PAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 899999999888643 35789999988654
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=174.98 Aligned_cols=222 Identities=15% Similarity=0.098 Sum_probs=156.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.|++|+||||||+|+||+++++.|+++ +++|++++|... ....+.... ..++.++.+|++|.+.+.++++.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDE--EGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 688999888642 111111111 23578899999999998887742
Q ss_pred -CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHH----HHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLL----EACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ....+++...+++|+.++.++. +.+++.+ .+++|++||...+.+..
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 146 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA--------- 146 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC---------
Confidence 279999999997542 1233445678899999998554 4455544 68999999987764322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|...+.+.+.++.+ .++++++++||.++++.. .. ... ..............+.
T Consensus 147 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~~----~~~-~~~~~~~~~~p~~~~~ 210 (254)
T 1hdc_A 147 -----LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT------AE----TGI-RQGEGNYPNTPMGRVG 210 (254)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HH----HTC-CCSTTSCTTSTTSSCB
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc------cc----cch-hHHHHHHhcCCCCCCC
Confidence 2457999999999999988765 389999999999998632 11 110 0000000111112367
Q ss_pred -eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 227 -YCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 227 -~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+.+|+|++++.++..+ ..|+.+++.+|..
T Consensus 211 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 211 NEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp -CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 8999999999988653 3578899987753
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=7.8e-20 Score=178.85 Aligned_cols=225 Identities=18% Similarity=0.156 Sum_probs=162.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|++|||||+|+||+++++.|+++ +++|++++|... .+....... ..++.++.+|++|.+++.++++.
T Consensus 1 m~~l~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 1 MGRLSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREER--LLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHH
Confidence 67778899999999999999999999999 688999988642 111111111 14688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+ ...
T Consensus 76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~---------- 144 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF---------- 144 (263)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH----------
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC----------
Confidence 3789999999975432 1223445788999999999999887642 13699999998877 211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++.... ..+..........+. ..+.+
T Consensus 145 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~---------~~~~~ 209 (263)
T 2a4k_A 145 ----GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG--LPPWAWEQEVGASPL---------GRAGR 209 (263)
T ss_dssp ----HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT--SCHHHHHHHHHTSTT---------CSCBC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh--cCHHHHHHHHhcCCC---------CCCcC
Confidence 1346999999999999887765 38999999999999885422 112222222222111 13678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+|+|++++.++... ..|+.+++.+|...
T Consensus 210 p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 210 PEEVAQAALFLLSEESAYITGQALYVDGGRSI 241 (263)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence 999999999988653 35788999887643
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-20 Score=189.10 Aligned_cols=241 Identities=17% Similarity=0.138 Sum_probs=170.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCc--------cCCccccCC--CcCCCCeEEEEccCCCHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY--------CSNLKNLIP--SKASSNFKFVKGDIASAD 70 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~--------~~~~~~~~~--~~~~~~~~~~~~Dl~d~~ 70 (668)
|..+++++||||||+|+||+++++.|+++ +++|++++|... ......... .....++.++.+|++|.+
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 99 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD 99 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 44456789999999999999999999999 689999887510 011111111 012346788999999999
Q ss_pred HHHHHhcc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCC---------CcEEEEEcC
Q 005949 71 LVNFLLIT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQ---------IRRFIHVST 132 (668)
Q Consensus 71 ~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---------~~~~v~~SS 132 (668)
++.+++.. .++|+|||+||..... ...+++...+++|+.++.++++++...-. -.++|++||
T Consensus 100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS 179 (322)
T 3qlj_A 100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS 179 (322)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence 98887743 2799999999976532 23445667899999999999988754210 149999999
Q ss_pred ccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc
Q 005949 133 DEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR 209 (668)
Q Consensus 133 ~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 209 (668)
...+.... +...|+.+|.+.+.+.+.++.+ +++++.+++|| +..+.... ......
T Consensus 180 ~~~~~~~~--------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~--~~~~~~----- 237 (322)
T 3qlj_A 180 GAGLQGSV--------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET--VFAEMM----- 237 (322)
T ss_dssp HHHHHCBT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC--SCCC-------
T ss_pred HHHccCCC--------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh--hhhhhh-----
Confidence 77653322 2456999999999999998876 58999999999 66554311 100000
Q ss_pred CCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc-----------------cHHHHHHHHHHHh
Q 005949 210 GLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER-----------------RVIDVAKDICKLF 269 (668)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~-----------------s~~el~~~i~~~~ 269 (668)
......+.++.++|+|.+++.++... ..|+.+++.+|... ++.|+++.+.+.+
T Consensus 238 -------~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~ 310 (322)
T 3qlj_A 238 -------ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLL 310 (322)
T ss_dssp -------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHH
T ss_pred -------hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHh
Confidence 01112234568899999999888643 25789999887654 7799999999998
Q ss_pred CCC
Q 005949 270 SMD 272 (668)
Q Consensus 270 g~~ 272 (668)
|.+
T Consensus 311 ~~~ 313 (322)
T 3qlj_A 311 GKA 313 (322)
T ss_dssp HHS
T ss_pred hcc
Confidence 754
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=176.34 Aligned_cols=220 Identities=16% Similarity=0.202 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|..... ...+ ...++.++.+|++|.+.+.++++.
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHAS-VTEL----RQAGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHH-HHHH----HHHTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHH-HHHH----HhcCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 67888888864211 1111 112478999999999998887743
Q ss_pred CCCCEEEEcCccCCccc---ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN---SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++... ....++|++||...+.+..
T Consensus 98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------ 165 (260)
T 3gem_A 98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS------------ 165 (260)
T ss_dssp SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS------------
T ss_pred CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC------------
Confidence 37999999999754322 22334568899999999999877532 2257999999987764432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++...... .........+ ...+..++|
T Consensus 166 --~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~----~~~~~~~~~p---------~~r~~~~ed 230 (260)
T 3gem_A 166 --KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAA----YRANALAKSA---------LGIEPGAEV 230 (260)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CC---------SCCCCCTHH
T ss_pred --CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHH----HHHHHHhcCC---------CCCCCCHHH
Confidence 24579999999999999988765 599999999999887542111 1111111111 123456899
Q ss_pred HHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005949 231 VAEAFECILHKGE-VGHVYNVGTKKERR 257 (668)
Q Consensus 231 ~a~ai~~~~~~~~-~~~~~ni~~~~~~s 257 (668)
+|++++.+++... .|+.+++.+|..++
T Consensus 231 va~~v~~L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 231 IYQSLRYLLDSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp HHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred HHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence 9999998886543 57899999887654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.1e-21 Score=188.54 Aligned_cols=212 Identities=16% Similarity=0.068 Sum_probs=153.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
+++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+||
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv 84 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLV 84 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 3689999999999999999999999864 34568999999998888865 789999
Q ss_pred EcccccCC-CCccccccccccceehhhhh----hHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGR-PNVDWCESHKTDTIRTNVAG----TLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~-~~~~~~~~~~~~~~~~Nv~~----~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||.... +......++....+++|+.| +..++..+++.+. ++|++||...+. +.+
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~ 146 (281)
T 3m1a_A 85 NNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL------------------SFA 146 (281)
T ss_dssp ECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------------------CCT
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC------------------CCC
Confidence 99997611 01122344556788999999 5555555566665 778888865441 223
Q ss_pred CCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChh-------------hHHHHhhccccee--ecCCCcccHh
Q 005949 511 TGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPR-------------NFITKISRYNKVV--NIPNSMTVLD 572 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~-------------~~~~~~~~~~~~~--~~~~~~~~v~ 572 (668)
+.+.|+.||...|.+++.+... .++++..++|+.+.++. .+........... .....+.+++
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (281)
T 3m1a_A 147 GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPA 226 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHH
Confidence 4578999999999999887543 68999999999887663 1121111111111 1123678899
Q ss_pred hHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcC
Q 005949 573 ELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYIN 612 (668)
Q Consensus 573 D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g 612 (668)
|+|++++.+++++ .++.||++++....+.+....+.+.++
T Consensus 227 dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 227 KAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 9999999999876 677999999888888888887777654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=182.82 Aligned_cols=231 Identities=16% Similarity=0.110 Sum_probs=150.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC---ccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|++|+||||||+|+||+++++.|+++ |++|++..|...... ++.+.. .....++..+.+|++|.+++.++++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 45689999999999999999999999 688888777421111 111110 01234689999999999999888743
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... .+.++....+++|+.|+.++++++ ++.+ .+++|++||...+.....
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~---- 155 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPP---- 155 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCS----
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCC----
Confidence 2899999999975422 223445678899999999999988 5544 689999999877643211
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-----CChHHHHHHHHHcCCCceeec
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-----EKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 217 (668)
....|+.+|.+.|.+.+.++.+ +|+++++++||.|.++.... .............. ......
T Consensus 156 ---------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 225 (324)
T 3u9l_A 156 ---------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGP-NAGLGE 225 (324)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTT-TTTHHH
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhcccc-ccCCHH
Confidence 1356999999999999998776 48999999999998764311 11111111111100 000000
Q ss_pred CCC-----ceEeceeHHHHHHHHHHHHhcCC--CCceEEEc
Q 005949 218 DGS-----NVRSYLYCEDVAEAFECILHKGE--VGHVYNVG 251 (668)
Q Consensus 218 ~~~-----~~~~~i~v~D~a~ai~~~~~~~~--~~~~~ni~ 251 (668)
+-. ...+..+++|+|++++.+++.+. ....+.++
T Consensus 226 ~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~g 266 (324)
T 3u9l_A 226 EIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVD 266 (324)
T ss_dssp HHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeC
Confidence 000 00012578999999999998763 33456665
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=178.96 Aligned_cols=216 Identities=15% Similarity=0.085 Sum_probs=149.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|.... +..+.. .....++.++.+|++|.+++.++++.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPA--LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6889999886421 111111 11234789999999999998887743
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.|+.++++++.. .+...++|++||...+.+..
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 176 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA-------- 176 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT--------
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--------
Confidence 379999999997643 223345567899999999999988643 23246999999987764332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHH-----HHcCCCceeecCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILL-----AMRGLPLPIHGDGS 220 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 220 (668)
+...|+.+|.+.+.+.+.++.+. |+++.+++||.|..+.. ...... .....+....+...
T Consensus 177 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (301)
T 3tjr_A 177 ------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV------SNSERIRGADYGMSATPEGAFGPLP 244 (301)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH------HHHHHHC------------------
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc------cccccccchhhccccChhhhccccc
Confidence 24579999999999998887654 89999999999987632 111100 00011111112223
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
....+++++|+|++++.+++.+.
T Consensus 245 ~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 245 TQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred cccCCCCHHHHHHHHHHHHhcCC
Confidence 34568999999999999998764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.1e-19 Score=175.59 Aligned_cols=228 Identities=12% Similarity=0.067 Sum_probs=164.5
Q ss_pred CCCCCeEEEEcCCCh--hHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 3 TYTPKNILITGAAGF--IASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~--iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
.+++|+||||||+|+ ||++++++|+++ +++|++++|..... ....+.......++.++.+|++|.+.+.++++.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 456789999999998 999999999999 68899888863211 111111122223789999999999998887743
Q ss_pred ----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+.+..
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 156 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP----- 156 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-----
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC-----
Confidence 379999999997641 12333456788999999999999887642 135999999987654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|.+.+.+.+.++.+. ++++.+++||.|..+...................+.
T Consensus 157 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--------- 218 (266)
T 3oig_A 157 ---------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL--------- 218 (266)
T ss_dssp ---------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------
T ss_pred ---------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------
Confidence 24579999999999999887653 799999999999987543322223333333322211
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+.+.+|+|++++.++... ..|+.+++.+|..
T Consensus 219 ~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 219 RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 13568999999999988753 3578999988764
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=177.23 Aligned_cols=221 Identities=18% Similarity=0.127 Sum_probs=160.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++.++.... ....+.. .....++.++.+|++|.+.+.++++.
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAG-AADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 6888888774321 1111110 11234688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 173 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNP-------- 173 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC--------
Confidence 2799999999976432 2334566789999999999998763 233 57999999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++... ... ........+ ...+
T Consensus 174 ------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~--~~~~~~~~p---------~~r~ 233 (269)
T 4dmm_A 174 ------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS---ELA--AEKLLEVIP---------LGRY 233 (269)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC---HHH--HHHHGGGCT---------TSSC
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc---ccc--HHHHHhcCC---------CCCC
Confidence 2457999999999999888765 4899999999999988652 111 122222211 1246
Q ss_pred eeHHHHHHHHHHHHhcC----CCCceEEEcCCCcc
Q 005949 226 LYCEDVAEAFECILHKG----EVGHVYNVGTKKER 256 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~~~ 256 (668)
.+.+|+|++++.++..+ ..|+.+++.+|..+
T Consensus 234 ~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 234 GEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp BCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred CCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence 78999999999998763 24889999988654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-20 Score=183.51 Aligned_cols=238 Identities=14% Similarity=0.089 Sum_probs=165.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCC---CeEEEEccCCCHHHHHHHhc
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASS---NFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~---~~~~~~~Dl~d~~~~~~~~~ 77 (668)
.+++|+||||||+|+||+++++.|+++ +++|++++|.... +...... .... ++.++.+|++|.+.+.+++.
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 98 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDR--LEETKQQILKAGVPAEKINAVVADVTEASGQDDIIN 98 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHH
Confidence 355789999999999999999999999 6889999886421 1111100 0112 68899999999999888774
Q ss_pred c-----CCCCEEEEcCccCCcc------cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~ 143 (668)
. .++|+|||+||..... ...+++...+++|+.++.++++++... .. .++|++||...+....
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~--- 174 (297)
T 1xhl_A 99 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH--- 174 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC---
T ss_pred HHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC---
Confidence 2 3799999999975422 223345678999999999999887643 22 6999999987764330
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--Ch-----HHHHHHHHHcCCCc
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KL-----IPKFILLAMRGLPL 213 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~-----~~~~~~~~~~~~~~ 213 (668)
.+...|+.+|...+.+.+.++.+ .++++++++||.|.++..... .. ...+...... ..
T Consensus 175 ----------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 242 (297)
T 1xhl_A 175 ----------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE--CI 242 (297)
T ss_dssp ----------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT--TC
T ss_pred ----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHh--cC
Confidence 12456999999999999988754 589999999999998742110 00 0011111111 11
Q ss_pred eeecCCCceEeceeHHHHHHHHHHHHhcC----CCCceEEEcCCCcccHHHHHHHHHH
Q 005949 214 PIHGDGSNVRSYLYCEDVAEAFECILHKG----EVGHVYNVGTKKERRVIDVAKDICK 267 (668)
Q Consensus 214 ~~~~~~~~~~~~i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~~~s~~el~~~i~~ 267 (668)
....+...+|+|++++.++... ..|+.+++.+|......+.+..+.+
T Consensus 243 -------p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 243 -------PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp -------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred -------CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence 1124789999999999888643 3578999998876665554444443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-20 Score=190.67 Aligned_cols=201 Identities=17% Similarity=0.263 Sum_probs=150.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCccc---------------------------ccccccCChhHHHHHhhhcCCCE
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------------YGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------------~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
+||+|+|||||||||+++++.|+++|++|. ++.+|++|++++.++++++ |+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~--d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQV--DI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCC--CE
Confidence 467999999999999999999999998653 2346888899999999976 99
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC-C
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT-G 512 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~-~ 512 (668)
|||+|+.. . +.++.+++++|++.+ ++.++. | +|+.. .+++.+..| .
T Consensus 81 vi~~a~~~---~---------------~~~~~~l~~aa~~~g~v~~~v~-S--~~g~~-----------~~~~~~~~p~~ 128 (321)
T 3c1o_A 81 VISALPFP---M---------------ISSQIHIINAIKAAGNIKRFLP-S--DFGCE-----------EDRIKPLPPFE 128 (321)
T ss_dssp EEECCCGG---G---------------SGGGHHHHHHHHHHCCCCEEEC-S--CCSSC-----------GGGCCCCHHHH
T ss_pred EEECCCcc---c---------------hhhHHHHHHHHHHhCCccEEec-c--ccccC-----------ccccccCCCcc
Confidence 99999844 1 677899999999998 876653 3 35321 112222223 4
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhh-------cccceeec-----CCCcccHhhHHHHHHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKIS-------RYNKVVNI-----PNSMTVLDELLPISIE 580 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~-------~~~~~~~~-----~~~~~~v~D~a~~~~~ 580 (668)
+.| .+|..+|++++. .+++++++|++.++++ ++..+. ..+..... ..++++++|+|+++..
T Consensus 129 ~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 201 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIEA----AALPYTYVSANCFGAY--FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK 201 (321)
T ss_dssp HHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHH--HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHH----cCCCeEEEEeceeccc--cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence 579 999999999975 4688899998766554 222222 22222222 2278999999999999
Q ss_pred HHhcc--CCceeeecC-CCccCHHHHHHHHHhhcCCCCCCCCCCHH
Q 005949 581 MAKRN--LRGIWNFTN-PGVVSHNEILEMYKKYINPEFKWVNFTLE 623 (668)
Q Consensus 581 ~~~~~--~~g~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 623 (668)
++.++ .+++|++++ ++.+|+.|+++.+.+.+|.+..+..++..
T Consensus 202 ~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 247 (321)
T 3c1o_A 202 VACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDE 247 (321)
T ss_dssp HHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHH
T ss_pred HHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHH
Confidence 99865 356788876 48999999999999999998877766644
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-20 Score=182.23 Aligned_cols=179 Identities=15% Similarity=0.068 Sum_probs=136.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--ccc------------------ccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--PFE------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--~v~------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
|+|+||||+|+||+++++.|+++|+ +|. ++.+|++|++++.+++++ +|+|||+||..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vi~~ag~~- 95 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQG--HDVGFCCLGTT- 95 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSS--CSEEEECCCCC-
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcC--CCEEEECCCcc-
Confidence 6899999999999999999999998 652 345788898888888875 49999999965
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
.. ..++...+++|+.++.+++++|++.++ ++|++||..+|+. +.+.|+.+|..+
T Consensus 96 --~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~--------------------~~~~Y~~sK~~~ 150 (242)
T 2bka_A 96 --RG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------------------SNFLYLQVKGEV 150 (242)
T ss_dssp --HH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------------------CSSHHHHHHHHH
T ss_pred --cc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC--------------------CcchHHHHHHHH
Confidence 11 223567788999999999999999887 7888888877621 226899999999
Q ss_pred HHHHHhccCeeEe-EEeeeecCCCCChhh---HHHH----hhcccceeecCCCcccHhhHHHHHHHHHhcc-CCceeeec
Q 005949 523 EELLKEYDNVCTL-RVRMPISSDLNNPRN---FITK----ISRYNKVVNIPNSMTVLDELLPISIEMAKRN-LRGIWNFT 593 (668)
Q Consensus 523 E~~~~~~~~~~~l-~~~~~r~~~~~g~~~---~~~~----~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~ 593 (668)
|++++.+ ++ +++++||+.++||.. +... +....+.......+++++|+|++++.++.++ ..|.|++.
T Consensus 151 e~~~~~~----~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~ 226 (242)
T 2bka_A 151 EAKVEEL----KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLE 226 (242)
T ss_dssp HHHHHTT----CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEE
T ss_pred HHHHHhc----CCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccccCeeEee
Confidence 9999875 45 799999999999852 2221 1111111111236899999999999999876 44677665
Q ss_pred C
Q 005949 594 N 594 (668)
Q Consensus 594 ~ 594 (668)
+
T Consensus 227 ~ 227 (242)
T 2bka_A 227 N 227 (242)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=175.79 Aligned_cols=228 Identities=12% Similarity=0.099 Sum_probs=155.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++|++|||||+|+||++++++|+++ +++|++.++..... ...... .....++.++.+|++|.+++.++++.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEG-AATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHH-HHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999 68888874432211 111000 11234688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCcccc-CCCCCCcCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVY-GETDEDAVVGNH 148 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vy-g~~~~~~~~~~~ 148 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+ ....
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------- 153 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP-------- 153 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST--------
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC--------
Confidence 379999999996522 12233456789999999999999987642 12489999998776 3221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChH-HHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLI-PKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|.+.+.+.+.++.++ ++++..+.||.|..+.... .. +..... .........+
T Consensus 154 ------~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~--~~~~~~~~~---------~~~~~p~~r~ 216 (259)
T 3edm_A 154 ------GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDT--FTKPEVRER---------VAGATSLKRE 216 (259)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------CC
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccc--ccChHHHHH---------HHhcCCCCCC
Confidence 24579999999999999988765 3899999999998875421 11 111111 1111223456
Q ss_pred eeHHHHHHHHHHHHhcCC---CCceEEEcCCCcccH
Q 005949 226 LYCEDVAEAFECILHKGE---VGHVYNVGTKKERRV 258 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s~ 258 (668)
.+++|+|++++.++.... .|+.|++.+|...+.
T Consensus 217 ~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 217 GSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred cCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence 789999999999886542 588999998765443
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=174.96 Aligned_cols=224 Identities=15% Similarity=0.114 Sum_probs=153.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.+++|+||||||+|+||+++++.|+++ +++|++++|.........+ .....++.++.+|++|.+.+.++++.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAI--RNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHH--HHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHH--HhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999 6889998886411100011 11134688999999999998877642
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.++.++.++ +++.+ .+++|++||...+.+..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 149 (249)
T 2ew8_A 80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE--------- 149 (249)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC---------
Confidence 4799999999975422 23344567899999998888877 44444 68999999988765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++.... ...... ..... .+. .....+.
T Consensus 150 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~-~~~~~--~~~-----~~~~~~~ 215 (249)
T 2ew8_A 150 -----AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA-SALSAM-FDVLP--NML-----QAIPRLQ 215 (249)
T ss_dssp -----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT-----SSSCSCC
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh-ccccch-hhHHH--Hhh-----CccCCCC
Confidence 2457999999999999998765 38999999999999875420 000000 00000 010 1122478
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+.+|+|++++.++... ..|+.+++.+|.
T Consensus 216 ~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 216 VPLDLTGAAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred CHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence 9999999999988643 357889988764
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-20 Score=181.53 Aligned_cols=226 Identities=16% Similarity=0.091 Sum_probs=160.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++.+|.... +...... ....++.++.+|++|.+.+.++++.
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSE--LDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999 6889999885321 1111110 0235789999999999988877642
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...++|++||...+....
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 166 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP------- 166 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC-------
Confidence 3799999999976532 223345678899999999999877542 2236999999987764432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.+ .++++..++||.|.++...................+ ...
T Consensus 167 -------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r 230 (266)
T 4egf_A 167 -------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP---------LGR 230 (266)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT---------TSS
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC---------CCC
Confidence 2457999999999999988766 389999999999988642100000111222222221 124
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
+...+|+|++++.++... ..|+.+++.+|...
T Consensus 231 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 231 FAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 678999999999988653 35789999987643
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-20 Score=184.35 Aligned_cols=225 Identities=12% Similarity=0.125 Sum_probs=161.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.+|.... ...... .....++.++.+|++|.+.+.++++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSR--VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHH--HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 6889998885421 111111 11234688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+++... ....++|++||...+....
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~--------- 170 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA--------- 170 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT---------
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC---------
Confidence 2799999999975432 234456678999999999998766542 1247999999976643321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCCceeecCCCceEe
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI--PKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|.+.+.+.+.++.+ +++++..++||.|.++... ... +.+........+ ...
T Consensus 171 -----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p---------~~r 234 (271)
T 4ibo_A 171 -----TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ--ALIDNPEFDAWVKARTP---------AKR 234 (271)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH--HHHHCHHHHHHHHHHST---------TCS
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh--hcccCHHHHHHHHhcCC---------CCC
Confidence 2457999999999999998765 4899999999999987531 110 112222222221 123
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
+..++|+|++++.++... ..|+.+++.+|...+
T Consensus 235 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 235 WGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 567899999999888643 357899999886543
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-20 Score=181.19 Aligned_cols=229 Identities=13% Similarity=0.100 Sum_probs=160.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCC---CeEEEEccCCCHHHHHHH
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASS---NFKFVKGDIASADLVNFL 75 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~---~~~~~~~Dl~d~~~~~~~ 75 (668)
|..+++|++|||||+|+||+++++.|+++ +++|++++|.... +...... .... ++.++.+|++|.+.+.++
T Consensus 1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 76 (280)
T 1xkq_A 1 MPRFSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSER--LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76 (280)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHH
Confidence 66678899999999999999999999999 6889999886421 1111100 0112 688999999999998877
Q ss_pred hcc-----CCCCEEEEcCccCCcc--------cccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCC
Q 005949 76 LIT-----ESIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 76 ~~~-----~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~ 140 (668)
++. .++|+|||+||..... ...+++...+++|+.++.++++++...- .-+++|++||...+....
T Consensus 77 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 156 (280)
T 1xkq_A 77 INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ 156 (280)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC
Confidence 742 3799999999975421 1233456788999999999998876421 017999999987764431
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--Ch-----HHHHHHHHHcC
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--KL-----IPKFILLAMRG 210 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~~-----~~~~~~~~~~~ 210 (668)
.+...|+.+|...+.+.+.++.+ +++++.+++||.|.++..... .. ...+.......
T Consensus 157 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (280)
T 1xkq_A 157 -------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC 223 (280)
T ss_dssp -------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred -------------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC
Confidence 12457999999999999988754 489999999999998743110 00 00111111111
Q ss_pred CCceeecCCCceEeceeHHHHHHHHHHHHhcC----CCCceEEEcCCCc
Q 005949 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHKG----EVGHVYNVGTKKE 255 (668)
Q Consensus 211 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~~ 255 (668)
. ....+.+.+|+|++++.++..+ ..|+.+++.+|..
T Consensus 224 --~-------p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 224 --I-------PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263 (280)
T ss_dssp --C-------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred --C-------CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence 1 1124789999999999888543 3578999988754
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=171.31 Aligned_cols=211 Identities=14% Similarity=0.024 Sum_probs=156.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-C
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-E 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~ 79 (668)
|..+++|++|||||+|+||++++++|+++ +++|++.+|... +|++|.+++.++++. .
T Consensus 1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~g 58 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG--------------------LDISDEKSVYHYFETIG 58 (223)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT--------------------CCTTCHHHHHHHHHHHC
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc--------------------cCCCCHHHHHHHHHHhC
Confidence 55567789999999999999999999998 789999888421 899999999988854 3
Q ss_pred CCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++|+|||+||.... +...+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------- 125 (223)
T 3uce_A 59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------------- 125 (223)
T ss_dssp SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT-------------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC-------------
Confidence 79999999997521 22334456789999999999999887642 124899999987765432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcC-CCEEEEeeCceeCCCCCCCC--hHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSYG-LPVITTRGNNVYGPNQFPEK--LIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
+...|+.+|...+.+.+.++.+++ +++..++||.+.++...... ....+........+ ...+.+++|
T Consensus 126 -~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d 195 (223)
T 3uce_A 126 -NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP---------VGKVGEASD 195 (223)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST---------TCSCBCHHH
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC---------CCCccCHHH
Confidence 245799999999999999988764 99999999999988542211 11122222222221 124678999
Q ss_pred HHHHHHHHHhcCC-CCceEEEcCCCcc
Q 005949 231 VAEAFECILHKGE-VGHVYNVGTKKER 256 (668)
Q Consensus 231 ~a~ai~~~~~~~~-~~~~~ni~~~~~~ 256 (668)
+|++++.+++... .|+.+++.+|..+
T Consensus 196 vA~~~~~l~~~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 196 IAMAYLFAIQNSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHccCCCCCCcEEEecCCeec
Confidence 9999999888543 5789999988654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=177.46 Aligned_cols=224 Identities=15% Similarity=0.101 Sum_probs=161.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++.+|... .++.+... ....++.++.+|++|.+++.++++.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSD--ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGG--GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 688999988542 22211111 1234688999999999998888743
Q ss_pred --CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++... +.-.++|++||...+....
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~-------- 177 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI-------- 177 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC--------
Confidence 27999999999865322 23345567889999999999877542 2236899999977654321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
..+...|+.+|...+.+.+.++.+ .++++.+++||.|..+.... ............+ ...+
T Consensus 178 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~---~~~~~~~~~~~~p---------~~r~ 241 (276)
T 3r1i_A 178 ----PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP---LADYHALWEPKIP---------LGRM 241 (276)
T ss_dssp ----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG---GGGGHHHHGGGST---------TSSC
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---chHHHHHHHhcCC---------CCCC
Confidence 112457999999999999998876 48999999999999886521 1112222222211 1236
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
...+|+|++++.++... ..|+.+++.+|..
T Consensus 242 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 242 GRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp BCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred cCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence 68899999999988643 2578999987753
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=177.86 Aligned_cols=228 Identities=14% Similarity=0.063 Sum_probs=159.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|... ........ ...++.++.+|++|.+.+.++++.
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGD--AADAAATK-IGCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHH-HCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-cCCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 688999988642 11111111 134688999999999998877743
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||.... +.+.+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------- 170 (277)
T 3gvc_A 102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG----------- 170 (277)
T ss_dssp SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-----------
Confidence 379999999997643 2234456678999999999999877531 2257899999977654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHH---HHcCCCceeecCCCceEec
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILL---AMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|.+|... ..... ......... ........+
T Consensus 171 ---~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~r~ 240 (277)
T 3gvc_A 171 ---GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ------TAMAMFDGALGAGGARS-MIARLQGRM 240 (277)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------HHHTCC------CCHHH-HHHHHHSSC
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHH------HhhhcchhhHHHHhhhh-hhhccccCC
Confidence 2457999999999999987765 4899999999999987320 00000 000000000 000011246
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
.+.+|+|++++.++... ..|+.+++.+|...+
T Consensus 241 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 241 AAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred CCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 78999999999988653 357899999886543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.7e-19 Score=172.00 Aligned_cols=216 Identities=17% Similarity=0.140 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|+||||||+|+||++++++|+++ +++|++++|..... ...+..+.+|++|.+.+.++++.
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 78899988854211 12567889999999998887743
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++.. .+ ..++|++||...|....
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 148 (269)
T 3vtz_A 80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATK---------- 148 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence 37999999999755322 2234456788999999999887653 23 57999999988875432
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHcCCCceeecCC
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++... ................
T Consensus 149 ----~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 216 (269)
T 3vtz_A 149 ----NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH-------- 216 (269)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS--------
T ss_pred ----CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC--------
Confidence 24579999999999999988776 799999999999986320 0011112222211111
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
....+.+++|+|++++.++... ..|+.+++.+|..
T Consensus 217 -p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 217 -PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp -TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence 2234678999999999888653 3578999998754
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=178.56 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=158.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPA--DEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCC--HHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 6889998886421 1111100 0134688999999999998887743
Q ss_pred --CCCCEEEEcCccCCc------ccccCChHHHHHHHHHH----HHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 --ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYG----THVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... ....+++...+++|+.+ ++++++.+++.+ .++||++||...+...
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------- 179 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN------- 179 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC--------
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC-------
Confidence 369999999997643 22233456788999999 567777777655 6899999998765331
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
...+...|+.+|...|.+++.++.++ + ++.+++||.+.++...... ...........+ ..
T Consensus 180 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p---------~~ 242 (279)
T 3ctm_A 180 -----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS--KDMKAKWWQLTP---------LG 242 (279)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC--HHHHHHHHHHST---------TC
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC--hHHHHHHHHhCC---------cc
Confidence 01234579999999999999988764 6 8999999999988542111 122222111111 12
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+++++|+|++++.++... ..|+.+++.+|..
T Consensus 243 ~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 243 REGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp SCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence 3678999999999988753 3578999987753
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-19 Score=179.13 Aligned_cols=235 Identities=17% Similarity=0.139 Sum_probs=161.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccc-------c---CC--CcCCCCeEEEEccCCC
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKN-------L---IP--SKASSNFKFVKGDIAS 68 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~-------~---~~--~~~~~~~~~~~~Dl~d 68 (668)
|..+++|+||||||+|+||+++++.|+++ +++|+++++......... + .. .....++.++.+|++|
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 118 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD 118 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 44566789999999999999999999999 788888877532111110 0 00 1123468899999999
Q ss_pred HHHHHHHhcc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccc
Q 005949 69 ADLVNFLLIT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEV 135 (668)
Q Consensus 69 ~~~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~v 135 (668)
.+.+.++++. .++|+|||+||..... ...+++...+++|+.++.++++++.. .+.-.++|++||...
T Consensus 119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~ 198 (317)
T 3oec_A 119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG 198 (317)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh
Confidence 9998887743 3799999999976532 23345667889999999999987743 222468999999877
Q ss_pred cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcC--
Q 005949 136 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRG-- 210 (668)
Q Consensus 136 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-- 210 (668)
+.... +...|+.+|...+.+.+.++.++ |+++.+++||.|.++...... +.......
T Consensus 199 ~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~ 260 (317)
T 3oec_A 199 LRGAP--------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEK----LLKMFLPHLE 260 (317)
T ss_dssp SSCCT--------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHH----HHHHHCTTCS
T ss_pred cCCCC--------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchh----hhhhhhhhcc
Confidence 64432 23569999999999999988764 899999999999987431100 00111000
Q ss_pred -CC----ceee-cCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 211 -LP----LPIH-GDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 211 -~~----~~~~-~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.. .... ........|++++|+|++++.++... ..|+++++.+|..
T Consensus 261 ~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 261 NPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp SCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred ccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 00 0000 00011146789999999999888643 2578999998764
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=174.99 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=159.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++|++|||||+|+||++++++|+++ +++|++.+|.... .+.+... ...+...+.+|++|.+++.++++. .
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~--~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESG--AQAISDY-LGDNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHH-hcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 7889998886421 1111111 122467899999999998887743 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||..... .+.+++...+++|+.++.++++++.. .+ ..++|++||...+.+..
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----------- 150 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNA----------- 150 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC-----------
Confidence 799999999976432 23445667899999999999988743 33 57999999976653321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|..+.... ............. ....+.++
T Consensus 151 ---~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~---------p~~r~~~p 216 (248)
T 3op4_A 151 ---GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA--LNDEQRTATLAQV---------PAGRLGDP 216 (248)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT--SCHHHHHHHHHTC---------TTCSCBCH
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh--cCHHHHHHHHhcC---------CCCCCcCH
Confidence 2457999999999999988765 38999999999999886532 1122222222221 12246789
Q ss_pred HHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 229 EDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+|+|++++.++.... .|+.+++.+|.
T Consensus 217 ~dva~~v~~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 217 REIASAVAFLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence 999999998886532 47899998775
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-20 Score=185.33 Aligned_cols=225 Identities=11% Similarity=0.051 Sum_probs=143.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++++||||||+|+||+++++.|+++ +++|++.+|...... ...+.......++.++.+|++|.+++.+++..
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999 688999988642110 01111111122688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC---------CCcEEEEEcCccccCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG---------QIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~v~~SS~~vyg~~~~~ 142 (668)
.++|+|||+||..... ...+++...+++|+.|+.++++++.... ...++|++||...+.+..
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~-- 160 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG-- 160 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC--
Confidence 3789999999975432 2334456789999999999998776431 135799999987765432
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
....|+.+|.+.+.+.+.++.+ .++++++++||.|.++........+..................
T Consensus 161 ------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (319)
T 3ioy_A 161 ------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL 228 (319)
T ss_dssp ------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred ------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHH
Confidence 1346999999777666665433 3899999999999987543222111111110000000000000
Q ss_pred -CceEeceeHHHHHHHHHHHHhcCC
Q 005949 220 -SNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 220 -~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
......++++|+|++++.+++.+.
T Consensus 229 ~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 229 AGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 011122799999999999998763
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=183.15 Aligned_cols=228 Identities=13% Similarity=0.117 Sum_probs=158.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIP---SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|...... ...+.. .....++.++.+|++|.+.+.+++..
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 45689999999999999999999999 688999888632110 000000 01234789999999999998887743
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ...+++|++||...++..
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 166 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP------- 166 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT-------
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCC-------
Confidence 3699999999964321 223345678899999999999987542 114789999997732211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCC--CCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...+.+.+.++.+. +++++++|||.|+|+.. ........+....... ..
T Consensus 167 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~p 229 (303)
T 1yxm_A 167 --------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---------IP 229 (303)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---------ST
T ss_pred --------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---------Cc
Confidence 23469999999999999887764 89999999999999842 1111001111111110 01
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
...+++++|+|++++.++... ..|+.+++.+|...+
T Consensus 230 ~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 230 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 124788999999999988653 357899999886543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-20 Score=174.91 Aligned_cols=184 Identities=13% Similarity=0.077 Sum_probs=139.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccc-------cccccCChhHHHHHhhhc-CCCEEEEcccccCCCC-ccccccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------GKGRLEDCSSLIADVQSV-KPTHVFNAAGVTGRPN-VDWCESH 453 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~~~~-~~~~~~~ 453 (668)
+|||+||||+|+||+++++.|+ +|++|.. +.+|++|+++++++++.. ++|+|||+||...... .....++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~ 81 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEK 81 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHH
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 4799999999999999999999 9998753 468999999999998875 5799999999662111 1112234
Q ss_pred cccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc
Q 005949 454 KTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD 530 (668)
Q Consensus 454 ~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~ 530 (668)
....+++|+.++.++++++... +.+++++||...+. +.++.+.|+.+|...|.+++.+.
T Consensus 82 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~~~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 82 NAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED------------------PIVQGASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp HHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS------------------CCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC------------------CCCccHHHHHHHHHHHHHHHHHH
Confidence 4567789999999999999876 55777888765431 12334689999999999999876
Q ss_pred Ce--eEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-CCceeee
Q 005949 531 NV--CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN-LRGIWNF 592 (668)
Q Consensus 531 ~~--~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni 592 (668)
.. .++++.++||+.++++..-. ... .....+++++|+|++++.++.+. .+++||+
T Consensus 144 ~e~~~gi~v~~v~pg~v~~~~~~~---~~~----~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 144 IEMPRGIRINTVSPNVLEESWDKL---EPF----FEGFLPVPAAKVARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp TSCSTTCEEEEEEECCBGGGHHHH---GGG----STTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHccCCeEEEEEecCccCCchhhh---hhh----ccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence 43 48999999999999885321 111 11346889999999999888655 4458886
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.8e-19 Score=175.33 Aligned_cols=224 Identities=11% Similarity=0.088 Sum_probs=157.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... +....... ...++.++.+|++|.+.+.++++.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEA--CADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHH--HHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 34689999999999999999999999 6889999886421 11111100 112688899999999998877742
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCC---CcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQ---IRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~---~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+. .+++|++||...+....
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~------ 176 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG------ 176 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC------
Confidence 3799999999975431 2334556789999999988887664 3331 27999999988765432
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 147 NHEASQLLPTN-PYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 147 ~~e~~~~~p~~-~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
... .|+.+|...+.+.+.++.+ .++++.+++||.+.++... ................+ .
T Consensus 177 --------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p-------~ 239 (276)
T 2b4q_A 177 --------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR--HIANDPQALEADSASIP-------M 239 (276)
T ss_dssp --------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH--HHHHCHHHHHHHHHTST-------T
T ss_pred --------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh--hcchhHHHHHHhhcCCC-------C
Confidence 123 6999999999999988765 3899999999999987531 11111111111100011 1
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+.+.+|+|++++.++..+ ..|+.+++.+|.
T Consensus 240 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 240 GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 24679999999999988653 357889988764
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-19 Score=175.95 Aligned_cols=225 Identities=15% Similarity=0.133 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... ...... .....++.++.+|++|.+.+.+++..
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEG--LEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 45789999999999999999999999 6889998886421 111110 00134688999999999998887743
Q ss_pred ----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.++.++.+++ ++.+ .+++|++||...+....
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----- 160 (267)
T 1iy8_A 87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIG----- 160 (267)
T ss_dssp HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCS-----
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCC-----
Confidence 279999999997543 1223445678899999888766544 4444 58999999987654321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC------CCChHHHHHHHHHcCCCceee
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF------PEKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~ 216 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|.++... ................
T Consensus 161 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----- 226 (267)
T 1iy8_A 161 ---------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN----- 226 (267)
T ss_dssp ---------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC-----
T ss_pred ---------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC-----
Confidence 2457999999999999987765 4899999999999986321 0011111111111111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
....+.+.+|+|++++.++..+ ..|+.+++.+|...
T Consensus 227 ----p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 265 (267)
T 1iy8_A 227 ----PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA 265 (267)
T ss_dssp ----TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred ----CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 1124779999999999988653 35788999887644
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=179.43 Aligned_cols=222 Identities=15% Similarity=0.107 Sum_probs=158.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++|++|||||+|+||++++++|+++ +++|++++|.... +..... .....++.++.+|++|.+.+.++++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKN--VSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999 6889999886421 111111 11235689999999999998877743
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH------cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV------TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+....
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~------- 170 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVM------- 170 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCC-------
Confidence 3799999999976432 22334557888999999999987754 23 57999999987754332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC---------CChHHHHHHHHHcCCCcee
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---------EKLIPKFILLAMRGLPLPI 215 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~ 215 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++.... ...............
T Consensus 171 -------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (279)
T 3sju_A 171 -------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---- 239 (279)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC----
T ss_pred -------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC----
Confidence 2457999999999999998876 48999999999998763200 001112222222221
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
....+.+++|+|++++.++... ..|+.+++.+|.
T Consensus 240 -----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 240 -----PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp -----TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred -----CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 2234678999999999888653 358899998775
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=177.64 Aligned_cols=231 Identities=13% Similarity=0.074 Sum_probs=156.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc---CCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK---ASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... .+..+.... ...++.++.+|++|.+.+.+++..
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 78 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAA-EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHH-HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcch-HHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999 6889998886421 011111100 024688899999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ .+++|++||...+....
T Consensus 79 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 150 (260)
T 1x1t_A 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA------- 150 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCC-------
Confidence 3799999999975422 23344567899999999999887743 33 57999999987764322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHH-Hc-CCCceee-cCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLA-MR-GLPLPIH-GDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~ 221 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++.... ......... .. ....... .....
T Consensus 151 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p 221 (260)
T 1x1t_A 151 -------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK--QISALAEKNGVDQETAARELLSEKQP 221 (260)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCT
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH--hhhhhccccCCchHHHHHHHhhccCC
Confidence 24579999999999999887654 8999999999999885421 111000000 00 0000000 00011
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 222 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 235789999999999888653 357889998774
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=176.29 Aligned_cols=222 Identities=17% Similarity=0.108 Sum_probs=158.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+.+++++||||||+|+||++++++|+++ +++|++..+.... ....... .....++.++.+|++|.+.+.+++..
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAA-GAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE 98 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchH-HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999 6788665443211 1111100 11235789999999999998887743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH-----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK-----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +. ...++|++||...+.+..
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----- 172 (267)
T 4iiu_A 99 IAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGAR-QGGRIITLSSVSGVMGNR----- 172 (267)
T ss_dssp HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SCEEEEEECCHHHHHCCT-----
T ss_pred HHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHhccCCC-----
Confidence 3799999999976532 2334566789999999999998763 22 357999999976653322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++..... ...........+.
T Consensus 173 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~--------- 231 (267)
T 4iiu_A 173 ---------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPM--------- 231 (267)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTT---------
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCC---------
Confidence 24579999999999888877654 89999999999999865322 2333333332221
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
..+.+++|+|++++.++... ..|+.+++.+|
T Consensus 232 ~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 232 KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 23678999999999888653 35788999876
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.82 E-value=7e-20 Score=179.83 Aligned_cols=223 Identities=14% Similarity=0.062 Sum_probs=160.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... .+.+.. .....++..+.+|++|.+.+.++++.
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAG--AEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 6789999885421 111111 01134678899999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+....
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 172 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNP-------- 172 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC--------
Confidence 3799999999975432 23345667899999999999987752 23 46899999977654322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++.... ............. ....+
T Consensus 173 ------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~---------p~~r~ 235 (270)
T 3ftp_A 173 ------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG--LPQEQQTALKTQI---------PLGRL 235 (270)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH--SCHHHHHHHHTTC---------TTCSC
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh--cCHHHHHHHHhcC---------CCCCC
Confidence 2356999999999999988765 48999999999998763210 1111222222221 22346
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+.+|+|++++.++... ..|+.+++.+|..+
T Consensus 236 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 236 GSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred CCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence 78999999999888543 25789999988654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-19 Score=177.42 Aligned_cols=234 Identities=15% Similarity=0.055 Sum_probs=161.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-----------CCccccCC--CcCCCCeEEEEccCCCH
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----------SNLKNLIP--SKASSNFKFVKGDIASA 69 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-----------~~~~~~~~--~~~~~~~~~~~~Dl~d~ 69 (668)
.+++|++|||||+|+||+++++.|+++ +++|++++|.... ..+..... .....++..+.+|++|.
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 355789999999999999999999999 6889998874211 00110000 11235688999999999
Q ss_pred HHHHHHhcc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCcccc
Q 005949 70 DLVNFLLIT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVY 136 (668)
Q Consensus 70 ~~~~~~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vy 136 (668)
+.+.+++.. .++|+|||+||..... .+.+++...+++|+.++.++++++.. .+.-.++|++||...+
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence 998887753 4799999999976532 23445667899999999999887543 2223699999998776
Q ss_pred CCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCc
Q 005949 137 GETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPL 213 (668)
Q Consensus 137 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~ 213 (668)
.... ....|+.+|.+.+.+.+.++.++ ++++..++||.|.++.... ................
T Consensus 166 ~~~~--------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~ 230 (277)
T 3tsc_A 166 KMQP--------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG-DMVTAVGQAMETNPQL 230 (277)
T ss_dssp SCCS--------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH-HHHHHHHHHHHTCGGG
T ss_pred CCCC--------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc-hhhhhhhhcccccHHH
Confidence 4432 23569999999999999987664 8999999999999875421 1111111111111110
Q ss_pred -eeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 214 -PIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 214 -~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
......... .+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 231 ~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 231 SHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp TTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 001111112 3789999999999988653 357899998775
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=177.52 Aligned_cols=229 Identities=16% Similarity=0.064 Sum_probs=153.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++++||||||+|+||++++++|+++ +++|++++|... .++.+.. ....++.++.+|++|.+.+.++++.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKA--GAERVAG-EIGDAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-HHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHH--HHHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999 688999998642 1111111 1134689999999999998887743
Q ss_pred CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHcC-------CCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVTG-------QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-------~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------ 155 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP------ 155 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC------
Confidence 2799999999975421 1234456788999999999888765321 134799999977654322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|.+.+.+.+.++.+ .++++.+++||.+.++.... +...... .............
T Consensus 156 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~-----~~~~~~~~~~~~~ 220 (261)
T 3n74_A 156 --------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT--FMGEDSE-----EIRKKFRDSIPMG 220 (261)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CTTS
T ss_pred --------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhh--hcccCcH-----HHHHHHhhcCCcC
Confidence 2446999999999999998766 48999999999999875421 1100000 0000111122233
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccH
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRV 258 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~ 258 (668)
.+++++|+|++++.++... ..|+.+++.+|..++.
T Consensus 221 ~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 221 RLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred CCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 5789999999999888643 3588999998876654
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=174.84 Aligned_cols=222 Identities=16% Similarity=0.161 Sum_probs=156.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.+++|+||||||+|+||++++++|+++ +++|++++|... ....+.... ..++.++.+|++|.+.+.++++.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEA--AGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 466789999999999999999999999 688999988632 111111111 34688999999999998877643
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ +++|++||...+.+..
T Consensus 78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~--------- 146 (253)
T 1hxh_A 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIE--------- 146 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCT---------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCC---------
Confidence 3689999999975432 223445678899998887776644 3333 7999999988765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---c--CCCEEEEeeCceeCCCCC---CCChHHHHHHHHHcCCCceeecCCCc
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---Y--GLPVITTRGNNVYGPNQF---PEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...|.+.+.++.+ . +++++++|||.|++|... +...... ....... ...
T Consensus 147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~------~~p 212 (253)
T 1hxh_A 147 -----QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE---MVLHDPK------LNR 212 (253)
T ss_dssp -----TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH---HHBCBTT------TBT
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHH---HHhhhhc------cCc
Confidence 2347999999999999988765 3 899999999999987421 0000000 0101000 011
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+.+.+|+|++++.++..+ ..|+.+++.+|.
T Consensus 213 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 124789999999999988754 357889988774
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.2e-20 Score=185.00 Aligned_cols=203 Identities=18% Similarity=0.239 Sum_probs=150.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc----------------------------ccccccCChhHHHHHhhhcCCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------------------YGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------------------~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
||+|+|||||||||+++++.|+++|++|. ++.+|++|++++.++++++ |+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQV--DI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCC--CE
Confidence 57899999999999999999999998652 2446888989999999876 99
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC-C
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT-G 512 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~-~ 512 (668)
|||+|+.. . +.++.+++++|++.+ ++.++. | +|+... ++..+..| .
T Consensus 80 vi~~a~~~---~---------------~~~~~~l~~aa~~~g~v~~~v~-S--~~g~~~-----------~~~~~~~p~~ 127 (307)
T 2gas_A 80 VICAAGRL---L---------------IEDQVKIIKAIKEAGNVKKFFP-S--EFGLDV-----------DRHDAVEPVR 127 (307)
T ss_dssp EEECSSSS---C---------------GGGHHHHHHHHHHHCCCSEEEC-S--CCSSCT-----------TSCCCCTTHH
T ss_pred EEECCccc---c---------------cccHHHHHHHHHhcCCceEEee-c--ccccCc-----------ccccCCCcch
Confidence 99999854 1 567899999999998 876654 3 354221 11222233 3
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--hHHHH---hhcccceeec-----CCCcccHhhHHHHHHHHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NFITK---ISRYNKVVNI-----PNSMTVLDELLPISIEMA 582 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~---~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~ 582 (668)
+.| .+|..+|++++. .+++++++|++.++++. .+... ....+..... ..++++++|+|+++..++
T Consensus 128 ~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (307)
T 2gas_A 128 QVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202 (307)
T ss_dssp HHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence 578 999999999875 46889999998777653 11111 1111222211 237899999999999999
Q ss_pred hcc--CCceeeecCC-CccCHHHHHHHHHhhcCCCCCCCCCCHHH
Q 005949 583 KRN--LRGIWNFTNP-GVVSHNEILEMYKKYINPEFKWVNFTLEE 624 (668)
Q Consensus 583 ~~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 624 (668)
.++ .+++|++.++ +.+|+.|+++.+.+.+|.+..+..++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 247 (307)
T 2gas_A 203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQ 247 (307)
T ss_dssp TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHHH
T ss_pred cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHHH
Confidence 865 3567888764 78999999999999999988777666543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=175.87 Aligned_cols=221 Identities=17% Similarity=0.149 Sum_probs=158.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 80 (668)
+|++|||||+|+||++++++|+++|.++.|++.+|... .++.+... ...++.++.+|++|.+.+.+++.. .+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEA--PLKKLKEK-YGDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHH--HHHHHHHH-HGGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHH--HHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 57999999999999999999999987899999888642 12111111 124688999999999998887743 37
Q ss_pred CCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 81 IDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 81 ~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
+|+|||+||.... ..+.+++...+++|+.++.++++++ ++.+ .++|++||...+....
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~----------- 145 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFS----------- 145 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSC-----------
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCC-----------
Confidence 9999999997532 2233445678999999999999887 4434 7999999977654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCC-------ChHHHHHHHHHcCCCceeecCCCceE
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPE-------KLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...+.+.+.++.+. ++++..++||.|.++..... ..............+ ..
T Consensus 146 ---~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 213 (254)
T 3kzv_A 146 ---SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NN 213 (254)
T ss_dssp ---CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC
T ss_pred ---CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cC
Confidence 24579999999999999988775 89999999999998864211 001122222221111 12
Q ss_pred eceeHHHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKG----EVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~ 254 (668)
.+.+.+|+|++++.++... ..|+.+++.++.
T Consensus 214 r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~ 248 (254)
T 3kzv_A 214 QLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA 248 (254)
T ss_dssp ----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred CcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence 3668899999999888765 257788887654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-20 Score=177.77 Aligned_cols=223 Identities=18% Similarity=0.215 Sum_probs=161.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|..+++|++|||||+|+||++++++|+++ +++|++.+|... ..+..... ...++.++.+|++|.+++.++++.
T Consensus 1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 1 TERLAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAE--GAKAAAAS-IGKKARAIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHHH-HCTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCcCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 56678899999999999999999999999 688999988642 11111111 134688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... .+.+++...+++|+.++.+++++ +++.+...++|++||...+....
T Consensus 76 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 148 (247)
T 3rwb_A 76 ALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP------- 148 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-------
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-------
Confidence 3799999999976432 23345567899999999999887 44444357999999977654332
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|.++.... ......+.... . ..
T Consensus 149 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~---------~~ 209 (247)
T 3rwb_A 149 -------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---Q---------AM 209 (247)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---S---------SS
T ss_pred -------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---c---------cc
Confidence 2457999999999999988766 58999999999998763211 01111111110 0 11
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+...+|+++++..++... ..|+.+++.+|.
T Consensus 210 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 23568899999999888654 257889998774
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-20 Score=182.93 Aligned_cols=237 Identities=15% Similarity=0.044 Sum_probs=158.5
Q ss_pred CCCC-CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATY-TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~-~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|+.| ++++||||||+|+||+++++.|+++ +++|++++|...... ...+.......++.++.+|++|.+.+.++++
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR 78 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHH
Confidence 5554 4679999999999999999999999 688999888642110 0111111112358899999999999888774
Q ss_pred c-----CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHH----HHHHHHcC--CCcEEEEEcCccccCCCCCCcCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVL----LEACKVTG--QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l----~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
. .++|+|||+||... .+++...+++|+.++..+ ++.+++.+ ..+++|++||...+.+..
T Consensus 79 ~~~~~~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 148 (267)
T 2gdz_A 79 KVVDHFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------ 148 (267)
T ss_dssp HHHHHHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------
T ss_pred HHHHHcCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC------
Confidence 3 36899999999753 466778999998866554 44444432 247999999988765432
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHH-----HhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCc-eeecCCC
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYG-----RSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPL-PIHGDGS 220 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 220 (668)
+...|+.+|...+.+.+.++ ...++++.+++||.|.++.... .... .....-... .......
T Consensus 149 --------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~--~~~~~~~~~~~~~~~~~ 216 (267)
T 2gdz_A 149 --------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES--IEKE--ENMGQYIEYKDHIKDMI 216 (267)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG--GGCH--HHHGGGGGGHHHHHHHH
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc--cccc--cccchhhhHHHHHHHHh
Confidence 23469999999999988742 2358999999999998763210 0000 000000000 0000000
Q ss_pred ceEeceeHHHHHHHHHHHHhcC-CCCceEEEcCCCcccHHHH
Q 005949 221 NVRSYLYCEDVAEAFECILHKG-EVGHVYNVGTKKERRVIDV 261 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~-~~~~~~ni~~~~~~s~~el 261 (668)
.+..+++++|+|++++.++... ..|+++++.+++..++.|+
T Consensus 217 ~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 217 KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 1224679999999999998764 3678999998887766553
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-19 Score=171.46 Aligned_cols=216 Identities=16% Similarity=0.148 Sum_probs=157.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---CC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---ES 80 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~ 80 (668)
.++|+||||||+|+||++++++|++++ ++.|++.+|... .....+.++.+|++|.+++.+++.. .+
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~-g~~v~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 70 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNK-NHTVINIDIQQS----------FSAENLKFIKADLTKQQDITNVLDIIKNVS 70 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTST-TEEEEEEESSCC----------CCCTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcC-CcEEEEeccccc----------cccccceEEecCcCCHHHHHHHHHHHHhCC
Confidence 356799999999999999999999832 788888887532 1124678999999999998887742 27
Q ss_pred CCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 81 ~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
+|+|||+||.... ..+.+++...+++|+.++.++++++...- .-.++|++||...+.... +
T Consensus 71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------~ 136 (244)
T 4e4y_A 71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP--------------N 136 (244)
T ss_dssp EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT--------------T
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC--------------C
Confidence 9999999997542 22334556789999999999999887642 114899999987764432 2
Q ss_pred CChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHH-----------HHHHHHcCCCceeecCCCc
Q 005949 156 TNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPK-----------FILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 221 (668)
...|+.+|...+.+.+.++.+ +++++.+++||.|.++... ..... ........ ..
T Consensus 137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------~p 205 (244)
T 4e4y_A 137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR--NLIQKYANNVGISFDEAQKQEEKE---------FP 205 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH--HHHHHHHHHHTCCHHHHHHHHHTT---------ST
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH--HHHHhhhhhcCCCHHHHHHHHhhc---------CC
Confidence 346999999999999998763 4899999999999876321 11111 11111111 12
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
...+.+++|+|++++.++... ..|+.+++.+|..
T Consensus 206 ~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 206 LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence 234778999999999998653 2578999987753
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-20 Score=187.86 Aligned_cols=203 Identities=19% Similarity=0.254 Sum_probs=149.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc---------------------------ccccccCChhHHHHHhhhcCCCEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------------YGKGRLEDCSSLIADVQSVKPTHV 435 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------------~~~~D~~d~~~~~~~l~~~~~d~V 435 (668)
||+|+|||||||||+++++.|+++|++|. ++.+|++|++++.++++++ |+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV--DVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCC--CEE
Confidence 57899999999999999999999998652 2457888999999999876 999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC-CC
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT-GS 513 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~-~~ 513 (668)
||+|+.. ++.++.+++++|++.+ ++.+++| +|+.. .++..+..| .+
T Consensus 82 i~~a~~~------------------~~~~~~~l~~aa~~~g~v~~~v~S---~~g~~-----------~~~~~~~~p~~~ 129 (308)
T 1qyc_A 82 ISTVGSL------------------QIESQVNIIKAIKEVGTVKRFFPS---EFGND-----------VDNVHAVEPAKS 129 (308)
T ss_dssp EECCCGG------------------GSGGGHHHHHHHHHHCCCSEEECS---CCSSC-----------TTSCCCCTTHHH
T ss_pred EECCcch------------------hhhhHHHHHHHHHhcCCCceEeec---ccccC-----------ccccccCCcchh
Confidence 9999844 1567899999999998 8776643 34321 112223333 35
Q ss_pred cchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--hHHHH---hhcccceeec-----CCCcccHhhHHHHHHHHHh
Q 005949 514 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--NFITK---ISRYNKVVNI-----PNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--~~~~~---~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~~ 583 (668)
.| .+|..+|++++. .+++++++|++.++++. .+... ....+..... ..++++++|+|+++..+++
T Consensus 130 ~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp HH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred HH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence 68 999999999876 46888999987666542 11111 1111122111 2378999999999999997
Q ss_pred cc--CCceeeecCC-CccCHHHHHHHHHhhcCCCCCCCCCCHHH
Q 005949 584 RN--LRGIWNFTNP-GVVSHNEILEMYKKYINPEFKWVNFTLEE 624 (668)
Q Consensus 584 ~~--~~g~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 624 (668)
++ .+++|+++++ +.+|+.|+++.+.+.+|.+..+..++..+
T Consensus 205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 248 (308)
T 1qyc_A 205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE 248 (308)
T ss_dssp CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHHH
Confidence 65 4568888764 78999999999999999998776666543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.5e-19 Score=176.06 Aligned_cols=226 Identities=16% Similarity=0.081 Sum_probs=163.7
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+| +||+++++.|+++ +++|++.+|..... ....+.. ...++.++.+|++|.+++.++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAE--SLGVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHH--HHTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHH--hcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 4568999999998 9999999999999 78899998864211 0111111 112468899999999998888753
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~------ 177 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP------ 177 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT------
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC------
Confidence 379999999997642 23344567899999999999999887642 135999999987654322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++...................++ .
T Consensus 178 --------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~ 240 (296)
T 3k31_A 178 --------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------R 240 (296)
T ss_dssp --------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------S
T ss_pred --------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------C
Confidence 24579999999999999987664 899999999999998653222222222222222221 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+...+|+|++++.++... ..|+.+++.+|..+
T Consensus 241 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence 3567899999999988753 35889999988654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=178.44 Aligned_cols=227 Identities=12% Similarity=0.085 Sum_probs=159.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC--CCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI--PSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++++++|||||+|+||++++++|+++ +++|+++++..... ..... ......++.++.+|++|.+.+.+++..
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDH-VSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVL 98 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHH-HHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 345689999999999999999999999 78888887543211 11100 011235789999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+....
T Consensus 99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------- 170 (269)
T 3gk3_A 99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAF------- 170 (269)
T ss_dssp HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT-------
T ss_pred HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCC-------
Confidence 2799999999976432 23344567899999999999887643 23 57999999976654322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++.... ...... .... ........
T Consensus 171 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~----~~~~----~~~~~~~~ 233 (269)
T 3gk3_A 171 -------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA--VPQDVL----EAKI----LPQIPVGR 233 (269)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------CCS----GGGCTTSS
T ss_pred -------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh--hchhHH----HHHh----hhcCCcCC
Confidence 24579999999999998877653 8999999999999876421 111110 1000 11112234
Q ss_pred ceeHHHHHHHHHHHHhcCC---CCceEEEcCCCccc
Q 005949 225 YLYCEDVAEAFECILHKGE---VGHVYNVGTKKERR 257 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s 257 (668)
+.+++|+|++++.++.... .|+.+++.+|..++
T Consensus 234 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 234 LGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred ccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence 6789999999998887543 57899999886543
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=169.02 Aligned_cols=219 Identities=19% Similarity=0.152 Sum_probs=157.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++++|... .+..+... .++.++.+|++|.+++.+++..
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEG--PLREAAEA---VGAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHT---TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH---cCCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 688999888532 11111111 1378899999999998887743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ...+++|++||...++..
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------ 143 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------ 143 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------
Confidence 3699999999975422 223445678899999999998877543 125799999998744332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++.... .............+. ..+++.
T Consensus 144 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~---------~~~~~~ 209 (245)
T 1uls_A 144 ---GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK--VPEKVREKAIAATPL---------GRAGKP 209 (245)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS--SCHHHHHHHHHTCTT---------CSCBCH
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh--cCHHHHHHHHhhCCC---------CCCcCH
Confidence 1346999999999999887765 38999999999998875421 111222222221111 136789
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 229 EDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 229 ~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+|+|++++.++... ..|+.+++.+|..
T Consensus 210 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence 99999999888653 2577888887753
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.8e-19 Score=173.95 Aligned_cols=226 Identities=15% Similarity=0.079 Sum_probs=160.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++.+|... .+..+... ...++..+.+|++|.+.+.++++.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNED--AAVRVANE-IGSKAFGVRVDVSSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH-hCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999 688999988642 11111111 134688999999999998887743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...+++...+++|+.|+.++++++... ....++|++||...+....
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 168 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA----------- 168 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC-----------
Confidence 2799999999975432 223445578889999999988877431 1246999999987764432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF----PEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++... ............... .....
T Consensus 169 ---~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r 236 (277)
T 4dqx_A 169 ---DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR---------AVMDR 236 (277)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT---------STTCS
T ss_pred ---CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc---------CcccC
Confidence 24579999999999999887654 899999999999876310 000011111111121 12234
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
+.+++|+|++++.++... ..|+.+++.+|...+
T Consensus 237 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 237 MGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred CcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 678999999999988653 258899999887543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=178.37 Aligned_cols=229 Identities=17% Similarity=0.090 Sum_probs=161.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--------------CccccCC--CcCCCCeEEEEccCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--------------NLKNLIP--SKASSNFKFVKGDIA 67 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--------------~~~~~~~--~~~~~~~~~~~~Dl~ 67 (668)
+++|++|||||+|+||+++++.|+++ +++|++++|..... .+..... .....++.++.+|++
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 45789999999999999999999999 78899888752110 0100000 112346899999999
Q ss_pred CHHHHHHHhcc-----CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCc
Q 005949 68 SADLVNFLLIT-----ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTD 133 (668)
Q Consensus 68 d~~~~~~~~~~-----~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~ 133 (668)
|.+.+.++++. .++|+|||+||..... .+.+++...+++|+.++.++++++... +...++|++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 99998887742 3799999999975432 233456678999999999999877542 223699999998
Q ss_pred cccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHH-------
Q 005949 134 EVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKF------- 203 (668)
Q Consensus 134 ~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~------- 203 (668)
..+.... ....|+.+|...+.+.+.++.+ +++++.+++||.|..+..........+
T Consensus 167 ~~~~~~~--------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 232 (286)
T 3uve_A 167 GGLKAYP--------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENP 232 (286)
T ss_dssp GGTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSC
T ss_pred hhccCCC--------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccccccc
Confidence 7764432 2456999999999999988766 489999999999998865321111000
Q ss_pred -----HHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 204 -----ILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 204 -----~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
........ ... ..+.+.+|+|++++.++... ..|+.+++.+|..+
T Consensus 233 ~~~~~~~~~~~~~-------~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 233 GPDDMAPICQMFH-------TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp CHHHHHHHHHTTC-------SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred chhhHHHHHHhhh-------ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 00000111 111 35789999999999988643 35889999987643
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-19 Score=172.82 Aligned_cols=201 Identities=16% Similarity=0.103 Sum_probs=148.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCC-----EEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEY-----KIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~-----~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
+|+||||||+|+||++++++|+++|+.. +|++++|... ....+... ....++.++.+|++|.+.+.+++..
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA--DLEKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH--HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH--HHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 5789999999999999999999994321 8988888532 11111111 1134688999999999998887742
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ .+++|++||...+.+..
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----- 153 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR----- 153 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCC-----
Confidence 3799999999975432 23345667889999999999988743 23 58999999988765432
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...|.+++.++.+ .+++++++|||.|++|...... ... .
T Consensus 154 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~~~---------~ 204 (244)
T 2bd0_A 154 ---------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-----------DEM---------Q 204 (244)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-----------STT---------G
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-----------ccc---------c
Confidence 3457999999999999877653 4899999999999998642110 000 1
Q ss_pred EeceeHHHHHHHHHHHHhcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..+++++|+|++++.++..+.
T Consensus 205 ~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 205 ALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp GGSBCHHHHHHHHHHHHTSCT
T ss_pred ccCCCHHHHHHHHHHHHhCCc
Confidence 257899999999999998654
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.6e-19 Score=176.24 Aligned_cols=227 Identities=15% Similarity=0.050 Sum_probs=161.1
Q ss_pred CCCCCeEEEEcCCCh--hHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 3 TYTPKNILITGAAGF--IASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~--iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
.+++|+||||||+|+ ||+++++.|+++ +++|++.+|.... .....+.. ...++.++.+|++|.+++.++++.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAE--ELGAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHH--HHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHH--hcCCceEEECCCCCHHHHHHHHHHH
Confidence 355789999999988 999999999999 6889888886321 01111111 113588999999999998887743
Q ss_pred ----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----- 178 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP----- 178 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT-----
T ss_pred HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC-----
Confidence 379999999997641 23344566789999999999999887532 236999999987754322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|.+.+.+.+.++.+ +++++.+++||.|.++...................++
T Consensus 179 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------- 240 (293)
T 3grk_A 179 ---------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--------- 240 (293)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------
Confidence 2457999999999999998765 3899999999999987543222222333332222221
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
..+...+|+|++++.++... ..|+.+++.+|..+
T Consensus 241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV 277 (293)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence 23568899999999888653 35889999988653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=172.93 Aligned_cols=222 Identities=17% Similarity=0.136 Sum_probs=155.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
|++|+||||||+|+||+++++.|+++ +++|++++|... ...+.+... ....++.++.+|++|.+.+.++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNE-QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD 78 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 688988887321 111111100 1134688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+++. +.+ .+++|++||...+.+..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 149 (246)
T 2uvd_A 79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNP-------- 149 (246)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT--------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCC--------
Confidence 3799999999975432 2334456789999999777766553 334 58999999976643321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.+ .++++++++||.+.++...... ...........+ ...+
T Consensus 150 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p---------~~~~ 212 (246)
T 2uvd_A 150 ------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIP---------AAQF 212 (246)
T ss_dssp ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCT---------TCSC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCC---------CCCC
Confidence 2356999999999998887654 4899999999999987542111 111111111111 1247
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
++.+|+|++++.++..+ ..|+.+++.+|.
T Consensus 213 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 213 GEAQDIANAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence 89999999999988653 257889988764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=178.82 Aligned_cols=232 Identities=17% Similarity=0.085 Sum_probs=164.6
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.++|+||||||+ |+||++++++|+++ +++|++++|..... .+..+.. ...++.++.+|++|.+.+.++++.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAA--EFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHH--HTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHH--HcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999 99999999999999 67899988863211 1111111 123478999999999998887743
Q ss_pred ---CCCCEEEEcCccCCc---------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ---ESIDTIMHFAAQTHV---------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+....
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----- 162 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP----- 162 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC-----
Confidence 378999999997643 13344566789999999999999887531 135899999987654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|..+........+.+........++
T Consensus 163 ---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--------- 224 (271)
T 3ek2_A 163 ---------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL--------- 224 (271)
T ss_dssp ---------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------
T ss_pred ---------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------
Confidence 24579999999999999987654 899999999999987653222223333333322221
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHHHHH
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVIDVA 262 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~el~ 262 (668)
..+...+|+|++++.++... ..|+.+++.+|...++.++.
T Consensus 225 ~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~ 267 (271)
T 3ek2_A 225 KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA 267 (271)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence 23568999999999988753 35889999999877766554
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.7e-19 Score=172.92 Aligned_cols=208 Identities=15% Similarity=0.083 Sum_probs=150.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
++|+||||||+|+||+++++.|+++ +++|++++|... .++.+ ...++.++.+|++|.+++.+++.. .
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVE--RLKAL----NLPNTLCAQVDVTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHH--HHHTT----CCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHh----hcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence 4679999999999999999999999 678888888532 12111 123788999999999998887743 3
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||..... ...+++...+++|+.|+.++++++. +.+ ..++|++||...+....
T Consensus 87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~----------- 154 (266)
T 3p19_A 87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFP----------- 154 (266)
T ss_dssp SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCC-----------
Confidence 799999999976432 2233455788999999999777653 334 57999999987764432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++....... .......... ..+ ...++++
T Consensus 155 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~-~~~-------~~r~~~p 222 (266)
T 3p19_A 155 ---DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAW-RVD-------MGGVLAA 222 (266)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC-HHHHHHHHHH-HHH-------TTCCBCH
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc-hhhhHHHHhh-ccc-------ccCCCCH
Confidence 2457999999999999988766 48999999999999885421111 0111111000 001 1136789
Q ss_pred HHHHHHHHHHHhcCCC
Q 005949 229 EDVAEAFECILHKGEV 244 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~~ 244 (668)
+|+|++++.++..+..
T Consensus 223 edvA~av~~l~~~~~~ 238 (266)
T 3p19_A 223 DDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHcCCCC
Confidence 9999999999998754
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.1e-19 Score=173.99 Aligned_cols=206 Identities=14% Similarity=0.107 Sum_probs=146.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++++||||||+|+||++++++|+++ +++|++++|.... ++.+.. .....++.++.+|++|.+.+.+++..
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEK--LRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 56677899999999999999999999999 6889999886421 111111 11234688999999999998887743
Q ss_pred -----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ....+||++||...+....
T Consensus 100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 174 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA----- 174 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT-----
T ss_pred HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC-----
Confidence 379999999997321 2233445678999999999999876431 2257999999987654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|.+.+.+++.++.+ .++++.+++||.|..+.... . .. ....
T Consensus 175 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~--------~~---------~~~~ 226 (262)
T 3rkr_A 175 ---------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG--L--------SA---------KKSA 226 (262)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc--c--------cc---------cccc
Confidence 2457999999999999988765 48999999999998764311 0 00 0012
Q ss_pred EeceeHHHHHHHHHHHHhcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..++..+|+|++++.++....
T Consensus 227 ~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 227 LGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp --CCCHHHHHHHHHHHHTCCT
T ss_pred ccCCCHHHHHHHHHHHhcCcc
Confidence 346789999999999987654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.3e-19 Score=172.90 Aligned_cols=223 Identities=16% Similarity=0.102 Sum_probs=157.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+|++|||||+|+||+++++.|+++ +++|++++|......+...... ....++.++.+|++|.+.+.+++..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999 6889888885432001111110 1134688999999999998877742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCC-cEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQI-RRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~-~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... + . +++|++||...+.+..
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------- 149 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFP--------- 149 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCT---------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCC---------
Confidence 3799999999975432 233455678999999999999887652 4 4 7999999987654321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH-----------HHHHHHHcCCCcee
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP-----------KFILLAMRGLPLPI 215 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~ 215 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++... .... .........
T Consensus 150 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----- 217 (258)
T 3a28_C 150 -----ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE--QIDAELSKINGKPIGENFKEYSSS----- 217 (258)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH--HHHHHHHHHHCCCTTHHHHHHHTT-----
T ss_pred -----CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh--hhhhhhccccCCchHHHHHHHHhc-----
Confidence 2457999999999999988765 3899999999999876320 0000 001111111
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.....+.+.+|+|++++.++... ..|+.+++.+|...
T Consensus 218 ----~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 218 ----IALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp ----CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred ----CCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 11124789999999999988653 35788999877543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-18 Score=167.18 Aligned_cols=213 Identities=15% Similarity=0.122 Sum_probs=153.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++.+|... . ...+..+.+|++|.+++.++++.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~---------~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 85 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGE--P---------PEGFLAVKCDITDTEQVEQAYKEIEETH 85 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSC--C---------CTTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChH--h---------hccceEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999 688998888532 1 12378899999999998877643
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++.. .+ ..++|++||...+....
T Consensus 86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------- 154 (253)
T 2nm0_A 86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSA---------- 154 (253)
T ss_dssp CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHH----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC----------
Confidence 368999999997542 224566788999999999999987653 23 57999999976643211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.|.++.... ............. ....+++
T Consensus 155 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~---------p~~~~~~ 219 (253)
T 2nm0_A 155 ----GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV--LTDEQRANIVSQV---------PLGRYAR 219 (253)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTC---------TTCSCBC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh--cCHHHHHHHHhcC---------CCCCCcC
Confidence 13469999999999999887653 7999999999998774311 1011111111111 1124789
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+|+|++++.++..+ ..|+.+++.+|..
T Consensus 220 p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~ 250 (253)
T 2nm0_A 220 PEEIAATVRFLASDDASYITGAVIPVDGGLG 250 (253)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence 999999999988653 2577898887754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-19 Score=172.92 Aligned_cols=222 Identities=15% Similarity=0.122 Sum_probs=157.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----C
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----E 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 79 (668)
+++|++|||||+|+||++++++|+++ +++|++++|.... .... ...++.++.+|++|.+++.++++. .
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~-~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGED-VVAD-----LGDRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHH-HHHH-----TCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHH-HHHh-----cCCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999 6889998884321 1111 135789999999999998887742 3
Q ss_pred CCCEEEEcCccCCcc--------cccCChHHHHHHHHHHHHHHHHHHHHc-----------CCCcEEEEEcCccccCCCC
Q 005949 80 SIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKVT-----------GQIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~-----------~~~~~~v~~SS~~vyg~~~ 140 (668)
++|+|||+||..... ...+++...+++|+.++.++++++... ..-.++|++||...+....
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tl3_A 79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI 158 (257)
T ss_dssp CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence 799999999975321 334556789999999999999887653 1235899999987654322
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeec
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|..+.... .............+.
T Consensus 159 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~---- 218 (257)
T 3tl3_A 159 --------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS--LPEEARASLGKQVPH---- 218 (257)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSS----
T ss_pred --------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh--ccHHHHHHHHhcCCC----
Confidence 2346999999999999888765 38999999999999886421 222222222222111
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKERR 257 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~s 257 (668)
...+.+.+|+|++++.+++.+. .|+.+++.+|..++
T Consensus 219 ----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 219 ----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp ----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred ----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 0246789999999999988643 57899998886543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=173.93 Aligned_cols=229 Identities=15% Similarity=0.098 Sum_probs=161.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC----------CccccCC--CcCCCCeEEEEccCCCHHH
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS----------NLKNLIP--SKASSNFKFVKGDIASADL 71 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~----------~~~~~~~--~~~~~~~~~~~~Dl~d~~~ 71 (668)
+++|++|||||+|+||+++++.|+++ +++|++++|..... .+..... .....++.++.+|++|.+.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 45789999999999999999999999 78899888763211 0000000 1123578999999999999
Q ss_pred HHHHhcc-----CCCCEEEEcCccCCccc-----ccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccC
Q 005949 72 VNFLLIT-----ESIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYG 137 (668)
Q Consensus 72 ~~~~~~~-----~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg 137 (668)
+.++++. .++|+|||+||...... ..+++...+++|+.++.++++++... +...++|++||...+.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~ 183 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR 183 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 8887742 37999999999754322 33455679999999999999876542 2357999999987764
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh------------HHH
Q 005949 138 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL------------IPK 202 (668)
Q Consensus 138 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~------------~~~ 202 (668)
... +...|+.+|.+.+.+.+.++.++ ++++.+++||.|.++....... ...
T Consensus 184 ~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 249 (299)
T 3t7c_A 184 GAE--------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVED 249 (299)
T ss_dssp CCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHH
T ss_pred CCC--------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhH
Confidence 332 24579999999999999987764 8999999999999986521100 000
Q ss_pred HHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 203 FILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
+........ ... ..+...+|+|++++.++... ..|+.+++.+|..+
T Consensus 250 ~~~~~~~~~-------~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 250 FQVASRQMH-------VLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHHHHHHHS-------SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhhhhc-------ccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 000000000 001 24678999999999988654 35889999987643
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-19 Score=172.71 Aligned_cols=230 Identities=17% Similarity=0.095 Sum_probs=155.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+|+||||||+|+||++++++|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDAT--AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 77 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999 6789998886421 1111110 1134688999999999998887742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc----CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... +...++|++||...+.+..
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 147 (256)
T 1geg_A 78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP---------- 147 (256)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC----------
Confidence 2799999999975422 223345678999999998888766542 2146999999976643321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc-CCC-ceeecCCCceEec
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR-GLP-LPIHGDGSNVRSY 225 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++... .....+...... ... ............+
T Consensus 148 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 221 (256)
T 1geg_A 148 ----ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA--EIDRQVSEAAGKPLGYGTAEFAKRITLGRL 221 (256)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH--HHHHHHHHHHTCCTTHHHHHHHTTCTTCSC
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh--hhhhhccccccCChHHHHHHHHhcCCCCCC
Confidence 2347999999999999988765 4899999999999886321 010000000000 000 0000000111247
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+.+|+|++++.++..+ ..|+.+++.+|..
T Consensus 222 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 222 SEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 89999999999888653 3578899987753
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=168.44 Aligned_cols=204 Identities=16% Similarity=0.129 Sum_probs=153.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|+|+||||||+|+||++++++|+++ +++|++++|.... .....+.+|++|.+.+.++++. .
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~------------~~~~~~~~d~~d~~~v~~~~~~~~~~~g 86 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENP------------NADHSFTIKDSGEEEIKSVIEKINSKSI 86 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCT------------TSSEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccc------------ccccceEEEeCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999 6889999986421 1124578999999998877743 3
Q ss_pred CCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+.+..
T Consensus 87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 153 (251)
T 3orf_A 87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS------------- 153 (251)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC-------------
Confidence 68999999997532 22334556788999999999999887632 124899999987764322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|.+.+.+++.++.+ .++++.+++||.|.++. ........ ....+++.
T Consensus 154 -~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~----------~~~~~~~~---------~~~~~~~~ 213 (251)
T 3orf_A 154 -GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT----------NRKYMSDA---------NFDDWTPL 213 (251)
T ss_dssp -TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH----------HHHHCTTS---------CGGGSBCH
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc----------hhhhcccc---------cccccCCH
Confidence 2457999999999999998876 47999999999987652 12211111 23357889
Q ss_pred HHHHHHHHHHHhc-C---CCCceEEEcCCCc
Q 005949 229 EDVAEAFECILHK-G---EVGHVYNVGTKKE 255 (668)
Q Consensus 229 ~D~a~ai~~~~~~-~---~~~~~~ni~~~~~ 255 (668)
+|+|++++.++.. . ..|+.+++..+..
T Consensus 214 ~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 214 SEVAEKLFEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp HHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred HHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence 9999999999877 2 2577888876654
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-19 Score=174.57 Aligned_cols=193 Identities=13% Similarity=0.057 Sum_probs=144.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~ 442 (668)
|+|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.+ ++|+|||+||..
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~ 87 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV 87 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCccc
Confidence 689999999999999999999999865 23467999999999998865 579999999976
Q ss_pred CCC-CccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 443 GRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 443 ~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
... ......++....+++|+.++.++++++... + .++|++||..+|.. .++.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~Y 149 (244)
T 1cyd_A 88 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT------------------FPNLITY 149 (244)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------------------CTTBHHH
T ss_pred CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC------------------CCCcchh
Confidence 210 111223455678899999999999988664 4 37888888776522 1234689
Q ss_pred hhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 516 SKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
+.||...|.+++.+... .++++.+++|+.++++.. ++..+..+. ....+++++|+|++++.++..
T Consensus 150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~l~~~ 225 (244)
T 1cyd_A 150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH----PLRKFAEVEDVVNSILFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS----TTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcC----CccCCCCHHHHHHHHHHHhCc
Confidence 99999999999887533 589999999999999852 112222211 124789999999999999975
Q ss_pred c----CCceeeecCCCcc
Q 005949 585 N----LRGIWNFTNPGVV 598 (668)
Q Consensus 585 ~----~~g~~ni~~~~~~ 598 (668)
+ .++.+++.++..+
T Consensus 226 ~~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 226 RSASTSGGGILVDAGYLA 243 (244)
T ss_dssp GGTTCCSSEEEESTTGGG
T ss_pred hhhcccCCEEEECCCccC
Confidence 4 3568888877543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-19 Score=178.50 Aligned_cols=209 Identities=14% Similarity=0.092 Sum_probs=156.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|+|
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 96 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 96 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999999999999864 23567999999988888754 68999
Q ss_pred EEcccccCC---CCccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGR---PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 436 ih~a~~~~~---~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
||+||.... +......++....+++|+.++.++++++... +. ++|++||..+|...
T Consensus 97 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 160 (278)
T 2bgk_A 97 FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG---------------- 160 (278)
T ss_dssp EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----------------
T ss_pred EECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC----------------
Confidence 999997621 0112223455678899999999999998764 33 78888887766321
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh---------HHHHhhcccceeecCCCcccHhhHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---------FITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
+ .+.+.|+.||...|.+++.+.. ..++++.+++|+.++++.. +...+.... ......+++.+|+|
T Consensus 161 ~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva 237 (278)
T 2bgk_A 161 E-GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA--ANLKGTLLRAEDVA 237 (278)
T ss_dssp T-TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT--CSSCSCCCCHHHHH
T ss_pred C-CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc--cccccccCCHHHHH
Confidence 0 1346899999999999888743 3589999999999998841 111111110 11124588999999
Q ss_pred HHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhc
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYI 611 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~ 611 (668)
++++.++... .+.+|++.++..+++.|+++.+.+.+
T Consensus 238 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 238 DAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred HHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 9999999643 36699999999999999999887654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-19 Score=174.91 Aligned_cols=224 Identities=16% Similarity=0.176 Sum_probs=158.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC-CCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI-PSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.+++||||||+|+||++++++|+++ +++|++.++........... ......++.++.+|++|.+++.++++.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4689999999999999999999999 78888877432211110000 011234688999999999998887743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++.+++ ++.+ ..++|++||...+.+..
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------- 158 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF---------- 158 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCS----------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCC----------
Confidence 2799999999976432 233455678999999988887665 3434 57999999976654322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|.++... ...+..........+. ..+.+
T Consensus 159 ----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~---------~~~~~ 223 (256)
T 3ezl_A 159 ----GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK--AIRPDVLEKIVATIPV---------RRLGS 223 (256)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHHHSTT---------SSCBC
T ss_pred ----CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc--ccCHHHHHHHHhcCCC---------CCCcC
Confidence 3457999999999999888765 4899999999999876431 1122233333222211 23568
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+|+|++++.++... ..|+.+++.+|..+
T Consensus 224 ~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 224 PDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 999999999888543 35789999887643
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-19 Score=175.95 Aligned_cols=214 Identities=19% Similarity=0.165 Sum_probs=147.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
..+++++||||||+|+||+++++.|+++ +++|++++|... ....+.. .....++.++.+|++|.+.+.++++
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 103 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVG--NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS 103 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChH--HHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHH
Confidence 3456789999999999999999999999 688999988532 1111110 1112357889999999999888774
Q ss_pred c-----CCCCEEEEcCccCCccc----ccCChHHHHHHHHHH----HHHHHHHHHHcCCC--cEEEEEcCccccCCCCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYG----THVLLEACKVTGQI--RRFIHVSTDEVYGETDED 142 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~--~~~v~~SS~~vyg~~~~~ 142 (668)
. .++|+|||+||...... ..+++...+++|+.+ ++.+++.+++.+ . +++|++||...+....
T Consensus 104 ~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~-- 180 (279)
T 1xg5_A 104 AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLP-- 180 (279)
T ss_dssp HHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCS--
T ss_pred HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCC--
Confidence 2 37999999999754321 233456788999999 677777777755 3 7999999988764321
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeec
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (668)
..+...|+.+|...+.+++.++.+ .++++.+++||.|.++... . ...........
T Consensus 181 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~------~----~~~~~~~~~~~ 240 (279)
T 1xg5_A 181 ----------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF------K----LHDKDPEKAAA 240 (279)
T ss_dssp ----------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH------H----HTTTCHHHHHH
T ss_pred ----------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh------h----hcccChhHHhh
Confidence 122457999999999999887654 4799999999999876310 0 00000000000
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
......+++++|+|++++.++..+.
T Consensus 241 -~~~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 241 -TYEQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp -HHC---CBCHHHHHHHHHHHHHSCT
T ss_pred -hcccccCCCHHHHHHHHHHHhcCCc
Confidence 0011246799999999999998654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=168.65 Aligned_cols=214 Identities=14% Similarity=0.125 Sum_probs=152.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|... ... .+..+.+|++|.+.+.++++.
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~---------~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSG--APK---------GLFGVEVDVTDSDAVDRAFTAVEEHQ 79 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSC--CCT---------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChH--HHH---------HhcCeeccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999 688999888532 111 122488999999998877743
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ...+++|++||...+....
T Consensus 80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 148 (247)
T 1uzm_A 80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG----------- 148 (247)
T ss_dssp SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC-----------
Confidence 379999999997542 2233456678999999999999877531 2268999999976543221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.+.++.... +............ ....+++.
T Consensus 149 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~---------p~~~~~~~ 214 (247)
T 1uzm_A 149 ---NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA--LDERIQQGALQFI---------PAKRVGTP 214 (247)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--SCHHHHHHHGGGC---------TTCSCBCH
T ss_pred ---CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh--cCHHHHHHHHhcC---------CCCCCcCH
Confidence 2457999999999999887765 48999999999998763210 0011111111111 11247899
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 229 EDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 229 ~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+|+|++++.++... ..|+.+++.+|..
T Consensus 215 ~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 215 AEVAGVVSFLASEDASYISGAVIPVDGGMG 244 (247)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence 99999999988643 2578899987754
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-19 Score=173.76 Aligned_cols=213 Identities=16% Similarity=0.116 Sum_probs=143.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|+.+++|++|||||+|+||+++++.|+++ +++|++.+|... .+....... ..++.++.+|++|.+.+.++++.
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 23 MSKTGKKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLD--ALQETAAEI-GDDALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp -----CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH-TSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 44456789999999999999999999999 688999988632 111111111 24688999999999998888743
Q ss_pred ---CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc----C-CCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ---ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT----G-QIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||.... +...+++...+++|+.++.++.+++... + ...++|++||...+.+..
T Consensus 98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----- 172 (272)
T 4dyv_A 98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP----- 172 (272)
T ss_dssp HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT-----
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC-----
Confidence 279999999997532 1233445678999999988888766532 1 136999999977654322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|..+.... ....... . ......
T Consensus 173 ---------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~--------~--~~~~~~ 231 (272)
T 4dyv_A 173 ---------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK--MKAGVPQ--------A--DLSIKV 231 (272)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh--hcccchh--------h--hhcccc
Confidence 2457999999999999988765 48999999999998875311 1100000 0 001122
Q ss_pred EeceeHHHHHHHHHHHHhcCCC
Q 005949 223 RSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
..+++++|+|++++.++..+..
T Consensus 232 ~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 232 EPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp ----CHHHHHHHHHHHHHSCTT
T ss_pred cCCCCHHHHHHHHHHHhCCCCc
Confidence 3478999999999999987653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-19 Score=170.31 Aligned_cols=216 Identities=15% Similarity=0.169 Sum_probs=154.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 80 (668)
+|++|||||+|+||+++++.|+++ +++|++++|.... . .... ++..+.+|++| +.+.++++. .+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~--~---~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEE--A---AQSL---GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHH--H---HHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--H---HHhh---CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 579999999999999999999999 6889999886432 1 1111 37789999999 766655431 37
Q ss_pred CCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 81 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
+|+|||+||..... ...+++...+++|+.++.++++++. +.+ .+++|++||...+....
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------ 137 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG------------ 137 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC------------
Confidence 99999999975421 2334566788999999999988773 334 68999999988876431
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
..+...|+.+|...+.+.+.++.+. +++++++|||.+.++........+.+........+ ...+.+.+
T Consensus 138 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~ 208 (239)
T 2ekp_A 138 PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPE 208 (239)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHH
Confidence 1234579999999999999887664 89999999999998753100000112222222111 12367999
Q ss_pred HHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 230 DVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 230 D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
|+|++++.++... ..|+.+++.+|.
T Consensus 209 dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 209 EIARVAAVLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence 9999999888643 257788888764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-18 Score=169.74 Aligned_cols=227 Identities=18% Similarity=0.143 Sum_probs=157.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|... ....+... ..++.++.+|++|.+.+.++++.
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDES--GGRALEQE--LPGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHH--hcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999 688999888532 11111111 12478899999999998887743
Q ss_pred CCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+.+..
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 149 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------- 149 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----------
Confidence 3799999999975421 122345678899999999999887531 0137999999975432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC-----CCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF-----PEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +++++.+++||.|+++... .......+. ......+ ..
T Consensus 150 ---~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~p---------~~ 216 (270)
T 1yde_A 150 ---QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIR-EGMLAQP---------LG 216 (270)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHH-HHHHTST---------TS
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHH-HHhhcCC---------CC
Confidence 1346999999999999988755 5899999999999987321 001111111 1111111 11
Q ss_pred eceeHHHHHHHHHHHHhcC--CCCceEEEcCCCcccHHH
Q 005949 224 SYLYCEDVAEAFECILHKG--EVGHVYNVGTKKERRVID 260 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~~~s~~e 260 (668)
.+...+|+|++++.++... ..|+.+++.+|......+
T Consensus 217 r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~ 255 (270)
T 1yde_A 217 RMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGC 255 (270)
T ss_dssp SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC--
T ss_pred CCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCc
Confidence 3568999999999887653 257889999887655433
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-19 Score=175.90 Aligned_cols=195 Identities=14% Similarity=0.097 Sum_probs=145.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999865 23458999999988887743 6899
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|||+||.......+....+....+++|+.++.++++++. +.+. +++++||...+.. .
T Consensus 92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~ 153 (255)
T 1fmc_A 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK------------------N 153 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC------------------C
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC------------------C
Confidence 999999762111122344566788999999999999885 3454 6777777665421 2
Q ss_pred CCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
++.+.|+.||...|.+++.+... .++++.+++|+.++++.. +...+....+ ...+.+++|+|++++
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~ 229 (255)
T 1fmc_A 154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP----IRRLGQPQDIANAAL 229 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS----SCSCBCHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCC----cccCCCHHHHHHHHH
Confidence 24478999999999998887533 489999999999998741 1222222111 135778999999999
Q ss_pred HHHhcc----CCceeeecCCCccCH
Q 005949 580 EMAKRN----LRGIWNFTNPGVVSH 600 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~s~ 600 (668)
.++... .+++||+.++..+|+
T Consensus 230 ~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 230 FLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred HHhCCccccCCCcEEEECCceeccC
Confidence 999753 356999999988774
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=178.98 Aligned_cols=227 Identities=11% Similarity=0.039 Sum_probs=161.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
.+++|++|||||+|+||++++++|+++ +++|++.+|.... ...... .....++.++.+|++|.+.+.+++..
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPR--VLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHH--HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 356789999999999999999999999 6799999886421 111100 01134689999999999998877743
Q ss_pred ----CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... ....+++...+++|+.++.++.+++.. .+ ..++|++||...+....
T Consensus 100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------ 172 (277)
T 4fc7_A 100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQA------ 172 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCT------
T ss_pred HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC------
Confidence 379999999996442 223445667899999999999988742 22 46999999977654322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCce
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.++ ++++.+++||.|.++..... ..............+ .
T Consensus 173 --------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~ 235 (277)
T 4fc7_A 173 --------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP---------L 235 (277)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST---------T
T ss_pred --------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC---------C
Confidence 23569999999999999887664 89999999999998732000 000111222222221 1
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
..+.+.+|+|++++.++... ..|+.+++.+|..++
T Consensus 236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccC
Confidence 23668999999999988743 358899999886544
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=166.93 Aligned_cols=206 Identities=13% Similarity=0.125 Sum_probs=150.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++|+||||||+|+||++++++|+++ +++|++++|.... . .....++.+|++|.+.+.++++.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~--~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSAND--Q--------ADSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCT--T--------SSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCccc--c--------ccccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 45679999999999999999999999 6899999886421 1 11356778999999988877642
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- ...++|++||...+.+..
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 138 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP---------- 138 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC----------
Confidence 379999999997542 22234456788999999999999887631 125999999987764321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|...+.+.+.++.+. ++++++++||.+.++.. ....... ....+
T Consensus 139 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~----------~~~~~~~---------~~~~~ 195 (236)
T 1ooe_A 139 ----SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN----------RKWMPNA---------DHSSW 195 (236)
T ss_dssp ----TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH----------HHHSTTC---------CGGGC
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch----------hhcCCCc---------ccccc
Confidence 24579999999999999988664 49999999999987621 1111111 11235
Q ss_pred eeHHHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG----EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~ 254 (668)
+..+|+|++++.++..+ ..|+.+++.++.
T Consensus 196 ~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 196 TPLSFISEHLLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp BCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred CCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence 67899999998666322 247778877654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-19 Score=177.23 Aligned_cols=201 Identities=12% Similarity=0.005 Sum_probs=147.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++++||||||+|+||+++++.|+++ +++|++++|.... ...+... ....++.++.+|++|.+.+.+++..
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHG--LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHH--HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 6889999886421 1111100 1134688999999999998877742
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...++....+++|+.++.++++++. +.+ .++||++||...+.+..
T Consensus 104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 175 (272)
T 1yb1_A 104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVP------- 175 (272)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHH-------
T ss_pred HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC-------
Confidence 3799999999975432 1223455788999999888777664 333 68999999987765421
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc------CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY------GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|.+.|.+++.++.+. +++++++|||.+.++.... .. . .
T Consensus 176 -------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-~~-------------~-------~ 227 (272)
T 1yb1_A 176 -------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-PS-------------T-------S 227 (272)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-TH-------------H-------H
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-cc-------------c-------c
Confidence 23469999999999999887654 7999999999999875321 00 0 1
Q ss_pred eEeceeHHHHHHHHHHHHhcCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
...+++.+|+|++++.++..+.
T Consensus 228 ~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 228 LGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HCCCCCHHHHHHHHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHHHHHHcCC
Confidence 1246789999999999998654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=171.11 Aligned_cols=221 Identities=15% Similarity=0.146 Sum_probs=156.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.... +..... .....++.++.+|++|.+.+.+++..
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEE--ASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999 6889998886321 111110 01134678899999999998877742
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccc-cCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEV-YGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~v-yg~~~~~~~~~ 146 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++. +.+ .+++|++||..+ +..
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------- 165 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT-------- 165 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccC--------
Confidence 3799999999975432 1223455788999999999988774 323 679999999763 211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChH--HHHHHHHHcCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLI--PKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 221 (668)
..+...|+.+|...+.+.+.++.+ .++++.+++||.+.++... ... +..........+
T Consensus 166 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~p--------- 228 (267)
T 1vl8_A 166 ------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE--AVFSDPEKLDYMLKRIP--------- 228 (267)
T ss_dssp ------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH--HHHTCHHHHHHHHHTCT---------
T ss_pred ------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc--ccccChHHHHHHHhhCC---------
Confidence 112457999999999999988765 4899999999999887531 111 112222222111
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+++.+|+|++++.++... ..|+.+++.+|.
T Consensus 229 ~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 229 LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence 113678899999999888653 257788888774
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-19 Score=171.69 Aligned_cols=210 Identities=10% Similarity=0.065 Sum_probs=141.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++++++|||||+|+||+++++.|+++ +++|++++|... .++.+... ....++.++.+|++|.+++.++++.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGE--KLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGG--GGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 45789999999999999999999999 688999998642 22111111 1134688999999999998888743
Q ss_pred -CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..++|++||...+.+..
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------- 150 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGS--------- 150 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCT---------
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCC---------
Confidence 378999999997543 22334456789999999999888763 333 47999999977654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCE-EEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPV-ITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|.+.+.+.+.++.++ ++++ .++.||.|..+.... ..+..... .......+ +
T Consensus 151 -----~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~--~~~~~~~~---------~~~~~~~~-~ 213 (252)
T 3h7a_A 151 -----GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE--RREQMFGK---------DALANPDL-L 213 (252)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc--cchhhhhh---------hhhcCCcc-C
Confidence 24579999999999999887653 7899 899999988764321 11111110 01111223 7
Q ss_pred eeHHHHHHHHHHHHhcCCC
Q 005949 226 LYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~~~ 244 (668)
+..+|+|++++.++..+..
T Consensus 214 ~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 214 MPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp CCHHHHHHHHHHHHHCCGG
T ss_pred CCHHHHHHHHHHHHhCchh
Confidence 8999999999999986543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.7e-19 Score=168.53 Aligned_cols=199 Identities=17% Similarity=0.088 Sum_probs=137.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
|+. ++++||||||+|+||++++++|+++ +++|++++|... .+..+... ..++..+.+|+.|.+.+.+++..
T Consensus 1 M~~-~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (234)
T 2ehd_A 1 MEG-MKGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEK--RLQALAAE--LEGALPLPGDVREEGDWARAVAAME 73 (234)
T ss_dssp ----CCCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCC-CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH--hhhceEEEecCCCHHHHHHHHHHHH
Confidence 554 3578999999999999999999999 688999988532 11111111 12688999999999998877642
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHH----HHHcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEA----CKVTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||..... ...+++...+++|+.++.++++. +++.+ .++||++||...+.+..
T Consensus 74 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------- 145 (234)
T 2ehd_A 74 EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFK------- 145 (234)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCT-------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCC-------
Confidence 3799999999975421 12344567889999999766554 44444 68999999987765321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.+ .+++++++|||.+.++.... .+ .. ..
T Consensus 146 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~---------~~----------~~ 196 (234)
T 2ehd_A 146 -------GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN---TP---------GQ----------AW 196 (234)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------
T ss_pred -------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc---cc---------cc----------cC
Confidence 2457999999999998887654 48999999999987763210 00 00 01
Q ss_pred ceeHHHHHHHHHHHHhcCC
Q 005949 225 YLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~ 243 (668)
+++.+|+|++++.++..+.
T Consensus 197 ~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 197 KLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp -CCHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHhCCCc
Confidence 4789999999999988653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=170.46 Aligned_cols=200 Identities=13% Similarity=0.035 Sum_probs=147.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCC-CCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHhccC--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYP-EYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLLITE-- 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~-~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 79 (668)
+++++||||||+|+||++++++|+++|. +++|++++|.... ...+.. .....++.++.+|++|.+.+.+++...
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ--AKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS--CHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhh--hHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 4578999999999999999999999841 1899999886432 111110 001347899999999999988877421
Q ss_pred -----CCCEEEEcCccCC-----cccccCChHHHHHHHHHHHHHHHHHHHHc----------CC----CcEEEEEcCccc
Q 005949 80 -----SIDTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACKVT----------GQ----IRRFIHVSTDEV 135 (668)
Q Consensus 80 -----~~d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~----~~~~v~~SS~~v 135 (668)
++|+|||+||... .....++....+++|+.++.++++++... +. ..+||++||...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 6999999999765 12233445678899999999999888643 10 368999999887
Q ss_pred cCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCC
Q 005949 136 YGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLP 212 (668)
Q Consensus 136 yg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 212 (668)
+..... ..+...|+.+|.+.|.+++.++.+ .+++++++|||.|..+....
T Consensus 177 ~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------- 229 (267)
T 1sny_A 177 SIQGNT-----------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------------- 229 (267)
T ss_dssp CSTTCC-----------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------
T ss_pred cccCCC-----------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------
Confidence 654321 123457999999999999988766 58999999999998764311
Q ss_pred ceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 213 LPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 213 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
..++..+|++++++.++...
T Consensus 230 ----------~~~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 230 ----------SAPLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp ----------TCSBCHHHHHHHHHHHHHHC
T ss_pred ----------CCCCCHHHHHHHHHHHHHhc
Confidence 02357889999999988754
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-19 Score=173.25 Aligned_cols=222 Identities=15% Similarity=0.089 Sum_probs=157.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|..... .+.+.. .....++.++.+|++|.+.+.++++.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEV-ADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999 78899888853211 111110 11234789999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++.. .+ ..++|++||...+.+..
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------- 174 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNM-------- 174 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCC--------
Confidence 3799999999986532 23345567889999999998877643 23 57999999976653322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
+...|+.+|.+.+.+++.++.+ .++++.+++||.|.++... ......... .........+
T Consensus 175 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~---------~~~~~~~~~~ 237 (271)
T 4iin_A 175 ------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA--NLKDELKAD---------YVKNIPLNRL 237 (271)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------------CGGGCTTCSC
T ss_pred ------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh--hhcHHHHHH---------HHhcCCcCCC
Confidence 2457999999999999998766 4899999999999887542 111111111 1111122357
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 238 ~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 238 GSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred cCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence 79999999999988753 358899998774
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-19 Score=174.79 Aligned_cols=232 Identities=13% Similarity=0.090 Sum_probs=159.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-C
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-S 80 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~ 80 (668)
+++|++|||||+|+||++++++|+++ +++|++.+|..... ....+........+..+.+|++|.+.+.+++++. +
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence 34689999999999999999999999 68899998864211 0111111111345788999999999998888654 7
Q ss_pred CCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
+|++||+||...... ..+++...+++|+.++.++.+++. +.+ ..++|++||...+.+..
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------ 152 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQ------------ 152 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCT------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCC------------
Confidence 999999999765322 233455678999999877766553 333 57999999987764322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHcCCCceeecCCC
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|.+.+.+.+.++.+. ++++..+.||.+.++... .........+...... ....
T Consensus 153 --~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 225 (267)
T 3t4x_A 153 --EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RPTS 225 (267)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CTTC
T ss_pred --cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CCcc
Confidence 24579999999999999988764 689999999998876210 0000011111111000 0011
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
....+.+++|+|++++.++... ..|+.+++.+|...+
T Consensus 226 ~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 226 IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred cccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 2235789999999999888643 358899999887554
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=168.05 Aligned_cols=213 Identities=14% Similarity=0.128 Sum_probs=149.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-CCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-ESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d 82 (668)
+++|+||||||+|+||+++++.|+++ +++|++++|.. .....+ ..+.++ +|+ .+++..+++. .++|
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~--~~~~~~------~~~~~~-~D~--~~~~~~~~~~~~~iD 83 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNE--ELLKRS------GHRYVV-CDL--RKDLDLLFEKVKEVD 83 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHT------CSEEEE-CCT--TTCHHHHHHHSCCCS
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCH--HHHHhh------CCeEEE-eeH--HHHHHHHHHHhcCCC
Confidence 45789999999999999999999999 68899998864 111111 246667 999 3334444432 3899
Q ss_pred EEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHH----HHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLE----ACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
+|||+||..... ...+++...+++|+.++.++.+ .+++.+ .+++|++||...|....
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------- 148 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE-------------- 148 (249)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCC--------------
Confidence 999999975432 1233456788999999776654 444544 68999999988875432
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHH-HHHcCCCceeecCCCceEeceeHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
+...|+.+|...+.+.+.++.+ .++++++++||.+.++.... ....... ......+ ...+++++|
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~p---------~~~~~~~~d 217 (249)
T 1o5i_A 149 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE--LLSEEKKKQVESQIP---------MRRMAKPEE 217 (249)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH--HSCHHHHHHHHTTST---------TSSCBCHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc--cchhhHHHHHHhcCC---------CCCCcCHHH
Confidence 2357999999999999987765 48999999999999885310 0011111 1222111 124789999
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 231 VAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 231 ~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+|++++.++... ..|+.|++.+|..
T Consensus 218 vA~~i~~l~s~~~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 218 IASVVAFLCSEKASYLTGQTIVVDGGLS 245 (249)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 999999888643 2478899987753
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-18 Score=169.36 Aligned_cols=222 Identities=14% Similarity=0.129 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.++.... ..+.+.. .....++.++.+|++|.+.+.+++..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAE-RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 7888888654321 1111111 11235688999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... .+.+++...+++|+.++.++++++... ....++|++||.......
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~------------ 173 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP------------ 173 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC------------
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC------------
Confidence 2799999999975432 234456678999999999999988764 224699999985442211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
..+...|+.+|...+.+.+.++.++ ++++.+++||.|.++..... ..... .....+ ...+..
T Consensus 174 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~----~~~~~~---------~~r~~~ 239 (271)
T 3v2g_A 174 -WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEA----QRERIA---------TGSYGE 239 (271)
T ss_dssp -STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHH----HHHTCT---------TSSCBC
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHH----HHhcCC---------CCCCCC
Confidence 1234579999999999999887664 89999999999999865321 11111 111111 113568
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+|+|++++.++... ..|+.+++.+|.
T Consensus 240 pedvA~~v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 240 PQDIAGLVAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence 999999999888543 357889998764
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4e-19 Score=176.15 Aligned_cols=209 Identities=16% Similarity=0.048 Sum_probs=148.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHH-hCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIR-NYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~-~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++++||||||+|+||++++++|++ + +++|++++|.... ....... ....++.++.+|++|.+.+.+++..
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTR--GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHH--HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHH--HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999 7 6789998885321 1111000 0134688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCC-Cc------
Q 005949 79 ---ESIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDE-DA------ 143 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~-~~------ 143 (668)
.++|+|||+||....... .+++...+++|+.++.++++++...- ...+||++||...+..... .+
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhc
Confidence 279999999997643221 23456789999999999999998642 1249999999777632100 00
Q ss_pred -CCCCCC-------------------CCCCCCCChhHHHHHHHHHHHHHHHHh-------cCCCEEEEeeCceeCCCCCC
Q 005949 144 -VVGNHE-------------------ASQLLPTNPYSATKAGAEMLVMAYGRS-------YGLPVITTRGNNVYGPNQFP 196 (668)
Q Consensus 144 -~~~~~e-------------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~G~~~~~ 196 (668)
....+| .....|...|+.+|.+.|.+++.++.+ .++++++++||.|.++....
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 000011 011234578999999999999887765 48999999999998875421
Q ss_pred CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 197 EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
..+.+.+|+|++++.++..+
T Consensus 238 --------------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 --------------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp --------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred --------------------------cccCChhHhhhhHhhhhcCc
Confidence 12578999999999998744
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=170.02 Aligned_cols=226 Identities=15% Similarity=0.082 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.++.... ..+.+.. .....++.++.+|++|.+.+.++++.
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTK-DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 6888887664321 1111110 11235789999999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... .+.+++...+++|+.++.++++++...- .-.++|++||......
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------- 159 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF------------- 159 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC-------------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC-------------
Confidence 3799999999986532 2344566789999999999999887642 1249999999652111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC----------CChHHHHHHHHHcCCCceeecC
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP----------EKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
...+...|+.+|...+.+.+.++.+ .++++..++||.|.++.... ...............
T Consensus 160 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 232 (270)
T 3is3_A 160 SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS------- 232 (270)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS-------
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC-------
Confidence 1123457999999999999998776 48999999999999875310 001111112111111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
....+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 233 --p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 233 --PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp --TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred --CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 1123568999999999988643 257889998764
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=175.32 Aligned_cols=223 Identities=13% Similarity=0.052 Sum_probs=158.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEc-CCCccCCccccCCC---cCCCCeEEEEccCCCHH--------
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPS---KASSNFKFVKGDIASAD-------- 70 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~-r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~-------- 70 (668)
.+++|+||||||+|+||+++++.|+++ +++|++++ |... .+..+... ....++.++.+|++|.+
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 118 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAA--EANALSATLNARRPNSAITVQADLSNVATAPVSGAD 118 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-----
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHH--HHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccc
Confidence 355689999999999999999999999 68899888 6432 11111111 11346889999999998
Q ss_pred ---------HHHHHhcc-----CCCCEEEEcCccCCccc----c--------------cCChHHHHHHHHHHHHHHHHHH
Q 005949 71 ---------LVNFLLIT-----ESIDTIMHFAAQTHVDN----S--------------FGNSFEFTKNNIYGTHVLLEAC 118 (668)
Q Consensus 71 ---------~~~~~~~~-----~~~d~Vih~a~~~~~~~----~--------------~~~~~~~~~~nv~~~~~l~~~~ 118 (668)
.+.+++.. .++|+|||+||...... . .+++...+++|+.++.++++++
T Consensus 119 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 198 (328)
T 2qhx_A 119 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF 198 (328)
T ss_dssp --CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777642 37999999999754221 1 2344568899999999999877
Q ss_pred HHc---CC------CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEee
Q 005949 119 KVT---GQ------IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRG 186 (668)
Q Consensus 119 ~~~---~~------~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~ 186 (668)
... .. ..++|++||...+.... +...|+.+|...+.+.+.++.++ ++++.+++|
T Consensus 199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~--------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P 264 (328)
T 2qhx_A 199 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP 264 (328)
T ss_dssp HHHHHHSCGGGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred HHHHHhcCCcCCCCCcEEEEECchhhccCCC--------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence 532 11 47999999987654321 24579999999999999887664 899999999
Q ss_pred CceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 187 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
|.|.++. . .. +..........++. ..+...+|+|++++.++... ..|+.+++.+|..
T Consensus 265 G~v~T~~-~--~~-~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 265 GLSVLVD-D--MP-PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324 (328)
T ss_dssp SSBSCCC-C--SC-HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcccCCc-c--cc-HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence 9999886 2 22 33333333222111 02568999999999988642 2578899987754
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=169.53 Aligned_cols=210 Identities=16% Similarity=0.095 Sum_probs=145.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||+++++.|+++ +++|++.+|... .+..+... ....++..+.+|++|.+.+.+++..
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVA--GAKILLGARRQA--RIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999 688999888642 11111111 1134678899999999998887743
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.|+.++.+++.. .+ ..++|++||...+....
T Consensus 78 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-------- 148 (264)
T 3tfo_A 78 TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVP-------- 148 (264)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT--------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCC--------
Confidence 3799999999976432 23345567889999999988877643 23 57999999987764432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+.+.++.+. ++++..++||.|..+.... .. ......... ...+.++.
T Consensus 149 ------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~--~~--------~~~~~~~~~--~~~~~~~~ 210 (264)
T 3tfo_A 149 ------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT--IT--------HEETMAAMD--TYRAIALQ 210 (264)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------------------CCC
T ss_pred ------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc--cc--------chhHHHHHH--hhhccCCC
Confidence 23469999999999999988775 8999999999998764311 00 000000000 01112468
Q ss_pred HHHHHHHHHHHHhcCCC
Q 005949 228 CEDVAEAFECILHKGEV 244 (668)
Q Consensus 228 v~D~a~ai~~~~~~~~~ 244 (668)
.+|+|++++.++..+..
T Consensus 211 pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 211 PADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhcCCcc
Confidence 99999999999987653
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.7e-19 Score=173.44 Aligned_cols=224 Identities=17% Similarity=0.175 Sum_probs=159.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----CC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----ES 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~ 80 (668)
++++||||||+|+||++++++|+++ +++|++++|... .+..+... ...++.++.+|++|.+.+.++++. .+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~--~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAE--KGKALADE-LGNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHHH-hCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4679999999999999999999999 688999988642 11111111 134689999999999998887743 36
Q ss_pred CCEEEEc-CccCCcc---------cccCChHHHHHHHHHHHHHHHHHHHHc---------CCCcEEEEEcCccccCCCCC
Q 005949 81 IDTIMHF-AAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKVT---------GQIRRFIHVSTDEVYGETDE 141 (668)
Q Consensus 81 ~d~Vih~-a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~vyg~~~~ 141 (668)
+|+|||+ |+..... ...+++...+++|+.++.++++++... +.-.++|++||...+....
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 182 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI- 182 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT-
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC-
Confidence 8999999 5443221 122235688999999999999877632 1235999999987764432
Q ss_pred CcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecC
Q 005949 142 DAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 142 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (668)
+...|+.+|.+.+.+.+.++.++ ++++.+++||.|..+... ..............+.
T Consensus 183 -------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~----- 242 (281)
T 3ppi_A 183 -------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME--SVGEEALAKFAANIPF----- 242 (281)
T ss_dssp -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TTCHHHHHHHHHTCCS-----
T ss_pred -------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh--cccHHHHHHHHhcCCC-----
Confidence 24579999999999998877654 899999999999876321 1112222222222221
Q ss_pred CCceEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCccc
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKERR 257 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~s 257 (668)
...+++.+|+|++++.++.... .|+.+++.+|..++
T Consensus 243 ---~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 243 ---PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp ---SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred ---CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 1246799999999999988644 57889999887543
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=171.74 Aligned_cols=222 Identities=13% Similarity=0.102 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCC-CCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYP-EYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~-~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
+++|+||||||+|+||+++++.|+++|+ ..+|++.+|.... ++.+.. .....++.++.+|++|.+++.++++.
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK--LEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH--HHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH--HHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 3568999999999999999999999953 2489988886421 111111 11134688999999999999888854
Q ss_pred -----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|+|||+||.... ....+++...+++|+.|+.++++++. +.+ ..++|++||...+....
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~---- 183 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYP---- 183 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT----
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCC----
Confidence 279999999997541 22334566889999999999998873 333 57999999987654322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC--CCChHHHHHHHHHcCCCceeecCC
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF--PEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
+...|+.+|.+.+.+.+.++.+ .++++.+++||.|..+... ........... ....
T Consensus 184 ----------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~-------- 244 (287)
T 3rku_A 184 ----------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNV-YKDT-------- 244 (287)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHH-HTTS--------
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHh-hccc--------
Confidence 2457999999999999998876 4899999999999987310 00001111111 1111
Q ss_pred CceEeceeHHHHHHHHHHHHhcCCC---CceEEEcCCCc
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGEV---GHVYNVGTKKE 255 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~~---~~~~ni~~~~~ 255 (668)
..+..+|+|++++.++..+.. ++++++.+++.
T Consensus 245 ----~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 245 ----TPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp ----CCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred ----CCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 123889999999999986643 67788876654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-18 Score=169.79 Aligned_cols=226 Identities=14% Similarity=0.068 Sum_probs=158.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++++|..... .+.... .....++.++.+|++|.+.+.+++..
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTES-AEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHH-HHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999 68899888864210 111000 11134688999999999988877642
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 172 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV----------- 172 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC-----------
Confidence 3799999999976432 233455678999999999999998875 2257999999976643321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC-------CC--ChHHHHHHHHHc--CCCceeec
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF-------PE--KLIPKFILLAMR--GLPLPIHG 217 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~-------~~--~~~~~~~~~~~~--~~~~~~~~ 217 (668)
.+...|+.+|...+.+.+.++.+ .++++.+++||.|.++... +. ............ ..
T Consensus 173 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 244 (283)
T 1g0o_A 173 --PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS------ 244 (283)
T ss_dssp --SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC------
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC------
Confidence 12457999999999999988765 4899999999999886320 00 000111111111 11
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
....+.+.+|+|++++.++... ..|+.+++.+|.
T Consensus 245 ---p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 245 ---PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ---CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 1123678999999999988753 357789888764
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.1e-19 Score=172.66 Aligned_cols=225 Identities=13% Similarity=0.042 Sum_probs=148.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC--CCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE--SIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 83 (668)
||+||||||+|+||+++++.|+++ +++|++++|.... .. . . +.+|++|.+++.++++.. ++|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~--~~--------~--~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAE--VI--------A--D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS--EE--------C--C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchh--hc--------c--c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 468999999999999999999999 6889998885421 10 0 1 578999999999988653 6799
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC-----C-------
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN-----H------- 148 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~-----~------- 148 (668)
|||+||.... ...+...+++|+.++.++++++... ...+++|++||...+........... +
T Consensus 66 lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T 1fjh_A 66 LVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI 142 (257)
T ss_dssp EEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence 9999997541 2447789999999999999888531 22579999999988743211100000 0
Q ss_pred --CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 149 --EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 149 --e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
+..+..+...|+.+|.+.+.+++.++.+ .++++++++||.|.++..... ............ + .....
T Consensus 143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~--~-----~~~~~ 214 (257)
T 1fjh_A 143 VEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG-LQDPRYGESIAK--F-----VPPMG 214 (257)
T ss_dssp HHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C-----CCSTT
T ss_pred hhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh-ccchhHHHHHHh--c-----ccccC
Confidence 0011123457999999999999987765 489999999999998754210 000000100000 0 00112
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.+++++|+|++++.++..+ ..|+.+++.+|...
T Consensus 215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence 4679999999999988754 35778998877543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=164.83 Aligned_cols=209 Identities=15% Similarity=0.137 Sum_probs=151.1
Q ss_pred CCCC-CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 1 MATY-TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 1 m~~~-~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
|+.| ++|+||||||+|+||++++++|+++ +++|++++|.... . ......+.+|++|.+.+.++++.
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~--------~~~~~~~~~D~~~~~~v~~~~~~~ 68 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENE--E--------ASASVIVKMTDSFTEQADQVTAEV 68 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCT--T--------SSEEEECCCCSCHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhh--c--------cCCcEEEEcCCCCHHHHHHHHHHH
Confidence 5543 4689999999999999999999999 6889999886421 1 11356788999999998887753
Q ss_pred ------CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ------ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ------~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 142 (241)
T 1dhr_A 69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------ 142 (241)
T ss_dssp HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------
T ss_pred HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC------
Confidence 379999999997542 12233456788999999999999887531 125999999987765322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.+-.+. ........ .
T Consensus 143 --------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~----------~~~~~~~~---------~ 195 (241)
T 1dhr_A 143 --------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------NRKSMPEA---------D 195 (241)
T ss_dssp --------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH----------HHHHSTTS---------C
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc----------ccccCcch---------h
Confidence 24579999999999999987653 5999999999987652 11111111 1
Q ss_pred eEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
...++..+|+|++++.++.... .|+.+.+.++.
T Consensus 196 ~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 196 FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence 1235778999999998886542 46778776544
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=168.84 Aligned_cols=228 Identities=14% Similarity=0.064 Sum_probs=159.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+++++|+||||||+|+||++++++|+++ +++|+++.+.... ....... .....++..+.+|+.|.+.+..++..
T Consensus 3 ~~l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (255)
T 3icc_A 3 SMLKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL 79 (255)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSH-HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CccCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchH-HHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence 4566789999999999999999999999 6788775433211 1111110 11234678899999999988777642
Q ss_pred ----------CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCc
Q 005949 79 ----------ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 79 ----------~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~ 143 (668)
.++|+|||+||...... ..++....+++|+.++.++++++... ....++|++||...+.+..
T Consensus 80 ~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--- 156 (255)
T 3icc_A 80 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--- 156 (255)
T ss_dssp HHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT---
T ss_pred HHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC---
Confidence 24999999999754322 22334567899999999999988753 1135899999987754432
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
....|+.+|.+.+.+.+.++.+. ++++..++||.|..+.......-+.+........+
T Consensus 157 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------- 217 (255)
T 3icc_A 157 -----------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA-------- 217 (255)
T ss_dssp -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST--------
T ss_pred -----------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC--------
Confidence 23569999999999999887653 89999999999998865321111112222222211
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
...+.+++|+++++..++... ..|+.+++.+|..
T Consensus 218 -~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 218 -FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred -cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence 124668999999999888543 3588999988753
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=166.01 Aligned_cols=202 Identities=11% Similarity=0.070 Sum_probs=144.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
|++|+||||||+|+||++++++|+++ +++|++.+|... .++...... ..++.++.+|++|.+++.++++.
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQ--RLQQQELLL-GNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH-GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999 688999998642 122111111 12588999999999998877743
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ..-.++|++||...+.+..
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------ 143 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA------------ 143 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS------------
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC------------
Confidence 379999999997543 2234456678999999999998877432 1124999999976654322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
+...|+.+|.+.+.+.+.++.+. ++++..++||.|-.+.... .. . . ....++..+
T Consensus 144 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~------~~----~---~-------~~~~~~~pe 201 (235)
T 3l6e_A 144 --NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN------TD----H---V-------DPSGFMTPE 201 (235)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------------CBCHH
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc------cC----C---C-------CCcCCCCHH
Confidence 13469999999999999988754 7999999999998764311 00 0 0 111467899
Q ss_pred HHHHHHHHHHhcCCC
Q 005949 230 DVAEAFECILHKGEV 244 (668)
Q Consensus 230 D~a~ai~~~~~~~~~ 244 (668)
|+|++++.++..+..
T Consensus 202 dvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 202 DAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999986644
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=167.46 Aligned_cols=222 Identities=17% Similarity=0.116 Sum_probs=152.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++|++|||||+|+||++++++|+++ +++|++.++... ...+.+.. .....++.++.+|++|.+++.++++.
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKA-AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCS-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3679999999999999999999999 688887744321 11111111 11234688999999999998887743
Q ss_pred -CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++... ..-.++|++||...+....
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------ 170 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------ 170 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT------------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC------------
Confidence 37999999999765322 22334567889999999999877653 1125899999977654322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 229 (668)
+...|+.+|.+.+.+.+.++.++ ++++..+.||.|..+..... ............. ....+...+
T Consensus 171 --~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---------p~~r~~~pe 238 (267)
T 3u5t_A 171 --SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLA---------PLERLGTPQ 238 (267)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSS---------TTCSCBCHH
T ss_pred --CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcC---------CCCCCcCHH
Confidence 23579999999999999988774 79999999999988753110 0011111111211 223467899
Q ss_pred HHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 230 DVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 230 D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
|+|++++.++.... .|+.+++.+|
T Consensus 239 dvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 239 DIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred HHHHHHHHHhCccccCccCCEEEeCCC
Confidence 99999999886543 5778888765
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=169.83 Aligned_cols=229 Identities=13% Similarity=-0.003 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.+|...... ...+.......++.++.+|++|.+.+.++++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 688999988642110 00111101223588999999999998877643
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++... ....++|++||...+.+..
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 154 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP--------- 154 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC---------
Confidence 379999999997543 2233455678999999999999887532 1246899999977654332
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC------C--ChHHHHHHHHHcCCCceeecC
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP------E--KLIPKFILLAMRGLPLPIHGD 218 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~------~--~~~~~~~~~~~~~~~~~~~~~ 218 (668)
....|+.+|...+.+.+.++.++ ++++..++||.|.+|.... . .....+..........
T Consensus 155 -----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (265)
T 3lf2_A 155 -----HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI----- 224 (265)
T ss_dssp -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC-----
T ss_pred -----CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC-----
Confidence 24579999999999999887654 8999999999998763200 0 0111111111111111
Q ss_pred CCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 219 GSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 219 ~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
....+...+|+|++++.++... ..|+.+++.+|..
T Consensus 225 --p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 225 --PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp --TTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred --CcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 1124678999999999988643 2578899987753
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=167.59 Aligned_cols=218 Identities=13% Similarity=0.146 Sum_probs=153.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccC--CCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDI--ASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl--~d~~~~~~~~~~ 78 (668)
+++|+||||||+|+||++++++|+++ +++|++.+|.... +..... .....++.++.+|+ +|.+.+.+++..
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEK--LRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence 45689999999999999999999999 6789999886421 111111 01123678899999 999888777642
Q ss_pred -----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---- 160 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRA---- 160 (252)
T ss_dssp HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCT----
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCC----
Confidence 379999999997431 12233456789999999999998873 333 57999999977654322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.+++ +++..+.||.|..+. ........ ..
T Consensus 161 ----------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~----------~~~~~~~~---------~~ 211 (252)
T 3f1l_A 161 ----------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM----------RASAFPTE---------DP 211 (252)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH----------HHHHCTTC---------CG
T ss_pred ----------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch----------hhhhCCcc---------ch
Confidence 245799999999999999887763 888889999887541 11111111 11
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcccHH
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERRVI 259 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s~~ 259 (668)
..+...+|++.+++.++... ..|+.+++.+|...++.
T Consensus 212 ~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 212 QKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp GGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred hccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 23567899999999888654 35789999988876654
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-18 Score=168.27 Aligned_cols=222 Identities=14% Similarity=0.085 Sum_probs=156.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCC----HHHHHHHh
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIAS----ADLVNFLL 76 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d----~~~~~~~~ 76 (668)
|++|++|||||+|+||+++++.|+++ +++|++++|... .....+... ....++.++.+|++| .+.+.+++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~-~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSA-EAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCH-HHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCch-HHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 56789999999999999999999999 688999888641 111111100 123468899999999 88887776
Q ss_pred cc-----CCCCEEEEcCccCCcc--------------cccCChHHHHHHHHHHHHHHHHHHHHcC---C------CcEEE
Q 005949 77 IT-----ESIDTIMHFAAQTHVD--------------NSFGNSFEFTKNNIYGTHVLLEACKVTG---Q------IRRFI 128 (668)
Q Consensus 77 ~~-----~~~d~Vih~a~~~~~~--------------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~------~~~~v 128 (668)
.. .++|+|||+||..... ...+++...+++|+.++.++++++...- . ..++|
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 42 3799999999975421 2223345688999999999998776432 1 35999
Q ss_pred EEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHH
Q 005949 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFIL 205 (668)
Q Consensus 129 ~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~ 205 (668)
++||...+.+.. +...|+.+|...+.+.+.++.++ ++++.+++||.|.++. . . . +....
T Consensus 178 ~isS~~~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~-~~~~~ 239 (288)
T 2x9g_A 178 NLCDAMVDQPCM--------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G-EEEKD 239 (288)
T ss_dssp EECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C-HHHHH
T ss_pred EEecccccCCCC--------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C-hHHHH
Confidence 999987754322 24579999999999998887653 8999999999999987 2 1 1 22222
Q ss_pred HHHcCCCceeecCCCceEec-eeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 206 LAMRGLPLPIHGDGSNVRSY-LYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~-i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
......+. ..+ ...+|+|++++.++... ..|+.+++.+|..
T Consensus 240 ~~~~~~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 240 KWRRKVPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp HHHHTCTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHhhCCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 22222111 123 68999999999988643 3577888887753
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.4e-18 Score=162.65 Aligned_cols=214 Identities=15% Similarity=0.119 Sum_probs=149.1
Q ss_pred CCC-CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MAT-YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~-~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|+. +++|++|||||+|+||++++++|+++ +++|++++|... .+..+... ....++.++.+|++|.+.+.+++.
T Consensus 1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~ 76 (247)
T 2jah_A 1 MPSALQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVE--KLRALGDELTAAGAKVHVLELDVADRQGVDAAVA 76 (247)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 543 66789999999999999999999999 688999888632 11111110 113468899999999999887774
Q ss_pred c-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCC
Q 005949 78 T-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
. .++|+|||+||..... ...+++...+++|+.++.++++++... .. .++|++||...+.+..
T Consensus 77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 150 (247)
T 2jah_A 77 STVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVR----- 150 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCT-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCC-----
Confidence 2 3799999999975422 223345678899999999999887532 12 6999999987654321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
+...|+.+|...+.+.+.++.+ .|+++.+++||.+.++....... ......... . + + +
T Consensus 151 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~---~--~--~--~ 211 (247)
T 2jah_A 151 ---------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQ---R--I--S--Q 211 (247)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHHH---H--T--T--T
T ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHHh---c--c--c--c
Confidence 2457999999999999887754 48999999999999875321110 111111100 0 0 0 1
Q ss_pred EeceeHHHHHHHHHHHHhcCC
Q 005949 223 RSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..+++.+|+|++++.++..+.
T Consensus 212 ~~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 212 IRKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp SCCBCHHHHHHHHHHHHHSCT
T ss_pred cCCCCHHHHHHHHHHHhCCCc
Confidence 114789999999999987653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-18 Score=168.05 Aligned_cols=224 Identities=17% Similarity=0.152 Sum_probs=152.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.+++|++|||||+|+||+++++.|+++ +++|++++|... .+..+... ....++.++.+|++|.+.+.+++..
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNRE--ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 688998888632 11111110 1134688999999999988777642
Q ss_pred ---CCCCEEEEcCccC-Cc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQT-HV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.. .. ....+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 152 (262)
T 1zem_A 80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP------- 152 (262)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-------
T ss_pred HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-------
Confidence 3799999999975 21 1233445678899999999999877642 1257999999987654432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-------------CChHHH-HHHHHHcC
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-------------EKLIPK-FILLAMRG 210 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-------------~~~~~~-~~~~~~~~ 210 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.+..+.... ...-+. ........
T Consensus 153 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (262)
T 1zem_A 153 -------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS 225 (262)
T ss_dssp -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc
Confidence 2346999999999999887754 48999999999987653200 000000 11111111
Q ss_pred CCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 211 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
.+ ...+...+|+|++++.++... ..|+.+.+.+|
T Consensus 226 ~p---------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 226 VP---------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp ST---------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CC---------CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 11 113567889999999888643 24667777643
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.5e-19 Score=171.49 Aligned_cols=227 Identities=12% Similarity=0.081 Sum_probs=152.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++++|.... ..++.+... ....++.++.+|++|.+++.++++.
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 7889888775321 111111111 1134688999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~---------- 156 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG---------- 156 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC----------
Confidence 3799999999975432 233445678899999999999988763 1246899999977654322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
+...|+.+|.+.+.+.+.++.++ ++++..+.||.|..+...... ................+..
T Consensus 157 ----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~~~~~~r~~~ 222 (262)
T 3ksu_A 157 ----FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE----------TKESTAFHKSQAMGNQLTK 222 (262)
T ss_dssp ----CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------------CCCCSCC
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC----------chHHHHHHHhcCcccCCCC
Confidence 23469999999999999988765 899999999998765311000 0000000111112234678
Q ss_pred HHHHHHHHHHHHhcC--CCCceEEEcCCCcc
Q 005949 228 CEDVAEAFECILHKG--EVGHVYNVGTKKER 256 (668)
Q Consensus 228 v~D~a~ai~~~~~~~--~~~~~~ni~~~~~~ 256 (668)
.+|+|++++.++... ..|+.+++.+|...
T Consensus 223 pedvA~~v~~L~s~~~~itG~~i~vdGg~~~ 253 (262)
T 3ksu_A 223 IEDIAPIIKFLTTDGWWINGQTIFANGGYTT 253 (262)
T ss_dssp GGGTHHHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHHcCCCCCccCCEEEECCCccC
Confidence 899999999888752 24788999877643
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-19 Score=177.97 Aligned_cols=208 Identities=13% Similarity=0.022 Sum_probs=154.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|.+++.++++.+ ++|
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 106 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999854 24568999999998888776 789
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc-----C-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||...... ......+....+++|+.++.++++++... + .+++++||...+.+
T Consensus 107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------- 170 (302)
T 1w6u_A 107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------------- 170 (302)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC----------------
Confidence 9999999652101 12334556778899999999999888542 2 37788888765521
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHH---------HHhhcccceeecCCCcccHhhH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFI---------TKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
.++...|+.||...|.+++.+... .++++.+++|+.++++..+- ..+.... ....+.+++|+
T Consensus 171 --~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~dv 244 (302)
T 1w6u_A 171 --SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI----PCGRLGTVEEL 244 (302)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC----TTSSCBCHHHH
T ss_pred --CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC----CcCCCCCHHHH
Confidence 123468999999999999887543 68999999999998873110 1111111 11357789999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINP 613 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~ 613 (668)
|++++.++... .+.+|++.++..+++.++++.+.+..|.
T Consensus 245 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 245 ANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred HHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 99999998653 3569999999999999988888777654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-18 Score=163.95 Aligned_cols=201 Identities=19% Similarity=0.168 Sum_probs=145.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+|+||||||+|+||++++++|+++ +++|++.+|.... +..... .....++.++.+|++|.+.+.++++.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD--GYALALGARSVDR--LEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLER 77 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHh
Confidence 579999999999999999999999 6889998886421 111110 01235789999999999999888743
Q ss_pred -CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|+|||+||...... ..+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 78 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 146 (235)
T 3l77_A 78 FGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP----------- 146 (235)
T ss_dssp HSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT-----------
T ss_pred cCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC-----------
Confidence 27999999999765322 34456678999999999999887542 1125778877765433221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
....|+.+|.+.+.+.+.+..+ .++++.+++||.|-.+...... . ......++..+|
T Consensus 147 ---~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~-----------~--------~~~~~~~~~p~d 204 (235)
T 3l77_A 147 ---YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP-----------G--------KPKEKGYLKPDE 204 (235)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS-----------C--------CCGGGTCBCHHH
T ss_pred ---CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC-----------C--------cccccCCCCHHH
Confidence 1346999999999999987544 3899999999999876432100 0 001124678999
Q ss_pred HHHHHHHHHhcCC
Q 005949 231 VAEAFECILHKGE 243 (668)
Q Consensus 231 ~a~ai~~~~~~~~ 243 (668)
+|++++.++..+.
T Consensus 205 va~~v~~l~~~~~ 217 (235)
T 3l77_A 205 IAEAVRCLLKLPK 217 (235)
T ss_dssp HHHHHHHHHTSCT
T ss_pred HHHHHHHHHcCCC
Confidence 9999999998765
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=167.04 Aligned_cols=193 Identities=13% Similarity=0.065 Sum_probs=142.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~ 442 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.+ ++|+|||+||..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~ 87 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVA 87 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccC
Confidence 579999999999999999999999865 23467999999999998865 589999999976
Q ss_pred CCC-CccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 443 GRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 443 ~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
... ..+...++....+++|+.++.++++++... + .++|++||...+. +.++.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------~~~~~~~Y 149 (244)
T 3d3w_A 88 LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------------AVTNHSVY 149 (244)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------CCTTBHHH
T ss_pred CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc------------------CCCCCchH
Confidence 210 111223455678899999999999988653 4 3678888876542 11234689
Q ss_pred hhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 516 SKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
+.||...|.+++.+... .++++.+++|+.++++..- ...+... .....+.+++|+|++++.++..
T Consensus 150 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~~~l~~~ 225 (244)
T 3d3w_A 150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR----IPLGKFAEVEHVVNAILFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHT----CTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhh----CCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999886432 5799999999999987421 1111111 1123688999999999999975
Q ss_pred c----CCceeeecCCCcc
Q 005949 585 N----LRGIWNFTNPGVV 598 (668)
Q Consensus 585 ~----~~g~~ni~~~~~~ 598 (668)
. .+.+|++.++...
T Consensus 226 ~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 226 RSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred cccCCCCCEEEECCCccC
Confidence 3 3568999887543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.9e-17 Score=151.76 Aligned_cols=220 Identities=15% Similarity=0.122 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 82 (668)
+++|++|||||++.||+++++.|+++ +.+|++.+|... .++ .....++..+.+|++|++.+++++++. ++|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~--~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 80 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDAD--GVH----APRHPRIRREELDITDSQRLQRLFEALPRLD 80 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTT--STT----SCCCTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHh----hhhcCCeEEEEecCCCHHHHHHHHHhcCCCC
Confidence 36899999999999999999999999 788999998642 111 122457899999999999999988654 699
Q ss_pred EEEEcCccCCc--ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 83 TIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 83 ~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
++||+||.... ..+.+++...+++|+.++..+.+++..+ .+-.++|.+||...+.... ....
T Consensus 81 iLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~--------------~~~~ 146 (242)
T 4b79_A 81 VLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA--------------DRPA 146 (242)
T ss_dssp EEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS--------------SCHH
T ss_pred EEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC--------------CCHH
Confidence 99999997542 2233456678999999999888766432 0126999999976643322 1346
Q ss_pred hHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 159 YSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
|+.+|.....+.+..+.++ |+++..+-||.|-.|.......-+...+...+.-++. -+...+|+|.++
T Consensus 147 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v 217 (242)
T 4b79_A 147 YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVASAA 217 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHH
Confidence 9999999999999887653 8999999999998875422111122333333333221 245789999999
Q ss_pred HHHHhcC---CCCceEEEcCCC
Q 005949 236 ECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 236 ~~~~~~~---~~~~~~ni~~~~ 254 (668)
+.++... -.|+.+.+.+|.
T Consensus 218 ~fLaSd~a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 218 AFLCGPGASFVTGAVLAVDGGY 239 (242)
T ss_dssp HHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHhCchhcCccCceEEECccH
Confidence 9888543 257788887663
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=4e-18 Score=166.37 Aligned_cols=196 Identities=13% Similarity=0.127 Sum_probs=145.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~ 443 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|||+||...
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 108 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL 108 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
Confidence 479999999999999999999999865 34678999999998888765 7899999999762
Q ss_pred CCC-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 444 RPN-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 444 ~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
... .+...++....+++|+.|+.++++++ ++.+. ++|++||+.++.. .+..+...|+.
T Consensus 109 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~~~~~~~Y~~ 172 (260)
T 3un1_A 109 AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP----------------MVGMPSALASL 172 (260)
T ss_dssp CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC----------------BTTCCCHHHHH
T ss_pred CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC----------------CCCCccHHHHH
Confidence 111 12234456678889999999999988 34444 7788888654421 12234478999
Q ss_pred hHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh---HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--CCce
Q 005949 518 TKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN---FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGI 589 (668)
Q Consensus 518 sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~ 589 (668)
||...+.+.+.+... .++++..++|+.+++|.. ....+.... ....+..++|+|++++.+.+.. .+.+
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~----p~~r~~~~~dva~av~~L~~~~~itG~~ 248 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLH----PVGRMGEIRDVVDAVLYLEHAGFITGEI 248 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTS----TTSSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccC----CCCCCcCHHHHHHHHHHhcccCCCCCcE
Confidence 999999998886433 489999999999998852 222222111 1235677999999999996544 5679
Q ss_pred eeecCCCccC
Q 005949 590 WNFTNPGVVS 599 (668)
Q Consensus 590 ~ni~~~~~~s 599 (668)
|++.+|...+
T Consensus 249 i~vdGG~~~~ 258 (260)
T 3un1_A 249 LHVDGGQNAG 258 (260)
T ss_dssp EEESTTGGGC
T ss_pred EEECCCeecc
Confidence 9999886543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=169.89 Aligned_cols=198 Identities=18% Similarity=0.128 Sum_probs=146.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+|||
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 88 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVN 88 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999865 34678999999988888755 7899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+||...... .+...++....+++|+.|+.++++++... +.++|++||...+.+ .+
T Consensus 89 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~ 150 (259)
T 4e6p_A 89 NAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG------------------EA 150 (259)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------------------CT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC------------------CC
Confidence 999762111 12234455677889999999999998653 347888888765521 12
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H---HHHhhcc---cc-----eeecCCCcccHhhH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F---ITKISRY---NK-----VVNIPNSMTVLDEL 574 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~---~~~~~~~---~~-----~~~~~~~~~~v~D~ 574 (668)
..+.|+.||...|.+.+.+.. ..++++..++|+.+++|.. + ....... .. .......+.+.+|+
T Consensus 151 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv 230 (259)
T 4e6p_A 151 LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDL 230 (259)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHH
Confidence 346899999999999988753 3489999999999999852 1 1111110 00 00112368899999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
|++++.++... .+++|++.+|..+|
T Consensus 231 a~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 231 TGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp HHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 99999988643 46799999987654
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-18 Score=169.69 Aligned_cols=222 Identities=14% Similarity=0.063 Sum_probs=155.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||+|+||+++++.|+++ +++|++.+|.... ...... .....++..+.+|++|.+.+.+++..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGS--TAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTT--THHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHH--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999 6789999885421 111111 11245789999999999888777642
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+||..... ...+++...+++|+.|+.++++++. +.+ ..++|++||...+...
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~---------- 175 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK---------- 175 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----------
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC----------
Confidence 3799999999975432 2334456788999999999998873 333 5799999998776522
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCC-hHHHHHHHHHcCC-CceeecCCCceEe
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK-LIPKFILLAMRGL-PLPIHGDGSNVRS 224 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 224 (668)
.+...|+.+|.+.+.+.+.++.++ ++++.+++||.|..+...... ..+.......... ++ ..
T Consensus 176 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~---------~r 242 (275)
T 4imr_A 176 ----SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM---------GR 242 (275)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT---------CS
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc---------CC
Confidence 123469999999999999987764 899999999999876321000 0001111111110 11 12
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
+...+|+|++++.++... ..|+.+++.+|
T Consensus 243 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 243 AGRPEEMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred CcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 457889999999988653 25788888865
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.5e-18 Score=165.38 Aligned_cols=225 Identities=13% Similarity=0.040 Sum_probs=161.0
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCCccC---CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLDYCS---NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
+++++||||||+ |+||++++++|+++ +++|+++++..... ....+. .....++.++.+|++|.+.+.++++.
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELE-KTYGIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHH-HHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHH-HhcCCceeEEecCCCCHHHHHHHHHH
Confidence 467899999999 99999999999999 78898888764321 011110 11135788999999999998887743
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|+|||+||..... .+.+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----- 168 (267)
T 3gdg_A 95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANF----- 168 (267)
T ss_dssp HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCS-----
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCC-----
Confidence 3799999999976532 233455678999999999999887 3333 57999999977654321
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
..+...|+.+|.+.+.+++.++.+++ +++..+.||.|..+.... ............. ...
T Consensus 169 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~---------~~~ 230 (267)
T 3gdg_A 169 -------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF--VPKETQQLWHSMI---------PMG 230 (267)
T ss_dssp -------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG--SCHHHHHHHHTTS---------TTS
T ss_pred -------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh--CCHHHHHHHHhcC---------CCC
Confidence 11245799999999999999887753 788999999998775421 1122222222221 223
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+.+.+|++++++.++... ..|+.+++.+|..
T Consensus 231 r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 231 RDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp SCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence 4678999999999888653 2478999988754
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9.2e-18 Score=166.88 Aligned_cols=225 Identities=14% Similarity=0.068 Sum_probs=156.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEc-CCCccCCccccCCC---cCCCCeEEEEccCCCHH------
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPS---KASSNFKFVKGDIASAD------ 70 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~-r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~------ 70 (668)
|..+++|++|||||+|+||+++++.|+++ +++|++++ |... .+...... ....++.++.+|++|.+
T Consensus 4 m~~l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~ 79 (291)
T 1e7w_A 4 MTAPTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAA--EANALSATLNARRPNSAITVQADLSNVATAPVSG 79 (291)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH--HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHH--HHHHHHHHHhhhcCCeeEEEEeecCCcccccccc
Confidence 55567789999999999999999999999 68899988 7532 11111110 11346889999999998
Q ss_pred -----------HHHHHhcc-----CCCCEEEEcCccCCcc----cc--------------cCChHHHHHHHHHHHHHHHH
Q 005949 71 -----------LVNFLLIT-----ESIDTIMHFAAQTHVD----NS--------------FGNSFEFTKNNIYGTHVLLE 116 (668)
Q Consensus 71 -----------~~~~~~~~-----~~~d~Vih~a~~~~~~----~~--------------~~~~~~~~~~nv~~~~~l~~ 116 (668)
.+.+++.. .++|+|||+||..... .. .+++...+++|+.++.++++
T Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 159 (291)
T 1e7w_A 80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK 159 (291)
T ss_dssp ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence 87777642 3799999999975421 11 33445788999999999998
Q ss_pred HHHHc---CC------CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEE
Q 005949 117 ACKVT---GQ------IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITT 184 (668)
Q Consensus 117 ~~~~~---~~------~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~il 184 (668)
++... .. ..++|++||...+.+.. +...|+.+|...+.+.+.++.+ +++++..+
T Consensus 160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v 225 (291)
T 1e7w_A 160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGV 225 (291)
T ss_dssp HHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEEechhhcCCCC--------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 77632 11 47999999987654322 2457999999999999988765 38999999
Q ss_pred eeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 185 RGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 185 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+||.|..+. . .. +..........++. ..+...+|+|++++.++... ..|+.+++.+|..
T Consensus 226 ~PG~v~T~~-~-~~--~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 287 (291)
T 1e7w_A 226 GPGLSVLVD-D-MP--PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287 (291)
T ss_dssp EESSBCCGG-G-SC--HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred eeCCccCCc-c-CC--HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence 999998775 2 11 22323322221110 02568999999999988643 2577888887754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-18 Score=168.69 Aligned_cols=215 Identities=15% Similarity=0.124 Sum_probs=147.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC---cCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS---KASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
++|++|||||+|+||++++++|+++ +++|++.+|.... +...... .....+.++.+|++|.+++.++++.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDV--LDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999 6889999886421 1111100 0122358899999999998887743
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc----C-CCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT----G-QIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|+|||+||.... +...+++...+++|+.++.++.+++... + ...++|++||...+...
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------- 180 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR------- 180 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC-------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC-------
Confidence 379999999997532 1233455678999999988888766532 1 13699999997765332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
.+...|+.+|.+.+.+.+.++.+ +++++.+++||.|..+... ..... ...........
T Consensus 181 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----------~~~~~--~~~~~~~~~~~ 241 (281)
T 4dry_A 181 -------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA----------RMSTG--VLQANGEVAAE 241 (281)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------------CE--EECTTSCEEEC
T ss_pred -------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh----------hhcch--hhhhhhccccc
Confidence 23457999999999999988765 4899999999999876431 00000 00000001122
Q ss_pred eceeHHHHHHHHHHHHhcCCCCceEE
Q 005949 224 SYLYCEDVAEAFECILHKGEVGHVYN 249 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~~~~~~n 249 (668)
.++..+|+|++++.++..+....+.+
T Consensus 242 ~~~~pedvA~~v~fL~s~~~~~~i~~ 267 (281)
T 4dry_A 242 PTIPIEHIAEAVVYMASLPLSANVLT 267 (281)
T ss_dssp CCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCccCcccc
Confidence 37789999999999999876544433
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-17 Score=159.79 Aligned_cols=216 Identities=16% Similarity=0.084 Sum_probs=148.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----CCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----ESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 81 (668)
|++|||||+|+||+++++.|+++ +++|++.+|... .+..+.... ..++.++.+|++|.+++.+++.. .++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQE--RLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999 688999888532 111111111 23688999999999999888753 279
Q ss_pred CEEEEcCccCC-----cccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 82 DTIMHFAAQTH-----VDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 82 d~Vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
|+|||+||... ...+.+++...+++|+.++.++++++. +.+ ..++|++||...+.+..
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------------ 142 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA------------ 142 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCC------------
Confidence 99999999752 122334566789999999999888775 333 57999999987654321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeC-CCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYG-PNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.|.| +.... ..... ... . . ... .....+..
T Consensus 143 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~-~~~~~-~~~-~--~--~~~----~~~~~~~p 209 (248)
T 3asu_A 143 --GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV-RFKGD-DGK-A--E--KTY----QNTVALTP 209 (248)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---------------------------------CCBCH
T ss_pred --CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh-cccCc-hHH-H--H--HHH----hccCCCCH
Confidence 24579999999999999987653 89999999999994 53210 00000 000 0 0 000 01124689
Q ss_pred HHHHHHHHHHHhcCC--CCceEEEcCC
Q 005949 229 EDVAEAFECILHKGE--VGHVYNVGTK 253 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~--~~~~~ni~~~ 253 (668)
+|+|++++.++..+. .++.+.+...
T Consensus 210 ~dvA~~v~~l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 210 EDVSEAVWWVSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp HHHHHHHHHHHHSCTTCCCCEEEECCT
T ss_pred HHHHHHHHHHhcCCccceeeEEEEccc
Confidence 999999999987643 3555665543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-18 Score=166.87 Aligned_cols=209 Identities=20% Similarity=0.218 Sum_probs=133.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHH---HHHhcc-C
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLV---NFLLIT-E 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~~~-~ 79 (668)
+++|+||||||+|+||++++++|++ +..|++++|... ....+.. ..++.++.+|+.+.+.. .+.+.. .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~--~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPE--HLAALAE---IEGVEPIESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHH--HHHHHHT---STTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHH--HHHHHHh---hcCCcceecccchHHHHHHHHHHHHhcC
Confidence 4678999999999999999999976 467888888542 1111111 24688999999887552 222222 3
Q ss_pred CCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||...... ..+++...+++|+.++.++.+++. +.+ .++|++||...+.+..
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~----------- 141 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHP----------- 141 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC--------------------
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCC-----------
Confidence 7999999999765322 233456788999999888877664 323 6899999987765432
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
+...|+.+|.+.+.+++.++.+ .++++.+++||.|.++... ... .. .+ .......++++
T Consensus 142 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--~~~----~~--~~-------~~~~~~~~~~p 203 (245)
T 3e9n_A 142 ---GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ--GLM----DS--QG-------TNFRPEIYIEP 203 (245)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCGGGSCH
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh--hhh----hh--hh-------cccccccCCCH
Confidence 2457999999999999998765 4899999999999987431 111 00 00 00112347899
Q ss_pred HHHHHHHHHHHhcCCCCceEEEc
Q 005949 229 EDVAEAFECILHKGEVGHVYNVG 251 (668)
Q Consensus 229 ~D~a~ai~~~~~~~~~~~~~ni~ 251 (668)
+|+|++++.+++.+..+.+||+.
T Consensus 204 ~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 204 KEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp HHHHHHHHHHHTSCTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCccceeeeE
Confidence 99999999999988877888876
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-18 Score=170.00 Aligned_cols=210 Identities=13% Similarity=0.102 Sum_probs=158.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.+ +
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGR 91 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999854 23557999999988888765 7
Q ss_pred CCEEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 432 ~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
+|+|||+||.... +..+...++....+++|+.|+.++++++... +.++|++||...+.+
T Consensus 92 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 157 (281)
T 3svt_A 92 LHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-------------- 157 (281)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC--------------
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC--------------
Confidence 8999999997311 1122234455678899999999999988653 237888888776521
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhh
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDE 573 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D 573 (668)
.++.+.|+.||...|.+++.+.. ..++++..++|+.++.+..- ...+.... ....+.+.+|
T Consensus 158 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----p~~r~~~~~d 229 (281)
T 3svt_A 158 ----HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCT----PLPRQGEVED 229 (281)
T ss_dssp ----CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHC----SSSSCBCHHH
T ss_pred ----CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcC----CCCCCCCHHH
Confidence 12346899999999999988643 34699999999999987521 11111111 1124667999
Q ss_pred HHHHHHHHHhcc----CCceeeecCCCccC-HHHHHHHHHhhcCCCC
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPGVVS-HNEILEMYKKYINPEF 615 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~~~s-~~e~~~~i~~~~g~~~ 615 (668)
+|++++.++... .+.+|++.+|...+ ..++.+.+.+.+|.+.
T Consensus 230 va~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 230 VANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred HHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 999999998753 46799999998887 7888888888888653
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.3e-18 Score=160.98 Aligned_cols=201 Identities=15% Similarity=0.090 Sum_probs=142.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC--CCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE--SIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d~ 83 (668)
||+||||||+|+||++++++|+++ +++|++++|... .++.+.... ..++.++.+|+.|.+.+.++++.. ..|+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSES--KLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHH--HHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 468999999999999999999999 677988888642 121111111 346889999999999999988542 3599
Q ss_pred EEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 84 Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 157 (668)
|||+||..... ...+++...+++|+.++.++++++...- ...++|++||...+.+.. +..
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~~ 141 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA--------------QES 141 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT--------------TCH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC--------------CCc
Confidence 99999975432 2334456788999999999998876531 123899999987764432 245
Q ss_pred hhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
.|+.+|.+.+.+.+.++.++ ++++..++||.|..+.... . . ... ....+++.+|+|++
T Consensus 142 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~----~--~~~-------~~~~~~~~~dvA~~ 202 (230)
T 3guy_A 142 TYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET------S----G--KSL-------DTSSFMSAEDAALM 202 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------------------------CCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh------c----C--CCC-------CcccCCCHHHHHHH
Confidence 79999999999999988765 7999999999988763210 0 0 001 13357899999999
Q ss_pred HHHHHhcCCC
Q 005949 235 FECILHKGEV 244 (668)
Q Consensus 235 i~~~~~~~~~ 244 (668)
++.++..+..
T Consensus 203 i~~l~~~~~~ 212 (230)
T 3guy_A 203 IHGALANIGN 212 (230)
T ss_dssp HHHHCCEETT
T ss_pred HHHHHhCcCC
Confidence 9998876543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-18 Score=163.22 Aligned_cols=205 Identities=18% Similarity=0.177 Sum_probs=144.8
Q ss_pred CC-CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----Cc-CCCCeEEEEccCCCHHHHHH
Q 005949 1 MA-TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----SK-ASSNFKFVKGDIASADLVNF 74 (668)
Q Consensus 1 m~-~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~Dl~d~~~~~~ 74 (668)
|+ .++++++|||||+|+||++++++|+++ +++|++++|.... ++.... .. ...++.++.+|++|.+.+.+
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 76 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQN--LEKVHDEIMRSNKHVQEPIVLPLDITDCTKADT 76 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHH--HHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHHhccccCcceEEeccCCCHHHHHH
Confidence 54 346789999999999999999999999 6789999886421 111111 00 12568899999999999887
Q ss_pred Hhcc-----CCCCEEEEcCccCCcc---cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCC
Q 005949 75 LLIT-----ESIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 75 ~~~~-----~~~d~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~ 142 (668)
++.. .++|+|||+||..... ...+++...+++|+.++.++++++. +.+ ..++|++||...+.+.
T Consensus 77 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~--- 152 (250)
T 3nyw_A 77 EIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGF--- 152 (250)
T ss_dssp HHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC----------
T ss_pred HHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCC---
Confidence 7743 3799999999975422 2334456788999999999998873 333 5799999997654321
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
.+...|+.+|.+.+.+.+.++.++ ++++..++||.|..+. .... ....
T Consensus 153 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~----------~~~~--~~~~------ 203 (250)
T 3nyw_A 153 -----------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM----------AKKA--GTPF------ 203 (250)
T ss_dssp -----------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH----------HHHT--TCCS------
T ss_pred -----------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch----------hhhc--CCCc------
Confidence 124579999999999999887664 8999999999987642 1111 1111
Q ss_pred CceEeceeHHHHHHHHHHHHhcCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
....+++.+|++++++.++..+.
T Consensus 204 -~~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 204 -KDEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp -CGGGSBCHHHHHHHHHHHHTSCT
T ss_pred -ccccCCCHHHHHHHHHHHHcCCC
Confidence 12247899999999999998654
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=165.61 Aligned_cols=196 Identities=14% Similarity=0.107 Sum_probs=144.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc------------ccccccCChhHHHHHhhhc----CCCEEEEcccccCCCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------YGKGRLEDCSSLIADVQSV----KPTHVFNAAGVTGRPN 446 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------~~~~D~~d~~~~~~~l~~~----~~d~Vih~a~~~~~~~ 446 (668)
+++|+||||+|+||+++++.|+++|++|. ++.+|++|++++.++++.+ ++|+|||+||......
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~ 81 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEK 81 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCccc
Confidence 36899999999999999999999999763 4568999999998888754 6799999999762111
Q ss_pred cc-cccc----ccccceehhhhhhHHHHHHHHHc----C----C---cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 447 VD-WCES----HKTDTIRTNVAGTLTLADVCRDH----G----I---LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 447 ~~-~~~~----~~~~~~~~Nv~~~~~ll~~~~~~----~----~---~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
.. .... +....+++|+.++.++++++... + . ++|++||...+.+ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------------~~ 143 (242)
T 1uay_A 82 ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------------------QI 143 (242)
T ss_dssp SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------------------CT
T ss_pred ccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC------------------CC
Confidence 11 1111 45677889999999999999764 1 1 6888888776632 12
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
+.+.|+.||...|.+++.+.. ..++++.+++|+.++++.. +...+.... .....+.+.+|+|++++.+
T Consensus 144 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l 220 (242)
T 1uay_A 144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQV---PFPPRLGRPEEYAALVLHI 220 (242)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTC---CSSCSCCCHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhC---CCcccCCCHHHHHHHHHHH
Confidence 346899999999998877643 2489999999999999851 111222111 1124577899999999999
Q ss_pred Hhcc--CCceeeecCCCccC
Q 005949 582 AKRN--LRGIWNFTNPGVVS 599 (668)
Q Consensus 582 ~~~~--~~g~~ni~~~~~~s 599 (668)
+... .+..|++.++..++
T Consensus 221 ~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 221 LENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp HHCTTCCSCEEEESTTCCCC
T ss_pred hcCCCCCCcEEEEcCCeecC
Confidence 9864 46689999886554
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=162.17 Aligned_cols=219 Identities=12% Similarity=0.063 Sum_probs=146.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
|+ |++|||||+|+||+++++.|+++ +++|++++|... .+..+.... ...++.++.+|++|.+.+.+++..
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEA--GWSLVLTGRREE--RLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 44 79999999999999999999999 688999988632 111111110 013688999999999999888754
Q ss_pred -CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCc-EEEEEcCccccCCCCCCcCCCC
Q 005949 79 -ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIR-RFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~-~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|+|||+||.... ....+++...+++|+.++.++.+++. +.+ .. ++|++||...+....
T Consensus 95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~------- 166 (272)
T 2nwq_A 95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYP------- 166 (272)
T ss_dssp GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCT-------
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCC-------
Confidence 268999999997532 12234456789999999888776654 334 46 999999987754321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|.++.... .... . ......... ...
T Consensus 167 -------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~--~~~~---~--~~~~~~~~~----~~~ 228 (272)
T 2nwq_A 167 -------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV--RFGG---D--QARYDKTYA----GAH 228 (272)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-------------------------------CCC
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc--cccc---c--hHHHHHhhc----cCC
Confidence 2357999999999999998765 37999999999999875311 0000 0 000000000 012
Q ss_pred ceeHHHHHHHHHHHHhcCC--CCceEEEcCC
Q 005949 225 YLYCEDVAEAFECILHKGE--VGHVYNVGTK 253 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~ 253 (668)
++..+|+|++++.++..+. .++.+.+.++
T Consensus 229 ~~~pedvA~~v~~l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 229 PIQPEDIAETIFWIMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp CBCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred CCCHHHHHHHHHHHhCCCccCccceEEEeec
Confidence 4689999999999987643 2344555433
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-18 Score=164.23 Aligned_cols=182 Identities=9% Similarity=0.053 Sum_probs=124.3
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcC-Ccc------------------cccccccCChhHHHHHhhhcCCCEEEEccccc
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEG-IPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g-~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
+||+|+||||+|+||+++++.|+++| ++| .++.+|++|++++.++++++ |+|||+|+..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~vv~~a~~~ 99 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQ--DIVYANLTGE 99 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTC--SEEEEECCST
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCC--CEEEEcCCCC
Confidence 35689999999999999999999999 654 45678999999999999976 9999999843
Q ss_pred CCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHH
Q 005949 443 GRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAM 521 (668)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~ 521 (668)
.. ...+.+++++|++.++ ++|++||..+|+.....+ . ...+..+. .+...|..
T Consensus 100 ---~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~----~-~~~~~~~~----~~~~~~~~ 153 (236)
T 3qvo_A 100 ---DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKF----V-EWNNAVIG----EPLKPFRR 153 (236)
T ss_dssp ---TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC---------------------C----GGGHHHHH
T ss_pred ---ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCccc----c-cchhhccc----chHHHHHH
Confidence 11 1357789999999987 688889989987644321 0 11222222 23444555
Q ss_pred HHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc---CCceeeecCCCc
Q 005949 522 VEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN---LRGIWNFTNPGV 597 (668)
Q Consensus 522 ~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~---~~g~~ni~~~~~ 597 (668)
+|+.+.. .+++++++||+.++++..- ..............+++.+|+|++++.++.++ .+++|++++++.
T Consensus 154 ~~~~l~~----~gi~~~~vrPg~i~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 154 AADAIEA----SGLEYTILRPAWLTDEDII--DYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp HHHHHHT----SCSEEEEEEECEEECCSCC--CCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred HHHHHHH----CCCCEEEEeCCcccCCCCc--ceEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 6666643 5899999999988876321 00000011112346889999999999999865 567999999754
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.5e-19 Score=165.22 Aligned_cols=180 Identities=13% Similarity=0.061 Sum_probs=133.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhh-cCCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQS-VKPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~-~~~d~Vih~a~~~~ 443 (668)
|+|+||||+|+||++++++|+++ +| .++.+|++|++++.++++. -++|+|||+||...
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG 78 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 47999999999999999999987 43 3466899999999988883 14599999999762
Q ss_pred CCC-ccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHH
Q 005949 444 RPN-VDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAM 521 (668)
Q Consensus 444 ~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~ 521 (668)
... .+....+....+++|+.++.++++++++.+. +++++||..+|.. .++.+.|+.+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~------------------~~~~~~Y~~sK~a 140 (207)
T 2yut_A 79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ------------------VPGFAAYAAAKGA 140 (207)
T ss_dssp CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS------------------STTBHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC------------------CCCcchHHHHHHH
Confidence 100 1223445667889999999999999976654 7888888876621 1334789999999
Q ss_pred HHHHHHhccCe---eEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccC-Cceee
Q 005949 522 VEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL-RGIWN 591 (668)
Q Consensus 522 ~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~-~g~~n 591 (668)
.|.+++.+... .++++.++||+.++++.. .+.. .....+++++|+|++++.+++++. +.++|
T Consensus 141 ~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~------~~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~~~~ 206 (207)
T 2yut_A 141 LEAYLEAARKELLREGVHLVLVRLPAVATGLW------APLG--GPPKGALSPEEAARKVLEGLFREPVPALLE 206 (207)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG------GGGT--SCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred HHHHHHHHHHHHhhhCCEEEEEecCcccCCCc------cccC--CCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence 99999887543 589999999999998751 1110 112578999999999999998763 33444
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.7e-18 Score=164.23 Aligned_cols=194 Identities=10% Similarity=-0.038 Sum_probs=139.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhc-----CCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a 439 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|||+|
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 107 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 369999999999999999999999865 34567999999988888764 689999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
|...........++....+++|+.|+.++++++... + .++|++||...+.+ .++...
T Consensus 108 g~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------------~~~~~~ 169 (260)
T 3gem_A 108 SEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG------------------SSKHIA 169 (260)
T ss_dssp CCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC------------------CSSCHH
T ss_pred CccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC------------------CCCcHh
Confidence 976322222223445568899999999999998642 3 47888888765521 223468
Q ss_pred chhhHHHHHHHHHhccCee--EeEEeeeecCCCCChhhH----HHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--C
Q 005949 515 YSKTKAMVEELLKEYDNVC--TLRVRMPISSDLNNPRNF----ITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--L 586 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~ 586 (668)
|+.||...+.+.+.+...+ ++++..++|+.+..+... ...+.... ...-+...+|+|++++.+++.. .
T Consensus 170 Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~----p~~r~~~~edva~~v~~L~~~~~it 245 (260)
T 3gem_A 170 YCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKS----ALGIEPGAEVIYQSLRYLLDSTYVT 245 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------C----CSCCCCCTHHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcC----CCCCCCCHHHHHHHHHHHhhCCCCC
Confidence 9999999999888764221 499999999998876421 11111111 1123456899999999999654 5
Q ss_pred CceeeecCCCccC
Q 005949 587 RGIWNFTNPGVVS 599 (668)
Q Consensus 587 ~g~~ni~~~~~~s 599 (668)
+.++++.+|..++
T Consensus 246 G~~i~vdGG~~~~ 258 (260)
T 3gem_A 246 GTTLTVNGGRHVK 258 (260)
T ss_dssp SCEEEESTTTTTC
T ss_pred CCEEEECCCcccC
Confidence 6799999887654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.6e-18 Score=163.29 Aligned_cols=191 Identities=16% Similarity=0.066 Sum_probs=142.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 84 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999865 24568999999988888765 789
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||..... ......++....+++|+.|+.++++++ ++.+. ++|++||...+.+
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 147 (246)
T 3osu_A 85 VLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG----------------- 147 (246)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-----------------
Confidence 999999977211 112234455678999999999999999 44444 7888888765522
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.++.+.|+.||...+.+.+.+.. ..++++..++|+.+..+. .+...+....+ ...+...+|+|+++
T Consensus 148 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p----~~r~~~~~dva~~v 222 (246)
T 3osu_A 148 -NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIP----LARFGQDTDIANTV 222 (246)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCT----TCSCBCHHHHHHHH
T ss_pred -CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCC----CCCCcCHHHHHHHH
Confidence 12346899999999998887643 458999999999988764 22233322211 22466789999999
Q ss_pred HHHHhcc----CCceeeecCCC
Q 005949 579 IEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~ 596 (668)
+.++... .+.+|++.+|.
T Consensus 223 ~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 223 AFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HHHTSGGGTTCCSCEEEESTTS
T ss_pred HHHhCccccCCCCCEEEeCCCc
Confidence 9998754 36799998874
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.6e-18 Score=166.01 Aligned_cols=202 Identities=15% Similarity=0.118 Sum_probs=140.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------------cccccccCChhHHHHHhhhc--
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------------EYGKGRLEDCSSLIADVQSV-- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------------~~~~~D~~d~~~~~~~l~~~-- 430 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.+
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA 87 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 579999999999999999999999854 23457999999988888775
Q ss_pred ---CC-CEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCC
Q 005949 431 ---KP-THVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSG 499 (668)
Q Consensus 431 ---~~-d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~ 499 (668)
++ |+|||+||...... ......+....+++|+.|+.++++++... + .++|++||...+.+
T Consensus 88 ~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 158 (264)
T 2pd6_A 88 CFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG--------- 158 (264)
T ss_dssp HHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC---------
T ss_pred HhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC---------
Confidence 34 99999999762100 12234556678899999999999998764 3 37888888754421
Q ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhH
Q 005949 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 500 ~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
.++.+.|+.||...|.+++.+... .++++.+++|+.++++.. +.......-........+.+.+|+
T Consensus 159 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 229 (264)
T 2pd6_A 159 ---------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDV 229 (264)
T ss_dssp ---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHH
T ss_pred ---------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHH
Confidence 123468999999999988876433 689999999999998852 111111000000011356789999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccCHHHH
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVSHNEI 603 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~ 603 (668)
|++++.++... .+..+++.++..++...+
T Consensus 230 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 230 ADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 99999998753 466899998877665544
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=163.89 Aligned_cols=224 Identities=19% Similarity=0.139 Sum_probs=155.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||+|+||++++++|+++ +++|++.+|... .+..+... ...++.++.+|++|.+.+.++++.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAE--RLRELEVA-HGGNAVGVVGDVRSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-TBTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHH--HHHHHHHH-cCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999999 689999988642 12221111 134788999999999988877643
Q ss_pred CCCCEEEEcCccCCcccc---------cCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ESIDTIMHFAAQTHVDNS---------FGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~---------~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||....... .+++...+++|+.++.++++++...- .-.++|++||...+....
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------- 150 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG------- 150 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS-------
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC-------
Confidence 379999999997532111 11245678899999999998875421 126999999977654322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCC--h----HH--HHHHHHHcCCCceeec
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEK--L----IP--KFILLAMRGLPLPIHG 217 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~--~----~~--~~~~~~~~~~~~~~~~ 217 (668)
+...|+.+|...+.+.+.++.++ ++++..+.||.|..+...... . .. .+........+
T Consensus 151 -------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 218 (281)
T 3zv4_A 151 -------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP----- 218 (281)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT-----
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC-----
Confidence 23469999999999999988764 399999999999887532110 0 00 01111111111
Q ss_pred CCCceEeceeHHHHHHHHHHHHh-cC---CCCceEEEcCCCc
Q 005949 218 DGSNVRSYLYCEDVAEAFECILH-KG---EVGHVYNVGTKKE 255 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~-~~---~~~~~~ni~~~~~ 255 (668)
...+...+|+|.+++.++. .. ..|+.+++.+|..
T Consensus 219 ----~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 219 ----IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp ----TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred ----CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 1235678899999999887 33 2578999988753
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-17 Score=163.01 Aligned_cols=227 Identities=11% Similarity=0.037 Sum_probs=155.3
Q ss_pred CCCCCCCeEEEEcC--CChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MATYTPKNILITGA--AGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~~~~~~~vLVtGg--tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|..+++|+|||||| +|+||+++++.|+++ +++|++.+|..... ++.+... ...++.++.+|++|.+.+.+++..
T Consensus 2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRL-IQRITDR-LPAKAPLLELDVQNEEHLASLAGR 77 (269)
T ss_dssp CCTTTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHH-HHHHHTT-SSSCCCEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHH-HHHHHHh-cCCCceEEEccCCCHHHHHHHHHH
Confidence 44567789999999 999999999999999 68899888864210 1111111 123578899999999998887743
Q ss_pred -----C---CCCEEEEcCccCCc---------ccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCC
Q 005949 79 -----E---SIDTIMHFAAQTHV---------DNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 79 -----~---~~d~Vih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~ 140 (668)
. ++|+|||+||.... ....+++...+++|+.++.++++++...- .-.++|++||...++..
T Consensus 78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~- 156 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP- 156 (269)
T ss_dssp HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT-
T ss_pred HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC-
Confidence 1 79999999997541 12334456788999999999999887531 12589999987653221
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC------CCChH----HHHHHHH
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF------PEKLI----PKFILLA 207 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~------~~~~~----~~~~~~~ 207 (668)
....|+.+|...+.+.+.++.++ ++++.+++||.|..+... ..... ..+....
T Consensus 157 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (269)
T 2h7i_A 157 --------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW 222 (269)
T ss_dssp --------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhh
Confidence 24579999999999999887653 899999999998765210 00000 0011111
Q ss_pred HcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 208 MRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
....++ .|.+...+|+|++++.++.... .|+.+++.+|.
T Consensus 223 ~~~~p~--------~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 223 DQRAPI--------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp HHHCTT--------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred hccCCc--------ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 111111 0125577899999999886532 46788888764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.8e-18 Score=166.68 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=141.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc---------------------------ccccccCChhHHHHHhhhc-----C
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE---------------------------YGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~---------------------------~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|+++++++++.. +
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 86 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999998652 2457999999888888754 6
Q ss_pred CCEEEEcccccCCCC-ccc----cccccccceehhhhhhHHHHHHHHHc----CCcEEEEeccee-EeecCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPN-VDW----CESHKTDTIRTNVAGTLTLADVCRDH----GILMMNYATGCI-FEYDAAHPEGSGIG 501 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~-~~~----~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~~~v~~sS~~v-y~~~~~~p~~~~~~ 501 (668)
+|+|||+||...... ... ..++....+++|+.|+.++++++... +.++|++||... +.+
T Consensus 87 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 155 (278)
T 1spx_A 87 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA----------- 155 (278)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-----------
T ss_pred CCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC-----------
Confidence 799999999762100 011 33455677899999999999998764 567888888765 311
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH---------------HHHhhcccceee
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF---------------ITKISRYNKVVN 563 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~---------------~~~~~~~~~~~~ 563 (668)
.++...|+.||...|.+.+.+.. ..++++..++|+.+.++..- ...+.. . .
T Consensus 156 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~-~ 224 (278)
T 1spx_A 156 -------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE---C-V 224 (278)
T ss_dssp -------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH---H-C
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh---c-C
Confidence 12346799999999999887642 35899999999999887421 011110 0 0
Q ss_pred cCCCcccHhhHHHHHHHHHhcc-----CCceeeecCCCccCHHHHHHHHHhhc
Q 005949 564 IPNSMTVLDELLPISIEMAKRN-----LRGIWNFTNPGVVSHNEILEMYKKYI 611 (668)
Q Consensus 564 ~~~~~~~v~D~a~~~~~~~~~~-----~~g~~ni~~~~~~s~~e~~~~i~~~~ 611 (668)
....+.+.+|+|++++.++..+ .+.+|++.++..+++.|+++.+.+.+
T Consensus 225 p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 225 PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 1135788999999999998642 26689999999999999999988754
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-17 Score=162.06 Aligned_cols=193 Identities=12% Similarity=0.052 Sum_probs=140.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 93 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999854 34568999999988887753 6899
Q ss_pred EEEcccccC--CCCccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||... .+..+....+....+++|+.++.++++++.. .+. +++++||...+.. .
T Consensus 94 vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~ 157 (260)
T 3awd_A 94 LVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV----------------N 157 (260)
T ss_dssp EEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------C
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc----------------C
Confidence 999999762 0011122334467789999999999999864 344 6777777654321 1
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~ 576 (668)
+..+.+.|+.||...|.+++.+... .++++.+++|+.++++..- ...+.... ....+.+.+|+|+
T Consensus 158 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~ 233 (260)
T 3awd_A 158 RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGT----PMGRVGQPDEVAS 233 (260)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTC----TTSSCBCHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcC----CcCCCCCHHHHHH
Confidence 1123368999999999999887543 6899999999999998521 11111111 1135788999999
Q ss_pred HHHHHHhcc----CCceeeecCCC
Q 005949 577 ISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~ 596 (668)
+++.++... .+.+||+.++.
T Consensus 234 ~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 234 VVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhCchhccCCCcEEEECCce
Confidence 999998653 35589998874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.6e-17 Score=171.91 Aligned_cols=222 Identities=15% Similarity=0.137 Sum_probs=153.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccC-CccccCC--CcCCCCeEEEEccCCCHHHHHHHhccC-
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCS-NLKNLIP--SKASSNFKFVKGDIASADLVNFLLITE- 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~-~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 79 (668)
.+++||||||+|+||.+++++|+++ ++ +|++++|..... ....+.. .....++.++.+|++|.+.+.+++...
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 4579999999999999999999999 45 588888864311 1111111 112346889999999999999888543
Q ss_pred ---CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccc-cCCCCCCcCCCCCCCC
Q 005949 80 ---SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV-YGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ---~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~ 151 (668)
++|+|||+||..... ...++....+++|+.|+.++++++...+ .++||++||... +|...
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~g----------- 370 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG----------- 370 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT-----------
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCCC-----------
Confidence 579999999976532 2333455788899999999999998865 899999999654 44332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
...|+.+|...+.+.+.+.. .|+++++++||.+.+++...... . .. + . .....+++.+|+
T Consensus 371 ----~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~~~-----~-----~~--~-~--~~g~~~i~~e~~ 430 (486)
T 2fr1_A 371 ----LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEGPV-----A-----DR--F-R--RHGVIEMPPETA 430 (486)
T ss_dssp ----CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC------------------------C-T--TTTEECBCHHHH
T ss_pred ----CHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccchhH-----H-----HH--H-H--hcCCCCCCHHHH
Confidence 35699999999999887654 49999999999998875421100 0 00 0 0 112357899999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHH
Q 005949 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDI 265 (668)
Q Consensus 232 a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i 265 (668)
++++..+++.+... +.+. .+.+..+...+
T Consensus 431 a~~l~~~l~~~~~~--~~v~---~~d~~~~~~~~ 459 (486)
T 2fr1_A 431 CRALQNALDRAEVC--PIVI---DVRWDRFLLAY 459 (486)
T ss_dssp HHHHHHHHHTTCSS--CEEC---EECHHHHHHHH
T ss_pred HHHHHHHHhCCCCe--EEEE---eCCHHHHhhhh
Confidence 99999999876432 2232 24566655433
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-17 Score=160.16 Aligned_cols=195 Identities=15% Similarity=0.113 Sum_probs=145.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 92 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITV 92 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999854 34678999999988888754 7899
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|||+||.......+...++....+++|+.|+.++++++. +.+ .++|++||...+. +.
T Consensus 93 lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~ 154 (256)
T 3gaf_A 93 LVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN------------------TN 154 (256)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC------------------CC
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC------------------CC
Confidence 999999773212233445667789999999999999984 333 3788888876542 12
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
++...|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....+.... ....+.+.+|+|++++
T Consensus 155 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----p~~r~~~~~dva~~~~ 230 (256)
T 3gaf_A 155 VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT----PLGRLGEAQDIANAAL 230 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTC----TTSSCBCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcC----CCCCCCCHHHHHHHHH
Confidence 3347899999999999888643 3579999999999988741 111111111 1235678999999999
Q ss_pred HHHhcc----CCceeeecCCCccCH
Q 005949 580 EMAKRN----LRGIWNFTNPGVVSH 600 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~s~ 600 (668)
.++... .+.++++.+|...++
T Consensus 231 ~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 231 FLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred HHcCCcccCccCCEEEECCCccccC
Confidence 998643 467999999877664
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=160.45 Aligned_cols=192 Identities=14% Similarity=0.073 Sum_probs=139.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+++++||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999999999999854 23467999999888887754 68
Q ss_pred CEEEEcccccCCCC----ccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPN----VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 433 d~Vih~a~~~~~~~----~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
|+|||+||...... .....++....+++|+.++.++++++. +.+. +++++||...+.+
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------- 148 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA------------- 148 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------------
Confidence 99999999762111 112234566788899999988777764 3454 7788888765421
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHh
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~ 572 (668)
.++.+.|+.||...|.+++.+... .++++.+++|+.++++..- ...+.... ....+.+.+
T Consensus 149 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 219 (250)
T 2cfc_A 149 -----FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARI----PQKEIGTAA 219 (250)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTC----TTCSCBCHH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcC----CCCCCcCHH
Confidence 123478999999999999887533 4899999999999998521 11111111 112467899
Q ss_pred hHHHHHHHHHhcc----CCceeeecCCC
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
|+|++++.++..+ .+.++++.+|.
T Consensus 220 dva~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 220 QVADAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHHHHHHHHcCchhhcccCCEEEECCce
Confidence 9999999999753 35688887764
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=163.33 Aligned_cols=202 Identities=15% Similarity=0.102 Sum_probs=143.8
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
+|++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. +
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 34679999999999999999999999854 34568999999998888865 7
Q ss_pred CCEEEEcccccC---CCCccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTG---RPNVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 432 ~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
+|+|||+||... .+..+...++....+++|+.++.++++++ ++.+. +++++||...+..
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~------------- 152 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA------------- 152 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC-------------
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc-------------
Confidence 899999999421 01112234455678899999999999998 55554 7778877643311
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.+.++.+.|+.||...+.+++.+.. ..++++..++|+.++++. .+................+...+|+|+++
T Consensus 153 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v 229 (264)
T 3i4f_A 153 ---PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTI 229 (264)
T ss_dssp ---CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHH
T ss_pred ---CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence 1123447899999999999887643 368999999999999885 22222111111111112466799999999
Q ss_pred HHHHhcc----CCceeeecCCCccC
Q 005949 579 IEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~~s 599 (668)
+.++... .+.+|++.+|-...
T Consensus 230 ~~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 230 SFLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp HHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred HHHcCcccCCCCCcEEEEcCceeec
Confidence 9999753 46799998875543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.7e-17 Score=156.30 Aligned_cols=220 Identities=11% Similarity=0.073 Sum_probs=146.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHh-cc-CCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLL-IT-ESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~-~~-~~~d 82 (668)
||+||||||+|+||+++++.|+++ +++|++++|.... ...+.. .....++..+ |..+.+.+.+.+ +. .++|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQ--KDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGS--HHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHH--HHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999 6889998885421 111100 0001233333 655544433222 11 3799
Q ss_pred EEEEcCccC-Cc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 83 TIMHFAAQT-HV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 83 ~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
+|||+||.. .. ....+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------- 140 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK------------- 140 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT-------------
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCC-------------
Confidence 999999976 32 12233456788999999999988774 333 57999999987654321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHH------HHHHHHHcCCCceeecCCCceEe
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIP------KFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...+.+.+.++.+. ++++.+++||.|+||........+ .......... ....
T Consensus 141 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~---------p~~~ 210 (254)
T 1zmt_A 141 -ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT---------ALQR 210 (254)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS---------SSSS
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC---------CCCC
Confidence 24579999999999999887653 899999999999888642211111 1111111110 1113
Q ss_pred ceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 225 YLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
+.+.+|+|++++.++.... .|+.+++.+|..
T Consensus 211 ~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 211 LGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred CcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence 6789999999999887543 578899987753
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-16 Score=156.97 Aligned_cols=208 Identities=16% Similarity=0.144 Sum_probs=147.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-c----cccCC--CcCCCCeEEEEccCCCHHHHHHHh
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-L----KNLIP--SKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~----~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
+++|++|||||+|+||++++++|+++ +++|++++|...... + +.... .....++.++.+|++|.+++.+++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 45789999999999999999999999 678999988653211 0 00000 011346889999999999988877
Q ss_pred cc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcC
Q 005949 77 IT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 77 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.. .++|++||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---- 160 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW---- 160 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC----
Confidence 43 2899999999976432 223345578889999999999988654 1246999999976543321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
.+...|+.+|...+.+.+.++.+ +++++..+.||.+... .+.+....... +
T Consensus 161 ---------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t---------~~~~~~~~~~~-~------- 214 (285)
T 3sc4_A 161 ---------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT---------AAVQNLLGGDE-A------- 214 (285)
T ss_dssp ---------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC---------HHHHHHHTSCC-C-------
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc---------HHHHhhccccc-c-------
Confidence 12357999999999999998876 4899999999843321 12222222211 1
Q ss_pred eEeceeHHHHHHHHHHHHhcCC
Q 005949 222 VRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
...+...+|+|++++.++..+.
T Consensus 215 ~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 215 MARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp CTTCBCTHHHHHHHHHHHTSCT
T ss_pred ccCCCCHHHHHHHHHHHhCCcc
Confidence 1235688999999999997653
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=161.19 Aligned_cols=192 Identities=13% Similarity=0.063 Sum_probs=136.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-CCCEEEEcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGV 441 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~ 441 (668)
++|+||||+|+||+++++.|+++|++| .++.+|+++.+++.++++.. ++|+|||+||.
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGI 94 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 589999999999999999999999864 34568899999999998876 68999999997
Q ss_pred cCCC-CccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 442 TGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 442 ~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
.... ......++....+++|+.++.++++++.. .+ .++|++||...+.+ .++.+.|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~Y 156 (249)
T 3f9i_A 95 TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG------------------NPGQANY 156 (249)
T ss_dssp ------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C------------------CSCSHHH
T ss_pred CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC------------------CCCCchh
Confidence 6211 11234456678899999999999988743 33 37888888776632 1234689
Q ss_pred hhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-
Q 005949 516 SKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN- 585 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~- 585 (668)
+.||...|.+++.+.. ..++++..++|+.+..+.. ....+... .....+.+.+|+|++++.++...
T Consensus 157 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~~~l~s~~~ 232 (249)
T 3f9i_A 157 CASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQK----IPLGTYGIPEDVAYAVAFLASNNA 232 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHH----CTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHcCCcc
Confidence 9999999998877643 3589999999999887641 11111111 11236778999999999999754
Q ss_pred ---CCceeeecCCCc
Q 005949 586 ---LRGIWNFTNPGV 597 (668)
Q Consensus 586 ---~~g~~ni~~~~~ 597 (668)
.+++|++.+|..
T Consensus 233 ~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 233 SYITGQTLHVNGGML 247 (249)
T ss_dssp TTCCSCEEEESTTSS
T ss_pred CCccCcEEEECCCEe
Confidence 467899988754
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=161.47 Aligned_cols=196 Identities=15% Similarity=0.067 Sum_probs=141.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+|||
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~ 92 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCA 92 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 589999999999999999999999865 23568999999988888754 6899999
Q ss_pred cccccCCC-CccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 438 ~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+||..... ..+...++....+++|+.++.++++++... + .+++++||...+.+ .+
T Consensus 93 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~ 154 (263)
T 3ak4_A 93 NAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG------------------AP 154 (263)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------------------CT
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC------------------CC
Confidence 99976211 112233455678899999999999988653 3 47888888664411 12
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH-----------HHhhcccceeecCCCcccHhhH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-----------TKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-----------~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+...|+.||...|.+.+.+.. ..++++..++|+.++++.. +. ......-........+.+.+|+
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 234 (263)
T 3ak4_A 155 LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDV 234 (263)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHH
Confidence 346899999999998887643 2489999999999998852 11 0000000000112357889999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCc
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|++++.++... .+.+|++.+|..
T Consensus 235 A~~v~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 235 ADVVVFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHhCccccCCCCCEEEECcCEe
Confidence 99999998753 456899988754
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-16 Score=149.46 Aligned_cols=215 Identities=13% Similarity=0.193 Sum_probs=154.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|+|+||||||++.||+++++.|+++ +.+|++.++... .+..+.. ...++..+.+|++|++++.+++++ .
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~--~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEK--RSADFAK--ERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHT--TCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHH--hcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999 789999998642 2222211 235788999999999998877632 4
Q ss_pred CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|.+||...+.+...
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~------------ 142 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD------------ 142 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC------------
Confidence 79999999997543 2234556788999999999888766432 11279999999776543321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
...|+.+|.....+.+.++.++ ++++..+-||.|-.+... .+... ....-+ + .-+...+|+
T Consensus 143 --~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~--~~~~~----~~~~~P--l-------~R~g~pedi 205 (247)
T 3ged_A 143 --SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ--EFTQE----DCAAIP--A-------GKVGTPKDI 205 (247)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----CCHH----HHHTST--T-------SSCBCHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH--HHHHH----HHhcCC--C-------CCCcCHHHH
Confidence 3469999999999999887664 799999999998766432 12212 122111 1 124578999
Q ss_pred HHHHHHHHhcCC-CCceEEEcCCC
Q 005949 232 AEAFECILHKGE-VGHVYNVGTKK 254 (668)
Q Consensus 232 a~ai~~~~~~~~-~~~~~ni~~~~ 254 (668)
|.+++.++...- .|+.+.+.+|-
T Consensus 206 A~~v~fL~s~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 206 SNMVLFLCQQDFITGETIIVDGGM 229 (247)
T ss_dssp HHHHHHHHHCSSCCSCEEEESTTG
T ss_pred HHHHHHHHhCCCCCCCeEEECcCH
Confidence 999999887532 57888888774
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.1e-17 Score=154.37 Aligned_cols=224 Identities=15% Similarity=0.100 Sum_probs=160.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
.++|++|||||++.||+++++.|+++ +.+|++.+|.......+.+. ....++..+.+|++|++.+.+++...++|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~--~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIA--KDGGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHH--HTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHH--HhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 56899999999999999999999999 78899998864321111111 224568899999999999988887778999
Q ss_pred EEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 84 IMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 84 Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
+||+||.... +.+.+++...+++|+.|+..+.+++. +.+.-.++|.+||...+.... .
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~--------------~ 148 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI--------------R 148 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS--------------S
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC--------------C
Confidence 9999997542 23445677899999999999887643 223347999999976643322 1
Q ss_pred CChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
...|+.+|.....+.+..+.++ |+++..+-||.|-.|.......-+...+.....-++. -+...+|+|
T Consensus 149 ~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA 219 (247)
T 4hp8_A 149 VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG---------RWGHSEDIA 219 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS---------SCBCTHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC---------CCcCHHHHH
Confidence 3469999999999999887654 8999999999998764310000011222233332221 245678999
Q ss_pred HHHHHHHhcCC---CCceEEEcCCC
Q 005949 233 EAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 233 ~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+++.++.... .|+.+.+.+|-
T Consensus 220 ~~v~fLaSd~a~~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 220 GAAVFLSSAAADYVHGAILNVDGGW 244 (247)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhcCCcCCeEEECccc
Confidence 99998876432 57788888763
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.3e-17 Score=160.32 Aligned_cols=198 Identities=17% Similarity=0.159 Sum_probs=142.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc-------------cccccCChhHHHHHhhhc-----CCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------------GKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------------~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~~ 445 (668)
++++||||+|+||+++++.|+++|++|.+ +.+|++|.+++.++++.. ++|+|||+||.....
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~ 108 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG 108 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 47999999999999999999999997632 357899988887777654 789999999977211
Q ss_pred C-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 446 N-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 446 ~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
. .+...++....+++|+.|+.++++++ ++.+. ++|++||...+. +.++.+.|+.||
T Consensus 109 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~asK 170 (266)
T 3uxy_A 109 RITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR------------------PGPGHALYCLTK 170 (266)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB------------------CCTTBHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC------------------CCCCChHHHHHH
Confidence 1 12233455667889999999999998 44444 788888876542 123346899999
Q ss_pred HHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhh-------cccceeecCCCcccHhhHHHHHHHHHhcc--
Q 005949 520 AMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKIS-------RYNKVVNIPNSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 520 ~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~-------~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-- 585 (668)
...|.+++.+.. ..++++..++|+.+.++.. ...... ..-........+...+|+|++++.++...
T Consensus 171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~ 250 (266)
T 3uxy_A 171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAAR 250 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 999999887643 2489999999999998752 111100 00000011235678999999999998754
Q ss_pred --CCceeeecCCCccC
Q 005949 586 --LRGIWNFTNPGVVS 599 (668)
Q Consensus 586 --~~g~~ni~~~~~~s 599 (668)
.+.++++.+|..+|
T Consensus 251 ~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 251 YLCGSLVEVNGGKAVA 266 (266)
T ss_dssp TCCSCEEEESTTCCCC
T ss_pred CCcCCEEEECcCEeCC
Confidence 36789998886654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-17 Score=161.16 Aligned_cols=198 Identities=15% Similarity=0.077 Sum_probs=143.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGAD 87 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999865 23457999999988888754 689
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+...++....+++|+.++.++++++. +.+. ++|++||...+.+
T Consensus 88 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 150 (263)
T 3ai3_A 88 ILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP----------------- 150 (263)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------------
Confidence 99999997621 11112334556778999999999999885 3444 7888888776522
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHh-----------hcc-cceeecCCCccc
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKI-----------SRY-NKVVNIPNSMTV 570 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~-----------~~~-~~~~~~~~~~~~ 570 (668)
.++...|+.||...|.+.+.+.. ..++++..++|+.+++|.. ....+ ... .........+.+
T Consensus 151 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (263)
T 3ai3_A 151 -LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFAS 229 (263)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBC
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcC
Confidence 12346899999999999888643 2589999999999999852 11110 000 000011235788
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCCCccC
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
.+|+|++++.++... .+.+|++.+|...|
T Consensus 230 ~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 230 PEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 999999999998753 36689999887655
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=163.02 Aligned_cols=204 Identities=13% Similarity=0.102 Sum_probs=145.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++++|... .+..+.. .....++.++.+|++|.+.+.+++..
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKE--TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999 688999988642 1111110 01123588999999999988877642
Q ss_pred ---CCCCEEEEc-CccCCcc---cccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 ---ESIDTIMHF-AAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 ---~~~d~Vih~-a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|+|||+ ||..... ...++....+++|+.|+.++++++...- ..+++|++||...+.+..
T Consensus 102 ~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 172 (286)
T 1xu9_A 102 KLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP--------- 172 (286)
T ss_dssp HHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT---------
T ss_pred HHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC---------
Confidence 379999999 5654321 1223445788999999999998775420 136999999987654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+...|+.+|...|.+++.++.+. ++++++++||.|.++.. .....+ .....
T Consensus 173 -----~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~----------~~~~~~---------~~~~~ 228 (286)
T 1xu9_A 173 -----MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA----------MKAVSG---------IVHMQ 228 (286)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH----------HHHSCG---------GGGGG
T ss_pred -----CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH----------HHhccc---------cccCC
Confidence 24579999999999998877654 89999999999876521 111111 01124
Q ss_pred ceeHHHHHHHHHHHHhcCCC
Q 005949 225 YLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~~ 244 (668)
+++.+|+|++++.+++.+..
T Consensus 229 ~~~~~~vA~~i~~~~~~~~~ 248 (286)
T 1xu9_A 229 AAPKEECALEIIKGGALRQE 248 (286)
T ss_dssp CBCHHHHHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCc
Confidence 67899999999999886543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-18 Score=163.12 Aligned_cols=181 Identities=12% Similarity=0.091 Sum_probs=129.6
Q ss_pred CCcE-EEEEcCCcchhHHHHHHHH-HcCCccc---------------------ccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 382 PSMK-FLIYGRTGWIGGLLGKLCE-KEGIPFE---------------------YGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 382 ~~mk-vli~G~~G~iG~~l~~~l~-~~g~~v~---------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
+||| |+||||+|+||+++++.|+ ++|++|. ++.+|++|++++.++++++ |+|||+
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~vv~~ 80 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNA--EVVFVG 80 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTC--SEEEES
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCC--CEEEEc
Confidence 4565 9999999999999999999 8998652 2456899999999999866 999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
||.. |+. +.+++++|++.++ ++|++||..+|+..... ..+...+ ...+.|+.
T Consensus 81 ag~~------------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-------~~~~~~~-~~~~~y~~ 133 (221)
T 3r6d_A 81 AMES------------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-------LEKWTFD-NLPISYVQ 133 (221)
T ss_dssp CCCC------------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-------HHHHHHH-TSCHHHHH
T ss_pred CCCC------------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-------ccccccc-ccccHHHH
Confidence 9832 344 8999999999987 78888998877532211 0011111 11127999
Q ss_pred hHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHH--hcc---CCceeee
Q 005949 518 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMA--KRN---LRGIWNF 592 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~--~~~---~~g~~ni 592 (668)
+|..+|++++. .+++++++||+.++++... ...............+++.+|+|++++.++ ..+ .++.+.+
T Consensus 134 ~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~-~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i 208 (221)
T 3r6d_A 134 GERQARNVLRE----SNLNYTILRLTWLYNDPEX-TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV 208 (221)
T ss_dssp HHHHHHHHHHH----SCSEEEEEEECEEECCTTC-CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred HHHHHHHHHHh----CCCCEEEEechhhcCCCCC-cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence 99999999976 5799999999999876210 000000011122335889999999999999 654 4567888
Q ss_pred cCCC
Q 005949 593 TNPG 596 (668)
Q Consensus 593 ~~~~ 596 (668)
+++.
T Consensus 209 ~~~~ 212 (221)
T 3r6d_A 209 GEPG 212 (221)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 7653
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.2e-17 Score=171.56 Aligned_cols=225 Identities=16% Similarity=0.137 Sum_probs=157.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccC-CccccCCC--cCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCS-NLKNLIPS--KASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~-~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
.+++||||||+|+||.+++++|+++ ++ +|++++|..... ....+... ....++.++.+|++|.+.+.+++...+
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 3579999999999999999999998 55 688888864221 11111111 123468899999999999999986667
Q ss_pred CCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc-ccCCCCCCcCCCCCCCCCCCC
Q 005949 81 IDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 81 ~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~~~~p 155 (668)
+|+|||+||..... ...++....+++|+.|+.++++++......++||++||.. ++|...
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g--------------- 400 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG--------------- 400 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT---------------
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC---------------
Confidence 99999999976532 1223445688999999999999998752378999999964 454432
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
...|+.+|...|.+++.+. ..|+++++++||.+.+.+... .... ..... .....++.+|+++++
T Consensus 401 ~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~-~~~~---~~~~~-----------~g~~~l~~e~~a~~l 464 (511)
T 2z5l_A 401 QGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA-GAGE---ESLSR-----------RGLRAMDPDAAVDAL 464 (511)
T ss_dssp BHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC-CHHH---HHHHH-----------HTBCCBCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc-cccH---HHHHh-----------cCCCCCCHHHHHHHH
Confidence 3469999999999998764 459999999999985443322 1111 11111 012357899999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICK 267 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~ 267 (668)
..++..+.. .+.+. .+.+..+...+..
T Consensus 465 ~~al~~~~~--~v~v~---~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 465 LGAMGRNDV--CVTVV---DVDWERFAPATNA 491 (511)
T ss_dssp HHHHHHTCS--EEEEC---CBCHHHHHHHHHH
T ss_pred HHHHhCCCC--EEEEE---eCCHHHHHhhhcc
Confidence 999987643 23333 2456666655543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=162.42 Aligned_cols=197 Identities=14% Similarity=0.070 Sum_probs=130.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhh------cCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQS------VKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~------~~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++. -++|
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 94 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 94 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 589999999999999999999999854 2356789999888887764 3689
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||..... ..+...++....+++|+.++.++++++ ++.+. ++|++||...+.+
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------------- 157 (266)
T 1xq1_A 95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS----------------- 157 (266)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-----------------
Confidence 999999976110 111234455677899999999999998 44454 7888888776632
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--HH-HHhhcccceeecCCCcccHhhHHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FI-TKISRYNKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
.++.+.|+.||...|.+++.+... .++++.+++|+.++++.. .. ......-........+.+.+|+|++++.+
T Consensus 158 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 236 (266)
T 1xq1_A 158 -ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFL 236 (266)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHHHHHH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 123468999999999999886433 489999999999998852 11 00000000000012467899999999999
Q ss_pred Hhcc----CCceeeecCCCcc
Q 005949 582 AKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~~~~ 598 (668)
+... .+.+|++.++...
T Consensus 237 ~~~~~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 237 CMPAASYITGQTICVDGGLTV 257 (266)
T ss_dssp TSGGGTTCCSCEEECCCCEEE
T ss_pred cCccccCccCcEEEEcCCccc
Confidence 8643 3568999887543
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=165.56 Aligned_cols=194 Identities=12% Similarity=0.061 Sum_probs=141.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||++++++|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 101 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 101 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999854 23567999999888888743 679
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeE-eecCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIF-EYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy-~~~~~~p~~~~~~~~ee~~~ 508 (668)
+|||+||...... .+....+....+++|+.++.++++++... +.++|++||...+ .+
T Consensus 102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~------------------ 163 (274)
T 1ja9_A 102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------------ 163 (274)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS------------------
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC------------------
Confidence 9999999762100 12233455678899999999999999775 4578888887655 21
Q ss_pred CCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhH--HHHhh-----cc--cce------eecCCCccc
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--ITKIS-----RY--NKV------VNIPNSMTV 570 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--~~~~~-----~~--~~~------~~~~~~~~~ 570 (668)
.++.+.|+.+|...|.+++.+... .++++.+++|+.++++..- ..... .. ... ......+++
T Consensus 164 ~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (274)
T 1ja9_A 164 IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGY 243 (274)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccC
Confidence 122367999999999999887533 4899999999999887421 00000 00 000 011236889
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCC
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
++|+|++++.++..+ .+.+||+.+|
T Consensus 244 ~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 244 PADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 999999999999753 3569999886
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.5e-17 Score=157.58 Aligned_cols=209 Identities=15% Similarity=0.103 Sum_probs=146.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccC--CCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDI--ASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl--~d~~~~~~~~~~ 78 (668)
+++|+||||||+|+||++++++|+++ +++|++++|.... +..+.. .....++.++.+|+ .|.+.+.+++..
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEAS--LAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHH--HHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 45789999999999999999999999 6789999886421 111111 11124567778877 898888777642
Q ss_pred -----CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..++|++||...+.+..
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---- 162 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRA---- 162 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCT----
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCC----
Confidence 379999999997532 12334556789999999999998873 333 57999999977654322
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
+...|+.+|.+.+.+.+.++.+ .++++..+.||.|..+. ........
T Consensus 163 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~----------~~~~~~~~--------- 213 (247)
T 3i1j_A 163 ----------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM----------RAQAYPDE--------- 213 (247)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH----------HHHHSTTS---------
T ss_pred ----------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc----------chhccccc---------
Confidence 2457999999999999998765 36889999999886541 11111111
Q ss_pred ceEeceeHHHHHHHHHHHHhcCC---CCceEEE
Q 005949 221 NVRSYLYCEDVAEAFECILHKGE---VGHVYNV 250 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni 250 (668)
....+...+|++++++.++.... .|+.+++
T Consensus 214 ~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 214 NPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred CccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence 11134578899999998886432 3555543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=161.90 Aligned_cols=190 Identities=16% Similarity=0.122 Sum_probs=141.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+|||
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 91 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDN 91 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999865 34567999999988888754 7899999
Q ss_pred cccccCCCC---ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN---VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 438 ~a~~~~~~~---~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
+||...... .+...++....+++|+.++.++++++ ++.+. ++|++||...+.+ .
T Consensus 92 nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------------~ 153 (271)
T 3tzq_B 92 NAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA------------------Y 153 (271)
T ss_dssp CCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB------------------C
T ss_pred CCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC------------------C
Confidence 999762101 12233455678899999999999999 55544 7888888765521 2
Q ss_pred CCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
++...|+.||...+.+++.+... +++++..++|+.++++.. +...+... .....+...+|+|++++
T Consensus 154 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~~r~~~p~dvA~~v~ 229 (271)
T 3tzq_B 154 DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATH----HLAGRIGEPHEIAELVC 229 (271)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTT----STTSSCBCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhc----CCCCCCcCHHHHHHHHH
Confidence 33468999999999998886433 689999999999998752 11111111 11234667999999999
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
.++... .+.++++.+|
T Consensus 230 ~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 230 FLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCcccCCcCCCEEEECCC
Confidence 998753 4678998887
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.71 E-value=9.4e-18 Score=162.95 Aligned_cols=192 Identities=11% Similarity=0.035 Sum_probs=137.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------c-cccccCChhHHHHHhhhc-----C
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------Y-GKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~-~~~D~~d~~~~~~~l~~~-----~ 431 (668)
|++|+||||+|+||++++++|+++|++|. . +.+|++|.++++++++.. +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 45899999999999999999999998642 2 567999998888877643 6
Q ss_pred CCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHH----HHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADV----CRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~----~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
+|+|||+||...... .....++....+++|+.++.+++++ +++.+. ++|++||...+.+.
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 146 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-------------- 146 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC--------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC--------------
Confidence 899999999762100 1223445567889999996655554 445565 77888887544221
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~ 576 (668)
++.+.|+.||...|.+++.+... .++++.+++|+.++++.. +...+.... ....+.+.+|+|+
T Consensus 147 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~ 218 (245)
T 2ph3_A 147 ----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI----PAGRFGRPEEVAE 218 (245)
T ss_dssp ----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC----TTCSCBCHHHHHH
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC----CCCCCcCHHHHHH
Confidence 12367999999999988876432 489999999999998742 111111111 1235789999999
Q ss_pred HHHHHHhcc----CCceeeecCCC
Q 005949 577 ISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~ 596 (668)
+++.++..+ .+..|++.++.
T Consensus 219 ~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 219 AVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHHhCcccccccCCEEEECCCC
Confidence 999998753 36689988763
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-16 Score=158.37 Aligned_cols=206 Identities=14% Similarity=0.106 Sum_probs=146.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-c----cccCC--CcCCCCeEEEEccCCCHHHHHHHh
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-L----KNLIP--SKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~----~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
+++|+||||||+|+||++++++|+++ +++|++++|...... + ..... .....++.++.+|++|.+++.+++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 35689999999999999999999999 688999988653211 0 00000 112346889999999999988887
Q ss_pred cc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcC
Q 005949 77 IT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 77 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
+. .++|+|||+||..... ...+++...+++|+.++.++++++... ....++|++||...+....
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~---- 196 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW---- 196 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC----
Confidence 43 3899999999975432 223445678999999999999988432 2257999999977654321
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
..+...|+.+|...+.+.+.++.++ ++++..+.||.+... .+........ ..
T Consensus 197 --------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T---------~~~~~~~~~~---------~~ 250 (346)
T 3kvo_A 197 --------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT---------AAMDMLGGPG---------IE 250 (346)
T ss_dssp --------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC---------HHHHHHCC-----------CG
T ss_pred --------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc---------HHHHhhcccc---------cc
Confidence 1224579999999999999988764 799999999964432 1222211111 11
Q ss_pred EeceeHHHHHHHHHHHHhc
Q 005949 223 RSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~ 241 (668)
..+...+|+|++++.++..
T Consensus 251 ~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 251 SQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp GGCBCTHHHHHHHHHHHTS
T ss_pred ccCCCHHHHHHHHHHHHhc
Confidence 2356789999999999976
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-17 Score=161.10 Aligned_cols=194 Identities=15% Similarity=0.105 Sum_probs=144.8
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHcCCcccc------------cccccCChhHHHHHhhhc-----CCCEEEEcccccC
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEY------------GKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG 443 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~------------~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~ 443 (668)
.|+++|+||||+|+||+++++.|+++|++|.. +..|++|.++++++++.+ ++|+|||+||...
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 34568999999999999999999999998633 346789999988888765 6899999999752
Q ss_pred CC--CccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 444 RP--NVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 444 ~~--~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
.. ......++....+++|+.++.++++++... +.++|++||...+. +.+....|+.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~s 161 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN------------------RTSGMIAYGAT 161 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc------------------CCCCCchhHHH
Confidence 11 122334566778899999999999999874 23688888876552 12334689999
Q ss_pred HHHHHHHHHhccCe-----eEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc-c----CCc
Q 005949 519 KAMVEELLKEYDNV-----CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR-N----LRG 588 (668)
Q Consensus 519 K~~~E~~~~~~~~~-----~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~-~----~~g 588 (668)
|...|.+++.+... .++++..++|+.+..+. ........+ ...+...+|+|++++.++.. . .+.
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~--~~~~~~~~~----~~~~~~~~dva~~i~~l~~~~~~~~~tG~ 235 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT--NRKYMSDAN----FDDWTPLSEVAEKLFEWSTNSDSRPTNGS 235 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH--HHHHCTTSC----GGGSBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc--hhhhccccc----ccccCCHHHHHHHHHHHhcCccccCCcce
Confidence 99999999887543 68999999999988763 222222211 22467799999999999987 2 466
Q ss_pred eeeecCCCcc
Q 005949 589 IWNFTNPGVV 598 (668)
Q Consensus 589 ~~ni~~~~~~ 598 (668)
++++.+++..
T Consensus 236 ~i~v~~g~~~ 245 (251)
T 3orf_A 236 LVKFETKSKV 245 (251)
T ss_dssp EEEEEEETTE
T ss_pred EEEEecCCcc
Confidence 8888876554
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-17 Score=162.79 Aligned_cols=195 Identities=15% Similarity=0.125 Sum_probs=137.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 106 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLD 106 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 479999999999999999999999865 34567999999998888765 789
Q ss_pred EEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 434 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
+|||+||.... +..+...++....+++|+.|+.++++++... +.++|++||...+.+..
T Consensus 107 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 175 (272)
T 4e3z_A 107 GLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA----------- 175 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT-----------
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC-----------
Confidence 99999997621 1112234556778999999999999998654 23688888876653211
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHH---HHhhcccceeecCCCcccHhhHHHH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI---TKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
.....|+.||...|.+++.+.. ..++++..++|+.+.++...- ...............+...+|+|++
T Consensus 176 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~ 249 (272)
T 4e3z_A 176 ------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADA 249 (272)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHHHHHHH
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHH
Confidence 1225699999999998887643 348999999999998874211 0000000000111245679999999
Q ss_pred HHHHHhcc----CCceeeecCC
Q 005949 578 SIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~ 595 (668)
++.++... .+.+|++.+|
T Consensus 250 i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 250 ILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCCccccccCCEEeecCC
Confidence 99999653 3668998876
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.71 E-value=6e-16 Score=150.32 Aligned_cols=229 Identities=15% Similarity=0.055 Sum_probs=160.5
Q ss_pred CCCCCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 1 MATYTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
|..+++|++|||||+| .||.++++.|+++ |.+|++.+|.... .............++..+.+|++|++++.++++
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHH
Confidence 7778899999999887 8999999999999 7889999886422 111111122234468899999999998877763
Q ss_pred c-----CCCCEEEEcCccCCcc--------cccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCc
Q 005949 78 T-----ESIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~ 143 (668)
. .++|++||+||..... ..++++...+++|+.++..+...+...- .-.++|++||........
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~--- 155 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ--- 155 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT---
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc---
Confidence 2 4799999999975421 1122233466788888888887765432 236899999976533221
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+........+.+.+.....-++.
T Consensus 156 -----------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------ 218 (256)
T 4fs3_A 156 -----------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK------ 218 (256)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS------
T ss_pred -----------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC------
Confidence 2356999999999999988765 48999999999998775433233344444444333221
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
-+...+|+|.+++.++... -.|+.+.+.+|-
T Consensus 219 ---R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 219 ---RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 252 (256)
T ss_dssp ---SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ---CCcCHHHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence 2457889999999888643 257888888764
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.4e-17 Score=156.73 Aligned_cols=224 Identities=13% Similarity=0.106 Sum_probs=157.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
.++|++|||||++.||+++++.|+++ |.+|++.+|... .+..... .....++..+.+|++|++++++++++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~--~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRAT--LLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHH--HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999 789999998642 1111111 11234688999999999998877632
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +.+.+++...+++|+.|+..+.+++.. .+.-.++|.+||...+....
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~-------- 154 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP-------- 154 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT--------
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC--------
Confidence 379999999997553 234455678899999999998876532 22247999999977654332
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|.....+.+..+.+ +|+++..+-||.|..|......--+.+.......-++. .+
T Consensus 155 ------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~ 219 (255)
T 4g81_D 155 ------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ---------RW 219 (255)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC---------SC
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC---------CC
Confidence 1346999999999999988765 48999999999998764310000011222222222221 24
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+|+|.+++.++... -.|+.+.+.+|.
T Consensus 220 g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~ 251 (255)
T 4g81_D 220 GRPEELIGTAIFLSSKASDYINGQIIYVDGGW 251 (255)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCchhCCCcCCEEEECCCe
Confidence 46779999999888543 257888888764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=159.72 Aligned_cols=191 Identities=12% Similarity=0.068 Sum_probs=130.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++|. ++.+|++|+++++++++.. ++|
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 85 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID 85 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999998652 3457899998888887754 689
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||..... .......+....+++|+.++.++++++.. .+. ++|++||...+.+.
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 149 (247)
T 2hq1_A 86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN---------------- 149 (247)
T ss_dssp EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------------
Confidence 999999976210 01223456677889999999998888764 344 78888886443211
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
++.+.|+.||...|.+++.+.. ..++++.+++|+.+..+.. +...+.... ....+.+.+|+|+++
T Consensus 150 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~ 223 (247)
T 2hq1_A 150 --AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI----PLKRFGTPEEVANVV 223 (247)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTS----TTSSCBCHHHHHHHH
T ss_pred --CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhC----CCCCCCCHHHHHHHH
Confidence 2236899999999999888643 2479999999998887631 111111111 113578899999999
Q ss_pred HHHHhcc----CCceeeecCCC
Q 005949 579 IEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~ 596 (668)
..++..+ .+.+||+.++.
T Consensus 224 ~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 224 GFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHcCcccccccCcEEEeCCCc
Confidence 9988653 35689998874
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.2e-18 Score=166.02 Aligned_cols=208 Identities=9% Similarity=-0.022 Sum_probs=138.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccc-----------cccccCChhHHHHHhhhc--CCCEEEEcccccCCCCccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEY-----------GKGRLEDCSSLIADVQSV--KPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~-----------~~~D~~d~~~~~~~l~~~--~~d~Vih~a~~~~~~~~~~ 449 (668)
|++|+||||+|+||+++++.|+++|++|.. +.+|++|+++++++++.+ ++|+|||+||.. ..
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~---~~-- 75 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG---PQ-- 75 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC---TT--
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCC---CC--
Confidence 467999999999999999999999998743 457888999999988876 689999999966 10
Q ss_pred cccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCC-----------CCCCCCCCC
Q 005949 450 CESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKE-----------EDTPNFTGS 513 (668)
Q Consensus 450 ~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~e-----------e~~~~~~~~ 513 (668)
.......+++|+.++.++++++.. .+ .++|++||...+......+. ....+.+ +..+.++..
T Consensus 76 -~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 1fjh_A 76 -TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNP-LALALEAGEEAKARAIVEHAGEQGGNL 153 (257)
T ss_dssp -CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCT-THHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred -cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccch-hhhhhcccchhhhhhhhhcccCCCCcc
Confidence 234677899999999999999863 33 47889999877632111110 0000000 002223456
Q ss_pred cchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--HHHHhhcccce---eecCCCcccHhhHHHHHHHHHhcc
Q 005949 514 FYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKISRYNKV---VNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~---~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
.|+.||...|.+++.+... .++++..++|+.+.++.. ........... ......+.+.+|+|++++.++..+
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~ 233 (257)
T 1fjh_A 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPA 233 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCch
Confidence 8999999999999887543 579999999999887641 10100000000 011124678999999999998754
Q ss_pred ----CCceeeecCCCc
Q 005949 586 ----LRGIWNFTNPGV 597 (668)
Q Consensus 586 ----~~g~~ni~~~~~ 597 (668)
.+..|++.++..
T Consensus 234 ~~~~tG~~~~vdgG~~ 249 (257)
T 1fjh_A 234 ASYVHGAQIVIDGGID 249 (257)
T ss_dssp GTTCCSCEEEESTTHH
T ss_pred hcCCcCCEEEECCCcc
Confidence 355788877643
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-17 Score=157.79 Aligned_cols=194 Identities=12% Similarity=0.040 Sum_probs=144.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc----cccCChhHHHHHhhhc-CCCEEEEcccccCC--CCcccccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK----GRLEDCSSLIADVQSV-KPTHVFNAAGVTGR--PNVDWCESHKTD 456 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~----~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~~--~~~~~~~~~~~~ 456 (668)
++++||||+|+||+++++.|+++|++|.... +|++|+++++++++.+ ++|+|||+||.... +..+...++...
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 86 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKY 86 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHh
Confidence 4699999999999999999999999885543 7999999999998875 68999999996621 112233455667
Q ss_pred ceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCee
Q 005949 457 TIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVC 533 (668)
Q Consensus 457 ~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 533 (668)
.+++|+.++.++++++... +.+++++||...+. +.++...|+.||...|.+.+.+....
T Consensus 87 ~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------~~~~~~~Y~asK~a~~~~~~~la~e~ 148 (223)
T 3uce_A 87 AFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK------------------VVANTYVKAAINAAIEATTKVLAKEL 148 (223)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS------------------CCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc------------------CCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999999999775 33678888876542 12334689999999999888864332
Q ss_pred E-eEEeeeecCCCCChhh----------HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--CCceeeecCCCccC
Q 005949 534 T-LRVRMPISSDLNNPRN----------FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVS 599 (668)
Q Consensus 534 ~-l~~~~~r~~~~~g~~~----------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s 599 (668)
. +++..+.|+.+..+.. +....... .....+...+|+|++++.++... .+.++++.+|..++
T Consensus 149 ~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~s 223 (223)
T 3uce_A 149 APIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSH----LPVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGGALLG 223 (223)
T ss_dssp TTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHH----STTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGGC
T ss_pred cCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhc----CCCCCccCHHHHHHHHHHHccCCCCCCcEEEecCCeecC
Confidence 2 8999999999988741 11111111 11235678999999999999865 46789998876543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-17 Score=159.34 Aligned_cols=191 Identities=14% Similarity=0.060 Sum_probs=139.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||++++++|+++|++|. ++.+|++|+++++++++.. ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999998652 2347899999988888754 689
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... ......+....+++|+.++.++++++... +. ++|++||...+.+.
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 145 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------------- 145 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------------
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----------------
Confidence 9999999762111 11233455678899999999999998653 44 78888887554221
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
++...|+.||...|.+.+.+... .++++.+++|+.++++.. +...+... .....+.+.+|+|+++
T Consensus 146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~ 219 (244)
T 1edo_A 146 --IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGT----IPLGRTGQPENVAGLV 219 (244)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTS----CTTCSCBCHHHHHHHH
T ss_pred --CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhc----CCCCCCCCHHHHHHHH
Confidence 23367999999999888776432 489999999999998742 11111111 1123578899999999
Q ss_pred HHHHhcc-----CCceeeecCCC
Q 005949 579 IEMAKRN-----LRGIWNFTNPG 596 (668)
Q Consensus 579 ~~~~~~~-----~~g~~ni~~~~ 596 (668)
+.++..+ .+.+|++.++.
T Consensus 220 ~~l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 220 EFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHhCCCccCCcCCCEEEeCCCc
Confidence 9998432 36689988864
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.70 E-value=6.5e-17 Score=169.64 Aligned_cols=220 Identities=19% Similarity=0.120 Sum_probs=152.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----C
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----E 79 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 79 (668)
++++++|||||+|.||.+++++|+++ +.+|++++|......+.... ...++.++.+|++|.+++.+++.. .
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~---~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVA---DKVGGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHH---HHHTCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHH---HHcCCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 67899888853222221111 112467899999999998877642 2
Q ss_pred --CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcC---CCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 80 --SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTG---QIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 80 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
++|+|||+||..... .+.+++...+++|+.|+.++++++.... ...+||++||...+....
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~---------- 355 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR---------- 355 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT----------
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC----------
Confidence 499999999986532 2334556789999999999999988641 257999999976543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHH-HHHHcCCCceeecCCCceEece
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFI-LLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i 226 (668)
....|+.+|...+.+.+.++.+ .|+++.++.||.|..+.... ++... ....... ....+.
T Consensus 356 ----g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~---------~l~r~g 419 (454)
T 3u0b_A 356 ----GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA---IPLATREVGRRLN---------SLFQGG 419 (454)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------------CHHHHHSB---------TTSSCB
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh---cchhhHHHHHhhc---------cccCCC
Confidence 2456999999988888887654 38999999999998875421 11000 0001111 111245
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+|+++++..++... ..|+.+++.++.
T Consensus 420 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 420 QPVDVAELIAYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp CHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred CHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence 7899999999888643 357889888764
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=8e-17 Score=157.26 Aligned_cols=193 Identities=12% Similarity=0.082 Sum_probs=138.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+|||
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~ 91 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVN 91 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEE
Confidence 479999999999999999999999854 34568999999888887652 6899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... ......+....+++|+.++.++++++. +.+. ++|++||...+.+. +..+
T Consensus 92 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------~~~~ 155 (254)
T 2wsb_A 92 SAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN----------------RPQF 155 (254)
T ss_dssp CCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------SSSC
T ss_pred CCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC----------------CCCc
Confidence 999762111 111223445678899999888777663 4444 78888887655221 1123
Q ss_pred CCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~ 580 (668)
.+.|+.||...|.+++.+... .++++.+++|+.++++..- ...+.... ....+.+.+|+|++++.
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~ 231 (254)
T 2wsb_A 156 ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMT----PMGRCGEPSEIAAAALF 231 (254)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTS----TTSSCBCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcC----CCCCCCCHHHHHHHHHH
Confidence 368999999999998886433 4899999999999998521 11111111 12357889999999999
Q ss_pred HHhcc----CCceeeecCCC
Q 005949 581 MAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~~ 596 (668)
++... .+.+|++.++.
T Consensus 232 l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 232 LASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCcccccccCCEEEECCCE
Confidence 98643 35688887763
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-17 Score=161.41 Aligned_cols=192 Identities=13% Similarity=0.144 Sum_probs=138.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||++++++|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID 87 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999864 23457899999888888754 689
Q ss_pred EEEEcccc-cC-CCCccccccccccceehhhhhhHHHHHHHHH----cC------CcEEEEecceeEeecCCCCCCCCCC
Q 005949 434 HVFNAAGV-TG-RPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG------ILMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 434 ~Vih~a~~-~~-~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~------~~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
+|||+||. .. .+.......+....+++|+.++.++++++.. .+ .+++++||...+..
T Consensus 88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 156 (258)
T 3afn_B 88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----------- 156 (258)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-----------
T ss_pred EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-----------
Confidence 99999996 31 0011122334566788999999999997743 22 46777777654420
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHh
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~ 572 (668)
+.++.+.|+.||...|.+++.+... .++++.+++|+.++++.. +...+.... ....+.+++
T Consensus 157 ------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 226 (258)
T 3afn_B 157 ------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGI----PMGRFGTAE 226 (258)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTC----TTCSCBCGG
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccC----CCCcCCCHH
Confidence 1123468999999999998886432 489999999999998852 222222211 123678999
Q ss_pred hHHHHHHHHHhcc-----CCceeeecCCC
Q 005949 573 ELLPISIEMAKRN-----LRGIWNFTNPG 596 (668)
Q Consensus 573 D~a~~~~~~~~~~-----~~g~~ni~~~~ 596 (668)
|+|++++.++... .+.+|++.++.
T Consensus 227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 227 EMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 9999999998753 35689998864
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-16 Score=151.59 Aligned_cols=225 Identities=15% Similarity=0.112 Sum_probs=157.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||++.||+++++.|+++ +.+|++.+|... .++.... .....++..+.+|++|++++.+++++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~--~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLED--RLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999 788999998642 1221111 11245788999999999998877642
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+.+..
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~------- 152 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGF------- 152 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSS-------
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCC-------
Confidence 479999999996432 233455678999999999888876643 33 47999999976543322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCCh-HHHHHHHHHcCCCceeecCCCceE
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKL-IPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|.....+.+..+.++ |+++..+-||.|-.|....... -....+......+ ++ .
T Consensus 153 -------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~-------~ 217 (254)
T 4fn4_A 153 -------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-LS-------S 217 (254)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-TC-------C
T ss_pred -------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-CC-------C
Confidence 13469999999999999887654 8999999999998774321110 0011111111100 00 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+...+|+|.+++.++... -.|+.+.+.+|-+
T Consensus 218 R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 218 RLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence 2457899999999888643 2578888887753
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-17 Score=164.40 Aligned_cols=199 Identities=13% Similarity=0.111 Sum_probs=142.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 94 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 94 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999854 23567899998888877763 479
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||...... .....++....+++|+.++.++++++... + .++|++||...+..... ..
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------~~ 163 (265)
T 1h5q_A 95 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----------SL 163 (265)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----------ET
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc-----------cc
Confidence 9999999762111 11233455667899999999999998653 2 47888888765532110 01
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
.+..+.+.|+.||...|.+++.+.. ..++++.+++|+.++++.. +....... .....+.+.+|+|++
T Consensus 164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~ 239 (265)
T 1h5q_A 164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASN----IPLNRFAQPEEMTGQ 239 (265)
T ss_dssp TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHT----CTTSSCBCGGGGHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhc----CcccCCCCHHHHHHH
Confidence 1223457899999999999988743 3489999999999998852 11111111 111347789999999
Q ss_pred HHHHHhcc----CCceeeecCCCc
Q 005949 578 SIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~~ 597 (668)
++.++... .+.+|++.+|..
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 240 AILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp HHHHHSGGGTTCCSCEEEECTTGG
T ss_pred HHhhccCchhcCcCcEEEecCCEe
Confidence 99998653 466899988754
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=6.7e-17 Score=158.10 Aligned_cols=196 Identities=13% Similarity=-0.004 Sum_probs=140.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhh------cCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQS------VKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~------~~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++. -++|
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 89 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 89 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 579999999999999999999999865 2356799999888877764 2689
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+...++....+++|+.++.++++++. +.+. ++|++||...+.+
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 152 (260)
T 2ae2_A 90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA----------------- 152 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------------
Confidence 99999997621 11122344556788999999999999984 3444 7888888765421
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc-------ce--eecCCCcccHhhHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN-------KV--VNIPNSMTVLDELL 575 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~-------~~--~~~~~~~~~v~D~a 575 (668)
.++...|+.||...|.+.+.+.. ..++++..++|+.+..+.. ....... .. ......+.+.+|+|
T Consensus 153 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA 229 (260)
T 2ae2_A 153 -VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV--EMTIQDPEQKENLNKLIDRCALRRMGEPKELA 229 (260)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHH--HHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHH
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcch--hhhccChhhHHHHHHHHhcCCCCCCCCHHHHH
Confidence 12346899999999999887643 3489999999999988741 1111000 00 00123578899999
Q ss_pred HHHHHHHhcc----CCceeeecCCCccC
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++++.++... .+.++++.+|...+
T Consensus 230 ~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 230 AMVAFLCFPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHcCccccCCCCCEEEECCCcccc
Confidence 9999998643 35688888875543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.7e-17 Score=159.02 Aligned_cols=196 Identities=12% Similarity=0.031 Sum_probs=141.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGR 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~ 444 (668)
++|+||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+|||+||....
T Consensus 15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~ 94 (269)
T 3vtz_A 15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQY 94 (269)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 589999999999999999999999975 34568999999998888765 78999999997621
Q ss_pred CCc-cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 445 PNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 445 ~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
... ....++....+++|+.|+.++++++.. .+ .++|++||...|.. .+....|+.|
T Consensus 95 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~Y~as 156 (269)
T 3vtz_A 95 SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA------------------TKNAAAYVTS 156 (269)
T ss_dssp CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB------------------CTTCHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC------------------CCCChhHHHH
Confidence 111 112334456788999999999998754 33 37888888776532 1234689999
Q ss_pred HHHHHHHHHhccCee--EeEEeeeecCCCCChhh--HHHH-----------hhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 519 KAMVEELLKEYDNVC--TLRVRMPISSDLNNPRN--FITK-----------ISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 519 K~~~E~~~~~~~~~~--~l~~~~~r~~~~~g~~~--~~~~-----------~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
|...|.+.+.+.... ++++..++|+.+..+.. .... ....-........+.+.+|+|++++.++.
T Consensus 157 Kaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s 236 (269)
T 3vtz_A 157 KHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLAS 236 (269)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 999999988864322 79999999999998752 1110 00000000112356789999999999987
Q ss_pred cc----CCceeeecCCCc
Q 005949 584 RN----LRGIWNFTNPGV 597 (668)
Q Consensus 584 ~~----~~g~~ni~~~~~ 597 (668)
.. .+.++++.+|..
T Consensus 237 ~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 237 DRSSFITGACLTVDGGLL 254 (269)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred CccCCCcCcEEEECCCcc
Confidence 53 467899988743
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-17 Score=161.11 Aligned_cols=194 Identities=14% Similarity=0.070 Sum_probs=142.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNV 108 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999864 34567999999988888755 7899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH-----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD-----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~-----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||...... .+...++....+++|+.|+.++++++.. .+.++|++||...+.+
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 170 (270)
T 3ftp_A 109 LVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG------------------ 170 (270)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------------
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC------------------
Confidence 999999762111 1223455667889999999999999853 2347888888765522
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.+....|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....+... .....+...+|+|++++
T Consensus 171 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~----~p~~r~~~pedvA~~v~ 246 (270)
T 3ftp_A 171 NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQ----IPLGRLGSPEDIAHAVA 246 (270)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTT----CTTCSCBCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhc----CCCCCCCCHHHHHHHHH
Confidence 12346899999998888877643 2589999999999987741 11111111 11235678999999999
Q ss_pred HHHhcc----CCceeeecCCCccC
Q 005949 580 EMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~s 599 (668)
.++... .+.++++.+|..+|
T Consensus 247 ~L~s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 247 FLASPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp HHHSGGGTTCCSCEEEESTTSSCC
T ss_pred HHhCCCcCCccCcEEEECCCcccC
Confidence 998643 46799998876543
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.6e-17 Score=157.84 Aligned_cols=198 Identities=13% Similarity=0.192 Sum_probs=142.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|||
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 87 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVN 87 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999854 34568999999988888754 7899999
Q ss_pred cccccCCCCc-----cccccccccceehhhhhhHHHHHHHHHc-----------CCcEEEEecceeEeecCCCCCCCCCC
Q 005949 438 AAGVTGRPNV-----DWCESHKTDTIRTNVAGTLTLADVCRDH-----------GILMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 438 ~a~~~~~~~~-----~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----------~~~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
+||....... ....++....+++|+.|+.++++++... +.++|++||...+.+
T Consensus 88 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~----------- 156 (257)
T 3tpc_A 88 CAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG----------- 156 (257)
T ss_dssp CCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-----------
T ss_pred CCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC-----------
Confidence 9997621111 1223455677899999999999999764 236888888766532
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcc-cceeecCCCcccHhhHH
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRY-NKVVNIPNSMTVLDELL 575 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~-~~~~~~~~~~~~v~D~a 575 (668)
.++.+.|+.||...+.+.+.+.. ..++++..++|+.+..+.. +....... .........+...+|+|
T Consensus 157 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva 229 (257)
T 3tpc_A 157 -------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYA 229 (257)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHH
T ss_pred -------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 12346899999999998877643 2689999999999988742 11111100 01111124577899999
Q ss_pred HHHHHHHhcc--CCceeeecCCCccC
Q 005949 576 PISIEMAKRN--LRGIWNFTNPGVVS 599 (668)
Q Consensus 576 ~~~~~~~~~~--~~g~~ni~~~~~~s 599 (668)
++++.++... .+.++++.+|..++
T Consensus 230 ~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 230 ALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHHHHHcccCCcCCcEEEECCCccCC
Confidence 9999999765 46789988876554
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7.2e-17 Score=158.25 Aligned_cols=192 Identities=16% Similarity=0.056 Sum_probs=139.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++|. ++.+|++|++++.++++.. ++|
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD 87 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999998642 3457899998888887754 689
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||...... .+....+....+++|+.++.++++++... ..++|++||...+
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~------------------ 149 (261)
T 1gee_A 88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------------------ 149 (261)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc------------------
Confidence 9999999762111 12233455678899999999998887653 3478888886543
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H------HHHhhcccceeecCCCcccHhhHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------ITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
.+.++.+.|+.||...|.+++.+.. ..++++.+++|+.++++.. + ...+... .....+.+.+|+|
T Consensus 150 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva 225 (261)
T 1gee_A 150 IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM----IPMGYIGEPEEIA 225 (261)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT----CTTSSCBCHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc----CCCCCCcCHHHHH
Confidence 1223457899999999988877643 2489999999999999852 1 1111110 0113578899999
Q ss_pred HHHHHHHhcc----CCceeeecCCCc
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
++++.++... .+.++++.++..
T Consensus 226 ~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 226 AVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCccccCCCCcEEEEcCCcc
Confidence 9999998643 356888888754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4e-17 Score=159.74 Aligned_cols=196 Identities=11% Similarity=-0.012 Sum_probs=142.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 94 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDI 94 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999865 23457899998888877754 6899
Q ss_pred EEEcccccC--CCCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||... .+..+...++....+++|+.++.++++++. +.+. ++|++||...|..
T Consensus 95 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 157 (260)
T 2zat_A 95 LVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP----------------- 157 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------------
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-----------------
Confidence 999999651 011122334456788999999999999875 3444 7888888766521
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc------ceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN------KVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~v~D~a~~~ 578 (668)
.++.+.|+.||...|.+.+.+.. ..++++..++|+.+..+..- ...... ........+.+.+|+|+++
T Consensus 158 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v 234 (260)
T 2zat_A 158 -FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ--VLWMDKARKEYMKESLRIRRLGNPEDCAGIV 234 (260)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH--HHHSSHHHHHHHHHHHTCSSCBCGGGGHHHH
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch--hcccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 12346899999999999888643 24899999999998877421 100000 0001123578899999999
Q ss_pred HHHHhcc----CCceeeecCCCccC
Q 005949 579 IEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~~s 599 (668)
..++..+ .+.+|++.+|..+|
T Consensus 235 ~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 235 SFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHcCcccCCccCCEEEECCCcccc
Confidence 9998754 45699999987765
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=9.4e-17 Score=159.00 Aligned_cols=198 Identities=14% Similarity=0.098 Sum_probs=144.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------------ccccccCChhHHHHHh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------------YGKGRLEDCSSLIADV 427 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------------~~~~D~~d~~~~~~~l 427 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|++++++++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 5799999999999999999999998653 2356999999988888
Q ss_pred hhc-----CCCEEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCC
Q 005949 428 QSV-----KPTHVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPE 496 (668)
Q Consensus 428 ~~~-----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~ 496 (668)
+.. ++|+|||+||..... ..+...++....+++|+.|+.++++++. +.+ .++|++||...+.+
T Consensus 91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------ 164 (281)
T 3s55_A 91 AEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA------ 164 (281)
T ss_dssp HHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC------
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC------
Confidence 765 789999999977211 1123345556788899999999999963 333 47888888765521
Q ss_pred CCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh---HHHH-----hhccc------
Q 005949 497 GSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN---FITK-----ISRYN------ 559 (668)
Q Consensus 497 ~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~---~~~~-----~~~~~------ 559 (668)
.++...|+.||...+.+.+.+.. ..++++..++|+.+++|.. +... .....
T Consensus 165 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (281)
T 3s55_A 165 ------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES 232 (281)
T ss_dssp ------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred ------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence 22346899999999999887643 3589999999999998852 1100 00000
Q ss_pred ---ceeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCCccC
Q 005949 560 ---KVVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 560 ---~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
.....+..+.+.+|+|++++.++... .+.+|++.+|...+
T Consensus 233 ~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 233 VFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred HHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 00112356889999999999999754 36799999986654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-17 Score=163.84 Aligned_cols=207 Identities=12% Similarity=0.104 Sum_probs=148.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc------------------------------------cccccCChhHHHHHh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY------------------------------------GKGRLEDCSSLIADV 427 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~------------------------------------~~~D~~d~~~~~~~l 427 (668)
++++||||+|+||+++++.|+++|++|.+ +.+|++|++++.+++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 47999999999999999999999987632 457999999988887
Q ss_pred hhc-----CCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCC
Q 005949 428 QSV-----KPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSG 499 (668)
Q Consensus 428 ~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~ 499 (668)
+.. ++|+|||+||..... .....++....+++|+.|+.++++++..+ +.++|++||...+......+
T Consensus 91 ~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~---- 165 (287)
T 3pxx_A 91 ANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP---- 165 (287)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC----
T ss_pred HHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc----
Confidence 754 789999999987211 12334566778999999999999999875 34788888887665443332
Q ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh----HHHHhhcc-------------c
Q 005949 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN----FITKISRY-------------N 559 (668)
Q Consensus 500 ~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~----~~~~~~~~-------------~ 559 (668)
..+..+.++...|+.||...+.+.+.+... .++++..++|+.+..+.. ........ .
T Consensus 166 ---~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (287)
T 3pxx_A 166 ---GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242 (287)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGG
T ss_pred ---cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhh
Confidence 233333344567999999999998886433 489999999999988752 11111100 0
Q ss_pred ceeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCCcc
Q 005949 560 KVVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 560 ~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
.....+..+.+.+|+|++++.++... .+.++++.+|..+
T Consensus 243 ~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~ 285 (287)
T 3pxx_A 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285 (287)
T ss_dssp GGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence 01112356788999999999998643 4678999887654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=156.09 Aligned_cols=193 Identities=15% Similarity=0.095 Sum_probs=140.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|||
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVN 87 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999865 23568999999988888754 6899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... .+...++....+++|+.|+.++++++ ++.+. ++|++||...+.+ .++
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~ 149 (260)
T 1nff_A 88 NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG------------------TVA 149 (260)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------------CTT
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC------------------CCC
Confidence 999762111 11233455678899999997766665 44454 7888888765521 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccceeecC-CCcccHhhHHHHHHHHHhcc--
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIP-NSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~D~a~~~~~~~~~~-- 585 (668)
...|+.||...|.+.+.+.. ..++++..++|+.++++..- . ........+ ..+.+.+|+|++++.++...
T Consensus 150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~-~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~ 225 (260)
T 1nff_A 150 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD---W-VPEDIFQTALGRAAEPVEVSNLVVYLASDESS 225 (260)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT---T-SCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc---c-chhhHHhCccCCCCCHHHHHHHHHHHhCcccc
Confidence 36899999999999887643 25899999999999988531 1 111100111 25678999999999998653
Q ss_pred --CCceeeecCCCcc
Q 005949 586 --LRGIWNFTNPGVV 598 (668)
Q Consensus 586 --~~g~~ni~~~~~~ 598 (668)
.+.+|++.++...
T Consensus 226 ~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 226 YSTGAEFVVDGGTVA 240 (260)
T ss_dssp TCCSCEEEESTTGGG
T ss_pred CCcCCEEEECCCeec
Confidence 3568999887544
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-17 Score=159.55 Aligned_cols=190 Identities=14% Similarity=0.084 Sum_probs=137.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999864 23457899999988888754 689
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... .+....+....+++|+.++.++++++ ++.+. ++|++||...+.+.
T Consensus 88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 151 (248)
T 2pnf_A 88 ILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN---------------- 151 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC----------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC----------------
Confidence 9999999762111 12233455678899999997777665 34555 77788886544221
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H----HHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F----ITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~----~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
++...|+.+|...|.+.+.+.. ..++++.+++|+.++++.. + ...+... .....+.+.+|+|+++
T Consensus 152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~~ 225 (248)
T 2pnf_A 152 --VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQ----IPLGRFGSPEEVANVV 225 (248)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHT----CTTSSCBCHHHHHHHH
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhc----CCCCCccCHHHHHHHH
Confidence 2236799999999998887643 3479999999999998852 1 1111111 1123578899999999
Q ss_pred HHHHhcc----CCceeeecCC
Q 005949 579 IEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~ 595 (668)
+.++... .+.+|++.++
T Consensus 226 ~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 226 LFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCchhhcCCCcEEEeCCC
Confidence 9998653 3668999876
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=4.3e-17 Score=159.02 Aligned_cols=197 Identities=13% Similarity=0.112 Sum_probs=141.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------ccccccCChhHHHHHhhhc-----CCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------YGKGRLEDCSSLIADVQSV-----KPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~ 440 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|+++++++++.. ++|+|||+||
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag 86 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAA 86 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5799999999999999999999998762 3467999998888887754 7899999999
Q ss_pred ccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 441 VTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
...... .+...++....+++|+.++.++++++.. .+. ++|++||...+.+ .++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------------~~~~~~ 148 (256)
T 2d1y_A 87 IAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA------------------EQENAA 148 (256)
T ss_dssp CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB------------------CTTBHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC------------------CCCChh
Confidence 762111 1122334567889999999999998854 343 7888888764421 123468
Q ss_pred chhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHh----hccccee------ecCCCcccHhhHHHHHHHH
Q 005949 515 YSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKI----SRYNKVV------NIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~----~~~~~~~------~~~~~~~~v~D~a~~~~~~ 581 (668)
|+.||...|.+.+.+.. ..++++..++|+.+..+.. ... ....... .....+.+.+|+|++++.+
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l 226 (256)
T 2d1y_A 149 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL 226 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh--hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999887643 2589999999999987741 111 1000000 0113578899999999999
Q ss_pred Hhcc----CCceeeecCCCccCH
Q 005949 582 AKRN----LRGIWNFTNPGVVSH 600 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~~~~s~ 600 (668)
+... .+.+|++.++...++
T Consensus 227 ~s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 227 ASEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp HSGGGTTCCSCEEEESTTGGGBC
T ss_pred hCchhcCCCCCEEEECCCccccc
Confidence 8754 356899999866544
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=155.66 Aligned_cols=194 Identities=15% Similarity=0.101 Sum_probs=143.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999999999999854 34568999999988887754 789
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+...++....+++|+.++.++++++..+ + .++|++||...+. .
T Consensus 91 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------------~ 153 (262)
T 3pk0_A 91 VVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI-----------------T 153 (262)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT-----------------B
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc-----------------C
Confidence 99999997621 1112234455667899999999999998764 4 4788888865320 0
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+.++...|+.||...+.+.+.+... .++++..++|+.++++.. +...+.+.. ....+...+|+|+++
T Consensus 154 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~----p~~r~~~p~dva~~v 229 (262)
T 3pk0_A 154 GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSI----PAGALGTPEDIGHLA 229 (262)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTS----TTSSCBCHHHHHHHH
T ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 1223468999999999999887533 589999999999998842 222222111 112466789999999
Q ss_pred HHHHhcc----CCceeeecCCCcc
Q 005949 579 IEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~~ 598 (668)
++++... .+.++++.+|..+
T Consensus 230 ~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 230 AFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHhCccccCCcCCEEEECCCeec
Confidence 9998653 4668999887554
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-16 Score=156.34 Aligned_cols=194 Identities=13% Similarity=0.118 Sum_probs=142.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~----~~d~Vi 436 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++.+.. ++|+||
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv 111 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLV 111 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEE
Confidence 579999999999999999999999864 34568999998887764432 689999
Q ss_pred EcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||....... +...++....+++|+.|+.++++++. +.+. ++|++||...+.+ .+
T Consensus 112 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~------------------~~ 173 (273)
T 3uf0_A 112 NNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG------------------GR 173 (273)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------------CS
T ss_pred ECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC------------------CC
Confidence 99997721111 22344556788999999999999883 3343 7888888765521 22
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
+...|+.||...+.+.+.+.. ..++++..++|+.+..+..- ...+... .....+...+|+|++++
T Consensus 174 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~p~~r~~~pedva~~v~ 249 (273)
T 3uf0_A 174 NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITAR----IPAGRWATPEDMVGPAV 249 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHH----STTSSCBCGGGGHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhc----CCCCCCCCHHHHHHHHH
Confidence 346899999999999888643 26899999999999987521 1111111 11235678999999999
Q ss_pred HHHhcc----CCceeeecCCCccC
Q 005949 580 EMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~s 599 (668)
.++... .+.++++.+|..+|
T Consensus 250 ~L~s~~a~~itG~~i~vdGG~~~s 273 (273)
T 3uf0_A 250 FLASDAASYVHGQVLAVDGGWLAS 273 (273)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHhCchhcCCcCCEEEECcCccCC
Confidence 998753 46789998876543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.2e-17 Score=157.80 Aligned_cols=191 Identities=15% Similarity=0.169 Sum_probs=117.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 89 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDY 89 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999854 35678999999988888765 7899
Q ss_pred EEEcccccCCCC----ccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN----VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 435 Vih~a~~~~~~~----~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|||+||..+... .....++....+++|+.++.++.+++. +.+. ++|++||...|.
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 153 (253)
T 3qiv_A 90 LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---------------- 153 (253)
T ss_dssp EEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred EEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC----------------
Confidence 999999741001 112334556788999999777776653 3443 788888877651
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
+.+.|+.||...|.+++.+.. ..++++..++|+.++++.. +...+.+..+ ...+...+|+|
T Consensus 154 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva 224 (253)
T 3qiv_A 154 -----YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLP----LSRMGTPDDLV 224 (253)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------CCHHH
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCC----CCCCCCHHHHH
Confidence 125699999999998887643 2489999999999988742 1111111111 12345689999
Q ss_pred HHHHHHHhcc----CCceeeecCCCccC
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++++.++... .+++|++.+|..++
T Consensus 225 ~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 225 GMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp HHHHHHHSGGGTTCCSCEEEC-------
T ss_pred HHHHHHcCccccCCCCCEEEECCCeecC
Confidence 9999998653 46799999886653
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=156.09 Aligned_cols=193 Identities=11% Similarity=0.037 Sum_probs=142.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLD 84 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999864 24567999999998888776 789
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+...++....+++|+.|+.++++++.. .+ .++|++||...+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------ 146 (258)
T 3oid_A 85 VFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR------------------ 146 (258)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS------------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC------------------
Confidence 99999996521 111223344556789999999999999843 33 3788888876542
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~ 576 (668)
+.++.+.|+.||...+.+.+.+.. ..++++..+.|+.+..+.. +...+... .....+...+|+|+
T Consensus 147 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~p~~r~~~~~dva~ 222 (258)
T 3oid_A 147 YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQN----TPAGRMVEIKDMVD 222 (258)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHH----CTTSSCBCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhc----CCCCCCcCHHHHHH
Confidence 123347899999999999887643 3479999999999987741 11111111 11235778999999
Q ss_pred HHHHHHhcc----CCceeeecCCCcc
Q 005949 577 ISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
+++.++... .+.++++.+|...
T Consensus 223 ~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 223 TVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp HHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred HHHHHhCcccCCccCCEEEECCCccC
Confidence 999999753 4678999887543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=7.2e-17 Score=160.14 Aligned_cols=191 Identities=14% Similarity=0.102 Sum_probs=137.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~ 124 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 124 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 579999999999999999999999854 23557999999988887653 6899
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||..... ..+....+....+++|+.|+.++++++. +.+. ++|++||...+.+.
T Consensus 125 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------- 187 (285)
T 2c07_A 125 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------------- 187 (285)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------------
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------------
Confidence 99999976211 1122344566788999999888888875 3454 78888887655221
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
++...|+.||...|.+++.+.. ..++++.+++|+.+.++.. +...+... .....+.+.+|+|++++
T Consensus 188 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~dvA~~~~ 262 (285)
T 2c07_A 188 -VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN----IPAGRMGTPEEVANLAC 262 (285)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT----CTTSSCBCHHHHHHHHH
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhh----CCCCCCCCHHHHHHHHH
Confidence 2236799999999998877643 2489999999999988741 11111111 11135788999999999
Q ss_pred HHHhcc----CCceeeecCCC
Q 005949 580 EMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~ 596 (668)
.++... .+.+|++.+|.
T Consensus 263 ~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 263 FLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCCCCCEEEeCCCc
Confidence 998753 45688888764
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-17 Score=158.35 Aligned_cols=197 Identities=14% Similarity=0.122 Sum_probs=142.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+|||
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 107 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVN 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999864 34678999999988888765 7899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... .....++....+++|+.|+.++++++.. .+. ++|++||...+. +.++
T Consensus 108 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~ 169 (277)
T 4dqx_A 108 NAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS------------------AIAD 169 (277)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS------------------CCTT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc------------------CCCC
Confidence 999762111 1223344556788999999999998853 333 788888876542 1233
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc---------eeecCCCcccHhhHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK---------VVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~v~D~a~~~~ 579 (668)
.+.|+.||...+.+.+.+.. ..++++..++|+.+..+... ........ .......+...+|+|++++
T Consensus 170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~ 248 (277)
T 4dqx_A 170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT-KIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAML 248 (277)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-HHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh-hhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHH
Confidence 46899999999999887643 34799999999999887411 11100000 0011224667999999999
Q ss_pred HHHhcc----CCceeeecCCCccC
Q 005949 580 EMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~s 599 (668)
.++... .+.++++.+|..++
T Consensus 249 ~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 249 FLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHHSGGGTTCCSCEEEESSSSSSC
T ss_pred HHhCCccCCCcCCEEEECCchhhh
Confidence 998653 46789999886654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-17 Score=160.69 Aligned_cols=197 Identities=11% Similarity=0.003 Sum_probs=143.1
Q ss_pred cEEEEEcCC--cchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRT--GWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~--G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+ |+||+++++.|+++|++|. ++.+|++|+++++++++.. ++|
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 88 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLD 88 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999 9999999999999998652 3457999999888887754 679
Q ss_pred EEEEcccccCC-----CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-----PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 434 ~Vih~a~~~~~-----~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
+|||+||.... +..+...++....+++|+.++.++++++... +.++|++||...+..
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------- 153 (261)
T 2wyu_A 89 YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV--------------- 153 (261)
T ss_dssp EEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---------------
T ss_pred EEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC---------------
Confidence 99999997620 1112234456678899999999999999775 347888888654421
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
.++...|+.||...|.+++.+... .++++..++|+.++++.. +...+.... ....+.+.+|+
T Consensus 154 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~dv 226 (261)
T 2wyu_A 154 ---VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTA----PLRRNITQEEV 226 (261)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHS----TTSSCCCHHHH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcC----CCCCCCCHHHH
Confidence 123367999999999998886432 489999999999998742 111111111 11246679999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccCHHH
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s~~e 602 (668)
|++++.++... .+.+|++.++..++..|
T Consensus 227 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 227 GNLGLFLLSPLASGITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred HHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence 99999998643 36689999886655433
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.1e-18 Score=171.28 Aligned_cols=177 Identities=15% Similarity=0.100 Sum_probs=124.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCC-----CEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPE-----YKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
+|||+||||+||||++++..|+++++. .+|+++|+............+.....+.++ +|+.+.+.+.+++ .+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~--~~ 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAF--KD 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHT--TT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHh--CC
Confidence 469999999999999999999987431 389999885310001100000001112222 5776666667777 68
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCcc-ccCCCCCCcCCCCCCCC-CCCCCC
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDE-VYGETDEDAVVGNHEAS-QLLPTN 157 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~-vyg~~~~~~~~~~~e~~-~~~p~~ 157 (668)
+|+|||+||..... ..++.++++.|+.++.++++++++.+ .-.+++++|+.. +.... . .+.. ...|.+
T Consensus 81 ~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~----~---~~~~~~~~p~~ 151 (327)
T 1y7t_A 81 ADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALI----A---YKNAPGLNPRN 151 (327)
T ss_dssp CSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH----H---HHTCTTSCGGG
T ss_pred CCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHH----H---HHHcCCCChhh
Confidence 99999999986532 35677899999999999999999974 334778777632 11000 0 1111 244667
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCC
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~ 194 (668)
+|+.+|...|++...+++.++++.+++|+++||||.+
T Consensus 152 ~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 152 FTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp EEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred eeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 8999999999999999888899999999999999976
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-15 Score=151.39 Aligned_cols=227 Identities=15% Similarity=0.031 Sum_probs=147.1
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHHhCCCCEEEEEcCCC---------ccCCccccCCCcCC---CCeEEEEcc----
Q 005949 4 YTPKNILITGAA--GFIASHVCNRLIRNYPEYKIVVLDKLD---------YCSNLKNLIPSKAS---SNFKFVKGD---- 65 (668)
Q Consensus 4 ~~~~~vLVtGgt--G~iG~~l~~~L~~~g~~~~v~~~~r~~---------~~~~~~~~~~~~~~---~~~~~~~~D---- 65 (668)
+++|++|||||+ |+||+++++.|+++ +++|++++|.. ....++.+...... .....+.+|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence 457899999999 99999999999999 67888876421 00111111100000 012333443
Q ss_pred ----CC----C--------HHHHHHHhc----c-CCCCEEEEcCccCC------cccccCChHHHHHHHHHHHHHHHHHH
Q 005949 66 ----IA----S--------ADLVNFLLI----T-ESIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEAC 118 (668)
Q Consensus 66 ----l~----d--------~~~~~~~~~----~-~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~ 118 (668)
+. | .+.+.+++. . .++|+|||+||... .....+++...+++|+.++.++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 22 1 233333332 1 37999999998532 12233456678999999999999998
Q ss_pred HHcC-CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeCC
Q 005949 119 KVTG-QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPT-NPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGP 192 (668)
Q Consensus 119 ~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~ 192 (668)
...- .-.++|++||...+.... .. ..|+.+|...+.+.+.++.+ +++++.+++||.|.++
T Consensus 164 ~~~m~~~g~iv~isS~~~~~~~~--------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~ 229 (297)
T 1d7o_A 164 LPIMNPGGASISLTYIASERIIP--------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR 229 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCT--------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred HHHhccCceEEEEeccccccCCC--------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccc
Confidence 7531 125899999977654321 12 36999999999999987754 5899999999999998
Q ss_pred CCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 193 NQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
........+.+........++ ..+...+|+|++++.++... ..|+.+++.+|..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~ 286 (297)
T 1d7o_A 230 AAKAIGFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp CSSCCSHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred hhhhccccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence 754322333333332222111 13568999999999888642 2577899987753
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.4e-16 Score=153.32 Aligned_cols=205 Identities=17% Similarity=0.208 Sum_probs=144.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---------CcCCCCeEEEEccCCCHHHHHH
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---------SKASSNFKFVKGDIASADLVNF 74 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~ 74 (668)
+++|++|||||+|+||+++++.|+++ +++|++.+|.... ...+.. .....++.++.+|++|.+++.+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVA--NPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSC--CTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchh--hhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 56789999999999999999999999 6789999886432 111100 0113468899999999999888
Q ss_pred Hhcc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCC
Q 005949 75 LLIT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 75 ~~~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~ 142 (668)
++.. .++|+|||+||..... ...+++...+++|+.++.++.+++... ....++|++||...+....
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-- 157 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-- 157 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH--
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC--
Confidence 7743 3799999999975432 223345678899999999999887531 1257999999976654310
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
..+...|+.+|...+.+.+.++.++ ++++..+.||.+..... . .. ..+.
T Consensus 158 ----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~-----~----~~-~~~~-------- 209 (274)
T 3e03_A 158 ----------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA-----I----NM-LPGV-------- 209 (274)
T ss_dssp ----------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------CC--------
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch-----h----hh-cccc--------
Confidence 0123469999999999999887653 89999999995432211 1 00 1111
Q ss_pred CceEeceeHHHHHHHHHHHHhcCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
....+...+|+|++++.++....
T Consensus 210 -~~~~~~~pedvA~~v~~l~s~~~ 232 (274)
T 3e03_A 210 -DAAACRRPEIMADAAHAVLTREA 232 (274)
T ss_dssp -CGGGSBCTHHHHHHHHHHHTSCC
T ss_pred -cccccCCHHHHHHHHHHHhCccc
Confidence 11125689999999999987543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.9e-17 Score=157.36 Aligned_cols=193 Identities=13% Similarity=0.047 Sum_probs=142.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI 85 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999854 34668999999998888765 6899
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||....... +...++....+++|+.++.++++++.. .+ .+++++||...+.+
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 147 (247)
T 3lyl_A 86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG------------------ 147 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------------
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC------------------
Confidence 9999997721111 223455667889999999999998754 23 37888888765522
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.+..+.|+.||...+.+++.+.. ..++++..++|+.+..+.. ....+... .....+.+.+|+|++++
T Consensus 148 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~i~ 223 (247)
T 3lyl_A 148 NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATK----IPSGQIGEPKDIAAAVA 223 (247)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTT----STTCCCBCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhc----CCCCCCcCHHHHHHHHH
Confidence 12346899999988888877643 3589999999998887641 11111111 11235778999999999
Q ss_pred HHHhcc----CCceeeecCCCcc
Q 005949 580 EMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~ 598 (668)
.++... .+.+|++.+|..+
T Consensus 224 ~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 224 FLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHhCCCcCCccCCEEEECCCEec
Confidence 998653 4679999887554
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=155.21 Aligned_cols=197 Identities=11% Similarity=0.063 Sum_probs=138.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc-------------cccccCChhHHHHHhhhc-----CCCEEEEcccccCC-
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------------GKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGR- 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------------~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~- 444 (668)
++|+||||+|+||+++++.|+++|++|.. +.+|++|+++++++++.. ++|+|||+||....
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~ 95 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADA 95 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC--
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 57999999999999999999999997633 467999999888887754 68999999997621
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
+..+...++....+++|+.++.++++++.. .+. ++|++||...+.+ .+....|+.||
T Consensus 96 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~Y~~sK 157 (247)
T 1uzm_A 96 FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG------------------IGNQANYAASK 157 (247)
T ss_dssp ---CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------CCHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC------------------CCCChhHHHHH
Confidence 011223455677889999999999998854 343 7888888765422 12236799999
Q ss_pred HHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc----CCcee
Q 005949 520 AMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN----LRGIW 590 (668)
Q Consensus 520 ~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ 590 (668)
...|.+.+.+.. ..++++..++|+.+..+.. +................+.+.+|+|++++.++... .+.++
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i 237 (247)
T 1uzm_A 158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI 237 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEE
Confidence 999988877642 2589999999999987741 10000000000001134778999999999998653 45688
Q ss_pred eecCCCcc
Q 005949 591 NFTNPGVV 598 (668)
Q Consensus 591 ni~~~~~~ 598 (668)
++.+|...
T Consensus 238 ~vdgG~~~ 245 (247)
T 1uzm_A 238 PVDGGMGM 245 (247)
T ss_dssp EESTTTTC
T ss_pred EECCCccc
Confidence 88887543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-16 Score=155.19 Aligned_cols=195 Identities=14% Similarity=0.131 Sum_probs=134.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------ccccccCChhHHHHHhhhc-----CCCEEEEcccccCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------YGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGR 444 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~ 444 (668)
++++||||+|+||+++++.|+++|++|. .+.+|++|++++.++++.. ++|+|||+||....
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~ 87 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRM 87 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence 5799999999999999999999998763 3457999999988888754 68999999997621
Q ss_pred -CCccccccccccceehhhhhhHHHHHHH----HHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 445 -PNVDWCESHKTDTIRTNVAGTLTLADVC----RDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 445 -~~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
+..+...++....+++|+.++.++++++ ++.+ .++|++||...+. +.++.+.|+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------------~~~~~~~Y~~s 149 (250)
T 2fwm_X 88 GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT------------------PRIGMSAYGAS 149 (250)
T ss_dssp CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------------------CCTTCHHHHHH
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC------------------CCCCCchHHHH
Confidence 1112234556778899999999999998 3444 4788888876541 12334689999
Q ss_pred HHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH-H-Hhhccccee--------ecC-CCcccHhhHHHHHHHHH
Q 005949 519 KAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI-T-KISRYNKVV--------NIP-NSMTVLDELLPISIEMA 582 (668)
Q Consensus 519 K~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~-~-~~~~~~~~~--------~~~-~~~~~v~D~a~~~~~~~ 582 (668)
|...|.+.+.+.. ..++++..++|+.++++.. .. . .... .... ..+ ..+...+|+|++++.++
T Consensus 150 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 228 (250)
T 2fwm_X 150 KAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEE-QRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228 (250)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHH-HHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence 9999999888643 2589999999999988742 10 0 0000 0000 011 24667899999999998
Q ss_pred hcc----CCceeeecCCCc
Q 005949 583 KRN----LRGIWNFTNPGV 597 (668)
Q Consensus 583 ~~~----~~g~~ni~~~~~ 597 (668)
... .+.++++.+|..
T Consensus 229 s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 229 SDLASHITLQDIVVDGGST 247 (250)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred CccccCCCCCEEEECCCcc
Confidence 753 456888887754
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-17 Score=159.67 Aligned_cols=214 Identities=14% Similarity=0.084 Sum_probs=145.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHH---hCCCCEEEEEcCCCccCCccccCCCc----CCCCeEEEEccCCCHHHHHHH
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIR---NYPEYKIVVLDKLDYCSNLKNLIPSK----ASSNFKFVKGDIASADLVNFL 75 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~---~g~~~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~ 75 (668)
.+++|++|||||+|+||+++++.|++ + +++|++++|... .+..+.... ...++.++.+|++|.+.+.++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSES--MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL 78 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHH--HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHH--HHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence 45678999999999999999999998 6 789999988642 111111110 134588999999999988877
Q ss_pred hcc-------CCCC--EEEEcCccCCc--c-----cccCChHHHHHHHHHHHHHHHHHHHHcC-----CCcEEEEEcCcc
Q 005949 76 LIT-------ESID--TIMHFAAQTHV--D-----NSFGNSFEFTKNNIYGTHVLLEACKVTG-----QIRRFIHVSTDE 134 (668)
Q Consensus 76 ~~~-------~~~d--~Vih~a~~~~~--~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~v~~SS~~ 134 (668)
+.. .++| +|||+||.... . ...+++...+++|+.++.++++++...- ...++|++||..
T Consensus 79 ~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~ 158 (259)
T 1oaa_A 79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence 632 2578 99999997532 1 2334566789999999999999886531 236799999987
Q ss_pred ccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCC-
Q 005949 135 VYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLP- 212 (668)
Q Consensus 135 vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~- 212 (668)
.+.+.. +...|+.+|...+.+.+.++.+. ++++..+.||.+-.+. ...+.... ....
T Consensus 159 ~~~~~~--------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~------~~~~~~~~-~~~~~ 217 (259)
T 1oaa_A 159 ALQPYK--------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM------QQLARETS-KDPEL 217 (259)
T ss_dssp GTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH------HHHHHHHC-SCHHH
T ss_pred hcCCCC--------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch------HHHHhhcc-CChhH
Confidence 764322 24579999999999999988775 4788888888876542 11111000 0000
Q ss_pred ceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 213 LPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 213 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
............+...+|+|++++.++..
T Consensus 218 ~~~~~~~~p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 218 RSKLQKLKSDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence 00000000011357899999999988874
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.8e-17 Score=158.11 Aligned_cols=191 Identities=16% Similarity=0.082 Sum_probs=135.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+|||
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 107 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVN 107 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999854 45678999999988887754 6899999
Q ss_pred cccccCCC-CccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||..... ..+...++....+++|+.|+.++.+++. +.+. ++|++||...+.+ .++
T Consensus 108 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~------------------~~~ 169 (266)
T 3grp_A 108 NAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG------------------NPG 169 (266)
T ss_dssp CCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------------C
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC------------------CCC
Confidence 99976211 1122345567788999999777777663 3443 7888888765522 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.+.|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....+.... ....+...+|+|++++.++
T Consensus 170 ~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~----p~~r~~~~edvA~~v~~L~ 245 (266)
T 3grp_A 170 QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMI----PMKRMGIGEEIAFATVYLA 245 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTC----TTCSCBCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcC----CCCCCcCHHHHHHHHHHHh
Confidence 46899999998888877643 3589999999999988741 111122111 1234667899999999998
Q ss_pred hcc----CCceeeecCCC
Q 005949 583 KRN----LRGIWNFTNPG 596 (668)
Q Consensus 583 ~~~----~~g~~ni~~~~ 596 (668)
... .+.++++.+|.
T Consensus 246 s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 246 SDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp SGGGTTCCSCEEEESTTC
T ss_pred CccccCccCCEEEECCCe
Confidence 653 46688888764
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.6e-17 Score=160.95 Aligned_cols=205 Identities=14% Similarity=0.019 Sum_probs=141.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-CCCEEEEcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGV 441 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~ 441 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.+ ++|+|||+||.
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~ 96 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGI 96 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcC
Confidence 579999999999999999999999854 45668999999999999876 78999999998
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
.. +......++....+++|+.|+.++++++..... ++|++||...+.+..... ....+..+.++...|+.||.
T Consensus 97 ~~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~-----~~~~~~~~~~~~~~Y~~sK~ 170 (291)
T 3rd5_A 97 MA-VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE-----DLNWRSRRYSPWLAYSQSKL 170 (291)
T ss_dssp CS-CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS-----CTTCSSSCCCHHHHHHHHHH
T ss_pred CC-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc-----cccccccCCCCcchHHHHHH
Confidence 73 122334567778899999999999999988755 677888877664432211 12333344455678999999
Q ss_pred HHHHHHHhccCee---E--eEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-C-Cceee
Q 005949 521 MVEELLKEYDNVC---T--LRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN-L-RGIWN 591 (668)
Q Consensus 521 ~~E~~~~~~~~~~---~--l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~-~g~~n 591 (668)
..+.+++.+...+ + +++..+.|+.+..+.. +...............-....+|+|++++.++..+ . +..|+
T Consensus 171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~ 250 (291)
T 3rd5_A 171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVG 250 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCCCCCCceeC
Confidence 9999988764322 3 9999999988766531 11111000000111112335899999999998875 3 34555
Q ss_pred ecC
Q 005949 592 FTN 594 (668)
Q Consensus 592 i~~ 594 (668)
+.+
T Consensus 251 vdg 253 (291)
T 3rd5_A 251 PRF 253 (291)
T ss_dssp ETT
T ss_pred Ccc
Confidence 543
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-16 Score=157.12 Aligned_cols=219 Identities=14% Similarity=0.071 Sum_probs=146.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCH-HHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASA-DLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~-- 78 (668)
+++++||||||+|+||+++++.|+++ +++|++.+|..... ....+. .....++.++.+|++|. +.+..+++.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLK-NSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-TTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH-hcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 34689999999999999999999999 67999998864211 011111 11234689999999998 777666532
Q ss_pred ---CCCCEEEEcCccCCc----------------------------------ccccCChHHHHHHHHHHHHHHHHHHHHc
Q 005949 79 ---ESIDTIMHFAAQTHV----------------------------------DNSFGNSFEFTKNNIYGTHVLLEACKVT 121 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~----------------------------------~~~~~~~~~~~~~nv~~~~~l~~~~~~~ 121 (668)
.++|+|||+||.... ....+.....+++|+.|+.++++++...
T Consensus 87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence 379999999997632 1122334567899999999888876431
Q ss_pred ---CCCcEEEEEcCccccCCCCCCc----------------------------CCC-CCCCCCCCCCChhHHHHHHHHHH
Q 005949 122 ---GQIRRFIHVSTDEVYGETDEDA----------------------------VVG-NHEASQLLPTNPYSATKAGAEML 169 (668)
Q Consensus 122 ---~~~~~~v~~SS~~vyg~~~~~~----------------------------~~~-~~e~~~~~p~~~Y~~sK~~~E~~ 169 (668)
....++|++||...+....... ... ........+...|+.+|.+.+.+
T Consensus 167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~ 246 (311)
T 3o26_A 167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246 (311)
T ss_dssp HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence 2257999999976543321000 000 00111122345799999999999
Q ss_pred HHHHHHhc-CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC--CCc
Q 005949 170 VMAYGRSY-GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE--VGH 246 (668)
Q Consensus 170 ~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~--~~~ 246 (668)
.+.++.++ ++++..+.||.|..+..... .....++.++.++.++..+. .++
T Consensus 247 ~~~la~e~~~i~v~~v~PG~v~T~~~~~~--------------------------~~~~~~~~a~~~~~~~~~~~~~~~g 300 (311)
T 3o26_A 247 TRVLANKIPKFQVNCVCPGLVKTEMNYGI--------------------------GNYTAEEGAEHVVRIALFPDDGPSG 300 (311)
T ss_dssp HHHHHHHCTTSEEEEECCCSBCSGGGTTC--------------------------CSBCHHHHHHHHHHHHTCCSSCCCS
T ss_pred HHHHHhhcCCceEEEecCCceecCCcCCC--------------------------CCCCHHHHHHHHHHHHhCCCCCCCc
Confidence 99998875 69999999999987643110 11367788888887776543 334
Q ss_pred eEEEc
Q 005949 247 VYNVG 251 (668)
Q Consensus 247 ~~ni~ 251 (668)
.|...
T Consensus 301 ~~~~~ 305 (311)
T 3o26_A 301 FFYDC 305 (311)
T ss_dssp CEETC
T ss_pred eEecc
Confidence 44444
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=156.30 Aligned_cols=195 Identities=13% Similarity=0.043 Sum_probs=139.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~~~ 445 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+|||+||.....
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 88 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG 88 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 579999999999999999999999865 34568999999988887754 689999999976211
Q ss_pred C-ccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 446 N-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 446 ~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
. .+...++....+++|+.|+.++++++... + .++|++||...+.+ .++.+.|+.||
T Consensus 89 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~~Y~~sK 150 (264)
T 2dtx_A 89 KIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII------------------TKNASAYVTSK 150 (264)
T ss_dssp CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC------------------CTTBHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC------------------CCCchhHHHHH
Confidence 1 11234456678899999999999998653 3 47888888765421 12346899999
Q ss_pred HHHHHHHHhccCeeE--eEEeeeecCCCCChhh--HHH-----------HhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 520 AMVEELLKEYDNVCT--LRVRMPISSDLNNPRN--FIT-----------KISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 520 ~~~E~~~~~~~~~~~--l~~~~~r~~~~~g~~~--~~~-----------~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
...|.+.+.+..... +++..++|+.+..+.. +.. .....-........+.+.+|+|++++.++..
T Consensus 151 ~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 230 (264)
T 2dtx_A 151 HAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASR 230 (264)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999998887642221 8999999999987741 110 0000000001123578899999999999875
Q ss_pred c----CCceeeecCCC
Q 005949 585 N----LRGIWNFTNPG 596 (668)
Q Consensus 585 ~----~~g~~ni~~~~ 596 (668)
. .+.++++.++.
T Consensus 231 ~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 231 EASFITGTCLYVDGGL 246 (264)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhcCCCCcEEEECCCc
Confidence 3 35688888763
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=5e-17 Score=157.34 Aligned_cols=197 Identities=13% Similarity=0.134 Sum_probs=142.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHH-cCCcc--------------cccccccCChhHHHHHhhhc---CCCEEEEcccccCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEK-EGIPF--------------EYGKGRLEDCSSLIADVQSV---KPTHVFNAAGVTGR 444 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~-~g~~v--------------~~~~~D~~d~~~~~~~l~~~---~~d~Vih~a~~~~~ 444 (668)
|++++||||+|+||+++++.|++ .|+.| ..+.+|++|+++++++++.. ++|+|||+||....
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~ 83 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIK 83 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCC
Confidence 46799999999999999999999 77654 45678999999998888644 67999999997621
Q ss_pred -CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 445 -PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 445 -~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
+..+...++....+++|+.|+.++++++... +.++|++||...+.. .+....|+.||.
T Consensus 84 ~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------------~~~~~~Y~asKa 145 (244)
T 4e4y_A 84 GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA------------------KPNSFAYTLSKG 145 (244)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC------------------CTTBHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC------------------CCCCchhHHHHH
Confidence 1112234455678899999999999998765 236788888765421 223468999999
Q ss_pred HHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhh-----------cccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 521 MVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKIS-----------RYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 521 ~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~-----------~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
..+.+.+.+.. ..++++..++|+.+..+.. +..... ...........+...+|+|++++.++..
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 225 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcC
Confidence 99999888643 4589999999999998741 111100 0000001122567899999999999975
Q ss_pred c----CCceeeecCCCc
Q 005949 585 N----LRGIWNFTNPGV 597 (668)
Q Consensus 585 ~----~~g~~ni~~~~~ 597 (668)
. .++++++.+|..
T Consensus 226 ~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 226 KSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp GGTTCCSCEEEESTTGG
T ss_pred ccccccCCeEeECCCcc
Confidence 3 466888887643
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=158.59 Aligned_cols=194 Identities=14% Similarity=0.084 Sum_probs=142.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999854 24568999999988887765 789
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... .+...++....+++|+.|+.++++++. +.+ .++|++||...+. .
T Consensus 122 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~-----------------~ 184 (293)
T 3rih_A 122 VVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV-----------------T 184 (293)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT-----------------B
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc-----------------C
Confidence 9999999762111 122345566788999999999999983 444 4788888865320 0
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+.+..+.|+.||...+.+.+.+.. ..++++..++|+.++++.. +...+....+ ..-+...+|+|+++
T Consensus 185 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p----~~r~~~p~dvA~~v 260 (293)
T 3rih_A 185 GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIP----MGMLGSPVDIGHLA 260 (293)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTST----TSSCBCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCC----CCCCCCHHHHHHHH
Confidence 112346899999999999887643 2589999999999999852 2222222111 12355689999999
Q ss_pred HHHHhcc----CCceeeecCCCcc
Q 005949 579 IEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~~ 598 (668)
+.++... .+.++++.+|..+
T Consensus 261 ~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 261 AFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHhCccccCCCCCEEEECCCccC
Confidence 9998643 4678999887654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=156.47 Aligned_cols=195 Identities=16% Similarity=0.100 Sum_probs=139.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 102 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 479999999999999999999999864 23567999999888887754 6899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc------C-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH------G-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|||+||...... .+...++....+++|+.|+.++++++... + .++|++||...+.+
T Consensus 103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------- 166 (277)
T 2rhc_B 103 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG---------------- 166 (277)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC----------------
Confidence 999999762111 11223445678899999999999997654 4 37888888754311
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhc------cc--c-e--eecCCCccc
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR------YN--K-V--VNIPNSMTV 570 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~------~~--~-~--~~~~~~~~~ 570 (668)
.++...|+.||...|.+.+.+.. ..++++..++|+.+.++.. +...... .. . . ......+.+
T Consensus 167 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 244 (277)
T 2rhc_B 167 --VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQ 244 (277)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBC
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcC
Confidence 12346899999999998887642 3589999999999998741 1110000 00 0 0 011235788
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
.+|+|++++.++..+ .+.+|++.+|.
T Consensus 245 ~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 245 PSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 999999999998753 45688888763
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.9e-16 Score=156.20 Aligned_cols=196 Identities=15% Similarity=0.085 Sum_probs=143.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 129 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGL 129 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999854 34567999999888877754 78
Q ss_pred CEEEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 433 d~Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|+|||+||.... +..+...++....+++|+.|+.++++++... +.++|++||...+..
T Consensus 130 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~----------------- 192 (294)
T 3r3s_A 130 DILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP----------------- 192 (294)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-----------------
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-----------------
Confidence 999999997521 1112234555778999999999999999765 347888888776522
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccccee-----ecCCCcccHhhHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVV-----NIPNSMTVLDELLPISI 579 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~v~D~a~~~~ 579 (668)
.+....|+.||...+.+.+.+.. ..++++..++|+.++++...-.. ....... .....+...+|+|++++
T Consensus 193 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 270 (294)
T 3r3s_A 193 -SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQTPMKRAGQPAELAPVYV 270 (294)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT-SCGGGSTTTTTTSTTSSCBCGGGGHHHHH
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC-CCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 22346799999999999887643 24899999999999987521100 0000000 01124667899999999
Q ss_pred HHHhcc----CCceeeecCCCcc
Q 005949 580 EMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~~ 598 (668)
.++... .+.++++.+|..+
T Consensus 271 ~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 271 YLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp HHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHhCccccCCCCCEEEECCCccC
Confidence 998643 4679999988654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-16 Score=155.62 Aligned_cols=197 Identities=13% Similarity=0.065 Sum_probs=134.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.+ ++|
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 469999999999999999999999854 34567999999988888755 789
Q ss_pred EEEEcccccC---CCCccccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCC
Q 005949 434 HVFNAAGVTG---RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 434 ~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~ 502 (668)
+|||+||... .+..+...++....+++|+.|+.++++++... +.++|++||...+.+
T Consensus 110 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~------------ 177 (280)
T 4da9_A 110 CLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT------------ 177 (280)
T ss_dssp EEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------------
T ss_pred EEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC------------
Confidence 9999999731 11112234566778999999999999988653 237888888766522
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccce-eecCCCcccHhhHHH
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNKV-VNIPNSMTVLDELLP 576 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~-~~~~~~~~~v~D~a~ 576 (668)
.+....|+.||...+.+.+.+.. ..++++..++|+.+..+.. +.......... ......+...+|+|+
T Consensus 178 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 251 (280)
T 4da9_A 178 ------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGN 251 (280)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHHHHHH
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHH
Confidence 12336799999999998887643 3589999999999987742 11110000000 011124667999999
Q ss_pred HHHHHHhcc----CCceeeecCCCcc
Q 005949 577 ISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
+++.++... .+.++++.+|..+
T Consensus 252 ~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 252 IVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp HHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred HHHHHhCccccCCCCCEEEECCCccc
Confidence 999999754 4678999887543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.3e-17 Score=158.79 Aligned_cols=194 Identities=10% Similarity=0.037 Sum_probs=142.2
Q ss_pred cEEEEEcCC--cchhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRT--GWIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~--G~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+ |+||+++++.|+++|++|. ++.+|++|+++++++++.. ++|
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 89 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD 89 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 469999999 9999999999999998652 3457999999888887754 679
Q ss_pred EEEEcccccCC-----CCcc-ccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-----PNVD-WCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 434 ~Vih~a~~~~~-----~~~~-~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
+|||+||.... +..+ ...++....+++|+.++.++++++... +.++|++||...+..
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------------- 155 (265)
T 1qsg_A 90 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-------------- 155 (265)
T ss_dssp EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------------
T ss_pred EEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC--------------
Confidence 99999997620 0011 234456678899999999999999775 347888888655421
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhh
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDE 573 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D 573 (668)
.++.+.|+.||...|.+.+.+... .++++..++|+.++++.. +...+.... ....+.+.+|
T Consensus 156 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~d 227 (265)
T 1qsg_A 156 ----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT----PIRRTVTIED 227 (265)
T ss_dssp ----CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS----TTSSCCCHHH
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcC----CCCCCCCHHH
Confidence 123467999999999998876432 489999999999998741 111111111 1124678999
Q ss_pred HHHHHHHHHhcc----CCceeeecCCCccC
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
+|++++.++... .+.+|++.++..++
T Consensus 228 va~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 228 VGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 999999998653 35689999886543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-16 Score=156.43 Aligned_cols=195 Identities=15% Similarity=0.096 Sum_probs=138.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 479999999999999999999999854 23457999999988888754 78
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHH----HHcC-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVC----RDHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|+|||+||....... +...++....+++|+.|+.++++++ ++.+ .++|++||...+.+
T Consensus 106 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 169 (281)
T 3v2h_A 106 DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA---------------- 169 (281)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC----------------
Confidence 999999997621111 1234455678899999999999997 3344 37888888765421
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhc-----ccc-------eeecCCCcc
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR-----YNK-------VVNIPNSMT 569 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~-----~~~-------~~~~~~~~~ 569 (668)
.+..+.|+.||...+.+.+.+.. ..++++..++|+.+..+.. ....... ... .......+.
T Consensus 170 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 247 (281)
T 3v2h_A 170 --SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI 247 (281)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCB
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCcc
Confidence 12346899999999999887643 3589999999999988741 1111000 000 001123678
Q ss_pred cHhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 570 VLDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
+.+|+|++++.++... .+.++++.+|.
T Consensus 248 ~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 248 TVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp CHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 8999999999998653 46689988763
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9.6e-17 Score=159.39 Aligned_cols=195 Identities=18% Similarity=0.113 Sum_probs=143.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 127 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999854 34567999999988888755 789
Q ss_pred EEEEcccccCCCC--ccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN--VDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 434 ~Vih~a~~~~~~~--~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+|||+||...... .....++....+++|+.|+.++++++..+ +.++|++||...+.+.
T Consensus 128 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------------- 190 (291)
T 3ijr_A 128 ILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN----------------- 190 (291)
T ss_dssp EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC-----------------
T ss_pred EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC-----------------
Confidence 9999999762111 11234556778999999999999999874 3478888888766321
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc-----eeecCCCcccHhhHHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-----VVNIPNSMTVLDELLPISIE 580 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~v~D~a~~~~~ 580 (668)
+....|+.||...|.+.+.+.. ..++++..++|+.++.+.. ........ .......+...+|+|++++.
T Consensus 191 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 267 (291)
T 3ijr_A 191 -ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI--PSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVY 267 (291)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHH--HHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHH
T ss_pred -CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcc--cccCCHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence 2236799999999999888643 2489999999999998741 11111000 00112356789999999999
Q ss_pred HHhcc----CCceeeecCCCcc
Q 005949 581 MAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 581 ~~~~~----~~g~~ni~~~~~~ 598 (668)
++... .+.++++.+|..+
T Consensus 268 L~s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 268 LASSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp HHSGGGTTCCSCEEEESSSCCC
T ss_pred HhCCccCCCcCCEEEECCCccc
Confidence 98653 4668888887543
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=154.18 Aligned_cols=196 Identities=14% Similarity=0.087 Sum_probs=142.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 91 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDV 91 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 479999999999999999999999854 35678999999998888765 7899
Q ss_pred EEEcccccC--CCCccccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||... .+..+...++....+++|+.++.++++++.. .+.++|++||...+..
T Consensus 92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------ 153 (264)
T 3ucx_A 92 VINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS------------------ 153 (264)
T ss_dssp EEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC------------------
T ss_pred EEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC------------------
Confidence 999998641 1111233455667889999999999998753 3557888888765421
Q ss_pred CCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhh--HHHHhh-----------cccceeecCCCcccHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRN--FITKIS-----------RYNKVVNIPNSMTVLD 572 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~--~~~~~~-----------~~~~~~~~~~~~~~v~ 572 (668)
.+....|+.||...+.+.+.+... .++++..++|+.++++.. +..... ..-........+...+
T Consensus 154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 233 (264)
T 3ucx_A 154 QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED 233 (264)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHH
Confidence 223468999999999998876432 589999999999998852 211100 0000000112567899
Q ss_pred hHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|+|++++.++... .+.++++.+|..
T Consensus 234 dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 234 EVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 9999999998653 467899988754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.7e-17 Score=158.64 Aligned_cols=196 Identities=14% Similarity=0.099 Sum_probs=143.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+|||
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 109 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVA 109 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999865 34567999999988888765 7899999
Q ss_pred cccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||..... ..+...++....+++|+.|+.++++++.. .+ .++|++||...+. +.++
T Consensus 110 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~------------------~~~~ 171 (277)
T 3gvc_A 110 NAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV------------------AVGG 171 (277)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------------------CCTT
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------------------CCCC
Confidence 99976211 11233455667889999999999999854 23 3688888865441 1233
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcc-c-c------e---eecCCCcccHhhHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY-N-K------V---VNIPNSMTVLDELLPI 577 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~-~-~------~---~~~~~~~~~v~D~a~~ 577 (668)
.+.|+.||...+.+.+.+.. ..++++..++|+.+++|.. ...... . . . ......+...+|+|++
T Consensus 172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 249 (277)
T 3gvc_A 172 TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ--QTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGI 249 (277)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHTCC------CCHHHHHHHHHSSCBCHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH--HHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHH
Confidence 46899999999999887642 3689999999999998852 111110 0 0 0 0011356789999999
Q ss_pred HHHHHhcc----CCceeeecCCCccC
Q 005949 578 SIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++.++... .+.++++.+|...+
T Consensus 250 v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 250 VVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred HHHHcCCccCCccCcEEEECCcchhc
Confidence 99999653 46789998876544
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-16 Score=157.55 Aligned_cols=196 Identities=15% Similarity=0.107 Sum_probs=143.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------------ccccccCChhHHHHHh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------------YGKGRLEDCSSLIADV 427 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------------~~~~D~~d~~~~~~~l 427 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|++++++++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 5799999999999999999999998653 3457999999998888
Q ss_pred hhc-----CCCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCC
Q 005949 428 QSV-----KPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPE 496 (668)
Q Consensus 428 ~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~ 496 (668)
+.. ++|+|||+||.. ......++....+++|+.|+.++++++... +.++|++||...+.+..
T Consensus 94 ~~~~~~~g~id~lv~nAg~~---~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 166 (278)
T 3sx2_A 94 QAGLDELGRLDIVVANAGIA---PMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG---- 166 (278)
T ss_dssp HHHHHHHCCCCEEEECCCCC---CCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC----
T ss_pred HHHHHHcCCCCEEEECCCCC---CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc----
Confidence 754 789999999977 233345667788999999999999997542 34788888876542211
Q ss_pred CCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-------HHHHhhcccc-----e
Q 005949 497 GSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-------FITKISRYNK-----V 561 (668)
Q Consensus 497 ~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~-----~ 561 (668)
.+.++...|+.||...+.+++.+.. ..++++..++|+.+..+.. +......... .
T Consensus 167 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (278)
T 3sx2_A 167 ----------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMG 236 (278)
T ss_dssp ----------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTS
T ss_pred ----------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhh
Confidence 1112346799999999999888643 3579999999999988751 1111111110 0
Q ss_pred eecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 562 VNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 562 ~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
...+..+...+|+|+++++++... .+.++++.+|.
T Consensus 237 ~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 237 NAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp CSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 112246778999999999998653 46689888764
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=7e-17 Score=157.30 Aligned_cols=191 Identities=14% Similarity=0.016 Sum_probs=132.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC--Ccc---------------------cccccccCChhHHHHHhhhc-------CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG--IPF---------------------EYGKGRLEDCSSLIADVQSV-------KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g--~~v---------------------~~~~~D~~d~~~~~~~l~~~-------~~d 433 (668)
++|+||||+|+||+++++.|+++| ++| .++.+|++|++++.++++.+ ++|
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id 83 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS 83 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCc
Confidence 589999999999999999999999 754 34568999999888888754 689
Q ss_pred EEEEcccccC--CCCccccccccccceehhhhhhHHHHHHHHHc----------------CCcEEEEecceeEeecCCCC
Q 005949 434 HVFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH----------------GILMMNYATGCIFEYDAAHP 495 (668)
Q Consensus 434 ~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----------------~~~~v~~sS~~vy~~~~~~p 495 (668)
+|||+||... .+.......+....+++|+.++.++++++... ..++|++||...+....
T Consensus 84 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--- 160 (250)
T 1yo6_A 84 LLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN--- 160 (250)
T ss_dssp EEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC---
T ss_pred EEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc---
Confidence 9999999762 00112234455678899999999999988653 34788888876653221
Q ss_pred CCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHh
Q 005949 496 EGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 496 ~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 572 (668)
....+..+...|+.||...|.+++.+... .++++..++|+.+..+.. . . ..++..+
T Consensus 161 --------~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~----~-------~~~~~~~ 219 (250)
T 1yo6_A 161 --------TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG--G----K-------NAALTVE 219 (250)
T ss_dssp --------CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------H
T ss_pred --------ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC--C----C-------CCCCCHH
Confidence 11122244578999999999998876433 489999999998876632 1 0 1356799
Q ss_pred hHHHHHHHHHhcc---CCceeeecCCCcc
Q 005949 573 ELLPISIEMAKRN---LRGIWNFTNPGVV 598 (668)
Q Consensus 573 D~a~~~~~~~~~~---~~g~~ni~~~~~~ 598 (668)
|+|++++.++... ..|.|....+..+
T Consensus 220 ~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 248 (250)
T 1yo6_A 220 QSTAELISSFNKLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp HHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred HHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence 9999999999764 3565655554433
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=8.6e-17 Score=157.11 Aligned_cols=193 Identities=16% Similarity=0.138 Sum_probs=141.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|.++++++++.. ++|
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 93 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEID 93 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence 589999999999999999999999854 34568999999888888765 689
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... .....++....+++|+.++.++++++. +.+. ++|++||...+.
T Consensus 94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------------ 155 (256)
T 3ezl_A 94 VLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK------------------ 155 (256)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG------------------
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc------------------
Confidence 9999999772111 122345566789999999888887763 3444 788888876542
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
+.++.+.|+.||...+.+++.+.. ..++++..++|+.+..+. .+...+.... ....+...+|+|+++
T Consensus 156 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~ 231 (256)
T 3ezl_A 156 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI----PVRRLGSPDEIGSIV 231 (256)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHS----TTSSCBCHHHHHHHH
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcC----CCCCCcCHHHHHHHH
Confidence 123447899999999988877643 357999999999998774 1222222211 123466799999999
Q ss_pred HHHHhcc----CCceeeecCCCcc
Q 005949 579 IEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~~ 598 (668)
+.++... .+.+|++.+|..+
T Consensus 232 ~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 232 AWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHHhCCcccCCcCcEEEECCCEeC
Confidence 9998643 4668999887543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-17 Score=160.24 Aligned_cols=200 Identities=10% Similarity=0.006 Sum_probs=145.7
Q ss_pred cEEEEEcCC--cchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRT--GWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~--G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+ |+||+++++.|+++|++| .++.+|++|++++.++++.+ ++|
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 94 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLD 94 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEE
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999 999999999999999854 34678999999998888765 789
Q ss_pred EEEEcccccCC-----CCcc-ccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-----PNVD-WCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 434 ~Vih~a~~~~~-----~~~~-~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
+|||+||.... +..+ ....+....+++|+.++.++++++... +.+++++||...+.+
T Consensus 95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------------- 160 (271)
T 3ek2_A 95 GLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-------------- 160 (271)
T ss_dssp EEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------------
T ss_pred EEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC--------------
Confidence 99999997621 0111 334556678899999999999999765 347888888765421
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--------hHHHHhhcccceeecCCCcccHhh
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTVLDE 573 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D 573 (668)
.+..+.|+.||...+.+.+.+.. ..++++..+.|+.+..+. .+...+.... ....+...+|
T Consensus 161 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~~~~~ped 232 (271)
T 3ek2_A 161 ----IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNS----PLKRNVTIEQ 232 (271)
T ss_dssp ----CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHS----TTSSCCCHHH
T ss_pred ----CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcC----CcCCCCCHHH
Confidence 22347899999999999888643 347999999999988764 1111111111 1224667999
Q ss_pred HHHHHHHHHhcc----CCceeeecCCCccCHHHHHH
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPGVVSHNEILE 605 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~ 605 (668)
+|++++.++... .+.++++.+|..+++.++++
T Consensus 233 va~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 233 VGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp HHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred HHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 999999999753 46799999998877766543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-16 Score=154.97 Aligned_cols=194 Identities=12% Similarity=0.069 Sum_probs=142.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDI 106 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 579999999999999999999999854 35678999999988888764 6899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
|||+||...... .+...++....+++|+.|+.++++++... +. ++|++||...+. +
T Consensus 107 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~------------------~ 168 (271)
T 4ibo_A 107 LVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL------------------A 168 (271)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------B
T ss_pred EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC------------------C
Confidence 999999762111 12234556678999999999998887543 33 788888865431 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H------HHHhhcccceeecCCCcccHhhHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F------ITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~------~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
.++...|+.||...+.+++.+.. ..++++..++|+.+..+.. + ...+.... ....+...+|+|++
T Consensus 169 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedva~~ 244 (271)
T 4ibo_A 169 RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKART----PAKRWGKPQELVGT 244 (271)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHS----TTCSCBCGGGGHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcC----CCCCCcCHHHHHHH
Confidence 23346899999999999888643 3589999999999988742 1 11111111 12246679999999
Q ss_pred HHHHHhcc----CCceeeecCCCccC
Q 005949 578 SIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
++.++... .+.++++.+|...+
T Consensus 245 v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 245 AVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHhCccccCCCCcEEEECCCeecc
Confidence 99998653 46789998876543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=155.80 Aligned_cols=197 Identities=12% Similarity=0.133 Sum_probs=140.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+|||
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 92 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 92 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 579999999999999999999999864 34568999999988888754 6899999
Q ss_pred cccccCCCCc-------cccccccccceehhhhhhHHHHHHHHHc----------CC-cEEEEecceeEeecCCCCCCCC
Q 005949 438 AAGVTGRPNV-------DWCESHKTDTIRTNVAGTLTLADVCRDH----------GI-LMMNYATGCIFEYDAAHPEGSG 499 (668)
Q Consensus 438 ~a~~~~~~~~-------~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----------~~-~~v~~sS~~vy~~~~~~p~~~~ 499 (668)
+||....... ....++....+++|+.++.++++++... +. ++|++||...+.+
T Consensus 93 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------- 163 (265)
T 2o23_A 93 CAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG--------- 163 (265)
T ss_dssp CCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC---------
T ss_pred CCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC---------
Confidence 9997621111 1233445677889999999999999765 43 6778888765522
Q ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcc-cceeecCCCcccHhh
Q 005949 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRY-NKVVNIPNSMTVLDE 573 (668)
Q Consensus 500 ~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~-~~~~~~~~~~~~v~D 573 (668)
.++...|+.||...+.+++.+.. ..++++..++|+.+..+.. +....... .........+...+|
T Consensus 164 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (265)
T 2o23_A 164 ---------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAE 234 (265)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHH
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHH
Confidence 12346899999999988877642 2589999999999887641 11000000 000111235678999
Q ss_pred HHHHHHHHHhcc--CCceeeecCCCcc
Q 005949 574 LLPISIEMAKRN--LRGIWNFTNPGVV 598 (668)
Q Consensus 574 ~a~~~~~~~~~~--~~g~~ni~~~~~~ 598 (668)
+|++++.++... .+.++++.++..+
T Consensus 235 va~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 235 YAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp HHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHhhcCccCceEEEECCCEec
Confidence 999999999765 4668888877543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=154.46 Aligned_cols=200 Identities=17% Similarity=0.117 Sum_probs=136.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|.++++++++.. ++|+|||
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 89 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVN 89 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 579999999999999999999999854 45678999999988888765 7899999
Q ss_pred cccccCCCCc--cccccccccceehhhhhhHHHHHHHHHc---------CCcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNV--DWCESHKTDTIRTNVAGTLTLADVCRDH---------GILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 438 ~a~~~~~~~~--~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+||....+.. ....++....+++|+.++.++++++... +.+++++||...+.
T Consensus 90 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------- 152 (261)
T 3n74_A 90 NAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----------------- 152 (261)
T ss_dssp CCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-----------------
T ss_pred CCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-----------------
Confidence 9997621111 1133455667889999999999888543 22578888865441
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHH----hhcccceeecCCCcccHhhHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITK----ISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~----~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
+.+....|+.||...+.+++.+.. ..++++..++|+.+..+.. +... ....-........+.+.+|+|++
T Consensus 153 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 231 (261)
T 3n74_A 153 -PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEA 231 (261)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHH
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHH
Confidence 223346799999999999888643 2589999999998887641 1100 00000000112357789999999
Q ss_pred HHHHHhcc----CCceeeecCCCccCHH
Q 005949 578 SIEMAKRN----LRGIWNFTNPGVVSHN 601 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~~~s~~ 601 (668)
++.++... .+.++++.+|..++..
T Consensus 232 ~~~l~s~~~~~itG~~i~vdgG~~~~~~ 259 (261)
T 3n74_A 232 AAFLCSPQASMITGVALDVDGGRSIGGR 259 (261)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred HHHHcCCcccCcCCcEEEecCCcccCCC
Confidence 99998643 4679999998776543
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=155.98 Aligned_cols=193 Identities=14% Similarity=0.112 Sum_probs=139.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 104 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGI 104 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 479999999999999999999999854 34568999999988887765 7899
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH------cCC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD------HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~------~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|||+||...... .+...++....+++|+.|+.++++++.. .+. ++|++||...+.
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~----------------- 167 (279)
T 3sju_A 105 LVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ----------------- 167 (279)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-----------------
Confidence 999999762111 1122344556788999999999998855 333 788888876541
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcc---------cc------eeecCCCc
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY---------NK------VVNIPNSM 568 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~---------~~------~~~~~~~~ 568 (668)
+.+....|+.||...+.+++.+.. ..++++..++|+.+..+.. ...... .. .......+
T Consensus 168 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 244 (279)
T 3sju_A 168 -GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA--ERVREGYARHWGVTEQEVHERFNAKIPLGRY 244 (279)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHH--HHHHHSCCSSSCCCHHHHHHHHHTTCTTSSC
T ss_pred -CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHH--HHHHhhhhhcccCChHHHHHHHHhcCCCCCC
Confidence 122346899999999888877532 3589999999999988742 111110 00 00111256
Q ss_pred ccHhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 569 TVLDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
...+|+|++++.++... .+.++++.+|.
T Consensus 245 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 245 STPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp BCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred CCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 78999999999998753 46688888764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-16 Score=153.78 Aligned_cols=196 Identities=14% Similarity=0.080 Sum_probs=139.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+||
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 84 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILV 84 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 579999999999999999999999865 23457999999988888754 679999
Q ss_pred EcccccCCCC-ccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||...... .....++....+++|+.++.++.+++ ++.+. ++|++||...+.+ .+
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~ 146 (255)
T 2q2v_A 85 NNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG------------------ST 146 (255)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC------------------CT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC------------------CC
Confidence 9999762111 11233455678899999887777765 45554 7888888765421 12
Q ss_pred CCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH---HHhh--cc---cce---eecCCCcccHhhH
Q 005949 511 TGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI---TKIS--RY---NKV---VNIPNSMTVLDEL 574 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~---~~~~--~~---~~~---~~~~~~~~~v~D~ 574 (668)
....|+.||...+.+.+.+.. ..++++..++|+.++++.. +. .... .. ... ......+.+.+|+
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 226 (255)
T 2q2v_A 147 GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHL 226 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHH
Confidence 346799999999998887632 3589999999999999852 11 0000 00 000 0112357899999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCc
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|++++.++... .+.+|++.++..
T Consensus 227 A~~~~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 227 GELVLFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCCccCCCCCCEEEECCCcc
Confidence 99999998653 366899988744
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.7e-17 Score=156.50 Aligned_cols=198 Identities=11% Similarity=0.065 Sum_probs=142.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 86 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDI 86 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999854 34678999999998888765 7899
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH-----Hc-CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR-----DH-GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~-----~~-~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||.... +..+...++....+++|+.++.++++++. +. +.++|++||...+..
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 149 (257)
T 3imf_A 87 LINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA----------------- 149 (257)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-----------------
Confidence 9999996521 11122344556788999999999999983 33 347888888765421
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC----eeEeEEeeeecCCCCChhhH----HHH-hhcccceeecCCCcccHhhHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN----VCTLRVRMPISSDLNNPRNF----ITK-ISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~----~~~l~~~~~r~~~~~g~~~~----~~~-~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.+....|+.||...+.+.+.+.. ..++++..++|+.+.++... ... .............+...+|+|+++
T Consensus 150 -~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 228 (257)
T 3imf_A 150 -GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLA 228 (257)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 12346799999999998887642 35899999999999877411 110 000000000112467899999999
Q ss_pred HHHHhcc----CCceeeecCCCccC
Q 005949 579 IEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~~s 599 (668)
+.++... .+.++++.+|..++
T Consensus 229 ~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 229 YYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred HHHcCchhcCccCCEEEECCCcccC
Confidence 9998653 46689998886654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-15 Score=147.94 Aligned_cols=223 Identities=14% Similarity=0.086 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|.+|||||++.||+++++.|+++ |.+|++.+|... .++....+ ...++..+.+|++|++++++++++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~--~l~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKD--VLDAAIAE-IGGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-cCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999999 789999998642 22221111 134678899999999998877642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
.++|++||+||.... +.+.+++...+++|+.|+..+.+++... ..-.++|.+||...+.+..
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~------------- 168 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP------------- 168 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT-------------
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC-------------
Confidence 379999999997542 2344556789999999999999877642 1235899999976643322
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC---C--hHHHHHHHHHcCCCceeecCCCceEec
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE---K--LIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|.....+.+.++.++ |+++..+-||.|-.|..... . ....+.......-++. -+
T Consensus 169 -~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~ 238 (273)
T 4fgs_A 169 -AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RV 238 (273)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SC
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CC
Confidence 13469999999999999988764 79999999999987753210 0 0111222222222211 24
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+|+|.+++.++... -.|+.+.+.+|.
T Consensus 239 g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 239 GRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence 57889999999888643 257888888764
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-16 Score=153.59 Aligned_cols=194 Identities=13% Similarity=0.052 Sum_probs=137.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|||
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 85 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN 85 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 589999999999999999999999865 23467999999888887744 6899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHH----HHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADV----CRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~----~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... .+...++....+++|+.++.++.++ +++.+. ++|++||...+.+ .++
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~ 147 (254)
T 1hdc_A 86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG------------------LAL 147 (254)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------------CTT
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC------------------CCC
Confidence 999762111 1223345567889999999855544 455554 7888888765521 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcc--ccee-ecC-CCcc-cHhhHHHHHHHHHh
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRY--NKVV-NIP-NSMT-VLDELLPISIEMAK 583 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~--~~~~-~~~-~~~~-~v~D~a~~~~~~~~ 583 (668)
...|+.||...|.+.+.+.. ..++++..++|+.++++.. ...... .... ..+ ..+. +.+|+|++++.++.
T Consensus 148 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s 225 (254)
T 1hdc_A 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT--AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLS 225 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHS
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc--cccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC
Confidence 46899999999998887643 3589999999999998742 221110 0000 011 2456 89999999999987
Q ss_pred cc----CCceeeecCCCc
Q 005949 584 RN----LRGIWNFTNPGV 597 (668)
Q Consensus 584 ~~----~~g~~ni~~~~~ 597 (668)
.. .+.++++.++..
T Consensus 226 ~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 226 DTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp GGGTTCCSCEEEESTTTT
T ss_pred chhcCCCCCEEEECCCcc
Confidence 53 356888887643
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.9e-16 Score=152.62 Aligned_cols=193 Identities=15% Similarity=0.076 Sum_probs=138.0
Q ss_pred cEEEEEcCCcc-hhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGW-IGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~-iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+ ||+++++.|+++|++| .++.+|++|+++++++++.+ ++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 47999999985 9999999999999854 35678999999998888765 78
Q ss_pred CEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc-----C-CcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 433 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|+|||+||...... .+...++....+++|+.++.++++++... + .+++++||...+.
T Consensus 103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~---------------- 166 (266)
T 3o38_A 103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR---------------- 166 (266)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC----------------
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC----------------
Confidence 99999999762111 12234455678899999999999998764 3 3677777765441
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc-----ceeecCCCcccHhhHHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN-----KVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~v~D~a~~ 577 (668)
+.++.+.|+.||...|.+++.+.. ..++++..++|+.+..+.. ....... ........+.+.+|+|++
T Consensus 167 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~--~~~~~~~~~~~~~~~~~~~r~~~~~dva~~ 242 (266)
T 3o38_A 167 --AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFL--EKTSSSELLDRLASDEAFGRAAEPWEVAAT 242 (266)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTTSSCCCHHHHHHH
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhh--hccCcHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence 123447899999999999887643 3689999999999887641 1111000 000112356789999999
Q ss_pred HHHHHhcc----CCceeeecCCC
Q 005949 578 SIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~ 596 (668)
++.++... .+.++++.+|.
T Consensus 243 i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 243 IAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp HHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHHcCccccCccCCEEEEcCCc
Confidence 99998753 46688888763
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.3e-15 Score=143.74 Aligned_cols=228 Identities=15% Similarity=0.152 Sum_probs=158.0
Q ss_pred CC-CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 1 MA-TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 1 m~-~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
|. .+++|++|||||++.||+++++.|+++ +.+|++.+|...... ...+ .....++..+.+|++|++.+.+++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~v~~ 76 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDAL--AQRQPRATYLPVELQDDAQCRDAVAQ 76 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHH--HHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHH--HhcCCCEEEEEeecCCHHHHHHHHHH
Confidence 44 356899999999999999999999999 788999888643211 1111 11245788999999999988777642
Q ss_pred -----CCCCEEEEcCccCCc---ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 -----ESIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|.+||...+.+..
T Consensus 77 ~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~-------- 148 (258)
T 4gkb_A 77 TIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG-------- 148 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS--------
T ss_pred HHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC--------
Confidence 479999999997432 2334456678899999999888766421 0126999999977643322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCCc
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
....|+.+|...+.+.+..+.+ +|+++..+.||.|-.|..... .............-++ +
T Consensus 149 ------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g---- 215 (258)
T 4gkb_A 149 ------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G---- 215 (258)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T----
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C----
Confidence 1346999999999999998765 489999999999987754210 0000111222222211 0
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+.+...+|+|.+++.++... -.|+.+.+.+|.
T Consensus 216 -~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 216 -RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp -TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred -CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 13457899999999888543 257889998775
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=6.9e-15 Score=142.07 Aligned_cols=214 Identities=16% Similarity=0.187 Sum_probs=149.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||++.||+++++.|+++ |.+|++.+|.... . ......+.+|++|++.+..+++.
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~----~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPE----G------LPEELFVEADLTTKEGCAIVAEATRQRL 76 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCT----T------SCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchh----C------CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999 7889999885321 1 12334789999999998776632
Q ss_pred CCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||...+-+...
T Consensus 77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~------- 148 (261)
T 4h15_A 77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPE------- 148 (261)
T ss_dssp SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------
T ss_pred CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCC-------
Confidence 479999999996432 22344567789999999988887654 333 479999999765332210
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHH--------------HHHHHHHcCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIP--------------KFILLAMRGL 211 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~--------------~~~~~~~~~~ 211 (668)
....|+.+|...+.+.+..+.+ +|+++..+.||.|-.|... .... .+.......
T Consensus 149 ------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~- 219 (261)
T 4h15_A 149 ------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASV--RLAERLAKQAGTDLEGGKKIIMDGLGG- 219 (261)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH--HHHHHHHHHTTCCHHHHHHHHHHHTTC-
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchh--hhhHHHHHhhccchhhHHHHHHHHhcC-
Confidence 1346999999999999988765 4899999999998765320 0111 111111111
Q ss_pred CceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 212 PLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 212 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+++ .-+...+|+|.+++.++... -.|+.+.+.+|-
T Consensus 220 -~Pl-------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 220 -IPL-------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp -CTT-------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -CCC-------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 111 13567899999999888543 257888888764
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-16 Score=152.21 Aligned_cols=214 Identities=12% Similarity=0.049 Sum_probs=141.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.|++|++|||||+|+||+++++.|+++ +++|++.+|... ........ ....++.++.+|++|.+.+.+++..
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLD--TLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHH--HHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999 688998888532 11111110 0123578899999999988777632
Q ss_pred ----CCCCEEEEcCc--cC------C---cccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCC
Q 005949 79 ----ESIDTIMHFAA--QT------H---VDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGET 139 (668)
Q Consensus 79 ----~~~d~Vih~a~--~~------~---~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~ 139 (668)
.++|+|||+|| .. . .....+++...+++|+.++.++.+++. +.+ ..++|++||...+...
T Consensus 78 ~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~ 156 (260)
T 2qq5_A 78 REQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM 156 (260)
T ss_dssp HHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC
T ss_pred HhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC
Confidence 46899999994 21 1 122334456788889999877776553 333 5799999998775421
Q ss_pred CCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceee
Q 005949 140 DEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 140 ~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (668)
+...|+.+|...+.+.+.++.+ +++++.+++||.|..+.... ....-.. .........
T Consensus 157 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~--~~~~~~~~~ 217 (260)
T 2qq5_A 157 ---------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE--HMAKEEV--LQDPVLKQF 217 (260)
T ss_dssp ---------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------
T ss_pred ---------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH--hhccccc--cchhHHHHH
Confidence 2357999999999999988754 48999999999998875321 1100000 000000000
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
.. ....+...+|+|++++.++..+
T Consensus 218 ~~--~~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 218 KS--AFSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCT
T ss_pred Hh--hhccCCCHHHHHHHHHHHhcCc
Confidence 00 0112357899999999988754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.5e-16 Score=152.38 Aligned_cols=195 Identities=13% Similarity=0.060 Sum_probs=138.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+|
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999864 23567999999888888763 57999
Q ss_pred EEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcCC--cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHGI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 436 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
||+||...... ......+....+++|+.++.++.+++. +.+. ++|++||...+.+
T Consensus 87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------------------ 148 (251)
T 1zk4_A 87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG------------------ 148 (251)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC------------------
Confidence 99999762111 112234456788999998887776654 4443 6778888765521
Q ss_pred CCCCCcchhhHHHHHHHHHhccC-----eeEeEEeeeecCCCCChhhH--HHHhh-c-ccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNF--ITKIS-R-YNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~--~~~~~-~-~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.++.+.|+.||...|.+++.+.. ..++++.+++|+.++++..- ..... . .... .....+.+.+|+|++++
T Consensus 149 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~ 227 (251)
T 1zk4_A 149 DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTK-TPMGHIGEPNDIAYICV 227 (251)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTT-CTTSSCBCHHHHHHHHH
T ss_pred CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhc-CCCCCCcCHHHHHHHHH
Confidence 12346899999999998877532 46899999999999988521 00000 0 0000 01135788999999999
Q ss_pred HHHhcc----CCceeeecCCCc
Q 005949 580 EMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~ 597 (668)
.++... .+..|++.+|..
T Consensus 228 ~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 228 YLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTTGG
T ss_pred HHcCcccccccCcEEEECCCcc
Confidence 998653 356899988753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.1e-16 Score=157.68 Aligned_cols=185 Identities=11% Similarity=0.066 Sum_probs=128.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhc----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSV---- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~---- 430 (668)
++|+||||+|+||+++++.|+++|++|. .+.+|++|++++.++++..
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999998653 3467999999998888855
Q ss_pred -CCCEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHH----HHcCC-cEEEEecceeEeecCCCCCCCCCCCC
Q 005949 431 -KPTHVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVC----RDHGI-LMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 431 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~----~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
++|+|||+||.... |......++....+++|+.|+.++++++ ++.+. ++|++||+..+...
T Consensus 86 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~------------ 153 (324)
T 3u9l_A 86 GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT------------ 153 (324)
T ss_dssp SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC------------
Confidence 78999999997621 1112233455667899999999999999 55554 78888887654211
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHHHHh------------hccc---ce----
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKI------------SRYN---KV---- 561 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~------------~~~~---~~---- 561 (668)
.+..+.|+.||...|.+.+.+... .++++.+++|+.+.++..+.... .... ..
T Consensus 154 -----~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (324)
T 3u9l_A 154 -----PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIK 228 (324)
T ss_dssp -----CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHH
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHH
Confidence 112367999999999999887533 58999999999987654322110 0000 00
Q ss_pred --e-ecCCCcccHhhHHHHHHHHHhcc
Q 005949 562 --V-NIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 562 --~-~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
. .........+|+|++++.+++.+
T Consensus 229 ~~~~~l~~~~~~p~~vA~aiv~~~~~~ 255 (324)
T 3u9l_A 229 KAFAAIVPPDADVSLVADAIVRVVGTA 255 (324)
T ss_dssp HHHHHTSCTTCCTHHHHHHHHHHHTSC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence 0 00112246799999999999876
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.9e-16 Score=153.09 Aligned_cols=185 Identities=14% Similarity=0.121 Sum_probs=137.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-cc------------------------ccccccCCh-hHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-FE------------------------YGKGRLEDC-SSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-v~------------------------~~~~D~~d~-~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||+++++.|+++|++ |. ++.+|++|+ +++.++++.. ++
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 85 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV 85 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999999986 42 245788888 8887777654 68
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
|+|||+||.. ...+....+++|+.++.++++++... +.++|++||...+..
T Consensus 86 d~lv~~Ag~~-------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 144 (254)
T 1sby_A 86 DILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-------------- 144 (254)
T ss_dssp CEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--------------
T ss_pred CEEEECCccC-------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC--------------
Confidence 9999999965 24566788999999999999998643 236888888766521
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHHHHhh---cccc---eeecCCCcccHhhHH
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKIS---RYNK---VVNIPNSMTVLDELL 575 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~~v~D~a 575 (668)
.+....|+.||...|.+++.+... .++++..++|+.+.++.. .... .... .......+.+.+|+|
T Consensus 145 ----~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dvA 218 (254)
T 1sby_A 145 ----IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV--HTFNSWLDVEPRVAELLLSHPTQTSEQCG 218 (254)
T ss_dssp ----CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH--HSCCCGGGSCTTHHHHHTTSCCEEHHHHH
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccc--cccchhhhhhHHHHHHHhcCCCCCHHHHH
Confidence 123468999999999999887543 589999999999887741 1110 0000 000111334799999
Q ss_pred HHHHHHHhcc-CCceeeecCC
Q 005949 576 PISIEMAKRN-LRGIWNFTNP 595 (668)
Q Consensus 576 ~~~~~~~~~~-~~g~~ni~~~ 595 (668)
++++.++.+. .+.+|++.+|
T Consensus 219 ~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 219 QNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETT
T ss_pred HHHHHHHHcCCCCCEEEEeCC
Confidence 9999998765 4568888876
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-16 Score=156.15 Aligned_cols=197 Identities=12% Similarity=0.003 Sum_probs=140.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhc----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSV---- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~---- 430 (668)
++|+||||+|+||+++++.|+++|++|. ++.+|++|++++.++++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999998652 2347999999988888764
Q ss_pred -CCCEEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 431 -KPTHVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 431 -~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
++|+|||+||..... .......+....+++|+.++.++++++... +.++|++||.. +.
T Consensus 99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~-------------- 163 (303)
T 1yxm_A 99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA-------------- 163 (303)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT--------------
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc--------------
Confidence 689999999965211 111233445667899999999999998652 34678888865 21
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHH------HHhhcccceeecCCCcccHhhH
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFI------TKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+.+....|+.+|...+.+.+.+.. ..++++.+++|+.++++..+- ...............+.+.+|+
T Consensus 164 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 239 (303)
T 1yxm_A 164 ----GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV 239 (303)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHH
T ss_pred ----CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHH
Confidence 112336799999999998877643 248999999999999984211 0111000000011247789999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
|++++.++... .+..|++.+|..++
T Consensus 240 A~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 240 SSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 99999998653 35689999886543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.2e-16 Score=155.10 Aligned_cols=190 Identities=12% Similarity=0.068 Sum_probs=139.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++|+||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWY 106 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 579999999999999999999999864 34567999999988888754 789
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH-----H-cCCcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR-----D-HGILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~-----~-~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||...... .....++....+++|+.++.++++++. + .+.++|++||...+.+
T Consensus 107 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 170 (267)
T 4iiu_A 107 GVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG---------------- 170 (267)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC----------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC----------------
Confidence 9999999772111 122345667788999999999999873 3 3347888888765522
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh-----hHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-----NFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.++...|+.||...+.+.+.+.. ..++++..++|+.+..+. ..........+ ...+...+|+|+++
T Consensus 171 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p----~~~~~~~edva~~~ 244 (267)
T 4iiu_A 171 --NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIP----MKRMGQAEEVAGLA 244 (267)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCT----TCSCBCHHHHHHHH
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCC----CCCCcCHHHHHHHH
Confidence 12346899999988777766532 248999999999998774 22222222111 12466799999999
Q ss_pred HHHHhcc----CCceeeecCC
Q 005949 579 IEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~ 595 (668)
+.++... .+.++++.+|
T Consensus 245 ~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 245 SYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCCcccCccCCEEEeCCC
Confidence 9998753 4668888775
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.6e-16 Score=153.21 Aligned_cols=193 Identities=15% Similarity=0.044 Sum_probs=141.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999854 34668999999988887754 789
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+|||+||...... .+...++....+++|+.++.++++++... +.++|++||...+.
T Consensus 101 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----------------- 163 (266)
T 4egf_A 101 VLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA----------------- 163 (266)
T ss_dssp EEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------------
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc-----------------
Confidence 9999999772111 12233445667889999999999998543 34788888876552
Q ss_pred CCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
+.+....|+.||...+.+.+.+.. ..++++..++|+.+..+..- ...+... .....+...+|+|
T Consensus 164 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~p~~r~~~p~dva 238 (266)
T 4egf_A 164 -PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIAR----IPLGRFAVPHEVS 238 (266)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTT----CTTSSCBCHHHHH
T ss_pred -CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhc----CCCCCCcCHHHHH
Confidence 122346899999999998887643 35899999999999887421 1111111 0112466799999
Q ss_pred HHHHHHHhcc----CCceeeecCCCcc
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
+++++++... .+.++++.+|..+
T Consensus 239 ~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 239 DAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHhCchhcCccCcEEEECCCccC
Confidence 9999998753 4678999887543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.9e-16 Score=153.70 Aligned_cols=195 Identities=16% Similarity=0.091 Sum_probs=140.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc-------------------------------------cccccCChhHHHHH
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY-------------------------------------GKGRLEDCSSLIAD 426 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~-------------------------------------~~~D~~d~~~~~~~ 426 (668)
++++||||+|+||+++++.|+++|++|.+ +.+|++|+++++++
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 47999999999999999999999986532 34699999998888
Q ss_pred hhhc-----CCCEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCC
Q 005949 427 VQSV-----KPTHVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAH 494 (668)
Q Consensus 427 l~~~-----~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~ 494 (668)
++.. ++|+|||+||....... +...++....+++|+.++.++++++.. . +.++|++||...+.+
T Consensus 96 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---- 171 (280)
T 3pgx_A 96 VADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA---- 171 (280)
T ss_dssp HHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC----
Confidence 8754 78999999997721111 123345566788999999999999843 2 347888888765421
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh----HHHHhhcccc-------
Q 005949 495 PEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN----FITKISRYNK------- 560 (668)
Q Consensus 495 p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~----~~~~~~~~~~------- 560 (668)
.+..+.|+.||...+.+.+.+.. ..++++..++|+.++++.. +.........
T Consensus 172 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T 3pgx_A 172 --------------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPP 237 (280)
T ss_dssp --------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCC
T ss_pred --------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhh
Confidence 12346899999999999888643 3689999999999998852 1111111110
Q ss_pred eeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 561 VVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 561 ~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
....+..+.+.+|+|++++.++... .+.++++.+|.
T Consensus 238 ~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 238 MPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp BTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred cccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 0111224778999999999998643 46688887763
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.5e-16 Score=153.57 Aligned_cols=196 Identities=16% Similarity=0.077 Sum_probs=138.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 579999999999999999999999864 23567999999988888754 6899
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||..... ..+...++....+++|+.++.++++++... + .++|++||...+.+
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 145 (256)
T 1geg_A 83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG----------------- 145 (256)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-----------------
Confidence 99999976210 111223445567899999999988887642 3 47888888754421
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhc-----ccc----ee-ec-CCCcccH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISR-----YNK----VV-NI-PNSMTVL 571 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~-----~~~----~~-~~-~~~~~~v 571 (668)
.+....|+.||...|.+.+.+.. ..++++..++|+.+.++.. +...... ... .. .. ...+...
T Consensus 146 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 224 (256)
T 1geg_A 146 -NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEP 224 (256)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCH
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCH
Confidence 12236799999999998887642 3589999999999998741 1110000 000 00 01 1247789
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
+|+|++++.++... .+.++++.+|..
T Consensus 225 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 225 EDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 99999999998653 456888877643
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.5e-16 Score=153.38 Aligned_cols=194 Identities=16% Similarity=0.055 Sum_probs=142.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id 108 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLD 108 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999864 34568999999988888765 789
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... .+...++....+++|+.|+.++++++.. .+ .++|++||...+.+
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 171 (269)
T 4dmm_A 109 VLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG----------------- 171 (269)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-----------------
Confidence 9999999772111 1223455567889999999999999743 33 47888888765422
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--hHHH-HhhcccceeecCCCcccHhhHHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--NFIT-KISRYNKVVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~~~~-~~~~~~~~~~~~~~~~~v~D~a~~~~~~ 581 (668)
.+....|+.||...+.+.+.+.. ..++++..++|+.+..+. .... .+.... ....+...+|+|++++.+
T Consensus 172 -~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~----p~~r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 172 -NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVI----PLGRYGEAAEVAGVVRFL 246 (269)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGC----TTSSCBCHHHHHHHHHHH
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcC----CCCCCCCHHHHHHHHHHH
Confidence 12346899999988888777643 358999999999998875 2211 111111 123467799999999999
Q ss_pred Hhc-c----CCceeeecCCCccC
Q 005949 582 AKR-N----LRGIWNFTNPGVVS 599 (668)
Q Consensus 582 ~~~-~----~~g~~ni~~~~~~s 599 (668)
+.. . .+.++++.+|..+|
T Consensus 247 ~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 247 AADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp HHCGGGGGCCSCEEEESTTSCCC
T ss_pred hCCcccCCCcCCEEEECCCeecC
Confidence 875 2 36789998876543
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=155.88 Aligned_cols=198 Identities=13% Similarity=0.070 Sum_probs=140.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVD 105 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 469999999999999999999999854 34568999999988887755 789
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||...... .....++....+++|+.++.++++++.. .+ .++|++||...+.+
T Consensus 106 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 168 (269)
T 3gk3_A 106 VLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG----------------- 168 (269)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------------
T ss_pred EEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC-----------------
Confidence 9999999772111 1123445567889999999999998753 33 37888888765522
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHHHhhcccc-eeecCCCcccHhhHHHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FITKISRYNK-VVNIPNSMTVLDELLPISIEM 581 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~-~~~~~~~~~~v~D~a~~~~~~ 581 (668)
.++.+.|+.||...+.+++.+.. ..++++..+.|+.+..+.. +......... .......+...+|+|++++.+
T Consensus 169 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L 247 (269)
T 3gk3_A 169 -AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFL 247 (269)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHH
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHH
Confidence 12346899999999988877642 3589999999998887641 1111111000 001122466799999999999
Q ss_pred Hhcc----CCceeeecCCCccC
Q 005949 582 AKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~~~~s 599 (668)
+... .+.++++.+|..+|
T Consensus 248 ~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 248 CSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp TSTTCTTCCSCEEEESTTSCCC
T ss_pred hCCCcCCeeCcEEEECCCEeCc
Confidence 8754 46689999887654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-16 Score=151.79 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=131.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-------cc------------------------cccccccCChhHHHHHhhhc--
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-------PF------------------------EYGKGRLEDCSSLIADVQSV-- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-------~v------------------------~~~~~D~~d~~~~~~~l~~~-- 430 (668)
++|+||||+|+||+++++.|+++|+ +| .++.+|++|++++.++++..
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999998 54 24567999999888887753
Q ss_pred ---CCCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCC
Q 005949 431 ---KPTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 431 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
++|+|||+||...... ......+....+++|+.++.++++++.. .+. ++|++||...+.+
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------- 151 (244)
T 2bd0_A 83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA----------- 151 (244)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC-----------
Confidence 6899999999762111 1123345667789999999999999843 343 7888888766521
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHH
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.++.+.|+.||...|.+++.+. ...++++.+++|+.++++.. .... ... ...+++.+|+|+++
T Consensus 152 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--~~~~-~~~----~~~~~~~~dva~~~ 217 (244)
T 2bd0_A 152 -------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW--GKVD-DEM----QALMMMPEDIAAPV 217 (244)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTT--CCCC-STT----GGGSBCHHHHHHHH
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhh--hhcc-ccc----cccCCCHHHHHHHH
Confidence 2234689999999999886653 24689999999999998842 1110 000 12578899999999
Q ss_pred HHHHhcc
Q 005949 579 IEMAKRN 585 (668)
Q Consensus 579 ~~~~~~~ 585 (668)
+.++..+
T Consensus 218 ~~l~~~~ 224 (244)
T 2bd0_A 218 VQAYLQP 224 (244)
T ss_dssp HHHHTSC
T ss_pred HHHHhCC
Confidence 9999764
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=160.70 Aligned_cols=207 Identities=15% Similarity=0.147 Sum_probs=147.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccC-CccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCS-NLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~-~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++||||||+|+||.+++++|+++ +. +|++.+|..... ....+.. .....++.++.+|++|.+.+.+++..
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 316 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE 316 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred CCEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 479999999999999999999998 45 777888754221 1111111 11234689999999999999988853
Q ss_pred -CCCCEEEEcCccC-Cc----ccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQT-HV----DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 -~~~d~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|+|||+||.. .. ....++....+++|+.|+.++++++.... .++||++||...+-+..
T Consensus 317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~------------ 383 (496)
T 3mje_A 317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSG------------ 383 (496)
T ss_dssp TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCT------------
T ss_pred hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCC------------
Confidence 3689999999986 21 12233456789999999999999999865 78999999965433221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHH
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 232 (668)
....|+.+|...+.+.+.+.. .|++++++.||.+.+++..... .....+.+.+ ...+..++.+
T Consensus 384 --g~~~YaAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~g-----------~~~l~pe~~~ 446 (496)
T 3mje_A 384 --GQPGYAAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGMATDP---EVHDRLVRQG-----------VLAMEPEHAL 446 (496)
T ss_dssp --TCHHHHHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC---------CHHHHHTT-----------EEEECHHHHH
T ss_pred --CcHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCccccCh---HHHHHHHhcC-----------CCCCCHHHHH
Confidence 134699999999999987654 5999999999999887653211 1111111111 1235778999
Q ss_pred HHHHHHHhcCCC
Q 005949 233 EAFECILHKGEV 244 (668)
Q Consensus 233 ~ai~~~~~~~~~ 244 (668)
+++..++..+..
T Consensus 447 ~~l~~~l~~~~~ 458 (496)
T 3mje_A 447 GALDQMLENDDT 458 (496)
T ss_dssp HHHHHHHHHTCS
T ss_pred HHHHHHHcCCCc
Confidence 999999887643
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=5e-16 Score=152.23 Aligned_cols=196 Identities=15% Similarity=0.082 Sum_probs=136.4
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
.++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKL 100 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3579999999999999999999999865 22457999999888887754 68
Q ss_pred CEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEeccee-EeecCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCI-FEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 433 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~v-y~~~~~~p~~~~~~~~ee 505 (668)
|+|||+||...... .+...++....+++|+.|+.++++++.. .+ .++|++||..+ +
T Consensus 101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------- 163 (267)
T 1vl8_A 101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------------- 163 (267)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------------
Confidence 99999999762111 1122334456788999999999998843 33 37888888652 2
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH--HHhhcccceeecCCCcccHhhHHHHH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI--TKISRYNKVVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~--~~~~~~~~~~~~~~~~~~v~D~a~~~ 578 (668)
.+.++...|+.||...|.+++.+.. ..++++..++|+.+..+.. +. ...............+...+|+|+++
T Consensus 164 -~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v 242 (267)
T 1vl8_A 164 -VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVA 242 (267)
T ss_dssp -CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred -cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence 1112346899999999999887643 3589999999998887641 11 00000000000112467899999999
Q ss_pred HHHHhcc----CCceeeecCCC
Q 005949 579 IEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~ 596 (668)
+.++... .+.++++.+|.
T Consensus 243 ~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 243 VFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHcCccccCCcCCeEEECCCC
Confidence 9998653 35577777763
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.8e-17 Score=163.60 Aligned_cols=212 Identities=12% Similarity=0.083 Sum_probs=151.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc----------------------------------ccccccCChhHHHHHhhh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------------------------YGKGRLEDCSSLIADVQS 429 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------------------------~~~~D~~d~~~~~~~l~~ 429 (668)
++++||||+|+||+++++.|+++|++|. .+.+|++|++++.++++.
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 107 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT 107 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4799999999999999999999998763 245789999998888775
Q ss_pred c-----CCCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc-----------CCcEEEEecceeEeecC
Q 005949 430 V-----KPTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----------GILMMNYATGCIFEYDA 492 (668)
Q Consensus 430 ~-----~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----------~~~~v~~sS~~vy~~~~ 492 (668)
. ++|+|||+||...... .+...++....+++|+.|+.++++++... +.++|++||...+.+
T Consensus 108 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-- 185 (322)
T 3qlj_A 108 AVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG-- 185 (322)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC--
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC--
Confidence 4 7899999999772111 12234456678899999999999988543 137888888765522
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhccc-ceeecCCCc
Q 005949 493 AHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYN-KVVNIPNSM 568 (668)
Q Consensus 493 ~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~-~~~~~~~~~ 568 (668)
.+....|+.||...+.+++.+.. ..++++..+.|+ +..+.. ....... ........+
T Consensus 186 ----------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~--~~~~~~~~~~~~~~~~~ 246 (322)
T 3qlj_A 186 ----------------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMT--ETVFAEMMATQDQDFDA 246 (322)
T ss_dssp ----------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCS--CCSCCC--------CCT
T ss_pred ----------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccc--hhhhhhhhhccccccCC
Confidence 12336799999999999888643 258999999998 544321 0000000 001112245
Q ss_pred ccHhhHHHHHHHHHhcc----CCceeeecCCCcc-----------------CHHHHHHHHHhhcCCCCC
Q 005949 569 TVLDELLPISIEMAKRN----LRGIWNFTNPGVV-----------------SHNEILEMYKKYINPEFK 616 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~-----------------s~~e~~~~i~~~~g~~~~ 616 (668)
...+|+|++++.++... .+.+|++.+|... ++.|+++.+.+.+|.+.+
T Consensus 247 ~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 247 MAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp TCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 67999999999998643 4678998887655 779999999999886543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.66 E-value=2e-16 Score=153.35 Aligned_cols=191 Identities=15% Similarity=0.055 Sum_probs=140.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+|||
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 89 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVN 89 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999999999865 34568999999988888754 7899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... .+...++....+++|+.|+.++++++.. .+ .++|++||...+.+ .++
T Consensus 90 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------------~~~ 151 (248)
T 3op4_A 90 NAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG------------------NAG 151 (248)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------------CTT
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC------------------CCC
Confidence 999772111 1223455667889999999999999854 33 37888888765521 123
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
...|+.||...+.+.+.+.. ..++++..+.|+.+..+.. ........ .....+...+|+|++++.++
T Consensus 152 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~----~p~~r~~~p~dva~~v~~L~ 227 (248)
T 3op4_A 152 QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ----VPAGRLGDPREIASAVAFLA 227 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHT----CTTCSCBCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHc
Confidence 46899999988888877642 3589999999998876631 11111111 11235678999999999998
Q ss_pred hcc----CCceeeecCCC
Q 005949 583 KRN----LRGIWNFTNPG 596 (668)
Q Consensus 583 ~~~----~~g~~ni~~~~ 596 (668)
... .+.++++.+|.
T Consensus 228 s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 228 SPEAAYITGETLHVNGGM 245 (248)
T ss_dssp SGGGTTCCSCEEEESTTS
T ss_pred CCccCCccCcEEEECCCe
Confidence 653 36688888764
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.9e-16 Score=152.13 Aligned_cols=196 Identities=14% Similarity=0.065 Sum_probs=138.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------ccccccCChhHHHHHhhhc-CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------YGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~ 443 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|+++++++++.+ ++|+|||+||...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~ 86 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH 86 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCC
Confidence 5799999999999999999999998652 3467999999998777765 6899999999762
Q ss_pred CCC-ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 444 RPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 444 ~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
... .+...++....+++|+.++.++++++.. .+. ++|++||...+.+. + .+...|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~-~~~~~Y~~ 149 (246)
T 2ag5_A 87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------------V-VNRCVYST 149 (246)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------------C-TTBHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------------C-CCCccHHH
Confidence 111 1122344556788999999999999853 344 78888887644211 1 13468999
Q ss_pred hHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--HH------HhhcccceeecCCCcccHhhHHHHHHHHHhcc-
Q 005949 518 TKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--IT------KISRYNKVVNIPNSMTVLDELLPISIEMAKRN- 585 (668)
Q Consensus 518 sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--~~------~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~- 585 (668)
||...|.+++.+.. ..++++..++|+.+++|..- .. .....-........+...+|+|++++.++...
T Consensus 150 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~ 229 (246)
T 2ag5_A 150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDES 229 (246)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence 99999999888643 34899999999999988521 11 00000000001135778999999999998643
Q ss_pred ---CCceeeecCCC
Q 005949 586 ---LRGIWNFTNPG 596 (668)
Q Consensus 586 ---~~g~~ni~~~~ 596 (668)
.+.++++.+|.
T Consensus 230 ~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 230 AYVTGNPVIIDGGW 243 (246)
T ss_dssp TTCCSCEEEECTTG
T ss_pred cCCCCCEEEECCCc
Confidence 35688887763
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.6e-16 Score=155.10 Aligned_cols=198 Identities=16% Similarity=0.103 Sum_probs=144.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|++++.++++.. ++|+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 88 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDT 88 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999854 34678999999988888754 6899
Q ss_pred EEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||.... +......++....+++|+.|+.++++++... + .++|++||...+..
T Consensus 89 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------- 151 (280)
T 3tox_A 89 AFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------------- 151 (280)
T ss_dssp EEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB-----------------
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC-----------------
Confidence 9999996521 1112334556778999999999999988543 3 37888888764411
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHH----------HHhhcccceeecCCCcccHhhH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFI----------TKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+.+....|+.||...+.+.+.+... .++++..++|+.+..+...- ..+... .....+...+|+
T Consensus 152 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----~p~~r~~~pedv 227 (280)
T 3tox_A 152 GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGL----HALKRIARPEEI 227 (280)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTT----STTSSCBCHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhcc----CccCCCcCHHHH
Confidence 1223468999999999998886432 48999999999998874211 011100 011246789999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccCHHH
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s~~e 602 (668)
|++++.++... .+.++++.+|..++..-
T Consensus 228 A~~v~~L~s~~a~~itG~~i~vdGG~~~~~~a 259 (280)
T 3tox_A 228 AEAALYLASDGASFVTGAALLADGGASVTKAA 259 (280)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGCC--
T ss_pred HHHHHHHhCccccCCcCcEEEECCCccccccc
Confidence 99999999753 46799999987765433
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=150.68 Aligned_cols=193 Identities=11% Similarity=0.037 Sum_probs=137.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++|+|
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 109 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDIL 109 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 579999999999999999999999854 23568999999888887754 68999
Q ss_pred EEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cC-----CcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-----ILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 436 ih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-----~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
||+||..... ..+...++....+++|+.++.++++++.. .+ .++|++||...+.+.
T Consensus 110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~-------------- 175 (276)
T 2b4q_A 110 VNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM-------------- 175 (276)
T ss_dssp EECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC--------------
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC--------------
Confidence 9999976211 11122344567889999999988888753 33 468888887655221
Q ss_pred CCCCCCCC-cchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHH----HhhcccceeecCCCcccHhhHH
Q 005949 506 DTPNFTGS-FYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FIT----KISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 506 ~~~~~~~~-~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~----~~~~~~~~~~~~~~~~~v~D~a 575 (668)
+... .|+.||...|.+.+.+.. ..++++..++|+.+..+.. +.. .+.... ......+...+|+|
T Consensus 176 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~p~~r~~~p~dvA 249 (276)
T 2b4q_A 176 ----GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSA--SIPMGRWGRPEEMA 249 (276)
T ss_dssp ----CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHH--TSTTSSCCCHHHHH
T ss_pred ----CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhc--CCCCCCcCCHHHHH
Confidence 1124 799999999999887643 3589999999999987741 111 111100 00113467899999
Q ss_pred HHHHHHHhcc----CCceeeecCCC
Q 005949 576 PISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
++++.++... .+.++++.+|.
T Consensus 250 ~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 250 ALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhCccccCCCCCEEEeCCCc
Confidence 9999998753 45688887764
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=155.34 Aligned_cols=201 Identities=12% Similarity=0.013 Sum_probs=144.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+|||
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHI 88 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 479999999999999999999999864 35678999999888777654 6899999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
+||...... .+...++....+++|+.++.++++++... +.++|++||...+.+ .++.+
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------~~~~~ 150 (255)
T 4eso_A 89 NAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG------------------HPGMS 150 (255)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB------------------CTTBH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC------------------CCCch
Confidence 999772111 11234455677999999999999999764 347888888765422 22346
Q ss_pred cchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh----H----HHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 514 FYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN----F----ITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~----~----~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.|+.||...+.+.+.+.. ..++++..++|+.+..|.. + ................+...+|+|++++.++
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 230 (255)
T 4eso_A 151 VYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLA 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence 899999999998877642 3489999999999887631 0 0000000000011224667999999999888
Q ss_pred hcc---CCceeeecCCCccCHHH
Q 005949 583 KRN---LRGIWNFTNPGVVSHNE 602 (668)
Q Consensus 583 ~~~---~~g~~ni~~~~~~s~~e 602 (668)
... .+.++++.+|...++.+
T Consensus 231 s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 231 FEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp HTCTTCCSCEEEESTTTTTTBCC
T ss_pred CcCcCccCCEEEECCCccccCcC
Confidence 642 46789999987766543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.65 E-value=6.4e-16 Score=149.03 Aligned_cols=192 Identities=13% Similarity=0.083 Sum_probs=136.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc----------------ccccccCChhHHHHHhhhc-----CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------YGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~ 442 (668)
++++||||+|+||+++++.|+++|++|. .+.+|++| +++.++++.. ++|+|||+||..
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~ 81 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVN 81 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 5799999999999999999999998763 24578888 7666665532 689999999976
Q ss_pred CC-CCccccccccccceehhhhhhHHHHHHHH----HcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcch
Q 005949 443 GR-PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYS 516 (668)
Q Consensus 443 ~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~ 516 (668)
.. +..+...++....+++|+.++.++++++. +.+. ++|++||...+... +.++.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~~~Y~ 145 (239)
T 2ekp_A 82 VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG----------------GPVPIPAYT 145 (239)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------TTSCCHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC----------------CCCCCccHH
Confidence 21 11122344566788999999999999884 3444 78888887665321 013346899
Q ss_pred hhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhH--------HHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 517 KTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNF--------ITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 517 ~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
.||...|.+.+.+.. ..++++..++|+.+..+..- ...+... .....+...+|+|++++.++...
T Consensus 146 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~dvA~~~~~l~s~~ 221 (239)
T 2ekp_A 146 TAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITAR----IPMGRWARPEEIARVAAVLCGDE 221 (239)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTT----CTTSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHcCch
Confidence 999999998887643 24899999999999887421 0111110 01124678999999999998643
Q ss_pred ----CCceeeecCCC
Q 005949 586 ----LRGIWNFTNPG 596 (668)
Q Consensus 586 ----~~g~~ni~~~~ 596 (668)
.+..+++.+|.
T Consensus 222 ~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 222 AEYLTGQAVAVDGGF 236 (239)
T ss_dssp GTTCCSCEEEESTTT
T ss_pred hcCCCCCEEEECCCc
Confidence 35577777653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=156.74 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=139.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
++++||||+|+||+++++.|+++|++| .++.+|++|+++++++++.. ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 87 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999865 13457999999988888764 68
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHH----HHHc----CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADV----CRDH----GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~----~~~~----~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
|+|||+||.. ...+....+++|+.++.++.++ +++. +.++|++||...+.+
T Consensus 88 d~lv~~Ag~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 146 (267)
T 2gdz_A 88 DILVNNAGVN-------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-------------- 146 (267)
T ss_dssp CEEEECCCCC-------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--------------
T ss_pred CEEEECCCCC-------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC--------------
Confidence 9999999965 2345667888999876655544 4443 236888888765521
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhcc-----CeeEeEEeeeecCCCCChhhHHHHhhcc---cc-------e--eecCCC
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISRY---NK-------V--VNIPNS 567 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~~~~~~~~~---~~-------~--~~~~~~ 567 (668)
.+....|+.||...|.+.+.+. ...++++..++|+.+.++.. ..+... .. . ......
T Consensus 147 ----~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (267)
T 2gdz_A 147 ----VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL--ESIEKEENMGQYIEYKDHIKDMIKYYG 220 (267)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH--HGGGCHHHHGGGGGGHHHHHHHHHHHC
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhh--hccccccccchhhhHHHHHHHHhcccc
Confidence 1233579999999999887631 23689999999999988741 111100 00 0 001124
Q ss_pred cccHhhHHHHHHHHHhcc--CCceeeecCCCccCHHHH
Q 005949 568 MTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHNEI 603 (668)
Q Consensus 568 ~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~e~ 603 (668)
+++.+|+|++++.++... .+.+|++.+++.+++.|+
T Consensus 221 ~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 221 ILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp CBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred CCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 678999999999999764 567999999888776553
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=149.80 Aligned_cols=198 Identities=14% Similarity=0.083 Sum_probs=142.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vi 436 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|+||
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 90 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI 90 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 479999999999999999999999864 23567999999999988876 789999
Q ss_pred EcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||....... +...++....+++|+.++.++++++.. .+ .++|++||...+. +.+
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~ 152 (267)
T 3t4x_A 91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM------------------PSQ 152 (267)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS------------------CCT
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc------------------CCC
Confidence 99997721111 112334455689999998888777643 34 3788888876541 123
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhcccc---------------eeecCCCccc
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNK---------------VVNIPNSMTV 570 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~---------------~~~~~~~~~~ 570 (668)
....|+.||...+.+.+.+. ...++++..+.|+.+..+. .++........ .......+..
T Consensus 153 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 232 (267)
T 3t4x_A 153 EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIR 232 (267)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBC
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccC
Confidence 34789999999999988764 2358999999999988874 22222111100 0001235778
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCCCccC
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
.+|+|++++.++... .+.++++.+|...|
T Consensus 233 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 233 PEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp THHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred HHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 999999999998743 46789999887655
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=153.35 Aligned_cols=172 Identities=16% Similarity=0.086 Sum_probs=124.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCC-----CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIP-----SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+++||||||+|+||++++++|+++| ++|+++.|.... ........ .....++.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G--~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDP--SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCT--TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 5789999999999999999999995 445554443211 11111000 01124688999999999999988854
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|+|||+||..... ...+++...+++|+.++.++++++ ++.+ ..++|++||...+....
T Consensus 80 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~-------- 150 (327)
T 1jtv_A 80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP-------- 150 (327)
T ss_dssp TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT--------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCC--------
Confidence 3699999999975422 223345678999999999999886 3334 68999999987654321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQ 194 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~ 194 (668)
....|+.+|...+.+.+.++.+ .++++++++||.|..+..
T Consensus 151 ------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~ 193 (327)
T 1jtv_A 151 ------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM 193 (327)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred ------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHH
Confidence 2347999999999999988764 589999999999988753
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.4e-15 Score=145.40 Aligned_cols=217 Identities=14% Similarity=0.123 Sum_probs=142.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-c--CCCccCCccccCCCcCCCCeEEEEccCCCHHHH-HHHhcc-CC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-D--KLDYCSNLKNLIPSKASSNFKFVKGDIASADLV-NFLLIT-ES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~-~~~~~~-~~ 80 (668)
+|++|||||+|+||+++++.|+++ +++|+++ + |... .+..+.... .+.... |..+.+.+ +++.+. .+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~--~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g~ 72 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAA--ERQRFESEN--PGTIAL--AEQKPERLVDATLQHGEA 72 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHH--HHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHH--HHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999 6889998 5 7532 111111111 122222 55554433 333322 36
Q ss_pred CCEEEEcCccCCc-------ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 81 IDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 81 ~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
+|+|||+||.... ....+++...+++|+.++.++++++. +.+ ..++|++||...+....
T Consensus 73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------- 142 (244)
T 1zmo_A 73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLA--------- 142 (244)
T ss_dssp EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT---------
T ss_pred CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCC---------
Confidence 8999999997543 12233456789999999999988775 333 57999999987765432
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC-CChH-HHHHHHHHc-CCCceeecCCCceE
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP-EKLI-PKFILLAMR-GLPLPIHGDGSNVR 223 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~-~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ 223 (668)
+...|+.+|...+.+.+.++.+ .++++.+++||.|..+.... .... ......... ..+ ..
T Consensus 143 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p---------~~ 208 (244)
T 1zmo_A 143 -----YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP---------LG 208 (244)
T ss_dssp -----TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT---------TC
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC---------CC
Confidence 2456999999999999988765 38999999999998764300 0000 011111111 111 11
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.+...+|+|++++.++.... .|+.+.+.+|.
T Consensus 209 r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 209 RLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY 242 (244)
T ss_dssp SCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence 35689999999999887542 46788887663
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=8.6e-16 Score=151.24 Aligned_cols=192 Identities=16% Similarity=0.032 Sum_probs=136.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhh------cCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQS------VKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~------~~~d 433 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|++++.++++. -++|
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 101 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 101 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 579999999999999999999999864 2356799999888877753 2689
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||.... +..+...++....+++|+.++.++++++. +.+ .++|++||...+.+
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------------- 164 (273)
T 1ae1_A 102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA----------------- 164 (273)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC-----------------
Confidence 99999997621 11122344556778899999999999884 334 37888888766521
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HHH----------HhhcccceeecCCCcccHh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FIT----------KISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~~----------~~~~~~~~~~~~~~~~~v~ 572 (668)
.++...|+.||...|.+.+.+.. ..++++..++|+.++++.. ... .+... .....+...+
T Consensus 165 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----~p~~r~~~p~ 239 (273)
T 1ae1_A 165 -LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK----TPMGRAGKPQ 239 (273)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH----STTCSCBCHH
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc----CCCCCCcCHH
Confidence 12346899999999999887643 3489999999999988741 110 01100 0112467899
Q ss_pred hHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|+|++++.++... .+.++++.+|..
T Consensus 240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 240 EVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 9999999998643 466888888744
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=152.46 Aligned_cols=194 Identities=12% Similarity=-0.019 Sum_probs=143.9
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+| +||+++++.|+++|++| .++.+|++|+++++++++.. ++|
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 110 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLD 110 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999998 99999999999999865 24678999999998888765 789
Q ss_pred EEEEcccccC-----CCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTG-----RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 434 ~Vih~a~~~~-----~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
+|||+||... .+..+...++....+++|+.++.++++++... +.++|++||...+.
T Consensus 111 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~---------------- 174 (296)
T 3k31_A 111 FVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK---------------- 174 (296)
T ss_dssp EEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----------------
T ss_pred EEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc----------------
Confidence 9999999762 11123344566778999999999999999764 33788888876542
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+.+..+.|+.||...+.+.+.+.. ..++++..+.|+.+..+.. +...+.... ....+...+|+
T Consensus 175 --~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----p~~r~~~pedv 248 (296)
T 3k31_A 175 --VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNS----PLRRNTTLDDV 248 (296)
T ss_dssp --CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHS----TTSSCCCHHHH
T ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcC----CCCCCCCHHHH
Confidence 122346899999999999888643 2489999999999987641 111111111 11245678999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCccC
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
|++++.++... .+.++++.+|..++
T Consensus 249 A~~v~fL~s~~a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 249 GGAALYLLSDLGRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHcCCccCCccCCEEEECCCcccc
Confidence 99999999753 46689998875543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.65 E-value=8e-16 Score=151.37 Aligned_cols=194 Identities=15% Similarity=0.044 Sum_probs=139.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~ 112 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI 112 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999854 34568999999998888865 7899
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc------CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH------GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
|||+||....... +...++....+++|+.|+.++++++... +.+++++||...+...
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------------- 176 (276)
T 3r1i_A 113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------------- 176 (276)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------------
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC----------------
Confidence 9999997721111 1223444566789999999999988643 2467888886543211
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh-----HHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN-----FITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
+..+.+.|+.||...+.+.+.+.. ..++++..++|+.+..+.. +........ ....+...+|+|++++
T Consensus 177 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~----p~~r~~~pedvA~~v~ 252 (276)
T 3r1i_A 177 IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKI----PLGRMGRPEELTGLYL 252 (276)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGS----TTSSCBCGGGSHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcC----CCCCCcCHHHHHHHHH
Confidence 112346799999999999888643 2589999999999987741 111111111 1124667999999999
Q ss_pred HHHhcc----CCceeeecCCCc
Q 005949 580 EMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~~ 597 (668)
.++... .+.++++.+|..
T Consensus 253 fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 253 YLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHcCccccCccCcEEEECcCcc
Confidence 998753 466888887643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-16 Score=152.61 Aligned_cols=182 Identities=14% Similarity=0.056 Sum_probs=132.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc-----CCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~ 440 (668)
++++||||+|+||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+|||+||
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 96 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG 96 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 579999999999999999999999865 34568999999988888754 6799999999
Q ss_pred ccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 441 VTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
...... .....++....+++|+.|+.++++++. +.+ .++|++||...+.+ .+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------------------~~~~~~ 158 (266)
T 3p19_A 97 MMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT------------------FPDHAA 158 (266)
T ss_dssp CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC------------------CTTCHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC------------------CCCCch
Confidence 762111 112234455678999999999888764 334 47888888765521 223468
Q ss_pred chhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--H----HHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 515 YSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--F----ITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~----~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|+.||...+.+.+.+.. ..++++..++|+.+..+.. + ....... .......+.+.+|+|++++.++.++
T Consensus 159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~r~~~pedvA~av~~l~~~~ 236 (266)
T 3p19_A 159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDA--WRVDMGGVLAADDVARAVLFAYQQP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHH--HHHHTTCCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHh--hcccccCCCCHHHHHHHHHHHHcCC
Confidence 99999999998887643 3589999999999987741 0 0000000 0001234778999999999999875
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=5.3e-16 Score=152.62 Aligned_cols=188 Identities=13% Similarity=-0.002 Sum_probs=137.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC---Ccc-----------------------cccccccCChhHHHHHhhhc------
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG---IPF-----------------------EYGKGRLEDCSSLIADVQSV------ 430 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g---~~v-----------------------~~~~~D~~d~~~~~~~l~~~------ 430 (668)
|++|+||||+|+||+++++.|+++| ++| .++.+|++|++++.++++.+
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 100 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 100 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999 643 34568999999888888754
Q ss_pred -CCCEEEEcccccC--CCCccccccccccceehhhhhhHHHHHHHHHc----------------CCcEEEEecceeEeec
Q 005949 431 -KPTHVFNAAGVTG--RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH----------------GILMMNYATGCIFEYD 491 (668)
Q Consensus 431 -~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----------------~~~~v~~sS~~vy~~~ 491 (668)
++|+|||+||... .+.......+....+++|+.++.++++++... +.++|++||...+...
T Consensus 101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 180 (267)
T 1sny_A 101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 180 (267)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence 5899999999762 00112234455678899999999999998654 3578899987765321
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCe---eEeEEeeeecCCCCChhhHHHHhhcccceeecCCCc
Q 005949 492 AAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNV---CTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSM 568 (668)
Q Consensus 492 ~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~ 568 (668)
. +..+...|+.||...|.+++.+... .++++..++|+.+..+.. . ...+
T Consensus 181 ~---------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~-------~~~~ 232 (267)
T 1sny_A 181 N---------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG------G-------SSAP 232 (267)
T ss_dssp C---------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT------C-------TTCS
T ss_pred C---------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC------C-------CCCC
Confidence 1 1124467999999999998886432 589999999998876532 0 0134
Q ss_pred ccHhhHHHHHHHHHhcc---CCceeeecCCCcc
Q 005949 569 TVLDELLPISIEMAKRN---LRGIWNFTNPGVV 598 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~---~~g~~ni~~~~~~ 598 (668)
...+|+|+.++.++... ..|.|...++..+
T Consensus 233 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 233 LDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp BCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred CCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence 66899999999998753 4455544444433
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-16 Score=154.33 Aligned_cols=193 Identities=12% Similarity=0.044 Sum_probs=138.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCCh----hHHHHHhhhc---
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDC----SSLIADVQSV--- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~----~~~~~~l~~~--- 430 (668)
++++||||+|+||+++++.|+++|++|. ++.+|++|+ ++++++++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 91 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 91 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence 4799999999999999999999998652 234689998 8888777754
Q ss_pred --CCCEEEEcccccCCCC-ccccc-----------cccccceehhhhhhHHHHHHHHHc---C-------CcEEEEecce
Q 005949 431 --KPTHVFNAAGVTGRPN-VDWCE-----------SHKTDTIRTNVAGTLTLADVCRDH---G-------ILMMNYATGC 486 (668)
Q Consensus 431 --~~d~Vih~a~~~~~~~-~~~~~-----------~~~~~~~~~Nv~~~~~ll~~~~~~---~-------~~~v~~sS~~ 486 (668)
++|+|||+||...... ..... .+....+++|+.++.++++++... + .++|++||..
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~ 171 (276)
T 1mxh_A 92 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 171 (276)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred cCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchh
Confidence 6899999999762111 11122 344567899999999999999873 2 4678888876
Q ss_pred eEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh----HHHHhhccc
Q 005949 487 IFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN----FITKISRYN 559 (668)
Q Consensus 487 vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~----~~~~~~~~~ 559 (668)
.+.+ .++...|+.||...+.+.+.+.. ..++++..++|+.++++.. +...+...
T Consensus 172 ~~~~------------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~- 232 (276)
T 1mxh_A 172 TDLP------------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRK- 232 (276)
T ss_dssp GGSC------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTT-
T ss_pred hcCC------------------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCCccCCHHHHHHHHhc-
Confidence 5521 12346899999999999887643 2489999999999988721 11122111
Q ss_pred ceeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 560 KVVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 560 ~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
......+.+.+|+|++++.++... .+.+|++.+|..
T Consensus 233 --~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 233 --VPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp --CTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 111222788999999999998753 356888887643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 668 | ||||
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-97 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-15 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-84 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 7e-11 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-80 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-13 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 7e-71 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-07 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-65 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-12 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 5e-63 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 3e-57 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 9e-57 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-05 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-56 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-06 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 7e-56 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 4e-10 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 5e-52 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 1e-04 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 1e-49 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 0.001 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-49 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 4e-49 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 5e-08 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 2e-44 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-42 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 8e-30 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 5e-25 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 5e-24 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 3e-21 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 2e-17 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 4e-16 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 2e-08 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-16 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-14 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 3e-12 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 7e-04 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 6e-10 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 4e-09 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 6e-08 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 1e-06 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 3e-05 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 6e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-04 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-04 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 0.001 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.002 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 0.002 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 0.002 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 0.003 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 0.003 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 0.003 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 300 bits (769), Expect = 5e-97
Identities = 134/344 (38%), Positives = 186/344 (54%), Gaps = 23/344 (6%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITG AGFI S V +I+N + +V +DKL Y NL++L S+ + F DI
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG----- 122
+ + + D +MH AA++HVD S F + NI GT+ LLE +
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 123 ---QIRRFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMA 172
RF H+STDEVYG+ V N E + P++PYSA+KA ++ LV A
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 173 YGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVA 232
+ R+YGLP I T +N YGP FPEKLIP IL A+ G PLPI+G G +R +LY ED A
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240
Query: 233 EAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM------DPETSIKFVENRPFN 286
A ++ +G+ G YN+G E++ +DV IC L I +V +RP +
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 287 DQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWWGDV 329
D+RY +D K++ LGW +E G+RKT+EWY N W +V
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNV 344
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 75.2 bits (184), Expect = 3e-15
Identities = 47/339 (13%), Positives = 92/339 (27%), Gaps = 69/339 (20%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEG-------------------------IPFEYGKGRLE 418
MK LI G G+IG + + K + + +
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 419 DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478
D + + + +P V + A + VD + I TN+ GT L +V R +
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESH---VDRSITGPAAFIETNIVGTYALLEVARKYWSA 117
Query: 479 MMNYATGCI-------------FEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525
+ + + E T S YS +KA + L
Sbjct: 118 LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177
Query: 526 LKEYD-----NVCTLRVRMPISSDLNNPRNFITKISR---YNKVVNIPNSMT-------V 570
++ + + P I + K + I V
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGPY-HFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236
Query: 571 LDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIV 630
D + + + + +N L++ + + V + ++
Sbjct: 237 EDHARALHMVVTEGKAGETYNIGGHNEKK---NLDVVFTICDLLDEIVPKATSYREQITY 293
Query: 631 APRSNNE-----MDASKLKKEF---PELLSIKDSLIKYV 661
+DA K+ +E P + + + K V
Sbjct: 294 VADRPGHDRRYAIDAGKISRELGWKPL-ETFESGIRKTV 331
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 265 bits (677), Expect = 6e-84
Identities = 121/324 (37%), Positives = 178/324 (54%), Gaps = 12/324 (3%)
Query: 8 NILITGAAGFIASHVCNRLIRN----YPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVK 63
+L+TG AGFI SH +L+ P +++VLD L Y N NL P A +FV
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 64 GDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 123
GDI D +D I+HFAA++HVD S + FT+ N+ GT LL+ G
Sbjct: 62 GDIR--DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV 119
Query: 124 IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
R +HVST++VYG D + E+S L P +PY+A+KAG++++ AY R+YGL V
Sbjct: 120 -GRVVHVSTNQVYGSIDSGSW---TESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243
TR N YGP Q PEKLIP F+ + G LP++GDG+NVR +++ +D +L G
Sbjct: 176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR 235
Query: 244 VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL-TSLGW 302
G +Y++G E ++ + D S++ V +R +D RY LD K+ LG+
Sbjct: 236 AGEIYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDLRYSLDGGKIERELGY 294
Query: 303 SERTIWEEGLRKTIEWYTQNPDWW 326
+ + +GL +T+ WY +N WW
Sbjct: 295 RPQVSFADGLARTVRWYRENRGWW 318
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 61.8 bits (149), Expect = 7e-11
Identities = 47/326 (14%), Positives = 99/326 (30%), Gaps = 66/326 (20%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEGIP------------------------------FEYG 413
M+ L+ G G+IG + P +
Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 414 KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCR 473
G + D L +++ V F A R TNV GT TL
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASV-----FTETNVQGTQTLLQCAV 115
Query: 474 DHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD--- 530
D G+ + + + + + + E S Y+ +KA + + + Y
Sbjct: 116 DAGVGRVVHVS-----TNQVYGSIDSGSWTESSPLEPN-SPYAASKAGSDLVARAYHRTY 169
Query: 531 --NVCTLRVRMPISSDLNNPR---NFITKISRYNKVVNIPNS-------MTVLDELLPIS 578
+V R + + F+T + + + + D I+
Sbjct: 170 GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLD-GGTLPLYGDGANVREWVHTDDHCRGIA 228
Query: 579 IEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEM 638
+ +A I++ +++ E+ + + ++ V + + + +
Sbjct: 229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDL-----RYSL 283
Query: 639 DASKLKKEF---PELLSIKDSLIKYV 661
D K+++E P+ +S D L + V
Sbjct: 284 DGGKIERELGYRPQ-VSFADGLARTV 308
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 256 bits (655), Expect = 1e-80
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 20/324 (6%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K ILITG AGF+ SH+ ++L+ + +++ V+D + +N+ NF+ + D+
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDG--HEVTVVDNF-FTGRKRNVEHWIGHENFELINHDV 58
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ +D I H A+ N N + K N GT +L K G R
Sbjct: 59 VEPLYIE-------VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--R 109
Query: 127 FIHVSTDEVYGETDEDAVVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
+ ST EVYG+ + ++ + + P Y K AE + AY + G+ V
Sbjct: 110 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 169
Query: 185 RGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
R N +GP +++ FIL A++G PL ++G GS R++ Y D+ +++
Sbjct: 170 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS- 228
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LG 301
V N+G +E +++ A+ I L E I+F+ + Q+ D +K LG
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLG 286
Query: 302 WSERTIWEEGLRKTIEWYTQNPDW 325
W EEGL K I ++ + ++
Sbjct: 287 WEPVVPLEEGLNKAIHYFRKELEY 310
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.1 bits (171), Expect = 1e-13
Identities = 49/314 (15%), Positives = 107/314 (34%), Gaps = 52/314 (16%)
Query: 385 KFLIYGRTGWIGGLLGKLCEKEG----------------IPFEYGKGRLEDCSSLIADVQ 428
+ LI G G++G L +G + G E + + +
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62
Query: 429 SVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIF 488
++ +++ A + T++TN GTL + + + G ++ +T ++
Sbjct: 63 YIEVDQIYHLASPAS---PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVY 119
Query: 489 EYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISS 543
HP+ Y P + Y + K + E + Y V R+
Sbjct: 120 GDPEVHPQSE--DYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 177
Query: 544 --DLNNPR---NFITKISRYNKVVNIPNSMTVL------DELLPISIEMAKRNLRGIWNF 592
+N+ R NFI + + + + + S + +L+ + + N+ N
Sbjct: 178 RMHMNDGRVVSNFILQALQ-GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNL 236
Query: 593 TNPGVVSHNEILEMYKKYIN--PEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEF--- 647
NP + E ++ K + E ++++ ++ K D K K
Sbjct: 237 GNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRK--------PDIKKAKLMLGWE 288
Query: 648 PELLSIKDSLIKYV 661
P + +++ L K +
Sbjct: 289 PV-VPLEEGLNKAI 301
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 231 bits (590), Expect = 7e-71
Identities = 123/331 (37%), Positives = 183/331 (55%), Gaps = 17/331 (5%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + + V GDI
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDI 61
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A A+LV+ + D I+H+AA++H DNS + F N GT+ LLEA + R
Sbjct: 62 ADAELVDK--LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK--YDIR 117
Query: 127 FIHVSTDEVYGET--DEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAYGRSY 177
F HVSTDEVYG+ ED + P++PYS+TKA ++++V A+ RS+
Sbjct: 118 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
G+ + +N YGP Q EK IP+ I + G+ ++G+G NVR +++ D +
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL 297
IL KG +G Y +G E+ +V + I + P+ + V +R +D RY +D KL
Sbjct: 238 ILTKGRMGETYLIGADGEKNNKEVLELILE-KMGQPKDAYDHVTDRAGHDLRYAIDASKL 296
Query: 298 TS-LGWS-ERTIWEEGLRKTIEWYTQNPDWW 326
LGW+ + T + EGL +TI+WYT N DWW
Sbjct: 297 RDELGWTPQFTDFSEGLEETIQWYTDNQDWW 327
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 51.5 bits (122), Expect = 2e-07
Identities = 53/320 (16%), Positives = 98/320 (30%), Gaps = 47/320 (14%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE----------YGKGRLEDCSSL--------IA 425
++ G G+IG K LE IA
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62
Query: 426 DVQSVKPTHVFNAAGVT--GRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYA 483
D + V A V + D + + I TN GT TL + R + I + +
Sbjct: 63 DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 122
Query: 484 TGCIF-----EYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 538
T ++ D +T S YS TKA + ++K + ++
Sbjct: 123 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKAT 182
Query: 539 MPISSDLNNPRNFIT--------------KISRYNKVVNIPNSMTVLDELLPISIEMAKR 584
+ S+ P I K Y + N+ + + D + + K
Sbjct: 183 ISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 242
Query: 585 NLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLK 644
+ + G ++ E+LE+ + + + + + +DASKL+
Sbjct: 243 RMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDL-----RYAIDASKLR 297
Query: 645 KEF---PELLSIKDSLIKYV 661
E P+ + L + +
Sbjct: 298 DELGWTPQFTDFSEGLEETI 317
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 217 bits (554), Expect = 2e-65
Identities = 68/354 (19%), Positives = 123/354 (34%), Gaps = 47/354 (13%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL-----IPSKASSNFKF 61
K LITG G S++ L+ Y++ + + N + + P + F
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKG--YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL 59
Query: 62 VKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
GD++ + +L D + + A +HV SF + + GT LLEA +
Sbjct: 60 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL 119
Query: 122 G--QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
G + RF ST E+YG E E + P +PY+ K A + + Y SYG+
Sbjct: 120 GLEKKTRFYQASTSELYGLVQEIPQ---KETTPFYPRSPYAVAKLYAYWITVNYRESYGM 176
Query: 180 PVITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIH-GDGSNVRSYLYCEDVAEAF 235
N P + F + I + I +GL ++ G+ ++R + + +D +
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236
Query: 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSM------------------------ 271
+L + + + + T + V + +
Sbjct: 237 WMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAP 295
Query: 272 -----DPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
D ++ RP + D K LGW E + + +
Sbjct: 296 GVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND 349
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 66.8 bits (162), Expect = 2e-12
Identities = 37/240 (15%), Positives = 70/240 (29%), Gaps = 29/240 (12%)
Query: 410 FEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLA 469
F G L D S+L ++ V+P V+N ++ V T + GTL L
Sbjct: 57 FHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSH---VAVSFESPEYTADVDAMGTLRLL 113
Query: 470 DVCRDHGILMMNYATGCIFEY---DAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELL 526
+ R G+ F + I KE S Y+ K +
Sbjct: 114 EAIRFLGL-----EKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPYAVAKLYAYWIT 167
Query: 527 KEYD-----NVCTLRV------RMPISSDLNNPRNFITKISRYNKVVNIPN------SMT 569
Y C + R + I I++ +
Sbjct: 168 VNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG 227
Query: 570 VLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVI 629
+ + + M ++ + S + +EM + + ++ +EE+ V+
Sbjct: 228 HAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVV 287
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 210 bits (535), Expect = 5e-63
Identities = 87/344 (25%), Positives = 148/344 (43%), Gaps = 30/344 (8%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDI 66
+L+TG +G+I SH C +L++N + +++LD L ++ +I + FV+GDI
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNG--HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKN 118
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTR 185
FI S+ VYG+ + V + P +PY +K E ++ ++ + R
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPT--GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLR 176
Query: 186 GNNVYGPN----------QFPEKLIPKFILLAM-RGLPLPIHG------DGSNVRSYLYC 228
N G + P L+P +A+ R L I G DG+ VR Y++
Sbjct: 177 YFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236
Query: 229 EDVAEAFECILHKGEV---GHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPF 285
D+A+ + K H+YN+G V+DV K + F R
Sbjct: 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKA--CGKPVNYHFAPRREG 294
Query: 286 NDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWWGD 328
+ Y+ D K L W +E + T W +++P + D
Sbjct: 295 DLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD 338
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 195 bits (496), Expect = 3e-57
Identities = 84/350 (24%), Positives = 127/350 (36%), Gaps = 36/350 (10%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKG 64
K +L+TG AG+I SH LI N Y VV D L + ++ L + F +
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARL-EVLTKHHIPFYEV 58
Query: 65 DIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
D+ + + ID+++HFA V S + NNI GT VLLE + +
Sbjct: 59 DLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ-QYNV 117
Query: 125 RRFIHVSTDEVYGE-TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS--YGLPV 181
+F+ S+ VYG+ T ++ E L PTNPY TK E ++ S
Sbjct: 118 SKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKF 177
Query: 182 ITTRGNNVY----------GPNQFPEKLIPKFILLAM-RGLPLPIHGDGSNVRSYLYCED 230
R N P P L+P +A+ R L I GD + R D
Sbjct: 178 AILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 237
Query: 231 VAEAFECILH-------------KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSI 277
+ + +N+G+ K V +V CK +D
Sbjct: 238 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP--Y 295
Query: 278 KFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWW 326
K R + + L W E+ + +W T+NP +
Sbjct: 296 KVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGY 345
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 194 bits (492), Expect = 9e-57
Identities = 84/329 (25%), Positives = 138/329 (41%), Gaps = 23/329 (6%)
Query: 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-----NLKNLIPSKASSNFK 60
PK LITG AGFI S++ L++ + K+V LD +++L+ K SNFK
Sbjct: 16 PKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
F++GDI + D N +D ++H AA V S + NI G +L A +
Sbjct: 74 FIQGDIRNLDDCNN--ACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
+ F + ++ YG+ V E + P +PY+ TK E+ + R YG
Sbjct: 132 AKV-QSFTYAASSSTYGDHPGLPKV---EDTIGKPLSPYAVTKYVNELYADVFSRCYGFS 187
Query: 181 VITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFE 236
I R NV+G Q P +IPK+ ++G + I+GDG R + Y E+ +A
Sbjct: 188 TIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL 247
Query: 237 CILHKGEVGH--VYNVGTKKERRVIDVAKDICKLFSMDP---ETSIKFVENRPFNDQRYF 291
G VYN+ + + + + + + + R + +
Sbjct: 248 LAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSL 307
Query: 292 LDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
D K LG++ + G+ + WY
Sbjct: 308 ADISKAAKLLGYAPKYDVSAGVALAMPWY 336
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 36/245 (14%), Positives = 64/245 (26%), Gaps = 43/245 (17%)
Query: 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYA-TGCIFEYDAAHPEGSGIGYKE 504
+V + + TN+ G L + RD + YA + + P K
Sbjct: 103 SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP-------KV 155
Query: 505 EDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLR---VRMPISSDLNNPRNFITKIS 556
EDT S Y+ TK + E + + LR V I K +
Sbjct: 156 EDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWT 215
Query: 557 R---YNKVVNIPNSMTVLDELLPIS---------IEMAKRNLRGIWNFTNPGVVSHNEIL 604
V I + I ++N G S N++
Sbjct: 216 SSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLF 275
Query: 605 EMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNE-----MDASKLKKEF---PELLSIKDS 656
+ + + + + + D SK K P+ +
Sbjct: 276 FALRDGLAENGVSYHR------EPVYRDFREGDVRHSLADISKAAKLLGYAPK-YDVSAG 328
Query: 657 LIKYV 661
+ +
Sbjct: 329 VALAM 333
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (491), Expect = 1e-56
Identities = 74/352 (21%), Positives = 127/352 (36%), Gaps = 41/352 (11%)
Query: 7 KNI-LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL------IPSKASSNF 59
+N+ LITG G S++ L+ Y++ + + N + + N
Sbjct: 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNM 58
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
K GD+ + + ++ I + AQ+HV SF + + GT LL+A K
Sbjct: 59 KLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118
Query: 120 VTGQIR--RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
G I +F ST E+YG+ E + E + P +PY A K A +V+ + +Y
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQE---IPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 175
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMR----GLPLPIHGDGSNVRSYLYCEDVAE 233
L + N P + + K + L G+ R + + +D E
Sbjct: 176 NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235
Query: 234 AFECILHKGEVG-------HVYNVGTKKERRVIDVAKDICKLFSMDPET----------- 275
A +L E V++V E+ + + K I + E
Sbjct: 236 AMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV 295
Query: 276 SIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTI----EWYTQN 322
++ RP D K L W R ++E +R+ + E N
Sbjct: 296 TVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN 347
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 46/288 (15%), Positives = 81/288 (28%), Gaps = 23/288 (7%)
Query: 389 YGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVD 448
TG I L + G L D + L+ + VKPT ++N + V
Sbjct: 37 SFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSH---VK 93
Query: 449 WCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508
T + GTL L D + G+ +N + + I KE
Sbjct: 94 ISFDLAEYTADVDGVGTLRLLDAVKTCGL--INSVKFYQASTSELYGKVQEIPQKETTPF 151
Query: 509 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---NFITKISRYNKVVNIP 565
S Y K ++ + L I + +PR NF+T+ +
Sbjct: 152 YPR-SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYL 210
Query: 566 N--------------SMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYI 611
+ + M + + + V S E +E +I
Sbjct: 211 GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHI 270
Query: 612 NPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKDSLIK 659
W E + + + +D + + L + K
Sbjct: 271 GKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAK 318
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 190 bits (484), Expect = 7e-56
Identities = 61/337 (18%), Positives = 123/337 (36%), Gaps = 46/337 (13%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ + I G G + S + +L + +VL D + ++
Sbjct: 3 QRVFIAGHRGMVGSAIRRQLEQRG--DVELVLRTRD--------------------ELNL 40
Query: 67 ASADLVNFLLITESIDTIMHFAAQT-HVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ V+ +E ID + AA+ + + +F N+ ++ A +
Sbjct: 41 LDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VN 99
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLL--PTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
+ + + + +Y + + + + L PY+ K L +Y R YG +
Sbjct: 100 KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS 159
Query: 184 TRGNNVYGPNQFPEKLIPKFILLAM---------RGLPLPIHGDGSNVRSYLYCEDVAEA 234
N+YGP+ I + + + + G G+ +R +L+ +D+A A
Sbjct: 160 VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA 219
Query: 235 FECILH---------KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPF 285
++ + NVGT + + ++A+ I K+ + F ++P
Sbjct: 220 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPD 277
Query: 286 NDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQN 322
R LD +L LGW E GL T +W+ +N
Sbjct: 278 GTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN 314
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 59.1 bits (142), Expect = 4e-10
Identities = 38/272 (13%), Positives = 85/272 (31%), Gaps = 13/272 (4%)
Query: 385 KFLIYGRTGWIGGLLGKLCEKEG----IPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAG 440
+ I G G +G + + E+ G + + L D ++ S + V+ AA
Sbjct: 4 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAA 63
Query: 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYA-TGCIFEYDAAHPEGSG 499
G + ++ D I N+ + + + + + + CI+ A P
Sbjct: 64 KVG--GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAES 121
Query: 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-NFITKISRY 558
+ T T Y+ K +L + Y+ R + ++L P NF S
Sbjct: 122 --ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHV 179
Query: 559 NKVVNIPNSMTVLDELLPISIE---MAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEF 615
+ + + + R + + + E++ + P
Sbjct: 180 IPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPML 239
Query: 616 KWVNFTLEEQAKVIVAPRSNNEMDASKLKKEF 647
+N + ++ ++ K + F
Sbjct: 240 SHINVGTGVDCTIRELAQTIAKVVGYKGRVVF 271
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 180 bits (457), Expect = 5e-52
Identities = 67/323 (20%), Positives = 115/323 (35%), Gaps = 13/323 (4%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
++ L+TG G +++ L+ Y++ L L + ++ GD+
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM 58
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
A A V +I + + AAQ+ V S+ + G LLEA + R
Sbjct: 59 ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR 118
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F ST E++G E + P +PY K + + Y S+GL +
Sbjct: 119 FYQASTSEMFGLIQA---ERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGIL 175
Query: 187 NNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242
N P + E K+ + + G+ R + + D EA +L +
Sbjct: 176 FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235
Query: 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIK--FVENRPFNDQRYFLDDQKLTS- 299
+ Y V T V D+ + + +D +K RP + K
Sbjct: 236 KADD-YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRV 294
Query: 300 LGWSERTIWEEGLRKTIEWYTQN 322
LGW RT +E +R +E +
Sbjct: 295 LGWKPRTSLDELIRMMVEADLRR 317
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 30/283 (10%), Positives = 79/283 (27%), Gaps = 33/283 (11%)
Query: 399 LGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTI 458
L +L + I +E G D + + ++V + + V + T
Sbjct: 42 LRELGIEGDIQYEDG-----DMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTG 96
Query: 459 RTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518
+ G L + R Y + ++E+TP + S Y
Sbjct: 97 VVDGLGVTHLLEAIRQFSPETRFYQAST-----SEMFGLIQAERQDENTPFYPRSPYGVA 151
Query: 519 KAMVEELLKEYDNVCTLRVRM--------PISSDLNNPRNFITKISRY----NKVVNIPN 566
K + Y L P+ R ++R + + + N
Sbjct: 152 KLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGN 211
Query: 567 -----SMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFT 621
+ + M +++ + + ++ ++ +++ +++
Sbjct: 212 VDAKRDWGFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKI 271
Query: 622 LEEQAKVIVAPRSNNEMDASKLKKEF---PELLSIKDSLIKYV 661
+ + +K ++ P S+ + + V
Sbjct: 272 DPAFFRPAEVDVLL--GNPAKAQRVLGWKPR-TSLDELIRMMV 311
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 174 bits (441), Expect = 1e-49
Identities = 79/337 (23%), Positives = 138/337 (40%), Gaps = 30/337 (8%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
+LITG GF+ S++ + + ++V D L NL + NF+FV GDI +
Sbjct: 3 LLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ V L+ D+ H A Q + S N + N+ GT LLEA + I
Sbjct: 61 KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120
Query: 129 HVSTDEVYG-------------ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
+ ST++VYG T D G E++QL +PY +K A+ ++ Y R
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180
Query: 176 SYGLPVITTRGNNVYGPNQ--------FPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227
+GL + R +++YG Q + P I G+G VR L+
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240
Query: 228 CEDVAEAFECILHKGEVG----HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR 283
ED+ + L ++++ K + ++D + R
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVR 298
Query: 284 PFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
+ + + D +K+T+ + WS + ++G++K +W
Sbjct: 299 ESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWT 335
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 39.3 bits (90), Expect = 0.001
Identities = 49/336 (14%), Positives = 91/336 (27%), Gaps = 64/336 (19%)
Query: 385 KFLIYGRTGWIGGLLGKLCEKEGI------------------------PFEYGKGRLEDC 420
K LI G G++G L +GI FE+ G + +
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61
Query: 421 SSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH----- 475
+ + + P F+ AG + + + NV GTL L + R +
Sbjct: 62 NDVTRLITKYMPDSCFHLAG---QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118
Query: 476 ------GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529
+ + E + + +E T S Y +K ++ + +Y
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178
Query: 530 DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGI 589
+ L + S + R F T + P +I + +R
Sbjct: 179 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD- 237
Query: 590 WNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEE----------------QAKVIVAPR 633
+ + L K F + + P
Sbjct: 238 VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV 297
Query: 634 SNNE-----MDASKLKKEF---PELLSIKDSLIKYV 661
++ D K+ P+ +S KD + K
Sbjct: 298 RESDQRVFVADIKKITNAIDWSPK-VSAKDGVQKMY 332
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (440), Expect = 2e-49
Identities = 75/350 (21%), Positives = 122/350 (34%), Gaps = 36/350 (10%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-------ASSNF 59
+ +L+TG AG+I SH L+ Y VV+D +P +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 60 KFVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK 119
+F + DI + L S ++HFA V S ++ + N+ GT LLE K
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-G 178
G S + TNPY +K E ++ ++
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLP---LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKT 177
Query: 179 LPVITTRGNNVYGPN----------QFPEKLIPKFILLAM-RGLPLPIHG------DGSN 221
+ R N G + P L+P +A+ R L + G DG+
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 222 VRSYLYCEDVAE---AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIK 278
VR Y++ D+A+ A L + +YN+GT V+ + + + K K
Sbjct: 238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YK 295
Query: 279 FVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDWWG 327
V R + + + LGW+ + W QNP +G
Sbjct: 296 VVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 173 bits (439), Expect = 4e-49
Identities = 72/330 (21%), Positives = 128/330 (38%), Gaps = 24/330 (7%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
I ITGA GFIASH+ RL + ++ D KN ++ +F D+
Sbjct: 16 LKISITGAGGFIASHIARRLKHE--GHYVIASD------WKKNEHMTEDMFCDEFHLVDL 67
Query: 67 ASADLVNFLLITESIDTIM-HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
+ N L +TE +D + A + N NN + ++EA ++ G I+
Sbjct: 68 R--VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK 124
Query: 126 RFIHVSTDEVYGETDEDAV----VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPV 181
RF + S+ +Y E + + +A P + + K E L Y + +G+
Sbjct: 125 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIEC 184
Query: 182 ITTRGNNVYGPNQFPEKLIPKFILLAMR-----GLPLPIHGDGSNVRSYLYCEDVAEAFE 236
R +N+YGP + K R + GDG RS+ + ++ E
Sbjct: 185 RIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV- 243
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQK 296
L K + N+G+ + + ++A+ + + + I + R ++
Sbjct: 244 LRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF--EEKKLPIHHIPGPEGVRGRNSDNNLI 301
Query: 297 LTSLGWSERTIWEEGLRKTIEWYTQNPDWW 326
LGW+ +EGLR T W + +
Sbjct: 302 KEKLGWAPNMRLKEGLRITYFWIKEQIEKE 331
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.0 bits (126), Expect = 5e-08
Identities = 47/318 (14%), Positives = 97/318 (30%), Gaps = 52/318 (16%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEG------------------IPFEYGKGRLEDCSSLIA 425
+K I G G+I + + + EG E+ L + +
Sbjct: 16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK 75
Query: 426 DVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYAT 484
+ V A + + +S+ + + N + + + R +GI ++
Sbjct: 76 VTEGVDHVFNLAAD----MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 131
Query: 485 GCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLR--- 536
CI+ + + + P + K EEL K Y+ R
Sbjct: 132 ACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHN 191
Query: 537 VRMPISSDLNNPRNFITKISRYNKVVNIPN----------SMTVLDELLPISIEMAKRNL 586
+ P + R + S T +DE + + + K +
Sbjct: 192 IYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 251
Query: 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKE 646
R N + +VS NE+ EM + + + E + + D + +K++
Sbjct: 252 REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNS-------DNNLIKEK 304
Query: 647 F---PELLSIKDSLIKYV 661
P + +K+ L
Sbjct: 305 LGWAPN-MRLKEGLRITY 321
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 160 bits (404), Expect = 2e-44
Identities = 61/332 (18%), Positives = 106/332 (31%), Gaps = 14/332 (4%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL------IPSKASSNFK 60
K LITG G S++ L+ Y++ L + N + + + + K
Sbjct: 2 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK 59
Query: 61 FVKGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
D+ A + + D + + AAQ+HV SF G LLEA +
Sbjct: 60 LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 119
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
E E + P +PY+A+K A + Y +YGL
Sbjct: 120 HTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLF 179
Query: 181 VITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPI-HGDGSNVRSYLYCEDVAEAFE 236
N P + F + I + + GL + G+ R + + D EA
Sbjct: 180 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 239
Query: 237 CILHKGEVGHVYNVGTKKERRVIDVAKDICKLF-SMDPETSIKFVENRPFNDQRYFLDDQ 295
+L + + + + L + I RP D
Sbjct: 240 LMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDAS 299
Query: 296 KLTS-LGWSERTIWEEGLRKTIEWYTQNPDWW 326
K LGW + +E+ ++ ++ +
Sbjct: 300 KAKEVLGWKPQVGFEKLVKMMVDEDLELAKRE 331
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 155 bits (392), Expect = 2e-42
Identities = 75/380 (19%), Positives = 132/380 (34%), Gaps = 66/380 (17%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI---------------- 51
+L+ G AG+I SH L+R+ + +V++D L + +
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 52 -PSKASSNFKFVKGDIASADLVNFL-LITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIY 109
P A GD+ + D +N + ID ++H A V S + ++ NN+
Sbjct: 63 KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 110 GTHVLLEACKVTGQIRRFIHVSTDEVYGET---DEDAVVGNHEASQLLPTNPYSATKAGA 166
G LL+A + + S T ++ P +PY +K A
Sbjct: 123 GILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIA 182
Query: 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQ---------FPEKLIPKFILLAMRGL------ 211
E ++ +YG+ I R N G ++ LIP + M +
Sbjct: 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242
Query: 212 ----------PLPIHG------DGSNVRSYLYCEDVAEAFECILHK---------GEVGH 246
+PI G DG+ VR Y++ D+A A L +
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302
Query: 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSER 305
V+N+GT + V +V + K ++ R + K LGW +
Sbjct: 303 VFNLGTSRGYSVREVIEVARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPK 360
Query: 306 TIWEEGLRKT-IEWYTQNPD 324
E + +T ++ +P+
Sbjct: 361 YDTLEAIMETSWKFQRTHPN 380
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 119 bits (297), Expect = 8e-30
Identities = 63/329 (19%), Positives = 107/329 (32%), Gaps = 21/329 (6%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K + +TG GF + L K L S + + + + GDI
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA---RVADGMQSEIGDI 65
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ + + + + H AAQ V S+ E N+ GT LLEA + G ++
Sbjct: 66 RDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKA 125
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR---------SY 177
+++++D+ Y + +EA +PYS +K AE++ +Y +
Sbjct: 126 VVNITSDKCYDNKEWIWGYRENEAMG--GYDPYSNSKGCAELVTSSYRNSFFNPANYGQH 183
Query: 178 GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC 237
G V T R NV G + I IL A I + +R + + + +
Sbjct: 184 GTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL 243
Query: 238 ILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS------IKFVENRPFNDQRYF 291
+ K A + + + P
Sbjct: 244 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLK 303
Query: 292 LDDQKLTS-LGWSERTIWEEGLRKTIEWY 319
LD K LGW R L + W+
Sbjct: 304 LDCSKAKMQLGWHPRWNLNTTLEYIVGWH 332
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 104 bits (259), Expect = 5e-25
Identities = 54/333 (16%), Positives = 92/333 (27%), Gaps = 28/333 (8%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+L+TGA GF+ASHV +L+ + + + + K V D+
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
E I A V + E I GT L A T ++R
Sbjct: 72 L-----KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKR 126
Query: 127 FIHVSTDEVYGETDEDA-----------------VVGNHEASQLLPTNPYSATKAGAEML 169
F+ S+ + E+ Y+A+K AE+
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 170 VMAYGRSYGLPVI--TTRGNNVYGPNQFPEKL---IPKFILLAMRGLPLPIHGDGSNVRS 224
+ N G PE +++ G P +
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPPQY 245
Query: 225 YLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRP 284
Y+ D+ L ++ GT V KL+ + + +
Sbjct: 246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQD 305
Query: 285 FNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIE 317
+ + L SLG EE ++ +
Sbjct: 306 LSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 101 bits (251), Expect = 5e-24
Identities = 56/345 (16%), Positives = 111/345 (32%), Gaps = 33/345 (9%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
+LI G GFI +H+ RL+R Y++ LD + + +F FV+GDI+
Sbjct: 2 RVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSD--AISRFLNHP---HFHFVEGDIS 55
Query: 68 S-ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
++ + + + + + A + I
Sbjct: 56 IHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFP 115
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT--- 183
+ ++ P YS +K + ++ AYG GL
Sbjct: 116 STSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRP 175
Query: 184 -----TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEC- 237
R +N+ + I + IL + G P+ + G R + D EA
Sbjct: 176 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235
Query: 238 --ILHKGEVGHVYNVGTKKERRVI-DVAKDICKLFS-------MDPETSIKFVENRPFND 287
G + N+G + I ++ + + F P + VE+ +
Sbjct: 236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 295
Query: 288 QRY------FLDDQKLTS-LGWSERTIWEEGLRKTIEWYTQNPDW 325
+ Y + L W + +E + +T++++ + D
Sbjct: 296 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 340
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 94.3 bits (232), Expect = 3e-21
Identities = 55/371 (14%), Positives = 112/371 (30%), Gaps = 54/371 (14%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL-----DYCSNLKNLIPSKASS---- 57
+++ G G+ L + Y++ ++D L D+ L++L P +
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59
Query: 58 --------NFKFVKGDIASADLVNFLL---ITESIDTIMHFAAQTHVDNSFGNSFEFTKN 106
+ + GDI + + +S+ + + + N
Sbjct: 60 RWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHN 119
Query: 107 NIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVG----------NHEASQLLPT 156
N+ GT +L A K G+ + + T YG + D G + +
Sbjct: 120 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 179
Query: 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL----------------- 199
+ Y +K + +++G+ VYG ++
Sbjct: 180 SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239
Query: 200 IPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKE---- 255
+ +F + A G PL ++G G R YL D + E + + V +
Sbjct: 240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 299
Query: 256 -RRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRK 314
+ + +D + + Y KL LG + + L
Sbjct: 300 VNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDS 359
Query: 315 TIEWYTQNPDW 325
+ + Q D
Sbjct: 360 LLNFAVQFKDR 370
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 81.2 bits (198), Expect = 2e-17
Identities = 47/313 (15%), Positives = 79/313 (25%), Gaps = 10/313 (3%)
Query: 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS 68
I++TG AGFI S++ L I+V+D L + NL+ K D
Sbjct: 2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVDLNI--ADYMDKEDFLI 58
Query: 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
+ + T + + + H LE
Sbjct: 59 QIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAA 118
Query: 129 HVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNN 188
+ + + + + ++L A + G G
Sbjct: 119 TYGGRTSDFIESREYEKPLNVY----GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPR 174
Query: 189 VYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVY 248
L P G + R ++Y DVA+ L G G
Sbjct: 175 EGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFN 234
Query: 249 NVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY-FLDDQKLTS-LGWSERT 306
T + VA I F + Q + D L +
Sbjct: 235 LG-TGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFK 293
Query: 307 IWEEGLRKTIEWY 319
EG+ + + W
Sbjct: 294 TVAEGVTEYMAWL 306
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 76.8 bits (187), Expect = 4e-16
Identities = 53/315 (16%), Positives = 93/315 (29%), Gaps = 41/315 (13%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
ILITGA G + + +L +++ D DI
Sbjct: 3 KILITGANGQLGREIQKQLKGK--NVEVIPTD---------------------VQDLDIT 39
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ VN + + +++ AA T VD K N G
Sbjct: 40 NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPK-----NLAAAAYSVG 94
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
+ D +A E ++ P + Y TK E + ++ R
Sbjct: 95 AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN----FVKALNPKYYIVRTA 150
Query: 188 NVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV 247
+YG K + L + D V + D+A ++ + G
Sbjct: 151 WLYGDGNNFVKTMINLG---KTHDELKVVHD--QVGTPTSTVDLARVVLKVIDEKNYGTF 205
Query: 248 YNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYF---LDDQKLTSLGWSE 304
+ D A +I +L +D + + E P +R L + L
Sbjct: 206 HCTCKGICSW-YDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDI 264
Query: 305 RTIWEEGLRKTIEWY 319
W+E L++ I+
Sbjct: 265 TREWKESLKEYIDLL 279
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 53.7 bits (127), Expect = 2e-08
Identities = 47/286 (16%), Positives = 93/286 (32%), Gaps = 19/286 (6%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEG---IPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAG 440
MK LI G G +G + K + + IP + + + ++ KP V N
Sbjct: 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN--- 58
Query: 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGI 500
VD CE + N ++ + + +G
Sbjct: 59 CAAHTAVDKCEEQYDLAYKINA-------IGPKNLAAAAYSVGAEIVQISTDYVFDGEAK 111
Query: 501 GYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNK 560
E S Y KTK E +K + + + D NN + + + +
Sbjct: 112 EPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHD 171
Query: 561 VVNIPN----SMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFK 616
+ + + + T +L + +++ G ++ T G+ S + + + K
Sbjct: 172 ELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVK 231
Query: 617 WVNFTLEEQAKVIVAPRSNNEMDASKLKKEF-PELLSIKDSLIKYV 661
T EE + P+ + + L+ K+SL +Y+
Sbjct: 232 VTPCTTEEFPRPAKRPK-YSVLRNYMLELTTGDITREWKESLKEYI 276
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 76.0 bits (185), Expect = 5e-16
Identities = 38/274 (13%), Positives = 74/274 (27%), Gaps = 26/274 (9%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+L+TGA+G V +L ++ L + K GDI
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-------SAQGKEKIGGEADVFIGDI 56
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
AD +N + ID ++ + + + + +
Sbjct: 57 TDADSINP--AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 114
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
I + +G + + Y G P R
Sbjct: 115 QIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRA 173
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILHKGEVG 245
+ +L+ ++ + DVAE + +L +
Sbjct: 174 GGLLDKEGGVRELLVGKDDELLQTDTKTVP-----------RADVAEVCIQALLFEEAKN 222
Query: 246 HVYNVGTKKERRVIDVAKDICKLFSMDPETSIKF 279
+++G+K E KD LFS + + +F
Sbjct: 223 KAFDLGSKPEGTSTPT-KDFKALFS---QVTSRF 252
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 72.5 bits (176), Expect = 2e-14
Identities = 38/327 (11%), Positives = 92/327 (28%), Gaps = 41/327 (12%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+LI G G+I + N I ++ ++ + ++ K ++ +
Sbjct: 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ A + + ++I L+EA K G I+R
Sbjct: 64 -------------DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKR 110
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
F+ + + + V + +P
Sbjct: 111 FLPSEFGMDPDIME--------------HALQPGSITFIDKRKVRRAIEAASIPYTYVSS 156
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246
N G F L + + I+GDG+ ++ +DV + + +
Sbjct: 157 NMFAGY--FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLN 214
Query: 247 --VYNVGTKKERRVIDVAKDICKL-------FSMDPETSIKFVENRPFNDQRYFLDDQKL 297
+Y +V + +L + + + ++++ + ++ + L
Sbjct: 215 KTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEK---IVRCHL 271
Query: 298 TSLGWSERTIWEEGLRKTIEWYTQNPD 324
+ + E IE P+
Sbjct: 272 YQIFFRGDLYNFEIGPNAIEATKLYPE 298
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 65.7 bits (158), Expect = 3e-12
Identities = 52/327 (15%), Positives = 90/327 (27%), Gaps = 43/327 (13%)
Query: 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIA 67
NIL+ G G + + L ++ LD + K GD +
Sbjct: 2 NILLFGKTGQVGWELQRSLAPV---GNLIALDV-----------------HSKEFCGDFS 41
Query: 68 SADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
+ V + D I++ AA T VD E +
Sbjct: 42 NPKGVAETVRKLRPDVIVNAAAHTAVDK-----AESEPELAQLLNATSVEAIAKAANETG 96
Query: 128 IHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGN 187
V + E P N Y TK E + + + R +
Sbjct: 97 AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKH----LIFRTS 152
Query: 188 NVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHV 247
VY + + L + G+ + L + A A L+K EV +
Sbjct: 153 WVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGL 212
Query: 248 YNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYF----------LDDQKL 297
Y++ D A + + ++ E Y L+ +K
Sbjct: 213 YHLVAGGTTTWHDYAA-LVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKF 271
Query: 298 TS-LGWSERTIWEEGLRKTI-EWYTQN 322
WE G+++ + E +T
Sbjct: 272 QRNFDLILPQ-WELGVKRMLTEMFTTT 297
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 39.9 bits (91), Expect = 7e-04
Identities = 44/301 (14%), Positives = 98/301 (32%), Gaps = 30/301 (9%)
Query: 384 MKFLIYGRTGWIGGLLGKLCEKEG------IPFEYGKGRLEDCSSLIADVQSVKPTHVFN 437
M L++G+TG +G L + G + + G + + V+ ++P + N
Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60
Query: 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEG 497
VD ES N +A + G +++Y+T +F P
Sbjct: 61 ---AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP-- 115
Query: 498 SGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISR 557
++E D + + A + L R + NN + ++++
Sbjct: 116 ----WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAK 171
Query: 558 YNKVVNIPNSM---------TVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYK 608
+ +++ N I + + K + G+++ G + ++ +
Sbjct: 172 ERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVF 231
Query: 609 KYINPEFKWVNFTLEE----QAKVIVAPRSNNE-MDASKLKKEF-PELLSIKDSLIKYVF 662
+ T A A R N ++ K ++ F L + + + +
Sbjct: 232 DEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLT 291
Query: 663 E 663
E
Sbjct: 292 E 292
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 58.6 bits (140), Expect = 6e-10
Identities = 40/265 (15%), Positives = 75/265 (28%), Gaps = 38/265 (14%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVKGD 65
IL+ GA G+I HV + ++V + ++ K L+ S +S V G
Sbjct: 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63
Query: 66 IASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
I H + V N I +++A K G ++
Sbjct: 64 I-----------------DDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK 106
Query: 126 RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
RF + + + V + G+P
Sbjct: 107 RFFPSEFGNDVDNV---------------HAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS 151
Query: 186 GNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVG 245
N G + + + L A + I GDG+ ++ ED+ +
Sbjct: 152 SNCFAGYFL---RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL 208
Query: 246 H--VYNVGTKKERRVIDVAKDICKL 268
+ +Y + ++ K
Sbjct: 209 NKTLYLRLPANTLSLNELVALWEKK 233
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.6 bits (130), Expect = 4e-09
Identities = 28/246 (11%), Positives = 58/246 (23%), Gaps = 48/246 (19%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K I I GA G + ++ Y++ VL + + P+ D+
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADV 61
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
D ++ N T G ++ A K G + +
Sbjct: 62 DKTV--------AGQDAVIVLLG-------TRNDLSPTTVMSEGARNIVAAMKAHG-VDK 105
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+ ++ + + + + ++ G Y
Sbjct: 106 VVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLRESGLKYVA------- 148
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF-ECILHKGEVG 245
++P I + DG + D+ C+ G
Sbjct: 149 ------------VMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196
Query: 246 HVYNVG 251
H
Sbjct: 197 HSTYPS 202
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 52.7 bits (125), Expect = 6e-08
Identities = 37/248 (14%), Positives = 63/248 (25%), Gaps = 37/248 (14%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K I + GA G + + + + + L +A N +G +
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEEL---QAIPNVTLFQGPL 58
Query: 67 ASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRR 126
+ +D +F N+ + I L +A K G I+
Sbjct: 59 LNNV--------PLMD-----TLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQH 105
Query: 127 FIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRG 186
+I+ + + +H P P A K E V G
Sbjct: 106 YIY-------------SSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYN 152
Query: 187 NNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECIL---HKGE 243
NN + + P D + DV A I +
Sbjct: 153 NNFTSLPYPL--FQMELMPDGTFEWHAPFDPDIP-LPWLDAEHDVGPALLQIFKDGPQKW 209
Query: 244 VGHVYNVG 251
GH +
Sbjct: 210 NGHRIALT 217
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.5 bits (111), Expect = 1e-06
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK 40
TPK +L+ GA G H+ +R++ K++ +
Sbjct: 1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 36
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 3e-05
Identities = 6/34 (17%), Positives = 16/34 (47%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK 40
K++ I GA+G + ++ K+ ++ +
Sbjct: 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 48
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 42.7 bits (100), Expect = 6e-05
Identities = 37/261 (14%), Positives = 74/261 (28%), Gaps = 47/261 (18%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPSKASSNFKFVKGD 65
KN++ A G I L++ K V+ D+++ + L L N F D
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYD 63
Query: 66 IASADLVNFLLITESIDT-----IMHFAAQTHVDNSFGNSFEF-TKNNIYGTHVLLEACK 119
+ + L+ + D I+ A D+ + + T +L+
Sbjct: 64 VTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWD 123
Query: 120 VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
I + V G H+ YSA+KA + + +
Sbjct: 124 KRKGGPGGIIANICSVTG------FNAIHQVP------VYSASKAAVVSFTNSLAKLAPI 171
Query: 180 PVIT----------TRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCE 229
+T T + + E + + +L E
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTS----------------E 215
Query: 230 DVAEAFECILHKGEVGHVYNV 250
+ F + + G ++ +
Sbjct: 216 QCGQNFVKAIEANKNGAIWKL 236
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.0 bits (95), Expect = 2e-04
Identities = 20/194 (10%), Positives = 57/194 (29%), Gaps = 24/194 (12%)
Query: 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVK 63
+P ++++TGA I + +L+++ I+ ++ + LK++ S+ +
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRV----HVLP 57
Query: 64 GDIASADLVNFL-------LITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV--- 113
+ ++ + ++ + +++ A + +
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 114 ---------LLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164
LL+ + + + ++ N S P Y +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 165 GAEMLVMAYGRSYG 178
M
Sbjct: 178 AINMFGRTLAVDLK 191
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 39.6 bits (92), Expect = 7e-04
Identities = 30/177 (16%), Positives = 51/177 (28%), Gaps = 20/177 (11%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
K +LITGAA I + ++V D L + + V D+
Sbjct: 6 KAVLITGAAHGIGRATLELFAKE--GARLVACDI-----EEGPLREAAEAVGAHPVVMDV 58
Query: 67 ASADLVNFLLIT-----ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT 121
A V +D ++H+A T + + E + + + V
Sbjct: 59 ADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL--TGSFLVA 116
Query: 122 GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
+ T +GN + Y+A+ AG L G
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYLGNLGQA------NYAASMAGVVGLTRTLALELG 167
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 38.5 bits (89), Expect = 0.001
Identities = 29/239 (12%), Positives = 62/239 (25%), Gaps = 25/239 (10%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGD 65
K I++TG I + + V+ + + + K + D
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCD 67
Query: 66 IASADLVNFLL--ITE---SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
+++ D+V + I I ++ A + V + + E +
Sbjct: 68 VSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR 127
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN-PYSATKAGAEMLVMAYGRSYGL 179
+ + + + N + T Y+++KA LV +
Sbjct: 128 AVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWAS 187
Query: 180 PVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234
I N P + K +PL E++
Sbjct: 188 AGIRV---NALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQ---------PEEMTGQ 234
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 38.2 bits (88), Expect = 0.002
Identities = 24/183 (13%), Positives = 45/183 (24%), Gaps = 15/183 (8%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGD 65
L+TG + I + L ++ + K N + D
Sbjct: 7 TTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKG-LNVEGSVCD 63
Query: 66 IASADLVNFLL-----ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
+ S + L+ + + I+ A + + E N I GT+
Sbjct: 64 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP 180
V + S YSA+K + + +
Sbjct: 124 QIAYPLLKASQNGNVIFLSSIAGFSALPSVSL------YSASKGAINQMTKSLACEWAKD 177
Query: 181 VIT 183
I
Sbjct: 178 NIR 180
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 38.6 bits (89), Expect = 0.002
Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 6/174 (3%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGD 65
K ITG + + L + V+ K+D I S+ + ++ D
Sbjct: 26 KVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD 83
Query: 66 IASADLV-NFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
+ D+V N + + + N + + N ++ +
Sbjct: 84 VRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL 143
Query: 125 RRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
+ + + S P ++ KAG E + + +G
Sbjct: 144 EIGKQLIKAQKGAAFLSITTIYAETGSG--FVVPSASAKAGVEAMSKSLAAEWG 195
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (88), Expect = 0.002
Identities = 45/253 (17%), Positives = 76/253 (30%), Gaps = 42/253 (16%)
Query: 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKA-SSN 58
M + + L+TGA+G I + V L++ K+V + L S
Sbjct: 5 MERWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGT 62
Query: 59 FKFVKGDIASADLVNFLLIT-----ESIDTIMHFAAQTHVDNSFGNSFEFTKN----NIY 109
+ D+++ + + + +D ++ A D S K+ N+
Sbjct: 63 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVL 122
Query: 110 G----THVLLEACKVTGQIR-RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164
T ++ K I++++ + H L T+ YSATK
Sbjct: 123 ALSICTREAYQSMKERNVDDGHIININS------------MSGHRVLPLSVTHFYSATKY 170
Query: 165 GAEMLVMAYGRSYGLPVITTRGNNV---YGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221
L + R + QF KL K A
Sbjct: 171 AVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKP-- 228
Query: 222 VRSYLYCEDVAEA 234
EDVAEA
Sbjct: 229 -------EDVAEA 234
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 37.5 bits (86), Expect = 0.003
Identities = 24/178 (13%), Positives = 50/178 (28%), Gaps = 15/178 (8%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGD 65
K L+TGA G I RL I +LD + + + + + D
Sbjct: 6 KVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASV-REKGVEARSYVCD 62
Query: 66 IASADLVNFLLIT-----ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV 120
+ S + V + + ID + + A + ++ + + +
Sbjct: 63 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQG----AFAPVQDYPSDDFARVLTINVTGA 118
Query: 121 TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 178
++ + YG A + + + Y +K L
Sbjct: 119 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMA--AYGTSKGAIIALTETAALDLA 174
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (86), Expect = 0.003
Identities = 35/290 (12%), Positives = 86/290 (29%), Gaps = 41/290 (14%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLD-KLDYCSNLKNLIPSKASSNFKFVKGD 65
K +++TGA+ I + L + +VV + + + +++ ++ G
Sbjct: 15 KKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGT 72
Query: 66 IASADLV-NFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHV--LLEACKVTG 122
+ F+ + + H+ N+ N F +++ + L +T
Sbjct: 73 MEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV 132
Query: 123 QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVI 182
+ S + + V + YSA+K + + + Y + +
Sbjct: 133 AALPMLKQSNGSIVVVSSLAGKVAYPMVA------AYSASKFALDGFFSSIRKEYSVSRV 186
Query: 183 TTRGNNVYGPNQFPEKLIPKFIL--LAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH 240
I AM+ + +H + E+ A
Sbjct: 187 NVSITLCV----------LGLIDTETAMKAVSGIVHMQAAPK------EECALEI----- 225
Query: 241 KGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRY 290
+ ++E D + L ++F+ + +N R+
Sbjct: 226 ------IKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDRF 269
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 0.003
Identities = 26/181 (14%), Positives = 58/181 (32%), Gaps = 29/181 (16%)
Query: 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66
+ +L+TGA I L ++V + + ++L +L+ + + V D+
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQ--ADLDSLV--RECPGIEPVCVDL 61
Query: 67 ASADLVNFLLIT-ESIDTIMHFAAQTHVDNSFGNSFE--------FTKNNIYGTHVLLEA 117
+ L + +D +++ AA + + E + I + ++
Sbjct: 62 GDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121
Query: 118 CKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 177
G ++VS+ + Y +TK +ML
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVT--------------NHSVYCSTKGALDMLTKVMALEL 167
Query: 178 G 178
G
Sbjct: 168 G 168
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 668 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.98 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.97 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.97 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.96 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.92 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.9 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.89 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.88 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.88 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.85 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.84 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.83 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.81 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.81 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.81 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.81 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.75 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.74 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.74 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.73 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.73 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.72 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.71 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.71 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.71 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.71 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.7 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.7 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.69 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.69 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.69 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.68 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.68 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.68 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.68 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.68 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.68 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.68 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.67 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.67 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.66 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.66 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.65 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.65 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.63 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.63 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.63 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.63 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.63 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.63 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.63 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.62 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.62 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.61 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.61 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.61 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.61 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.6 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.6 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.58 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.57 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.57 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.56 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.53 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.52 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.51 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.51 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.51 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.5 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.5 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.5 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.49 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.49 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.48 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.48 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.48 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.47 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.46 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.46 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.46 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.46 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.46 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.45 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.45 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.45 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.44 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.44 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.44 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.44 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.43 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.43 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.43 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.43 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.42 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.42 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.41 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.41 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.41 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.41 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.4 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.4 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.39 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.38 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.36 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.36 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.36 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.36 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.36 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.35 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.35 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.32 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.31 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.31 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.3 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.3 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.3 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.29 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.29 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.29 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.28 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.27 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.27 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.27 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.27 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.25 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.25 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.25 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.25 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.22 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.2 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.18 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.13 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.13 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.13 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.13 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.08 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.06 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.06 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.05 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.04 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.97 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.92 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.87 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.77 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.74 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.73 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.71 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.68 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.63 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.49 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.29 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.16 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.0 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.9 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.84 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.83 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.7 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.68 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.65 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.61 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.42 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.39 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.39 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.36 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.35 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.35 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.21 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.21 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.2 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.19 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.14 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.1 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.09 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.07 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.05 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.02 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.01 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.94 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.94 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.93 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.92 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.9 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.78 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.77 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.76 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.72 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.6 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.55 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.54 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.52 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.48 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.47 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.45 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.44 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.43 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.43 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.38 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.31 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.3 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 96.24 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.24 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.16 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.15 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.1 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.09 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.97 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.96 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 95.96 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 95.92 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.92 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.86 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.84 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 95.82 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 95.79 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 95.77 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 95.66 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 95.57 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.55 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.47 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 95.4 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.36 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 95.28 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.25 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.22 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.2 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.18 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.08 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.05 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 94.94 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.94 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 94.74 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 94.73 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 94.73 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.67 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 94.6 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.54 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 94.53 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.51 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 94.48 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.36 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 94.28 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 94.23 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 94.23 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.17 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 94.13 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.09 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.05 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 93.94 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 93.93 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 93.89 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 93.74 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 93.68 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.64 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 93.37 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 93.32 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.32 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.29 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 93.15 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.15 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 93.07 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 93.03 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.0 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 92.95 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 92.78 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.55 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 92.54 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.51 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.46 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 92.4 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.33 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 92.25 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 92.1 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 92.05 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.03 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.94 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 91.83 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 91.78 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.73 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 91.71 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 91.39 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.39 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 91.29 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 91.12 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 91.06 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.01 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 91.0 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.91 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.91 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.89 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 90.85 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 90.73 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.72 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 90.65 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 90.62 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.49 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.44 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 90.4 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.39 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 90.38 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 90.36 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 90.34 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 90.17 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 90.15 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 90.0 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 89.99 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 89.83 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 89.74 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 89.73 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 89.71 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.67 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 89.66 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 89.66 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 89.58 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.55 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 89.47 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 89.44 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 89.16 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 89.07 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 89.07 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 88.99 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 88.96 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 88.94 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 88.92 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.75 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 88.49 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 88.38 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 88.32 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 88.3 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 88.26 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 88.26 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.19 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.12 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 88.01 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.99 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 87.62 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.52 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 87.44 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 87.41 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 87.06 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 86.88 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 86.87 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 86.78 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 86.69 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 86.63 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 86.4 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 86.04 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 85.68 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 85.66 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 85.44 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 85.43 | |
| d1iu8a_ | 206 | Pyrrolidone carboxyl peptidase (pyroglutamate amin | 85.41 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 85.31 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 85.26 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 85.18 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.17 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 84.99 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 84.76 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 84.75 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 84.57 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 84.5 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 84.49 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 84.41 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 84.26 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 84.08 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 83.97 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 83.7 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 83.65 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 83.63 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 83.58 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 83.52 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 83.42 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 83.35 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 83.34 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 83.33 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 83.05 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 83.0 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 82.99 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 82.81 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 82.76 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 82.66 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.55 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.49 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 82.48 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 82.46 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 82.19 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 82.15 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 82.09 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 82.04 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 82.03 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 81.88 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 81.84 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 81.82 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 81.82 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 81.79 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 81.3 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 81.27 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 81.25 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 81.21 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 81.15 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 80.85 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 80.73 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 80.72 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 80.49 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 80.21 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 80.2 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 80.04 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=3.5e-47 Score=384.88 Aligned_cols=315 Identities=39% Similarity=0.684 Sum_probs=277.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCC----EEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEY----KIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~----~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
|||||||||||||++|++.|+++|+.+ +++.+|..........+.......+++++.+|+.+........ ..+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc--cccc
Confidence 589999999999999999999997543 5677776554444444444444568999999999999888776 7899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+|+|+|+.........++.+.+++|+.|+.+++++|++.+ +++|||+||..+||.....+. +|+++..|.++|+.+
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~---~E~~~~~p~~~Y~~s 154 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSW---TESSPLEPNSPYAAS 154 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCB---CTTSCCCCCSHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCC---CCCCCCCCCCHHHHH
Confidence 9999999887777777888999999999999999999977 899999999999998876543 788889999999999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
|..+|.+++.++++++++++++||++||||++.+..+++.+++.+..++++.++++|.+.|+|+|++|+|+++..+++++
T Consensus 155 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (322)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998888899999999999999999999999999999999999999999998
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHhh
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~~ 321 (668)
..+++||++++.+.++.|+++.+.+.+|.+.. .+.....++.....+.+|++|++ .|||+|+++++|+|+++++||++
T Consensus 235 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~ 313 (322)
T d1r6da_ 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313 (322)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGG-GEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCCeeEEeecccchhHHHHHHHHHHhCCCcc-ceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Confidence 88899999999999999999999999997644 34445556666677889999997 59999999999999999999999
Q ss_pred CCCcccc
Q 005949 322 NPDWWGD 328 (668)
Q Consensus 322 ~~~~~~~ 328 (668)
++.+|..
T Consensus 314 n~~~~~~ 320 (322)
T d1r6da_ 314 NRGWWEP 320 (322)
T ss_dssp CHHHHGG
T ss_pred hHHhHhh
Confidence 9888764
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2e-47 Score=391.72 Aligned_cols=321 Identities=41% Similarity=0.720 Sum_probs=273.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||++|+++|+++|+. .|+++++.........+.......+++++.+|++|.+.+..++...++|+|||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih 79 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999999543 36677765444444444444445689999999999999999987778999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC--------CCcEEEEEcCccccCCCCCCcCCC-------CCCCC
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG--------QIRRFIHVSTDEVYGETDEDAVVG-------NHEAS 151 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--------~~~~~v~~SS~~vyg~~~~~~~~~-------~~e~~ 151 (668)
|||......+..++...+++|+.|+.+++++|++.+ .+++||++||+.|||........+ ..|..
T Consensus 80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 999987777778889999999999999999998754 246999999999999875433221 23566
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
+..|.++|+.+|.++|.+++.+.++++++++++||++||||++....+++.+++.+..++++.++++|.++|+|+|++|+
T Consensus 160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~ 239 (361)
T d1kewa_ 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence 77889999999999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCC------cceEeccCCCCCCcccccChHHHH-hCCCcc
Q 005949 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPE------TSIKFVENRPFNDQRYFLDDQKLT-SLGWSE 304 (668)
Q Consensus 232 a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~ 304 (668)
|+|+..++++...+++||++++++.++.|+++.+.+.++.... ..+...+.++.....+.+|++|++ +|||+|
T Consensus 240 a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P 319 (361)
T d1kewa_ 240 ARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKP 319 (361)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCC
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCCC
Confidence 9999999999888899999999999999999999987753321 235555666777777889999997 599999
Q ss_pred cCCHHHHHHHHHHHHhhCCCcccc
Q 005949 305 RTIWEEGLRKTIEWYTQNPDWWGD 328 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~~~~~~ 328 (668)
+++++|+|+++++||+.+++++.+
T Consensus 320 ~~~l~e~i~~ti~w~~~n~~~~~~ 343 (361)
T d1kewa_ 320 LETFESGIRKTVEWYLANTQWVNN 343 (361)
T ss_dssp SCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999998765544
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.7e-44 Score=368.97 Aligned_cols=318 Identities=38% Similarity=0.627 Sum_probs=272.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.||+|||||||||||++|+++|+++|+.++|+++|+.........+ ......+++++.+|+.|.+.+..++ ..++.|
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~-~~~~~~~i~~~~~Di~d~~~~~~~~--~~~~~v 77 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLA--AKADAI 77 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHH--TTCSEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH-HHhhcCCeEEEEccCCCHHHHHHHH--hhhhhh
Confidence 3689999999999999999999999988999998875433332222 1223458999999999999999998 789999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCC---------CcCCCCCCCCCCCC
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDE---------DAVVGNHEASQLLP 155 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~---------~~~~~~~e~~~~~p 155 (668)
+|+|+......+..++.+.+++|+.|+.++++++...+ .++|++||+.+||.... .......|.++..|
T Consensus 78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p 155 (346)
T d1oc2a_ 78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP 155 (346)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred hhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCC
Confidence 99999888766778888999999999999999999987 68999999999986321 11223456677889
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
.++|+.+|.++|.+++.++++++++++++||++||||.......+..++.....+.++.+++++.+.|+|+|++|+|+++
T Consensus 156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence 99999999999999999998889999999999999998877788888888888999899999999999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccC-CHHHHHH
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERT-IWEEGLR 313 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~-~~~~~l~ 313 (668)
+.+++++..++.||++++...++.++++.+.+.++.+.. .+.....++.....+.+|++|++ .|||+|++ +++|+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~ 314 (346)
T d1oc2a_ 236 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLE 314 (346)
T ss_dssp HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTT-CSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHH
T ss_pred HHHHhhcccCccccccccccccchHHHHHHHHHhCCCCc-ceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHH
Confidence 999999989999999999999999999999999987643 35555666666667789999997 59999996 6999999
Q ss_pred HHHHHHhhCCCcccc
Q 005949 314 KTIEWYTQNPDWWGD 328 (668)
Q Consensus 314 ~~~~~~~~~~~~~~~ 328 (668)
++++||+++.++|..
T Consensus 315 ~ti~w~~~n~~~~~~ 329 (346)
T d1oc2a_ 315 ETIQWYTDNQDWWKA 329 (346)
T ss_dssp HHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999876643
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-44 Score=358.99 Aligned_cols=303 Identities=29% Similarity=0.467 Sum_probs=252.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|||||||||||||++|++.|+++ +++|+++++... .....+.......++.+...|+.+. ++ .++|+||
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~-----~~--~~~d~Vi 70 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFT-GRKRNVEHWIGHENFELINHDVVEP-----LY--IEVDQIY 70 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSS-CCGGGTGGGTTCTTEEEEECCTTSC-----CC--CCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCc-CCHHHHHHhcCCCceEEEehHHHHH-----HH--cCCCEEE
Confidence 479999999999999999999999 788999887432 2222222222234566666666443 33 5799999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCC--CCCCCCCCCCChhHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVG--NHEASQLLPTNPYSATK 163 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~--~~e~~~~~p~~~Y~~sK 163 (668)
|+|+......+..++...+++|+.|+.+|+++|++.+ .+|||+||++|||.....+..+ ..+.++..|.++|+.+|
T Consensus 71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK 148 (312)
T d2b69a1 71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGK 148 (312)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHH
T ss_pred ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHH
Confidence 9999887666678889999999999999999999977 4899999999999876544322 23445677889999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
.++|.+++.++++++++++++||++||||+... ..+++.+++.+..++++.++++|.+.|+|+|++|++++++.+++.
T Consensus 149 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~ 228 (312)
T d2b69a1 149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 228 (312)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998744 368899999999999999999999999999999999999999876
Q ss_pred CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH-hCCCcccCCHHHHHHHHHHHHh
Q 005949 242 GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT-SLGWSERTIWEEGLRKTIEWYT 320 (668)
Q Consensus 242 ~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~~~~~~~~~l~~~~~~~~ 320 (668)
. .+++||++++...++.++++.+++.+|.+.. +.+.+.++.......+|++|++ .|||+|+++++++|+++++||+
T Consensus 229 ~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~ 305 (312)
T d2b69a1 229 N-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSE--IQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305 (312)
T ss_dssp S-CCSCEEESCCCEEEHHHHHHHHHHHHTCCCC--EEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred c-cCCceEecCCcccchhhHHHHHHHHhCCCCc--eEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 6 4579999999999999999999999998765 4555666666667889999996 5899999999999999999998
Q ss_pred hCC
Q 005949 321 QNP 323 (668)
Q Consensus 321 ~~~ 323 (668)
++.
T Consensus 306 ~~~ 308 (312)
T d2b69a1 306 KEL 308 (312)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-44 Score=370.49 Aligned_cols=308 Identities=21% Similarity=0.263 Sum_probs=243.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC---CccccCC--CcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS---NLKNLIP--SKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
|+|||||||||||++|+++|+++ +++|++++|..... .+..+.. .....+++++++|++|.+.+.+++...++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 78999999999999999999999 78999999864321 1111111 12345799999999999999999977789
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChh
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 159 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 159 (668)
|+|||+|+..+...++.++..++++|+.||.+|+++|++.+ .+++|||+||++|||.....+ .+|+++..|.++|
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~---~~E~~~~~P~~~Y 156 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP---QKETTPFYPRSPY 156 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS---BCTTSCCCCCSHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCC---cCCCCCCCCCChH
Confidence 99999999988888889999999999999999999999865 245899999999999765443 4788888999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCC---hHHHHHHHHHcCC-CceeecCCCceEeceeHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEK---LIPKFILLAMRGL-PLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
+.+|..+|.+++.++++++++++++||++||||+..+.. .+...+.....++ ....++++.+.|+|+|++|+++++
T Consensus 157 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~ 236 (357)
T d1db3a_ 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence 999999999999999999999999999999999764432 3334444444444 345568899999999999999999
Q ss_pred HHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc---------e-Ee-------------------ccCCCCC
Q 005949 236 ECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS---------I-KF-------------------VENRPFN 286 (668)
Q Consensus 236 ~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~---------~-~~-------------------~~~~~~~ 286 (668)
..+++++ .++.||+++++++|+.|+++.+.+.+|...... + .. ...+|..
T Consensus 237 ~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 315 (357)
T d1db3a_ 237 WMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAE 315 (357)
T ss_dssp HHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC
T ss_pred HHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcc
Confidence 9998875 567999999999999999999999998542210 0 00 0012333
Q ss_pred CcccccChHHHHh-CCCcccCCHHHHHHHHHHHHh
Q 005949 287 DQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYT 320 (668)
Q Consensus 287 ~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~~ 320 (668)
.....+|++|+++ |||+|+++++|+|+++++++.
T Consensus 316 ~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l 350 (357)
T d1db3a_ 316 VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL 350 (357)
T ss_dssp -CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 4456789999974 999999999999999986543
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=6e-43 Score=356.77 Aligned_cols=309 Identities=27% Similarity=0.400 Sum_probs=261.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC-----ccccCCCcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
++|+|||||||||||++|+++|+++ +++|+++|+...... ...+.......+++++.+|+.|...+.... .
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~--~ 90 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC--A 90 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH--T
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc--c
Confidence 5689999999999999999999999 789999987532111 111111222357899999999999888777 7
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChh
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPY 159 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y 159 (668)
.+++|+|+++......+..++...+++|+.|+.+|+++|++.+ +++|||+||..+||.....+ .+|+++..|.+.|
T Consensus 91 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~---~~E~~~~~p~~~Y 166 (341)
T d1sb8a_ 91 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLP---KVEDTIGKPLSPY 166 (341)
T ss_dssp TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSS---BCTTCCCCCCSHH
T ss_pred cccccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCC---ccCCCCCCCCCcc
Confidence 8999999999887777778889999999999999999999987 89999999999999876544 3788899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai 235 (668)
+.+|..+|.+++.+++.++++++++||++||||+..+ ..+++.+++.+..|+++.++++|.+.|+|+|++|++.|+
T Consensus 167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~ 246 (341)
T d1sb8a_ 167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 246 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhh
Confidence 9999999999999999999999999999999997643 357888999999999999999999999999999999999
Q ss_pred HHHHhcC--CCCceEEEcCCCcccHHHHHHHHHHHhCCCCC---cceEeccCCCCCCcccccChHHHHh-CCCcccCCHH
Q 005949 236 ECILHKG--EVGHVYNVGTKKERRVIDVAKDICKLFSMDPE---TSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWE 309 (668)
Q Consensus 236 ~~~~~~~--~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~ 309 (668)
..++... ..+++||++++...|+.|+++.|.+.++.+.. ....+.+.++.......+|++|+++ |||+|+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~ 326 (341)
T d1sb8a_ 247 LLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVS 326 (341)
T ss_dssp HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHH
T ss_pred hhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHH
Confidence 9888764 35779999999999999999999999875432 1223334445555667889999975 9999999999
Q ss_pred HHHHHHHHHHhh
Q 005949 310 EGLRKTIEWYTQ 321 (668)
Q Consensus 310 ~~l~~~~~~~~~ 321 (668)
++|+++++||++
T Consensus 327 ~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 327 AGVALAMPWYIM 338 (341)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-42 Score=354.31 Aligned_cols=312 Identities=27% Similarity=0.456 Sum_probs=254.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc-ccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK-NLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
|||||||||||||++|++.|+++ +++|+++||........ .........+++++++|++|.+.+.++++..++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 58999999999999999999999 68899998754321110 0001112357999999999999999999877999999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|+||....+.+..++.+.+++|+.||.+++++|++.+ +++||++||.++|+........ ++.....|.++|+.+|..
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~--e~~~~~~p~~~Y~~sK~~ 155 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYV--ESFPTGTPQSPYGKSKLM 155 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBC--TTSCCCCCSSHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccc--cccccCCCcchHHHHHhh
Confidence 9999887766777889999999999999999999987 9999999999999877654432 344556789999999999
Q ss_pred HHHHHHHHHHh-cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHHcC-CCceeec------CCCceEecee
Q 005949 166 AEMLVMAYGRS-YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMRG-LPLPIHG------DGSNVRSYLY 227 (668)
Q Consensus 166 ~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~ 227 (668)
+|.++.++..+ .+++++++|++++|||+.. ...+++.++..+..+ .++.+.+ ++.+.|+|+|
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~ 235 (338)
T d1udca_ 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence 99999976655 4899999999999998642 134777777766544 4565554 4788999999
Q ss_pred HHHHHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCc
Q 005949 228 CEDVAEAFECILHK---GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWS 303 (668)
Q Consensus 228 v~D~a~ai~~~~~~---~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~ 303 (668)
++|++.++..+... ...+++||++++.++|+.|+++.+.+.+|.+.. +.+.+.++.......+|++|+++ |||+
T Consensus 236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~lgwk 313 (338)
T d1udca_ 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN--YHFAPRREGDLPAYWADASKADRELNWR 313 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCC--EEEECCCTTCCSBCCBCCHHHHHHHCCC
T ss_pred EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCc--eEECCCCCCCCCEeeECHHHHHHHHCCC
Confidence 99999988776653 334578999999999999999999999997665 45556666666778899999985 9999
Q ss_pred ccCCHHHHHHHHHHHHhhCCCc
Q 005949 304 ERTIWEEGLRKTIEWYTQNPDW 325 (668)
Q Consensus 304 ~~~~~~~~l~~~~~~~~~~~~~ 325 (668)
|+++++|+|+++++|+++++++
T Consensus 314 p~~~l~egi~~ti~w~~~~~~~ 335 (338)
T d1udca_ 314 VTRTLDEMAQDTWHWQSRHPQG 335 (338)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTC
T ss_pred cCCCHHHHHHHHHHHHHhchhh
Confidence 9999999999999999999764
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4.4e-42 Score=347.70 Aligned_cols=309 Identities=21% Similarity=0.248 Sum_probs=258.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|||||||||||++|+++|+++ +++|++++|.........+.......+++++.+|+.|.+.+...+....+++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 68999999999999999999999 7899999987544333333222334579999999999999999887778999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+.........++.+.+..|+.|+.+++++|++.+..++|+++||+.+||....... +|+++..|.++|+.+|.++
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~---~E~~~~~p~~~Y~~sK~~~ 155 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQ---DENTPFYPRSPYGVAKLYG 155 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSB---CTTSCCCCCSHHHHHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCC---CCCCCccccChhHHHHHHH
Confidence 9998887777888899999999999999999999887779999999999987765543 6888999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh---HHHHHHHHH-cCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL---IPKFILLAM-RGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
|.+++.++++++++++++||+++|||....... +..++.... .+.+...+++|.++|+|+|++|+|+++..+++++
T Consensus 156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~ 235 (321)
T d1rpna_ 156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235 (321)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence 999999999999999999999999997654433 223333333 4445556799999999999999999999999887
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEec--cCCCCCCcccccChHHHHh-CCCcccCCHHHHHHHHHHHH
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFV--ENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWY 319 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~ 319 (668)
. ++.||++++...++.++++.+.+.+|.+....+... ..+|.....+.+|++|+++ |||+|+++++|+|+++++|+
T Consensus 236 ~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~ 314 (321)
T d1rpna_ 236 K-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEAD 314 (321)
T ss_dssp S-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred C-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 5 468999999999999999999999998754333332 3455556677889999985 89999999999999999998
Q ss_pred hh
Q 005949 320 TQ 321 (668)
Q Consensus 320 ~~ 321 (668)
.+
T Consensus 315 l~ 316 (321)
T d1rpna_ 315 LR 316 (321)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=4.4e-41 Score=346.15 Aligned_cols=304 Identities=21% Similarity=0.276 Sum_probs=249.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
++|||||||||||||++|+++|+++ +++|+++++........ .....++..+|+.+.+.+.+++ .++|+|
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~--~~~d~V 83 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVT--EGVDHV 83 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccchhh------hcccCcEEEeechhHHHHHHHh--hcCCeE
Confidence 5789999999999999999999999 68899988754322111 1235678899999999999888 789999
Q ss_pred EEcCccCCccc-ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCC----CCCCCCCCCCCChh
Q 005949 85 MHFAAQTHVDN-SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVV----GNHEASQLLPTNPY 159 (668)
Q Consensus 85 ih~a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~----~~~e~~~~~p~~~Y 159 (668)
||+|+...... ...++...+..|+.++.+++++|++.+ +++||++||+.+|+.....+.. ...|..+..|.++|
T Consensus 84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 162 (363)
T d2c5aa1 84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 162 (363)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred eecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHH
Confidence 99998765433 246677889999999999999999987 8999999999999976644332 12356677889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC-----ChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-----KLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 160 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
+.+|..+|.+++.+.++++++++++||+++|||++... ..................+++|.+.|+|+|++|++++
T Consensus 163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~ 242 (363)
T d2c5aa1 163 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHH
Confidence 99999999999999999999999999999999976432 2333444555667777888999999999999999999
Q ss_pred HHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCCHHHHHH
Q 005949 235 FECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLR 313 (668)
Q Consensus 235 i~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~ 313 (668)
+..+++.. .+++||++++..+|+.|+++.+.+.+|.+.+ +...+ .+.......+|++|+++ |||+|+++++|+|+
T Consensus 243 ~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~--i~~~~-~~~~~~~~~~d~ska~~~LGw~p~~sleegi~ 318 (363)
T d2c5aa1 243 VLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIP-GPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLR 318 (363)
T ss_dssp HHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCC--EEEEC-CCCCCSBCEECCHHHHHHHSCCCCCCHHHHHH
T ss_pred HHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCc--eEeCC-CCCCccccccCHHHHHHHhCCCCCCCHHHHHH
Confidence 99988865 5679999999999999999999999998754 33333 33344556789999975 99999999999999
Q ss_pred HHHHHHhhCC
Q 005949 314 KTIEWYTQNP 323 (668)
Q Consensus 314 ~~~~~~~~~~ 323 (668)
++++||+++.
T Consensus 319 ~ti~w~~~~~ 328 (363)
T d2c5aa1 319 ITYFWIKEQI 328 (363)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998765
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-40 Score=340.53 Aligned_cols=315 Identities=24% Similarity=0.352 Sum_probs=255.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccc-cC------CCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKN-LI------PSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~-~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
.|||||||||||||++|+++|+++ +++|+++|+......... .. ......++.++.+|++|.+.+.+++..
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 79 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc
Confidence 379999999999999999999999 678988876432111100 00 112345799999999999999999877
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCCh
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNP 158 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~ 158 (668)
..+++|+|+||..+...+..++.+.++.|+.|+.++++++++.+ +++|+++||+.+|+....... ..+.....+.++
T Consensus 80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~--~~~~~~~~~~~~ 156 (346)
T d1ek6a_ 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPL--DEAHPTGGCTNP 156 (346)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSB--CTTSCCCCCSSH
T ss_pred cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccc--cccccccccCCh
Confidence 88999999999988777778899999999999999999999987 999999999999998765543 233344567789
Q ss_pred hHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCC----------CCChHHHHHHHHH-cCCCceee------cCCC
Q 005949 159 YSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQF----------PEKLIPKFILLAM-RGLPLPIH------GDGS 220 (668)
Q Consensus 159 Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~----------~~~~~~~~~~~~~-~~~~~~~~------~~~~ 220 (668)
|+.+|..+|..++.+++. .+++.+++|++++|||... ...+++.+...+. ++.++.+. .++.
T Consensus 157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~ 236 (346)
T d1ek6a_ 157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCC
Confidence 999999999999998765 4899999999999998642 2346766666555 44455543 3577
Q ss_pred ceEeceeHHHHHHHHHHHHhc---CCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHH
Q 005949 221 NVRSYLYCEDVAEAFECILHK---GEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKL 297 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~---~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~ 297 (668)
+.|+|+|++|+|.++..+++. ...+++||++++...++.|+++.|.+.+|.+.+ +.+.+.++.......+|++|+
T Consensus 237 ~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~--~~~~~~~~~e~~~~~~d~~k~ 314 (346)
T d1ek6a_ 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP--YKVVARREGDVAACYANPSLA 314 (346)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC--EEEECCCTTCCSEECBCCHHH
T ss_pred eeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCC--eEECCCCCCCCCEeeECHHHH
Confidence 889999999999999877654 334578999999999999999999999998755 455666777777788999999
Q ss_pred Hh-CCCcccCCHHHHHHHHHHHHhhCCCccc
Q 005949 298 TS-LGWSERTIWEEGLRKTIEWYTQNPDWWG 327 (668)
Q Consensus 298 ~~-lG~~~~~~~~~~l~~~~~~~~~~~~~~~ 327 (668)
++ |||+|+++++|+|+++++||++++.+++
T Consensus 315 ~~~lgw~p~~slee~I~~~i~w~~~n~~~~~ 345 (346)
T d1ek6a_ 315 QEELGWTAALGLDRMCEDLWRWQKQNPSGFG 345 (346)
T ss_dssp HHTTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHCCCcCCCHHHHHHHHHHHHHhCHhhcC
Confidence 75 9999999999999999999999997654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-40 Score=338.81 Aligned_cols=309 Identities=21% Similarity=0.309 Sum_probs=245.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||++|+++|+++| .++|+++++.... .. .....++++++.+|+++.+.+.+.+. .++|+|||
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~~~~~--~~---~~~~~~~~~~i~~Di~~~~~~~~~~~-~~~d~Vih 73 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDA--IS---RFLNHPHFHFVEGDISIHSEWIEYHV-KKCDVVLP 73 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGG--GG---GGTTCTTEEEEECCTTTCSHHHHHHH-HHCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeCCCcc--hh---hhccCCCeEEEECccCChHHHHHHHH-hCCCcccc
Confidence 589999999999999999999985 3689999875321 11 11224689999999998866665432 47999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCC----CCCCCCCCCChhHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGN----HEASQLLPTNPYSAT 162 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~----~e~~~~~p~~~Y~~s 162 (668)
+|+.........++...+..|+.|+.+++++|.+.+ .+++++||..+|+........+. .+.....|.+.|+.+
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~s 151 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 151 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred ccccccccccccCCcccccccccccccccccccccc--ccccccccccccccccccccccccccccccccCCCcchhhhc
Confidence 999988766777888999999999999999999976 57789999999998765543221 122334466789999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC--------CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--------EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
|..+|.+++.++++++++++++|++.+|||.... ...++.++..++.|+++.++++|.+.|+|+|++|++++
T Consensus 152 K~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a 231 (342)
T d2blla1 152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 231 (342)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred ccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccce
Confidence 9999999999999999999999999999986532 23677888899999999999999999999999999999
Q ss_pred HHHHHhcC---CCCceEEEcCCC-cccHHHHHHHHHHHhCCCCCcc-------eEe------ccCCCCCCcccccChHHH
Q 005949 235 FECILHKG---EVGHVYNVGTKK-ERRVIDVAKDICKLFSMDPETS-------IKF------VENRPFNDQRYFLDDQKL 297 (668)
Q Consensus 235 i~~~~~~~---~~~~~~ni~~~~-~~s~~el~~~i~~~~g~~~~~~-------~~~------~~~~~~~~~~~~~~~~k~ 297 (668)
+..+++++ ..+++||+++++ .+|+.|+++.+.+.+|...... ... ............+|++|+
T Consensus 232 ~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 311 (342)
T d2blla1 232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNA 311 (342)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHH
T ss_pred eeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHH
Confidence 99999864 347899998765 5899999999999998664321 000 011111223456799999
Q ss_pred H-hCCCcccCCHHHHHHHHHHHHhhCCC
Q 005949 298 T-SLGWSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 298 ~-~lG~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
+ +|||+|+++++|+|+++++||+++.+
T Consensus 312 ~~~lgw~P~~sleegl~~ti~~y~~~~~ 339 (342)
T d2blla1 312 HRCLDWEPKIDMQETIDETLDFFLRTVD 339 (342)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence 7 49999999999999999999998764
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-40 Score=338.55 Aligned_cols=315 Identities=27% Similarity=0.389 Sum_probs=246.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcccc-CCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL-IPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
|.|||||||||||++|+++|+++ +++|+++++.......... .......+++++.+|++|.+.+..++...++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 56999999999999999999999 6889998875332111000 01112357899999999999999998778999999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCc-CCCCCCCCCCCCCChhHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA-VVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~-~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
|+||.........++..++.+|+.++.+|+++|++.+ +++||++||..|||.....+ ..+.+|+.+..|.++|+.+|.
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 158 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 158 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHH
Confidence 9999887666677888999999999999999999977 89999999999999765432 234567788889999999999
Q ss_pred HHHHHHHHHHHh--cCCCEEEEeeCceeCCCC----------CCCChHHHHHHHHHc-CCCceeecC------CCceEec
Q 005949 165 GAEMLVMAYGRS--YGLPVITTRGNNVYGPNQ----------FPEKLIPKFILLAMR-GLPLPIHGD------GSNVRSY 225 (668)
Q Consensus 165 ~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~----------~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~ 225 (668)
++|++++.+.+. .+++++++|++++||+.. .+..+++.+...+.. +.++.++++ +...+++
T Consensus 159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~ 238 (347)
T d1z45a2 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238 (347)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence 999999998653 489999999999999753 123567666666553 445555554 4567889
Q ss_pred eeHHHHHHHHHHHHhcC-------CCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHH
Q 005949 226 LYCEDVAEAFECILHKG-------EVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLT 298 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~-------~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 298 (668)
+++.|.+.+++.+++.. ..+++||++++.++|+.|+++.+.+.+|.+.. +...+.++.......+|++|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~sk~~ 316 (347)
T d1z45a2 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP--YKVTGRRAGDVLNLTAKPDRAK 316 (347)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC--C---------CCCCCBCCHHHH
T ss_pred eeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCc--eEeCCCCCCCCCEeeECHHHHH
Confidence 99999999988777531 23578999999999999999999999998765 3334445555566788999997
Q ss_pred h-CCCcccCCHHHHHHHHHHHHhhCCCcc
Q 005949 299 S-LGWSERTIWEEGLRKTIEWYTQNPDWW 326 (668)
Q Consensus 299 ~-lG~~~~~~~~~~l~~~~~~~~~~~~~~ 326 (668)
+ |||+|+++++|+|+++++|+++++.++
T Consensus 317 ~~lGw~p~~~lee~i~~ti~w~~~np~~~ 345 (347)
T d1z45a2 317 RELKWQTELQVEDSCKDLWKWTTENPFGY 345 (347)
T ss_dssp HHTCCCCCCCHHHHHHHHHHHHHHCTTCS
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHhChhcC
Confidence 5 999999999999999999999997543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-40 Score=336.31 Aligned_cols=308 Identities=22% Similarity=0.259 Sum_probs=248.9
Q ss_pred CeE-EEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC---ccccCC---CcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 7 KNI-LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN---LKNLIP---SKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 7 ~~v-LVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~---~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
||| ||||||||||++|+++|+++ +++|++++|...... +..+.. .....+++++.+|++|.+.+..++...
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 578 99999999999999999999 789999998643222 121111 112347899999999999999999888
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC--CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG--QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTN 157 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~ 157 (668)
++++|+|+|+......+..++...+++|+.||.++++++++++ .+++||++||++|||.....+ .+|+++..|.+
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~---~~E~~~~~P~~ 155 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP---QKETTPFYPRS 155 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS---BCTTSCCCCCS
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCC---CCCCCCCCCCC
Confidence 9999999999888777778888899999999999999999876 235899999999999765443 37888999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCCh----HHHHHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 158 PYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKL----IPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 158 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
+|+.+|.++|++++.+.++++++++++||+++|||....... ...+......+.+....+++.+.|+|+|++|+++
T Consensus 156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~ 235 (347)
T d1t2aa_ 156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence 999999999999999998899999999999999997654432 3334455556777888899999999999999999
Q ss_pred HHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcc------e-------------EeccCCCCCCcccccCh
Q 005949 234 AFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETS------I-------------KFVENRPFNDQRYFLDD 294 (668)
Q Consensus 234 ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~------~-------------~~~~~~~~~~~~~~~~~ 294 (668)
++..++++... +.|+++.+...++.+....+...++...... + .....+|.....+.+|+
T Consensus 236 a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~ 314 (347)
T d1t2aa_ 236 AMWLMLQNDEP-EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 314 (347)
T ss_dssp HHHHHHHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred HHHHHhhcCCC-ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECH
Confidence 99999998754 5799998999999999999999988753210 0 00112344455667899
Q ss_pred HHHHh-CCCcccCCHHHHHHHHHHHHh
Q 005949 295 QKLTS-LGWSERTIWEEGLRKTIEWYT 320 (668)
Q Consensus 295 ~k~~~-lG~~~~~~~~~~l~~~~~~~~ 320 (668)
+|+++ |||+|+++++|+|+++++|..
T Consensus 315 skak~~Lgw~P~~sl~e~i~~~I~~~~ 341 (347)
T d1t2aa_ 315 TKAKQKLNWKPRVAFDELVREMVHADV 341 (347)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 99975 999999999999999986543
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.7e-40 Score=345.44 Aligned_cols=317 Identities=20% Similarity=0.269 Sum_probs=248.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-----CCccccCC------------CcCCCCeEEEEccCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----SNLKNLIP------------SKASSNFKFVKGDIAS 68 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-----~~~~~~~~------------~~~~~~~~~~~~Dl~d 68 (668)
+|||||||||||||++|+++|+++ +++|+++|..... .....+.. .....+++++.+|++|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 78 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence 579999999999999999999999 6889998732110 00000000 0123578999999999
Q ss_pred HHHHHHHhccCCCCEEEEcCccCCcccccCC---hHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 69 ADLVNFLLITESIDTIMHFAAQTHVDNSFGN---SFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 69 ~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~---~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.+.+.+++...++|+|||+||......+..+ +...+++|+.||.+++++|++.+..++|+++||..+|+........
T Consensus 79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~ 158 (393)
T d1i24a_ 79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 158 (393)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence 9999999987789999999998776555444 3467899999999999999998866788899999999876532211
Q ss_pred C----------CCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC-----------------CC
Q 005949 146 G----------NHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-----------------EK 198 (668)
Q Consensus 146 ~----------~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~-----------------~~ 198 (668)
. +++..+..|.++|+.+|.++|.+++.+.++++++++++||++||||+..+ ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 238 (393)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence 0 12234667889999999999999999999999999999999999997532 23
Q ss_pred hHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCceEEE--cCCCcccHHHHHHHHHHHhC---CCC
Q 005949 199 LIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNV--GTKKERRVIDVAKDICKLFS---MDP 273 (668)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni--~~~~~~s~~el~~~i~~~~g---~~~ 273 (668)
++..+++....++++.+++++.+.|+|+|++|+++|+..++++....+.|++ ++++.+|+.|+++.+.+..+ ...
T Consensus 239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~ 318 (393)
T d1i24a_ 239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV 318 (393)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc
Confidence 5788888999999999999999999999999999999999998766555444 44577999999999988764 332
Q ss_pred CcceEeccCCCCCCcccccChHHHHhCCCcccCCHHHHHHHHHHHHhhCCC
Q 005949 274 ETSIKFVENRPFNDQRYFLDDQKLTSLGWSERTIWEEGLRKTIEWYTQNPD 324 (668)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~~~~l~~~~~~~~~~~~ 324 (668)
.......+..+.....+..|++|+++|||+|+++++++++++++|++++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k~ 369 (393)
T d1i24a_ 319 KKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFKD 369 (393)
T ss_dssp CEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred ceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHHH
Confidence 221122233344445567889999999999999999999999999988764
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=2.2e-39 Score=335.65 Aligned_cols=315 Identities=24% Similarity=0.343 Sum_probs=249.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcccc-----------------CCCcCCCCeEEEEccCCCH
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL-----------------IPSKASSNFKFVKGDIASA 69 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~-----------------~~~~~~~~~~~~~~Dl~d~ 69 (668)
|||||||||||||++|+++|++++ +++|+++|+.......... .......++.++.+|++|.
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~-~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhC-CCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 589999999999999999999754 7899999863321111100 0111234688999999999
Q ss_pred HHHHHHhccC-CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCC---
Q 005949 70 DLVNFLLITE-SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVV--- 145 (668)
Q Consensus 70 ~~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~--- 145 (668)
+.+.+++... ++|+|||+|+.........++...++.|+.++.++++++++.+ +++++++||..+|+........
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccccccccccccccc
Confidence 9999998654 6799999999887766677788899999999999999999977 8999999999999876543321
Q ss_pred -CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---------CChHHHHHHHHH-------
Q 005949 146 -GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP---------EKLIPKFILLAM------- 208 (668)
Q Consensus 146 -~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~------- 208 (668)
+..|+.+..|.++|+.+|..+|.+++.+.+.++++++++|++++|||++.. ..+++.++..+.
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred cccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence 235667788999999999999999999999899999999999999998743 234555443332
Q ss_pred ---------cCCCceee------cCCCceEeceeHHHHHHHHHHHHhc---------CCCCceEEEcCCCcccHHHHHHH
Q 005949 209 ---------RGLPLPIH------GDGSNVRSYLYCEDVAEAFECILHK---------GEVGHVYNVGTKKERRVIDVAKD 264 (668)
Q Consensus 209 ---------~~~~~~~~------~~~~~~~~~i~v~D~a~ai~~~~~~---------~~~~~~~ni~~~~~~s~~el~~~ 264 (668)
.+.++.++ ++|.+.|+|+|++|+|++++.+++. ...+++||++++.++++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~ 320 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHH
Confidence 23344443 3588999999999999999988864 12356899999999999999999
Q ss_pred HHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCcccCCHHHHHHHH-HHHHhhCCCc
Q 005949 265 ICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKT-IEWYTQNPDW 325 (668)
Q Consensus 265 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~-~~~~~~~~~~ 325 (668)
+.+.+|.+.+ +.....++.......+|++|+++ |||+|+++++|+|+++ +.|++.++..
T Consensus 321 i~~~~~~~~~--~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~ 381 (383)
T d1gy8a_ 321 ARKTTGHPIP--VRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNG 381 (383)
T ss_dssp HHHHHCCCCC--EEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTT
T ss_pred HHHHhCCCCc--eEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCccc
Confidence 9999998765 45555666666677889999975 9999999999999887 6899988754
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.6e-40 Score=329.68 Aligned_cols=293 Identities=21% Similarity=0.353 Sum_probs=238.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|||||||||||||++|++.|+++ ++.++++++.. ..|+.|.+.+.+++....+|+|+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~d~v~ 59 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD--------------------ELNLLDSRAVHDFFASERIDQVY 59 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT--------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCch--------------------hccccCHHHHHHHHhhcCCCEEE
Confidence 579999999999999999999999 67777766532 25899999999998878899999
Q ss_pred EcCccCCcc-cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCC--CCCCCCCCCCChhHHH
Q 005949 86 HFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVG--NHEASQLLPTNPYSAT 162 (668)
Q Consensus 86 h~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~--~~e~~~~~p~~~Y~~s 162 (668)
|+|+..... ....++.+++.+|+.||.+|+++|++.+ +++|||+||++|||.....+..+ ..+..+..|.++|+.+
T Consensus 60 ~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~s 138 (315)
T d1e6ua_ 60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIA 138 (315)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHH
T ss_pred EcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHH
Confidence 999875432 2345567788999999999999999987 99999999999999876543311 1112223344579999
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCC----ChHHH-----HHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPK-----FILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
|.++|++++.+.++++++++++||++||||++... .+... .......+..+.+.+++.+.++|+|++|++.
T Consensus 139 K~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~ 218 (315)
T d1e6ua_ 139 KIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218 (315)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHH
Confidence 99999999999999999999999999999976432 22222 2344456778888899999999999999999
Q ss_pred HHHHHHhcCC---------CCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHhCCCcc
Q 005949 234 AFECILHKGE---------VGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTSLGWSE 304 (668)
Q Consensus 234 ai~~~~~~~~---------~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~ 304 (668)
++..+++... ....+|++.+...++.++++.+.+.+|.+.. +.+.+.++.....+.+|++|+++|||+|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~--i~~~~~~~~~~~~~~~d~sk~k~Lg~~p 296 (315)
T d1e6ua_ 219 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFDASKPDGTPRKLLDVTRLHQLGWYH 296 (315)
T ss_dssp HHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE--EEEETTSCCCCSBCCBCCHHHHHTTCCC
T ss_pred HHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc--eEECCCCCCCCceeccCHHHHHHcCCCC
Confidence 9998886431 3467999999999999999999999998754 5566666766677789999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCC
Q 005949 305 RTIWEEGLRKTIEWYTQNP 323 (668)
Q Consensus 305 ~~~~~~~l~~~~~~~~~~~ 323 (668)
+++++|+|+++++||+++.
T Consensus 297 ~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 297 EISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp CCCHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHcC
Confidence 9999999999999999763
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.2e-38 Score=325.04 Aligned_cols=310 Identities=20% Similarity=0.218 Sum_probs=249.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc---CCccccCC---CcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC---SNLKNLIP---SKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~---~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
+|++||||||||||++|++.|+++ +++|++++|.... .....+.. ......++++.+|+.+.+.+...+...
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence 479999999999999999999999 7899999986432 11222211 122346889999999999999998778
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcC----CCcEEEEEcCccccCCCCCCcCCCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG----QIRRFIHVSTDEVYGETDEDAVVGNHEASQLLP 155 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p 155 (668)
++|+|||+|+.........++...+..|+.++.++++++++.. ...++++.||+.+|+..... .+|+++..|
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~----~~E~~~~~p 154 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHP 154 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS----BCTTSCCCC
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCC----CCCCCCCCC
Confidence 9999999999987766677889999999999999999987532 24578888888888776533 378888999
Q ss_pred CChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHH----HHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 156 TNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKF----ILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 156 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
.+.|+.+|..+|.++..+.++++++++++||++||||..........+ ...........+.+++.+.|+|+|++|+
T Consensus 155 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~ 234 (339)
T d1n7ha_ 155 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 234 (339)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehH
Confidence 999999999999999999999999999999999999986544333332 2333445556667889999999999999
Q ss_pred HHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceE--eccCCCCCCcccccChHHHHh-CCCcccCCH
Q 005949 232 AEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIK--FVENRPFNDQRYFLDDQKLTS-LGWSERTIW 308 (668)
Q Consensus 232 a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~ 308 (668)
++++..+++++.. ..+++..+...++.++++.+.+.++......+. ....+|.....+..|++|+++ |||+|++++
T Consensus 235 a~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~l 313 (339)
T d1n7ha_ 235 VEAMWLMLQQEKP-DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF 313 (339)
T ss_dssp HHHHHHHHTSSSC-CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred HHHHHHHHhcCCC-CccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCH
Confidence 9999999998765 466777788899999999999999986543333 233455566677889999975 999999999
Q ss_pred HHHHHHHHHHHhhC
Q 005949 309 EEGLRKTIEWYTQN 322 (668)
Q Consensus 309 ~~~l~~~~~~~~~~ 322 (668)
+++|+++++||.+.
T Consensus 314 e~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 314 EKLVKMMVDEDLEL 327 (339)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=1.5e-38 Score=324.39 Aligned_cols=309 Identities=27% Similarity=0.425 Sum_probs=246.9
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
||||||||||||++|++.|+++ +++|+++|+.........+.......+++++.+|++|.+.+.+++...++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999999999999999999999 68899988643322222222222346899999999999999999977789999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcC-ccccCCCCCCcC-------------CCCCCCCCC
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST-DEVYGETDEDAV-------------VGNHEASQL 153 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS-~~vyg~~~~~~~-------------~~~~e~~~~ 153 (668)
|+.........++...+++|+.||.+|++++.+.+ ++++|++|| ..+|+.....+. ....+..+.
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 99988766677888999999999999999999987 555555555 455554432211 112344556
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC---CChHHHHHHHHH-----cCCCceeecCCCceEec
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP---EKLIPKFILLAM-----RGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 225 (668)
.|.+.|+.+|...|.++..+.+.++....++|+.++||+.... ...++.++..+. .++++.++++|.+.|+|
T Consensus 159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 6788999999999999999999999999999999999876532 355666665554 36788889999999999
Q ss_pred eeHHHHHHHHHHHHhcC--CCCceEEEcC--CCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-C
Q 005949 226 LYCEDVAEAFECILHKG--EVGHVYNVGT--KKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-L 300 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~--~~~~~~ni~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-l 300 (668)
+|++|++++++.++++. ..+++||+.. +..+++.|+++.+.+.++.+.. +...+.++.....+.+|++|+++ |
T Consensus 239 ~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~d~~k~~~~L 316 (338)
T d1orra_ 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR--FTNLPVRESDQRVFVADIKKITNAI 316 (338)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC--EEEECCCSSCCSEECBCCHHHHHHH
T ss_pred ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce--eEeCCCCCCCcCeeeECHHHHHHHH
Confidence 99999999999998764 3578999954 4578999999999999998765 45556666666778889999985 9
Q ss_pred CCcccCCHHHHHHHHHHHHhh
Q 005949 301 GWSERTIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 301 G~~~~~~~~~~l~~~~~~~~~ 321 (668)
||+|+++++|+|+++++|++.
T Consensus 317 g~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 317 DWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp CCCCCSCHHHHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHc
Confidence 999999999999999999985
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-39 Score=333.54 Aligned_cols=270 Identities=19% Similarity=0.213 Sum_probs=216.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------------cccccccCChhHHHHHhhhcCCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------------EYGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------------~~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
++|||||||||||++|+++|+++||+| .++.+|++|.+++++.+++++||+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 478999999999999999999999854 456789999999999999999999
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC----cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI----LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~----~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|||+||.. ++..+..+|..++++|+.||.||+++|++.++ ++|++||+.|||.....| ..|+.+..
T Consensus 82 v~h~aa~~---~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~-------~~E~~~~~ 151 (357)
T d1db3a_ 82 VYNLGAMS---HVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP-------QKETTPFY 151 (357)
T ss_dssp EEECCCCC---TTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSS-------BCTTSCCC
T ss_pred EEEeeccc---ccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCC-------cCCCCCCC
Confidence 99999988 56777889999999999999999999999876 488899999998655554 55666777
Q ss_pred CCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh-----------hHHHHhhcccce-eecCC-----CcccHhh
Q 005949 511 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYNKV-VNIPN-----SMTVLDE 573 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~-~~~~~-----~~~~v~D 573 (668)
|.++||.||+++|++++.|.+.++++++++|++++|||+ .++.++..++.. ...++ +|+|++|
T Consensus 152 P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D 231 (357)
T d1db3a_ 152 PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231 (357)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeech
Confidence 889999999999999999988889999999999999995 223333344332 22222 7999999
Q ss_pred HHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhh-------------------------hh
Q 005949 574 LLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQA-------------------------KV 628 (668)
Q Consensus 574 ~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------------------------~~ 628 (668)
+|++++.++++..+++||+++++.+|+.|+++.+.+.+|....+...+..... ..
T Consensus 232 ~~~a~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (357)
T d1db3a_ 232 YVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYF 311 (357)
T ss_dssp HHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGC
T ss_pred HHHHHHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccC
Confidence 99999999998888999999999999999999999999865433211111000 00
Q ss_pred hccCCCCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 629 IVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 629 ~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+.+.....+|++|+++.+| +..+++|+|++++++
T Consensus 312 r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~ 348 (357)
T d1db3a_ 312 RPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN 348 (357)
T ss_dssp CCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred CCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 01112234679999999877 457999999999753
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-40 Score=327.68 Aligned_cols=269 Identities=16% Similarity=0.192 Sum_probs=217.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc------------------ccccCChhHHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG------------------KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~------------------~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
+|||||||+||||++|+++|+++|++|..+ ..|+.+.+.++.++. +||+|||+|+..
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~VihlAa~~--- 76 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI--EVDQIYHLASPA--- 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCC--CCSEEEECCSCC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHc--CCCEEEECcccC---
Confidence 589999999999999999999999987433 123333333333333 579999999987
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHH
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEEL 525 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~ 525 (668)
.+..+..++...+++|+.|+.+|+++|++.++++|++||++||+.....|. .+....+..|..|.++||.||.++|.+
T Consensus 77 ~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~--~e~~~~~~~~~~p~~~Y~~sK~~~E~~ 154 (312)
T d2b69a1 77 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQ--SEDYWGHVNPIGPRACYDEGKRVAETM 154 (312)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSB--CTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred CchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCC--CccccCCCCCCCCccHHHHHHHHHHHH
Confidence 565667788899999999999999999999999999999999987665552 112233445667889999999999999
Q ss_pred HHhccCeeEeEEeeeecCCCCChh----------hHHHHhhcccceeecCC-----CcccHhhHHHHHHHHHhccCCcee
Q 005949 526 LKEYDNVCTLRVRMPISSDLNNPR----------NFITKISRYNKVVNIPN-----SMTVLDELLPISIEMAKRNLRGIW 590 (668)
Q Consensus 526 ~~~~~~~~~l~~~~~r~~~~~g~~----------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~~~g~~ 590 (668)
++.|.+.++++++++|++++|||+ .++.+++.+++....+. +|+|++|++++++.++++...++|
T Consensus 155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~~~~~ 234 (312)
T d2b69a1 155 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPV 234 (312)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCE
T ss_pred HHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhccCCce
Confidence 999988889999999999999986 35666777766554332 899999999999999998899999
Q ss_pred eecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 591 NFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 591 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
|++++..+++.++++.+++.+|.+.++...+. ...+.....+|++|+++.+| +..+|+++|+++++|++
T Consensus 235 n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~ 305 (312)
T d2b69a1 235 NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE------AQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305 (312)
T ss_dssp EESCCCEEEHHHHHHHHHHHHTCCCCEEEECC------CTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred EecCCcccchhhHHHHHHHHhCCCCceEECCC------CCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999998876543322 12233456789999998877 55799999999999874
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.9e-39 Score=332.07 Aligned_cols=279 Identities=16% Similarity=0.140 Sum_probs=225.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
||||||||+||||++|+++|++.|+++ +++.+|++|.+.+.+++++.+||+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 799999999999999999999999853 3456899999999999999999999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC----------cEEEEecceeEeecCCCCC---CCCCCCCCC
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI----------LMMNYATGCIFEYDAAHPE---GSGIGYKEE 505 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~----------~~v~~sS~~vy~~~~~~p~---~~~~~~~ee 505 (668)
||.+ .+..+..+|..++++|+.||.+++++|++.++ +++++||+.|||.....+. ....++.+|
T Consensus 81 Aa~~---~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e 157 (361)
T d1kewa_ 81 AAES---HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCC---CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred cccc---chhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence 9987 67777889999999999999999999988643 6999999999987654431 112345667
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hHHHHhhcccceeecCC-----CcccHh
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTVLD 572 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~ 572 (668)
+++..|.+.||.||.++|++++.|.+.++++++++|++++|||+ .++.+++.+++....+. +|+|++
T Consensus 158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~ 237 (361)
T d1kewa_ 158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHH
Confidence 77888999999999999999999988889999999999999996 45666677766554433 789999
Q ss_pred hHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHh--hhhhccCCCCCccChhHHHhhcC-
Q 005949 573 ELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQ--AKVIVAPRSNNEMDASKLKKEFP- 648 (668)
Q Consensus 573 D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ld~~k~~~~~g- 648 (668)
|+|++++.++++. .+++|||++++.+|+.|+++.+.+.++............. ....+.+.....+|++|+++.+|
T Consensus 238 D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw 317 (361)
T d1kewa_ 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGW 317 (361)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCC
Confidence 9999999999876 5679999999999999999999988765433221111100 01112233345789999998766
Q ss_pred -CccChHHHHHHHHhccC
Q 005949 649 -ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 649 -~~~~~~~~l~~~~~~~~ 665 (668)
+..+++++|+++++|+.
T Consensus 318 ~P~~~l~e~i~~ti~w~~ 335 (361)
T d1kewa_ 318 KPLETFESGIRKTVEWYL 335 (361)
T ss_dssp CCSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 55899999999999863
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.8e-38 Score=320.55 Aligned_cols=266 Identities=18% Similarity=0.207 Sum_probs=218.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------------cccccccCChhHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------------EYGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------------~~~~~D~~d~~~~~~~l~~~~~d 433 (668)
|||||||||||||++|+++|+++||.| .++.+|+.+......... .+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR--GVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence 799999999999999999999999853 234566667666665544 569
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
.|+|+|+.. .......++...+++|+.|+.+|+++|+++++ ++|+.||+++|+.....| .+|+.+..|.
T Consensus 79 ~vi~~a~~~---~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~-------~~E~~~~~p~ 148 (322)
T d1r6da_ 79 AIVHFAAES---HVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS-------WTESSPLEPN 148 (322)
T ss_dssp EEEECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSC-------BCTTSCCCCC
T ss_pred eEEeecccc---cccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCC-------CCCCCCCCCC
Confidence 999999977 56677888999999999999999999999998 688889999998876665 5667778888
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hHHHHhhcccceeecCC-----CcccHhhHHHHHH
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTVLDELLPISI 579 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~ 579 (668)
+.||.+|.++|.+++.+.+.++++++++|++++|||+ .++.++..+++....+. +|+|++|+|++++
T Consensus 149 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~ 228 (322)
T d1r6da_ 149 SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIA 228 (322)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHH
Confidence 9999999999999999988889999999999999997 34566666666554433 8999999999999
Q ss_pred HHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHH
Q 005949 580 EMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDS 656 (668)
Q Consensus 580 ~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~ 656 (668)
.+++++ .+++||+++++.+|+.|+++.+.+.+|.+........ ..+.......+|++|+++.+| +..++++|
T Consensus 229 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lg~~p~~~~eeg 303 (322)
T d1r6da_ 229 LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA-----DRKGHDLRYSLDGGKIERELGYRPQVSFADG 303 (322)
T ss_dssp HHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC-----CCTTCCCBCCBCCHHHHHHHCCCCCSCHHHH
T ss_pred HHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecC-----CCCCCCceeeeCHHHHHHHHCCCCCCCHHHH
Confidence 999987 5669999999999999999999999998754321110 112222345789999998877 45789999
Q ss_pred HHHHHhccCC
Q 005949 657 LIKYVFEPNK 666 (668)
Q Consensus 657 l~~~~~~~~~ 666 (668)
|+++++|+++
T Consensus 304 I~~~i~w~~~ 313 (322)
T d1r6da_ 304 LARTVRWYRE 313 (322)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=5.9e-36 Score=307.09 Aligned_cols=311 Identities=19% Similarity=0.280 Sum_probs=244.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+++|||||||||||||++|++.|+++ +++|++++|...... ..+.......+++++.+|++|++.+.+++....+|+
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~-~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVP-SLFETARVADGMQSEIGDIRDQNKLLESIREFQPEI 82 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSS-CHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccH-HHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhh
Confidence 46899999999999999999999999 678999988643211 111111223579999999999999999987788999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|+|+|+......++.++...+.+|+.|+.++++++++.+....+++.||..+|........ .+|+.+..|.++|+.+|
T Consensus 83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWG--YRENEAMGGYDPYSNSK 160 (356)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSC--BCTTSCBCCSSHHHHHH
T ss_pred hhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccc--cccccccCCCCcccccc
Confidence 9999999887777788899999999999999999999876677777777666665554332 35667788899999999
Q ss_pred HHHHHHHHHHHH---------hcCCCEEEEeeCceeCCCCCC-CChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHH
Q 005949 164 AGAEMLVMAYGR---------SYGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAE 233 (668)
Q Consensus 164 ~~~E~~~~~~~~---------~~~~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 233 (668)
...|..+..++. ++++.++++||+++|||++.. .++++.+++....+..+ +++.+.+.++++|++|++.
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHH
T ss_pred ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCce-EEeeccccccccccccccc
Confidence 999999987765 346889999999999998744 46777788877666554 5688899999999999999
Q ss_pred HHHHHHhcCC-----CCceEE--EcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCCCcccccChHHHHh-CCCccc
Q 005949 234 AFECILHKGE-----VGHVYN--VGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFNDQRYFLDDQKLTS-LGWSER 305 (668)
Q Consensus 234 ai~~~~~~~~-----~~~~~n--i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~ 305 (668)
|+..++++.. .+...+ ...+...++.++++.+.+.++....... ....+|.....+.+|++|+++ |||+|+
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~d~skak~~LGw~P~ 318 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL-DGNAHPHEAHYLKLDCSKAKMQLGWHPR 318 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------CCCCCCBCCHHHHHHHCCCCC
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEE-cCCCCCCCcCeeeEcHHHHHHHHCCCcC
Confidence 9998877532 122333 3345678999999999999998765322 123344555667889999974 999999
Q ss_pred CCHHHHHHHHHHHHhh
Q 005949 306 TIWEEGLRKTIEWYTQ 321 (668)
Q Consensus 306 ~~~~~~l~~~~~~~~~ 321 (668)
++++++|+++++||++
T Consensus 319 ~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 319 WNLNTTLEYIVGWHKN 334 (356)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999999999999986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-37 Score=314.68 Aligned_cols=268 Identities=15% Similarity=0.146 Sum_probs=215.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
||||||||+||||++|++.|+++||+| .++.+|++|.+.+.+.++..+||+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 799999999999999999999999854 4567899999999999998889999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
||+. .+..+..+|...+++|+.||.+||++|++.++ ++|+.||+.||+.....+ ..|++.+..|.+.|+.
T Consensus 81 Aa~~---~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~------~~e~~~~~~p~~~Y~~ 151 (338)
T d1udca_ 81 AGLK---AVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIP------YVESFPTGTPQSPYGK 151 (338)
T ss_dssp CSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSS------BCTTSCCCCCSSHHHH
T ss_pred CCcc---chhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccc------cccccccCCCcchHHH
Confidence 9987 67777888999999999999999999999998 577888889987665544 4566666678899999
Q ss_pred hHHHHHHHHHhcc-CeeEeEEeeeecCCCCChh--------------hHHHH----hhccccee-ecC-----------C
Q 005949 518 TKAMVEELLKEYD-NVCTLRVRMPISSDLNNPR--------------NFITK----ISRYNKVV-NIP-----------N 566 (668)
Q Consensus 518 sK~~~E~~~~~~~-~~~~l~~~~~r~~~~~g~~--------------~~~~~----~~~~~~~~-~~~-----------~ 566 (668)
+|..+|+++.++. +..+++++++|++++|||+ .++.. +...+... ..+ .
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~r 231 (338)
T d1udca_ 152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231 (338)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEE
T ss_pred HHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCcee
Confidence 9999999998754 3458999999999999974 13332 22222222 111 2
Q ss_pred CcccHhhHHHHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhH
Q 005949 567 SMTVLDELLPISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASK 642 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k 642 (668)
+|+|++|++.++..++... .+++||+++++++|+.|+++.+.+.+|.+.++...+. .+.+.....+|++|
T Consensus 232 d~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~k 305 (338)
T d1udca_ 232 DYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR------REGDLPAYWADASK 305 (338)
T ss_dssp CEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECC------CTTCCSBCCBCCHH
T ss_pred eEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCC------CCCCCCEeeECHHH
Confidence 6899999999888776532 4569999999999999999999999998766433321 12334456789999
Q ss_pred HHhhcC--CccChHHHHHHHHhccCC
Q 005949 643 LKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 643 ~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
+++.+| +..+++++|+++++|+.+
T Consensus 306 ~~~~lgwkp~~~l~egi~~ti~w~~~ 331 (338)
T d1udca_ 306 ADRELNWRVTRTLDEMAQDTWHWQSR 331 (338)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCcCCCHHHHHHHHHHHHHh
Confidence 999777 458999999999998754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=9.3e-37 Score=311.18 Aligned_cols=275 Identities=16% Similarity=0.126 Sum_probs=219.5
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhcCCCEEE
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
+||||||||||||||++|+++|+++|++| .++.+|++|.+.+..++..+ |.|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~--~~v~ 78 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA--DAIV 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC--SEEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhh--hhhh
Confidence 48999999999999999999999999864 34458999999999998876 9999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCC---CC--CCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAH---PE--GSGIGYKEEDTPNFT 511 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~---p~--~~~~~~~ee~~~~~~ 511 (668)
|+|+.. ....+..++.+++++|+.|+.+|+++|++.+.+++++||+.+|+..... +. ........|+.+..|
T Consensus 79 ~~a~~~---~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p 155 (346)
T d1oc2a_ 79 HYAAES---HNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP 155 (346)
T ss_dssp ECCSCC---CHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred hhhhcc---cccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCC
Confidence 999987 5666778999999999999999999999999999999999999753211 10 011223445556677
Q ss_pred CCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hHHHHhhcccceeecCC-----CcccHhhHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPN-----SMTVLDELLPIS 578 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~ 578 (668)
.+.||.+|+++|++++.|.+..+++++++|++++|||+ .++..+..+.+....++ +|+|++|+|+++
T Consensus 156 ~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 156 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence 89999999999999999988889999999999999986 34555556655544433 899999999999
Q ss_pred HHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--Cc-cChH
Q 005949 579 IEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--EL-LSIK 654 (668)
Q Consensus 579 ~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~-~~~~ 654 (668)
+.+++++ .++.||+++++.+++.++++.+.+.++.......... ..+.......+|++|+++.+| +. .+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~ 310 (346)
T d1oc2a_ 236 WAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT-----DRAGHDLRYAIDASKLRDELGWTPQFTDFS 310 (346)
T ss_dssp HHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEEC-----CCTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred HHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECC-----CCCCCCceeeeCHHHHHHHHCCCCcCCCHH
Confidence 9999876 6789999999999999999999999987643221110 111222344679999999887 32 4799
Q ss_pred HHHHHHHhccCC
Q 005949 655 DSLIKYVFEPNK 666 (668)
Q Consensus 655 ~~l~~~~~~~~~ 666 (668)
++|++++.|+++
T Consensus 311 e~i~~ti~w~~~ 322 (346)
T d1oc2a_ 311 EGLEETIQWYTD 322 (346)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-36 Score=310.00 Aligned_cols=279 Identities=14% Similarity=0.101 Sum_probs=216.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-c-------------------ccccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-P-------------------FEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-~-------------------v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
|||||||||||||++|+++|+++|+ + ++++.+|+++.+++.+.+.. ++|+|||+|+..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~-~~d~Vih~a~~~- 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-KCDVVLPLVAIA- 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-HCSEEEECBCCC-
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh-CCCccccccccc-
Confidence 7999999999999999999999995 3 34678899887766553333 469999999988
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
.+.....++...+++|+.|+.+++++|.+.+++.++.||+.+|+........+..+...++.+..|.+.|+.||.++|
T Consensus 79 --~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E 156 (342)
T d2blla1 79 --TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD 156 (342)
T ss_dssp --CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred --cccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchh
Confidence 566677888899999999999999999999999999999999987665542212222333445566788999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChh----------------hHHHHhhcccceeecCC-----CcccHhhHHHHHHHHH
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPR----------------NFITKISRYNKVVNIPN-----SMTVLDELLPISIEMA 582 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~----------------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~ 582 (668)
++++.+.+.++++++++|++.+|||+ .|+.+++.+++....++ +|+|++|+|++++.++
T Consensus 157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~ 236 (342)
T d2blla1 157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236 (342)
T ss_dssp HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeeh
Confidence 99999988889999999999999985 45666777776554432 7999999999999999
Q ss_pred hcc----CCceeeecCCC-ccCHHHHHHHHHhhcCCCCCCCCCCHHHhh---------hhhccCCCCCccChhHHHhhcC
Q 005949 583 KRN----LRGIWNFTNPG-VVSHNEILEMYKKYINPEFKWVNFTLEEQA---------KVIVAPRSNNEMDASKLKKEFP 648 (668)
Q Consensus 583 ~~~----~~g~~ni~~~~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~~~ld~~k~~~~~g 648 (668)
+++ .+++||+++++ .+|+.|+++.+.+.+|........+..... .....+.....+|++|+++.+|
T Consensus 237 ~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg 316 (342)
T d2blla1 237 ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLD 316 (342)
T ss_dssp HCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHC
T ss_pred hhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHHC
Confidence 863 46799999875 479999999999999977655443321100 0011112344679999999878
Q ss_pred --CccChHHHHHHHHhccCC
Q 005949 649 --ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 649 --~~~~~~~~l~~~~~~~~~ 666 (668)
+..+++|+|+++++|+.+
T Consensus 317 w~P~~sleegl~~ti~~y~~ 336 (342)
T d2blla1 317 WEPKIDMQETIDETLDFFLR 336 (342)
T ss_dssp CCCCCCHHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHh
Confidence 457899999999998743
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.5e-36 Score=309.28 Aligned_cols=272 Identities=18% Similarity=0.218 Sum_probs=215.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccc------------------ccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
-|||||||||||||++|+++|+++||+|. +..+|+++.+.+.+.++++ |+|||+|+...
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~Vih~a~~~~- 91 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGV--DHVFNLAADMG- 91 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTC--SEEEECCCCCC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcC--CeEeecccccc-
Confidence 48999999999999999999999999762 3446788888888877765 99999998762
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
........+...+..|+.++.+|+++|+++++ ++|+.||+.+|+.....+..+......|+.+..|.+.||.||+++|
T Consensus 92 -~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E 170 (363)
T d2c5aa1 92 -GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATE 170 (363)
T ss_dssp -CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHH
T ss_pred -cccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHH
Confidence 22333567778889999999999999999999 5777888899987766552222223445567788899999999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChhh-------------HHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhcc
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPRN-------------FITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~~-------------~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~ 585 (668)
++++.|.+.++++++++|++++|||+. +.............+ .+|+|++|++++++.+++++
T Consensus 171 ~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~ 250 (363)
T d2c5aa1 171 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 250 (363)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC
Confidence 999999888899999999999999862 111122222222222 27999999999999999988
Q ss_pred CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 586 LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 586 ~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+++||+++++.+|+.|+++.+.+.+|.+.++...+. +.......+|++|+++.+| +..+|+++|+++++|
T Consensus 251 ~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~-------~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w 323 (363)
T d2c5aa1 251 FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-------PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 323 (363)
T ss_dssp CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECC-------CCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHH
T ss_pred CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCC-------CCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 8999999999999999999999999998876543322 2223445689999999877 457999999999998
Q ss_pred cC
Q 005949 664 PN 665 (668)
Q Consensus 664 ~~ 665 (668)
++
T Consensus 324 ~~ 325 (363)
T d2c5aa1 324 IK 325 (363)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=2.8e-34 Score=284.22 Aligned_cols=273 Identities=23% Similarity=0.274 Sum_probs=232.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||++|+++|.++ +++|++++|.. +|+.|.+.+.+++...++|+|||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~~~d~vih 58 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQD---------------------LDITNVLAVNKFFNEKKPNVVIN 58 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTT---------------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechh---------------------ccCCCHHHHHHHHHHcCCCEEEe
Confidence 57999999999999999999998 78999998841 48999999999998779999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+|+......+...+......|+..+..+.+.+.... ..++++||..+|+.....+. .|.++..|...|+.+|...
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~~~---~e~~~~~~~~~~~~~k~~~ 133 (281)
T d1vl0a_ 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKEPI---TEFDEVNPQSAYGKTKLEG 133 (281)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSSCB---CTTSCCCCCSHHHHHHHHH
T ss_pred eccccccccccccchhhccccccccccccccccccc--ccccccccceeeeccccccc---cccccccchhhhhhhhhHH
Confidence 999988777777888889999999999999998865 78999999999988765544 6777788899999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCCCc
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEVGH 246 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~ 246 (668)
|.+++.+ +.+.+++||++||||+. ++...++..+..+..+.+.++ +.++++|++|+++++..++++... +
T Consensus 134 e~~~~~~----~~~~~i~R~~~vyG~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~~~~~~~~~~~~~~-g 203 (281)
T d1vl0a_ 134 ENFVKAL----NPKYYIVRTAWLYGDGN---NFVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLKVIDEKNY-G 203 (281)
T ss_dssp HHHHHHH----CSSEEEEEECSEESSSS---CHHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHHHHHHTCC-E
T ss_pred HHHHHHh----CCCccccceeEEeCCCc---ccccchhhhhccCCceeecCC--ceeccchhhhhhhhhhhhhhhccc-C
Confidence 9988654 78999999999999986 678888888888887777654 889999999999999999998765 5
Q ss_pred eEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCCCCC-----CcccccChHHHHh-CCCcccCCHHHHHHHHHHHHh
Q 005949 247 VYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENRPFN-----DQRYFLDDQKLTS-LGWSERTIWEEGLRKTIEWYT 320 (668)
Q Consensus 247 ~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~~~~ 320 (668)
+||+++++.+|+.|+++.+++.+|.+.. +.+.+...+. +....+|++|+++ +||+|+ +|+++|+++++|++
T Consensus 204 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~--i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 204 TFHCTCKGICSWYDFAVEIFRLTGIDVK--VTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp EEECCCBSCEEHHHHHHHHHHHHCCCCE--EEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred ceeEeCCCccchHHHHHHHHHHhCCCce--EEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 9999999999999999999999998764 3322222221 1234589999975 999998 89999999999986
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3e-35 Score=297.09 Aligned_cols=270 Identities=16% Similarity=0.141 Sum_probs=214.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
++|||||||||||++|+++|+++||+| .++.+|++|.+.+.+.+....+++++|+|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 379999999999999999999999865 24578999999999999999999999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEE-EEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMM-NYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v-~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
+.. .......++..+++.|+.|+.+++++|+++++ +++ +.||+.+|+.....+ .+|+++..|.+.|+.
T Consensus 81 ~~~---~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~-------~~E~~~~~p~~~Y~~ 150 (321)
T d1rpna_ 81 AQS---FVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAER-------QDENTPFYPRSPYGV 150 (321)
T ss_dssp SCC---CHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSS-------BCTTSCCCCCSHHHH
T ss_pred ccc---cccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCC-------CCCCCCccccChhHH
Confidence 977 56677788899999999999999999999987 344 445556665544433 567788888999999
Q ss_pred hHHHHHHHHHhccCeeEeEEeeeecCCCCChh-----------hHHHHhhccc-ceeecCC-----CcccHhhHHHHHHH
Q 005949 518 TKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISRYN-KVVNIPN-----SMTVLDELLPISIE 580 (668)
Q Consensus 518 sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~-~~~~~~~-----~~~~v~D~a~~~~~ 580 (668)
+|.++|+++.+|.+.++++++++|++++|||. +++.++..++ .....++ +|+|++|+|++++.
T Consensus 151 sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~ 230 (321)
T d1rpna_ 151 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL 230 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHH
Confidence 99999999999988889999999999999995 1222333333 2322322 79999999999999
Q ss_pred HHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHH
Q 005949 581 MAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLI 658 (668)
Q Consensus 581 ~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~ 658 (668)
+++++..+.||+++++..|+.++++.+.+.+|.+........+ ....+.+.....+|++|+++.+| +..+++|+|+
T Consensus 231 ~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~ 308 (321)
T d1rpna_ 231 MLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP--AFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIR 308 (321)
T ss_dssp HHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECG--GGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHH
T ss_pred HHhcCCcCCceecccccceehhhhHHHHHHhCCCccceeecCC--CCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHH
Confidence 9999889999999999999999999999999987542211111 11112233345679999999877 4478999999
Q ss_pred HHHhccC
Q 005949 659 KYVFEPN 665 (668)
Q Consensus 659 ~~~~~~~ 665 (668)
+++++..
T Consensus 309 ~tv~~~l 315 (321)
T d1rpna_ 309 MMVEADL 315 (321)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=6e-35 Score=296.89 Aligned_cols=304 Identities=18% Similarity=0.148 Sum_probs=223.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCC-cCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPS-KASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+|+|||||||||||++|+++|+++ |++|+++.|.... ..++..... ........+.+|+.|.+.+.+++ .++|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~~~~~ 86 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI--KGAAG 86 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT--TTCSE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc--ccchh
Confidence 689999999999999999999999 6888887774321 111111111 11223456789999999999888 78999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcC-C--C--------------
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAV-V--G-------------- 146 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~-~--~-------------- 146 (668)
|+|+|+.... ..++...+.+|+.||.+++++|.+.+.+++|||+||+.+++....... . .
T Consensus 87 v~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 163 (342)
T d1y1pa1 87 VAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp EEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred hhhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccc
Confidence 9999997653 345677889999999999999999766999999999765443221111 0 0
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFP---EKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
..|..+..|.++|+.+|..+|.+++.+.+++ +++++++||+++|||...+ ...+..+++.+.+++.... ..+.+
T Consensus 164 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~ 242 (342)
T d1y1pa1 164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMP 242 (342)
T ss_dssp SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHTCC
T ss_pred ccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCCcc
Confidence 1244455566789999999999999998775 4778899999999996432 3467778888888775544 34556
Q ss_pred eEeceeHHHHHHHHHHHHhcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-CCCCcccccChHHHHhC
Q 005949 222 VRSYLYCEDVAEAFECILHKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-PFNDQRYFLDDQKLTSL 300 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~l 300 (668)
.++|+|++|+|++++.+++++..++.|++++++..++.|+++.|.+.++.... ........ .........+.++++.|
T Consensus 243 ~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~-~~~~~~~~~~~~~~~~~~s~~~~k~l 321 (342)
T d1y1pa1 243 PQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF-PADFPDQGQDLSKFDTAPSLEILKSL 321 (342)
T ss_dssp SEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCC-CCCCCCCCCCCCEECCHHHHHHHHHT
T ss_pred ceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcC-CccCCccCcccccccchHHHHHHHHc
Confidence 78999999999999999998887788889989999999999999998843221 11111111 11111122334556779
Q ss_pred CCcccCCHHHHHHHHHHH
Q 005949 301 GWSERTIWEEGLRKTIEW 318 (668)
Q Consensus 301 G~~~~~~~~~~l~~~~~~ 318 (668)
||.+.++++|+|+++++.
T Consensus 322 g~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 322 GRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp TCCSCCCHHHHHHHHHCC
T ss_pred CCCCCcCHHHHHHHHHHh
Confidence 999999999999999873
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.9e-35 Score=300.95 Aligned_cols=269 Identities=15% Similarity=0.092 Sum_probs=217.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------ccccccCChhHHHHHhhhcCCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------YGKGRLEDCSSLIADVQSVKPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------~~~~D~~d~~~~~~~l~~~~~d~ 434 (668)
++|||||||||||++|+++|+++||+|. ++.+|+.|.......... ++.
T Consensus 17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~~~ 94 (341)
T d1sb8a_ 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG--VDY 94 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT--CSE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc--ccc
Confidence 5899999999999999999999998753 345677777766655554 599
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGS 513 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~ 513 (668)
|+|+++.. .+..+..++...+++|+.|+.+|+++|+++++ ++|+.||+.|||.....| .+|+.+..|.+
T Consensus 95 v~~~~a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~-------~~E~~~~~p~~ 164 (341)
T d1sb8a_ 95 VLHQAALG---SVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP-------KVEDTIGKPLS 164 (341)
T ss_dssp EEECCSCC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSS-------BCTTCCCCCCS
T ss_pred cccccccc---cccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCC-------ccCCCCCCCCC
Confidence 99999977 66777889999999999999999999999998 888899999998766655 67778888999
Q ss_pred cchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh------------hHHHHhhcccceeecCC-----CcccHhhHHH
Q 005949 514 FYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNIPN-----SMTVLDELLP 576 (668)
Q Consensus 514 ~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~~~-----~~~~v~D~a~ 576 (668)
.|+.+|.++|+++..+.+..+++++++|++++|||. .++.+++.+++....+. +|+|++|+|.
T Consensus 165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~ 244 (341)
T d1sb8a_ 165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 244 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence 999999999999999988889999999999999985 34456676766555432 8999999999
Q ss_pred HHHHHHhcc---CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--Ccc
Q 005949 577 ISIEMAKRN---LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELL 651 (668)
Q Consensus 577 ~~~~~~~~~---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~ 651 (668)
++..++... .+++||++++..+|+.|+++.+++.++.+....... .......+.+.....+|++|+++.+| +..
T Consensus 245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~ 323 (341)
T d1sb8a_ 245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE-PVYRDFREGDVRHSLADISKAAKLLGYAPKY 323 (341)
T ss_dssp HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC-CEEECCCTTCCSBCCBCCHHHHHHTCCCCCC
T ss_pred hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhcccccccccc-ccccCCCCCCcCeeeeCHHHHHHHHCCCcCC
Confidence 999998754 567999999999999999999999988653221111 10111112233345789999999877 557
Q ss_pred ChHHHHHHHHhccC
Q 005949 652 SIKDSLIKYVFEPN 665 (668)
Q Consensus 652 ~~~~~l~~~~~~~~ 665 (668)
++++||+++++|+.
T Consensus 324 sl~~gi~~ti~wy~ 337 (341)
T d1sb8a_ 324 DVSAGVALAMPWYI 337 (341)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 89999999999874
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=3.3e-35 Score=290.98 Aligned_cols=266 Identities=20% Similarity=0.185 Sum_probs=222.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc---cccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceeh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY---GKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRT 460 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~---~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~ 460 (668)
|||||||||||||++|+++|.++||+|.. -..|++|.+++++++++++||+|||+|+.. .+..+...+......
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~---~~~~~~~~~~~~~~~ 78 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHT---AVDKCEEQYDLAYKI 78 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHHHCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeecccc---ccccccccchhhccc
Confidence 79999999999999999999999998744 346889999999999999999999999988 677778888889999
Q ss_pred hhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeee
Q 005949 461 NVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMP 540 (668)
Q Consensus 461 Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~ 540 (668)
|+..+.++++.+......+++.||+.+|+.....| +.|+ .+..+.+.|+.+|..+|+++..+ +.+.+++
T Consensus 79 n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~------~~e~-~~~~~~~~~~~~k~~~e~~~~~~----~~~~~i~ 147 (281)
T d1vl0a_ 79 NAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEP------ITEF-DEVNPQSAYGKTKLEGENFVKAL----NPKYYIV 147 (281)
T ss_dssp HTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSC------BCTT-SCCCCCSHHHHHHHHHHHHHHHH----CSSEEEE
T ss_pred ccccccccccccccccccccccccceeeecccccc------cccc-ccccchhhhhhhhhHHHHHHHHh----CCCcccc
Confidence 99999999999999999999999999998776665 3444 44567799999999999999774 4578899
Q ss_pred ecCCCCChh-----hHHHHhhcccceeecCC---CcccHhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcC
Q 005949 541 ISSDLNNPR-----NFITKISRYNKVVNIPN---SMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYIN 612 (668)
Q Consensus 541 r~~~~~g~~-----~~~~~~~~~~~~~~~~~---~~~~v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g 612 (668)
|++++|||. .++..+..++.....++ +++|++|+++++..++++...|+||+++++.+|+.|+++.+++.+|
T Consensus 148 R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~~~~~~~~~s~~e~~~~i~~~~g 227 (281)
T d1vl0a_ 148 RTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTG 227 (281)
T ss_dssp EECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEEECCCBSCEEHHHHHHHHHHHHC
T ss_pred ceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcccCceeEeCCCccchHHHHHHHHHHhC
Confidence 999999997 23444444444333333 8999999999999999998889999999999999999999999999
Q ss_pred CCCCCCCCCHHHhhhhhccCCC-CCccChhHHHhhcC-CccChHHHHHHHHhccC
Q 005949 613 PEFKWVNFTLEEQAKVIVAPRS-NNEMDASKLKKEFP-ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~-~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~ 665 (668)
.+..+.+++..+. .....|| +.+||++|+++.+| ++++|++||++++++++
T Consensus 228 ~~~~i~~i~~~~~--~~~a~rp~~~~ld~~k~~~~~g~~~~~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 228 IDVKVTPCTTEEF--PRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYIDLLQ 280 (281)
T ss_dssp CCCEEEEECSTTS--CCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHHT
T ss_pred CCceEEeccHHHc--CCcCCCccccccCHHHHHHHhCCCCCCHHHHHHHHHHHhc
Confidence 9987766654332 1233343 45789999999999 77799999999999875
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-35 Score=297.90 Aligned_cols=270 Identities=19% Similarity=0.200 Sum_probs=216.2
Q ss_pred cEE-EEEcCCcchhHHHHHHHHHcCCcc------------------------------cccccccCChhHHHHHhhhcCC
Q 005949 384 MKF-LIYGRTGWIGGLLGKLCEKEGIPF------------------------------EYGKGRLEDCSSLIADVQSVKP 432 (668)
Q Consensus 384 mkv-li~G~~G~iG~~l~~~l~~~g~~v------------------------------~~~~~D~~d~~~~~~~l~~~~~ 432 (668)
+|| ||||||||||++|+++|+++||+| .++.+|++|.+.+.+++.++++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 378 999999999999999999999865 3456799999999999999999
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC----cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI----LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~----~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
++|+|+|+.. .+.....++..++++|+.||.+|+++|+++++ +++++||+.|||.....| ..|+.+
T Consensus 81 ~~v~~~~a~~---~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~-------~~E~~~ 150 (347)
T d1t2aa_ 81 TEIYNLGAQS---HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP-------QKETTP 150 (347)
T ss_dssp SEEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSS-------BCTTSC
T ss_pred ceeeeeeecc---ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCC-------CCCCCC
Confidence 9999999977 67777888888999999999999999999875 588999999998655554 556677
Q ss_pred CCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh--------hH----HHHhhcccceeecCC-----CcccH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------NF----ITKISRYNKVVNIPN-----SMTVL 571 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------~~----~~~~~~~~~~~~~~~-----~~~~v 571 (668)
..|.++||.||.++|++++.|.+.++++++++|++++|||+ .+ ........+....+. +|+|+
T Consensus 151 ~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v 230 (347)
T d1t2aa_ 151 FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 230 (347)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence 78889999999999999999988889999999999999985 12 222223333333322 89999
Q ss_pred hhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhh---------------hhhccCCCCC
Q 005949 572 DELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQA---------------KVIVAPRSNN 636 (668)
Q Consensus 572 ~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---------------~~~~~~~~~~ 636 (668)
+|++++++.++++...+.|+++.....++.++.+.+...++........+..... ...+......
T Consensus 231 ~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~ 310 (347)
T d1t2aa_ 231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFL 310 (347)
T ss_dssp HHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBC
T ss_pred cHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEe
Confidence 9999999999998888899999999999999999999998887543322211000 0001111233
Q ss_pred ccChhHHHhhcC--CccChHHHHHHHHhc
Q 005949 637 EMDASKLKKEFP--ELLSIKDSLIKYVFE 663 (668)
Q Consensus 637 ~ld~~k~~~~~g--~~~~~~~~l~~~~~~ 663 (668)
.+|++|+++.+| +..+|+|+|++++++
T Consensus 311 ~~d~skak~~Lgw~P~~sl~e~i~~~I~~ 339 (347)
T d1t2aa_ 311 QGDCTKAKQKLNWKPRVAFDELVREMVHA 339 (347)
T ss_dssp CBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred eECHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 579999999877 457999999999864
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.7e-35 Score=296.23 Aligned_cols=269 Identities=15% Similarity=0.126 Sum_probs=209.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
.|||||||||||++|+++|+++|++| .++.+|++|.+.++.+++..+||+|||+|
T Consensus 3 ~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA 82 (347)
T d1z45a2 3 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA 82 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence 49999999999999999999999855 34668999999999999999999999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhh
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKT 518 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~s 518 (668)
|.. .+.....++..++.+|+.|+.+|+++|++.++ +++++||++|||.....+ .....+|+.+..|.++||.|
T Consensus 83 a~~---~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~---~~~~~~e~~~~~p~~~Y~~s 156 (347)
T d1z45a2 83 GLK---AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFP---NMIPIPEECPLGPTNPYGHT 156 (347)
T ss_dssp SCC---CHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGST---TCCSBCTTSCCCCCSHHHHH
T ss_pred ccc---cccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCC---CCCccccccCCCCCChhHhH
Confidence 987 56667788899999999999999999999998 688889999998765443 11124566777788999999
Q ss_pred HHHHHHHHHhcc--CeeEeEEeeeecCCCCChh--------------hHHHHh----hcccc-eeecC-----------C
Q 005949 519 KAMVEELLKEYD--NVCTLRVRMPISSDLNNPR--------------NFITKI----SRYNK-VVNIP-----------N 566 (668)
Q Consensus 519 K~~~E~~~~~~~--~~~~l~~~~~r~~~~~g~~--------------~~~~~~----~~~~~-~~~~~-----------~ 566 (668)
|.++|++++.+. ...+++++++|++++||+. .++..+ ..... ....+ .
T Consensus 157 K~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~ 236 (347)
T d1z45a2 157 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 236 (347)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence 999999999874 3468999999999888763 133222 21222 21111 1
Q ss_pred CcccHhhHHHHHHHHHhcc--------CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCcc
Q 005949 567 SMTVLDELLPISIEMAKRN--------LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEM 638 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~~--------~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 638 (668)
+++++.|++.+++.+++.. ..++||+++++++|+.|+++.+.+.+|.+.++...+. .+.+.....+
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~ 310 (347)
T d1z45a2 237 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR------RAGDVLNLTA 310 (347)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------CCCCCB
T ss_pred eeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCC------CCCCCCEeeE
Confidence 5666777788888777531 3579999999999999999999999998876543322 1233445678
Q ss_pred ChhHHHhhcC--CccChHHHHHHHHhccC
Q 005949 639 DASKLKKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 639 d~~k~~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
|++|+++.+| +..+++++|+++++|+.
T Consensus 311 d~sk~~~~lGw~p~~~lee~i~~ti~w~~ 339 (347)
T d1z45a2 311 KPDRAKRELKWQTELQVEDSCKDLWKWTT 339 (347)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 9999999888 45799999999999875
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-35 Score=297.36 Aligned_cols=269 Identities=15% Similarity=0.133 Sum_probs=212.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------------cccccccCChhHHHHHhhhcC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------------EYGKGRLEDCSSLIADVQSVK 431 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------------~~~~~D~~d~~~~~~~l~~~~ 431 (668)
.+||||||||||||++|+++|+++||+| .++.+|++|.+.+.+.+.+.+
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence 3589999999999999999999999965 345689999999999999998
Q ss_pred CCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
+++|+|+||.. ++..+..+|...+++|+.||.+++++|+++++ ++++.||+.+|+.....+ ..++.....
T Consensus 82 ~~~i~h~Aa~~---~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~------~~~~~~~~~ 152 (346)
T d1ek6a_ 82 FMAVIHFAGLK---AVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLP------LDEAHPTGG 152 (346)
T ss_dssp EEEEEECCSCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSS------BCTTSCCCC
T ss_pred ccccccccccc---CcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccc------ccccccccc
Confidence 99999999988 67778889999999999999999999999998 577778888887655433 233334456
Q ss_pred CCCcchhhHHHHHHHHHhccC-eeEeEEeeeecCCCCChh--------------hHHHH----hhcccc-eeec------
Q 005949 511 TGSFYSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPR--------------NFITK----ISRYNK-VVNI------ 564 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~-~~~l~~~~~r~~~~~g~~--------------~~~~~----~~~~~~-~~~~------ 564 (668)
+.++|+.+|..+|+.+..+.+ ..+++.+++|++++|||+ .++.. +..... ....
T Consensus 153 ~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~ 232 (346)
T d1ek6a_ 153 CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT 232 (346)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred cCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccC
Confidence 678999999999999998754 358999999999999974 12322 222221 1111
Q ss_pred C-----CCcccHhhHHHHHHHHHhcc----CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCC
Q 005949 565 P-----NSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSN 635 (668)
Q Consensus 565 ~-----~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 635 (668)
+ .+|+|++|+|.++..++... .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .+.+...
T Consensus 233 ~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~------~~~e~~~ 306 (346)
T d1ek6a_ 233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR------REGDVAA 306 (346)
T ss_dssp SSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC------CTTCCSE
T ss_pred CCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCC------CCCCCCE
Confidence 1 27999999999998876532 4569999999999999999999999998876543322 1223344
Q ss_pred CccChhHHHhhcC--CccChHHHHHHHHhccCC
Q 005949 636 NEMDASKLKKEFP--ELLSIKDSLIKYVFEPNK 666 (668)
Q Consensus 636 ~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~~~ 666 (668)
..+|++|+++.+| +..+++|+|+++++|+++
T Consensus 307 ~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~ 339 (346)
T d1ek6a_ 307 CYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339 (346)
T ss_dssp ECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred eeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHh
Confidence 5689999999878 457899999999999864
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-34 Score=292.21 Aligned_cols=274 Identities=15% Similarity=0.115 Sum_probs=213.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc----ccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccccccccccee
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG----KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIR 459 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~----~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~ 459 (668)
+||||||||||||++|+++|+++|+.+.++ ..|+++.+.+.+.++..++|.|+|+|+..+ .......++.++++
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~--~~~~~~~~~~~~~~ 80 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVG--GIVANNTYPADFIY 80 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCC--CHHHHHHCHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEcchhcc--ccccchhhHHHHHH
Confidence 689999999999999999999999976443 567889999999999989999999998662 22334566777889
Q ss_pred hhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEe
Q 005949 460 TNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR 538 (668)
Q Consensus 460 ~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~ 538 (668)
+|+.||.+|+++|++.++ ++||+||++||+.....|.. +....+..+.++.++||.||.++|++++.|.+..+++++
T Consensus 81 ~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~--E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ 158 (315)
T d1e6ua_ 81 QNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA--ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYR 158 (315)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBC--GGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCcc--CCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 999999999999999998 68899999999876655411 111223345556678999999999999999888899999
Q ss_pred eeecCCCCChhh--------H---------HHHhhcccceeecC-----CCcccHhhHHHHHHHHHhcc----------C
Q 005949 539 MPISSDLNNPRN--------F---------ITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRN----------L 586 (668)
Q Consensus 539 ~~r~~~~~g~~~--------~---------~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~----------~ 586 (668)
++|++++|||++ + ......+......+ .+++|++|+++++..+++.. .
T Consensus 159 ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~ 238 (315)
T d1e6ua_ 159 SVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPM 238 (315)
T ss_dssp EEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTT
T ss_pred EEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhcccccccccccc
Confidence 999999999851 1 11222233333322 28899999999999998542 4
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhccC
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~ 665 (668)
.+.+|++++...++.++++.+.+.+|.+..+...+ ..+.......+|++|++++++ +..+++++|+++++|+.
T Consensus 239 ~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~------~~~~~~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~ 312 (315)
T d1e6ua_ 239 LSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA------SKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFL 312 (315)
T ss_dssp BCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEET------TSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHH
T ss_pred ccccccCCCcchHHHHHHHHHHHHhCCCcceEECC------CCCCCCceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999886543222 112333445789999987544 56799999999999986
Q ss_pred CC
Q 005949 666 KK 667 (668)
Q Consensus 666 ~~ 667 (668)
++
T Consensus 313 ~N 314 (315)
T d1e6ua_ 313 EN 314 (315)
T ss_dssp HT
T ss_pred Hc
Confidence 43
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=1.4e-34 Score=299.34 Aligned_cols=273 Identities=11% Similarity=0.090 Sum_probs=209.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHH-cCCccc-----------------------------------------ccccccCChh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEK-EGIPFE-----------------------------------------YGKGRLEDCS 421 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~-~g~~v~-----------------------------------------~~~~D~~d~~ 421 (668)
||||||||+||||++|+++|++ .||+|. ++.+|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 6999999999999999999986 566543 4568999999
Q ss_pred HHHHHhhhcC-CCEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCC
Q 005949 422 SLIADVQSVK-PTHVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSG 499 (668)
Q Consensus 422 ~~~~~l~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~ 499 (668)
.+.++++..+ +|+|||+|+.. .......++...++.|+.++.+++++|++.++ ++++.||+++|+.....+....
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~---~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 159 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFL---AVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN 159 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred Hhhhhhhccceeehhhcccccc---cccccccccccccccccccccccchhhhccCCccccccccccccccccccccccc
Confidence 9999998875 49999999987 56666778888899999999999999999998 4556677777765544332222
Q ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-----------------HHHHhhcc----
Q 005949 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----------------FITKISRY---- 558 (668)
Q Consensus 500 ~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----------------~~~~~~~~---- 558 (668)
.....|+.+..|.+.|+.+|..+|++++.|.+.++++++++|++++|||+. ++.+++..
T Consensus 160 ~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 333556677788899999999999999999888999999999999999862 11222211
Q ss_pred ------------cceeecC-----------CCcccHhhHHHHHHHHHhc----------cCCceeeecCCCccCHHHHHH
Q 005949 559 ------------NKVVNIP-----------NSMTVLDELLPISIEMAKR----------NLRGIWNFTNPGVVSHNEILE 605 (668)
Q Consensus 559 ------------~~~~~~~-----------~~~~~v~D~a~~~~~~~~~----------~~~g~~ni~~~~~~s~~e~~~ 605 (668)
.+....+ .+|+|++|+|++++.+++. ...++||+++++++|+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~ 319 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHH
Confidence 1111111 2799999999999999863 135699999999999999999
Q ss_pred HHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHH-hccC
Q 005949 606 MYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYV-FEPN 665 (668)
Q Consensus 606 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~-~~~~ 665 (668)
.+.+.+|.+.++...+. .+.+.....+|++|+++.+| +..+++++|+++. .|+.
T Consensus 320 ~i~~~~~~~~~~~~~~~------~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~ 376 (383)
T d1gy8a_ 320 VARKTTGHPIPVRECGR------REGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQR 376 (383)
T ss_dssp HHHHHHCCCCCEEEECC------CTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCceEECCC------CCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHH
Confidence 99999998866433221 12233455779999999887 4579999999985 5543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=100.00 E-value=1.5e-33 Score=281.58 Aligned_cols=273 Identities=18% Similarity=0.200 Sum_probs=206.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------ccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------YGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDT 457 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 457 (668)
|||||||||||||++|+++|.++|+.+. .+.+|++|.+.+++.+++.+||+||||||.+ .+..++.++...
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~---~~~~~~~~~~~~ 77 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT---AVDKAESEPELA 77 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC---CHHHHTTCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEecccc---cccccccCcccc
Confidence 7999999999999999999999997552 3457999999999999999999999999988 677888999999
Q ss_pred eehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhccCe-eEeE
Q 005949 458 IRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNV-CTLR 536 (668)
Q Consensus 458 ~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~l~ 536 (668)
++.|+.++.+|+++|++.+++++++||+.+|+.....| .+|+.+..|.+.|+.+|..+|+.+..+... ..++
T Consensus 78 ~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~-------~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~ 150 (298)
T d1n2sa_ 78 QLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIP-------WQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFR 150 (298)
T ss_dssp HHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCC-------BCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred ccccccccccchhhhhccccccccccccccccCCCCCC-------CccccccCCCchHhhhhhhhhhhHHhhhccccccc
Confidence 99999999999999999999999999999998776665 556666678899999999999999886443 2333
Q ss_pred EeeeecCCCCChh--hHHHH-hhcccceeec---CCCcccHhhHHHHHHHHHhc-----cCCceeeecCCCccCHHHHHH
Q 005949 537 VRMPISSDLNNPR--NFITK-ISRYNKVVNI---PNSMTVLDELLPISIEMAKR-----NLRGIWNFTNPGVVSHNEILE 605 (668)
Q Consensus 537 ~~~~r~~~~~g~~--~~~~~-~~~~~~~~~~---~~~~~~v~D~a~~~~~~~~~-----~~~g~~ni~~~~~~s~~e~~~ 605 (668)
...... .+|+. .++.+ +......... ..+++|++|+++++..++.. ...++||+++++.++..++++
T Consensus 151 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 228 (298)
T d1n2sa_ 151 TSWVYA--GKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAA 228 (298)
T ss_dssp ECSEEC--SSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHH
T ss_pred ccceee--ccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHHH
Confidence 333222 22332 23333 3333332222 23789999999999888753 367899999999999999999
Q ss_pred HHHhhcCCCCCCCCCCH----HHhhhhhccCCC-CCccChhHHHhhcC-CccChHHHHHHHHhccCCCC
Q 005949 606 MYKKYINPEFKWVNFTL----EEQAKVIVAPRS-NNEMDASKLKKEFP-ELLSIKDSLIKYVFEPNKKT 668 (668)
Q Consensus 606 ~i~~~~g~~~~~~~~~~----~~~~~~~~~~~~-~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~~~~~ 668 (668)
.+.+..+........+. .......+..|| +..+|++|+++.+| ++++|++||+++++++...|
T Consensus 229 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~~~~~gl~~~i~~~~~~~ 297 (298)
T d1n2sa_ 229 LVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTT 297 (298)
T ss_dssp HHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCCBHHHHHHHHHHHHHSCC
T ss_pred HHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCCcHHHHHHHHHHHHHhhc
Confidence 98776543221111110 000001123333 45789999999888 77899999999999997654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2e-33 Score=286.06 Aligned_cols=268 Identities=21% Similarity=0.154 Sum_probs=207.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------------------------ccccccCChhHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------------YGKGRLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------------------------~~~~D~~d~~~~~~~l~~~~~d 433 (668)
+++||||||||||++|+++|+++||+|. ++.+|+++.+.+.+.++..++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 5899999999999999999999999763 3347899999999999999999
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC-----C-cEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG-----I-LMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~-----~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+|+.. .......+|...++.|+.++.+++++|++.. . ++++.||+.+|+.. .. ...|+.
T Consensus 82 ~Vih~Aa~~---~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~-------~~~E~~ 150 (339)
T d1n7ha_ 82 EVYNLAAQS---HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PP-------PQSETT 150 (339)
T ss_dssp EEEECCSCC---CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CS-------SBCTTS
T ss_pred hhhhccccc---cccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CC-------CCCCCC
Confidence 999999987 5556678899999999999999999998643 2 34444555554332 22 256777
Q ss_pred CCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---h-----H---HHHhhccc-ceeecCC-----Cccc
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR---N-----F---ITKISRYN-KVVNIPN-----SMTV 570 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~---~-----~---~~~~~~~~-~~~~~~~-----~~~~ 570 (668)
|..|.+.||.+|..+|+++..|.+.++++++++|++++|||+ . + +.....+. .....++ +|+|
T Consensus 151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~ 230 (339)
T d1n7ha_ 151 PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 230 (339)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence 888999999999999999999988889999999999999995 1 1 11222222 2222222 7999
Q ss_pred HhhHHHHHHHHHhccCCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--
Q 005949 571 LDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-- 648 (668)
Q Consensus 571 v~D~a~~~~~~~~~~~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-- 648 (668)
++|+|+++..+++++..+.++++.+...+..++++.+.+.+|.......... .....+.......+|++|+++.+|
T Consensus 231 v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~r~~~~~~~~~d~~Kak~~LGw~ 308 (339)
T d1n7ha_ 231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEID--QRYFRPAEVDNLQGDASKAKEVLGWK 308 (339)
T ss_dssp HHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEEC--GGGSCSSCCCBCCBCCHHHHHHHCCC
T ss_pred eehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeec--cCCCCCCCCCeeeECHHHHHHHHCCC
Confidence 9999999999999988888999999999999999999999997653211100 011112223344679999999877
Q ss_pred CccChHHHHHHHHhcc
Q 005949 649 ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 649 ~~~~~~~~l~~~~~~~ 664 (668)
+..+|+++|+++++|+
T Consensus 309 P~~~le~gi~~ti~~~ 324 (339)
T d1n7ha_ 309 PQVGFEKLVKMMVDED 324 (339)
T ss_dssp CCSCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH
Confidence 4479999999999876
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.8e-33 Score=292.19 Aligned_cols=273 Identities=13% Similarity=0.038 Sum_probs=200.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-----------------------------------------ccccccCChhH
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-----------------------------------------YGKGRLEDCSS 422 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-----------------------------------------~~~~D~~d~~~ 422 (668)
|||||||||||||++|+++|+++||+|. ++.+|++|.+.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence 7999999999999999999999998763 45689999999
Q ss_pred HHHHhhhcCCCEEEEcccccCCCCcccccc---ccccceehhhhhhHHHHHHHHHcCC-cEEEEecc-eeEeecCCCCCC
Q 005949 423 LIADVQSVKPTHVFNAAGVTGRPNVDWCES---HKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATG-CIFEYDAAHPEG 497 (668)
Q Consensus 423 ~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~---~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~-~vy~~~~~~p~~ 497 (668)
+.+++++++||+|||+||.. .+..+.. .+..++++|+.||.+++++|++.++ ++++++|+ .+|+... .+..
T Consensus 82 l~~~~~~~~~d~ViHlAa~~---~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~ 157 (393)
T d1i24a_ 82 LAESFKSFEPDSVVHFGEQR---SAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIE 157 (393)
T ss_dssp HHHHHHHHCCSEEEECCSCC---CHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBC
T ss_pred HHHHHHhhcchheecccccc---ccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccc-cccc
Confidence 99999999999999999977 4444433 3556788999999999999999987 44555555 4554332 2200
Q ss_pred CCCCCC-------CCCCCCCCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh---------------------
Q 005949 498 SGIGYK-------EEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR--------------------- 549 (668)
Q Consensus 498 ~~~~~~-------ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~--------------------- 549 (668)
...... ++..+..|.+.|+.||+++|.+++.|.+.++++++++|++++|||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 158 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred cccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccc
Confidence 000001 1224567778999999999999999988899999999999999984
Q ss_pred ----hHHHHhhcccceeecCC-----CcccHhhHHHHHHHHHhcc-CCceeee--cCCCccCHHHHHHHHHhhc---CCC
Q 005949 550 ----NFITKISRYNKVVNIPN-----SMTVLDELLPISIEMAKRN-LRGIWNF--TNPGVVSHNEILEMYKKYI---NPE 614 (668)
Q Consensus 550 ----~~~~~~~~~~~~~~~~~-----~~~~v~D~a~~~~~~~~~~-~~g~~ni--~~~~~~s~~e~~~~i~~~~---g~~ 614 (668)
.++.++..+.+....++ +|+|++|+|++++.++++. ..|.||+ ++++.+|+.|+++.+.+.. +.+
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~ 317 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD 317 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred cchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCC
Confidence 24444555555444332 7999999999999999875 6666655 4557899999999998874 333
Q ss_pred CCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-CccChHHHHHHHHhcc
Q 005949 615 FKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP-ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g-~~~~~~~~l~~~~~~~ 664 (668)
+.....+.+ ...........|++|++++++ +..++++++++++++.
T Consensus 318 ~~~~~~~~~----~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~ 364 (393)
T d1i24a_ 318 VKKMTVPNP----RVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFA 364 (393)
T ss_dssp CCEEEECCS----SCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred cceeeccCC----CCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHH
Confidence 332211110 112222344679999998655 5678888998888764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=1.7e-31 Score=267.70 Aligned_cols=294 Identities=21% Similarity=0.235 Sum_probs=200.9
Q ss_pred EEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHH-HHHhc---cCCCCEE
Q 005949 9 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLV-NFLLI---TESIDTI 84 (668)
Q Consensus 9 vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~-~~~~~---~~~~d~V 84 (668)
|||||||||||++|++.|+++| -++|+++|+.........+. .....|..+.+.+ ..... ...+++|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g-~~~V~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTKFVNLV--------DLNIADYMDKEDFLIQIMAGEEFGDVEAI 72 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCSSGGGGHHHH--------TSCCSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EEEecCccHHHHHHHHHHHhCC-CCeEEEEECCCCcchhhccc--------ccchhhhccchHHHHHHhhhhcccchhhh
Confidence 8999999999999999999994 24788887643322111111 0112222223322 22221 2468899
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHH
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKA 164 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 164 (668)
+|+|+..... ..+.......|+.++.+++++++..+ + ++|++||..+|+....... .++....|.+.|+.+|.
T Consensus 73 ~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~~~~---~~~~~~~~~~~Y~~~K~ 145 (307)
T d1eq2a_ 73 FHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFI---ESREYEKPLNVYGYSKF 145 (307)
T ss_dssp EECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBC---SSGGGCCCSSHHHHHHH
T ss_pred hhhccccccc--cccccccccccccccccccccccccc-c-ccccccccccccccccccc---ccccccccccccccccc
Confidence 9999875533 34666788899999999999999976 4 5777777777766554332 45556678899999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCcee-ecCCCceEeceeHHHHHHHHHHHH
Q 005949 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPI-HGDGSNVRSYLYCEDVAEAFECIL 239 (668)
Q Consensus 165 ~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~ai~~~~ 239 (668)
.+|.+++.+.++++++++++||+++|||+... ...+..+.+.+..++...+ .+++...|+|+|++|++.++..++
T Consensus 146 ~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~ 225 (307)
T d1eq2a_ 146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 225 (307)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred hhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHh
Confidence 99999999999999999999999999997643 2456677777777765544 577888999999999999999999
Q ss_pred hcCCCCceEEEcCCCcccHHHHHHHHHHHhCCCCCcceEeccCC-CCCCcccccChHHHHh-CCCcccCCHHHHHHHHHH
Q 005949 240 HKGEVGHVYNVGTKKERRVIDVAKDICKLFSMDPETSIKFVENR-PFNDQRYFLDDQKLTS-LGWSERTIWEEGLRKTIE 317 (668)
Q Consensus 240 ~~~~~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~k~~~-lG~~~~~~~~~~l~~~~~ 317 (668)
+++. .+.||++++...|+.|+++.+.+..+......+...... .........|++|+++ +||+|+++++|+|+++++
T Consensus 226 ~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~ 304 (307)
T d1eq2a_ 226 ENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMA 304 (307)
T ss_dssp HHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHH
T ss_pred hhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence 8764 469999999999999999999877653211111111111 1112234568999985 899999999999999999
Q ss_pred HH
Q 005949 318 WY 319 (668)
Q Consensus 318 ~~ 319 (668)
|+
T Consensus 305 w~ 306 (307)
T d1eq2a_ 305 WL 306 (307)
T ss_dssp HT
T ss_pred hC
Confidence 96
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.97 E-value=4.1e-32 Score=276.30 Aligned_cols=272 Identities=17% Similarity=0.211 Sum_probs=208.5
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccc------------------------ccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFE------------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
||||||||||||++|+++|+++||+|. ++.+|++|.+.+.+++++++||+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 899999999999999999999998653 45689999999999999999999999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCC-CCC---------CCCCCCCCCCCC
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAH-PEG---------SGIGYKEEDTPN 509 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~-p~~---------~~~~~~ee~~~~ 509 (668)
.. .......++...+++|+.||.||+++|.+.++ +++++||+.++++.... +.. .......+..+.
T Consensus 82 ~~---~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 82 QV---AMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CC---CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cc---cccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 88 56666778899999999999999999999998 67777777655543322 100 000112233455
Q ss_pred CCCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChh-----------hHHHHhhc-----ccceeecCC-----Cc
Q 005949 510 FTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPR-----------NFITKISR-----YNKVVNIPN-----SM 568 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~-----------~~~~~~~~-----~~~~~~~~~-----~~ 568 (668)
.|.+.|+.+|..+|.++..+.+.+++....++++++|++. .++..+++ +++....++ +|
T Consensus 159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 6778999999999999998877778888888888887654 34444432 223333322 79
Q ss_pred ccHhhHHHHHHHHHhcc---CCceeeecC--CCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHH
Q 005949 569 TVLDELLPISIEMAKRN---LRGIWNFTN--PGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKL 643 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~---~~g~~ni~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~ 643 (668)
+|++|+|++++.++++. .+++||+.. +..+++.|+++.+.+.++.+.++...+. .+.+.....+|++|+
T Consensus 239 ~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~d~~k~ 312 (338)
T d1orra_ 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV------RESDQRVFVADIKKI 312 (338)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC------CSSCCSEECBCCHHH
T ss_pred ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCC------CCCCcCeeeECHHHH
Confidence 99999999999999763 567899854 5678999999999999998766544332 122333456799999
Q ss_pred HhhcC--CccChHHHHHHHHhccC
Q 005949 644 KKEFP--ELLSIKDSLIKYVFEPN 665 (668)
Q Consensus 644 ~~~~g--~~~~~~~~l~~~~~~~~ 665 (668)
++.+| +..+++++|+++++|++
T Consensus 313 ~~~Lg~~p~~sl~e~i~~ti~W~k 336 (338)
T d1orra_ 313 TNAIDWSPKVSAKDGVQKMYDWTS 336 (338)
T ss_dssp HHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred HHHHCCCcCCCHHHHHHHHHHHHH
Confidence 99877 44699999999999874
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.97 E-value=4.4e-30 Score=256.18 Aligned_cols=282 Identities=20% Similarity=0.175 Sum_probs=216.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|||||||||||||++|++.|.++ ++ ++.+++... .+.+|+.|.+.+.++++..++|+|||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g~-~v~~~~~~~-----------------~~~~Dl~~~~~~~~~i~~~~~D~Vih 60 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--GN-LIALDVHSK-----------------EFCGDFSNPKGVAETVRKLRPDVIVN 60 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--SE-EEEECTTCS-----------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CC-EEEEECCCc-----------------cccCcCCCHHHHHHHHHHcCCCEEEE
Confidence 68999999999999999999987 33 445554321 12579999999999997778999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHH
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 166 (668)
+||......++.++...+..|+.++.+|+++|++.+ .+++++||+.+|+.....+ .+|+.+..|.+.|+.+|..+
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~~~~~---~~E~~~~~p~~~y~~~k~~~ 135 (298)
T d1n2sa_ 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGTGDIP---WQETDATSPLNVYGKTKLAG 135 (298)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCCTTCC---BCTTSCCCCSSHHHHHHHHH
T ss_pred ecccccccccccCccccccccccccccchhhhhccc--cccccccccccccCCCCCC---CccccccCCCchHhhhhhhh
Confidence 999988777888999999999999999999999866 6899999999998766544 37888888999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHh----cC
Q 005949 167 EMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILH----KG 242 (668)
Q Consensus 167 E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~----~~ 242 (668)
|.+++.+. ....++|++..++..+ ......+.+.+..+..+.+.+ .+.++++|+.|+++++..+++ .+
T Consensus 136 e~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~~~~~~~ 207 (298)
T d1n2sa_ 136 EKALQDNC----PKHLIFRTSWVYAGKG--NNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKP 207 (298)
T ss_dssp HHHHHHHC----SSEEEEEECSEECSSS--CCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred hhhHHhhh----cccccccccceeeccC--Cccchhhhhhhcccceeeccc--ceeecccccchHHHHHHHHHhhhhccc
Confidence 99987654 3456777776665433 245556666666666655543 478899999999999887765 34
Q ss_pred CCCceEEEcCCCcccHHHHHHHHHHHhCC---CCCc-ceEeccCCCCC-----CcccccChHHHHh-CCCcccCCHHHHH
Q 005949 243 EVGHVYNVGTKKERRVIDVAKDICKLFSM---DPET-SIKFVENRPFN-----DQRYFLDDQKLTS-LGWSERTIWEEGL 312 (668)
Q Consensus 243 ~~~~~~ni~~~~~~s~~el~~~i~~~~g~---~~~~-~~~~~~~~~~~-----~~~~~~~~~k~~~-lG~~~~~~~~~~l 312 (668)
...++||++++..++..++++.+.+..+. .... .+...+...+. +....+|++|+++ +||+|+ +|+++|
T Consensus 208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl 286 (298)
T d1n2sa_ 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV 286 (298)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred cccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHHHH
Confidence 46789999999999999999988776532 2211 11111111111 1234689999975 999998 899999
Q ss_pred HHHHHHHhhC
Q 005949 313 RKTIEWYTQN 322 (668)
Q Consensus 313 ~~~~~~~~~~ 322 (668)
+++++++...
T Consensus 287 ~~~i~~~~~~ 296 (298)
T d1n2sa_ 287 KRMLTEMFTT 296 (298)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHhh
Confidence 9999988764
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=6.5e-30 Score=256.08 Aligned_cols=265 Identities=12% Similarity=0.147 Sum_probs=189.9
Q ss_pred EEEEcCCcchhHHHHHHHHHcCC-ccccc-------------ccccC---ChhHH-HHHhhh---cCCCEEEEcccccCC
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGI-PFEYG-------------KGRLE---DCSSL-IADVQS---VKPTHVFNAAGVTGR 444 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~-~v~~~-------------~~D~~---d~~~~-~~~l~~---~~~d~Vih~a~~~~~ 444 (668)
|||||||||||++|+++|+++|+ +|..+ ..++. +.+.+ ...+.. ..+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~-- 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS-- 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC--
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc--
Confidence 89999999999999999999996 45432 11222 22232 222221 1468999999855
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEE 524 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~ 524 (668)
.....+.......|+.++.+++++|+..++++++.||+.+|++....+ .+++.+..|.+.|+.+|..+|.
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~-------~~~~~~~~~~~~Y~~~K~~~e~ 149 (307)
T d1eq2a_ 80 ---STTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDF-------IESREYEKPLNVYGYSKFLFDE 149 (307)
T ss_dssp ---CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCB-------CSSGGGCCCSSHHHHHHHHHHH
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccccccccchhhh
Confidence 223445566778999999999999999999999999999987765443 5556666778999999999999
Q ss_pred HHHhccCeeEeEEeeeecCCCCChh------------hHHHHhhcccceeec------CCCcccHhhHHHHHHHHHhccC
Q 005949 525 LLKEYDNVCTLRVRMPISSDLNNPR------------NFITKISRYNKVVNI------PNSMTVLDELLPISIEMAKRNL 586 (668)
Q Consensus 525 ~~~~~~~~~~l~~~~~r~~~~~g~~------------~~~~~~~~~~~~~~~------~~~~~~v~D~a~~~~~~~~~~~ 586 (668)
++..|.+.++++++++|++++|||+ .+..++..++..... ..+|+|++|+++++..++++..
T Consensus 150 ~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~ 229 (307)
T d1eq2a_ 150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229 (307)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred hccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc
Confidence 9999988899999999999999995 233444444433322 2289999999999999999888
Q ss_pred CceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC--CccChHHHHHHHHhcc
Q 005949 587 RGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP--ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 587 ~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g--~~~~~~~~l~~~~~~~ 664 (668)
.+.||+++++..|+.|+++.+.+..+. ..+...+.++. ...........|++|+++.+| +..+++|||+++++|+
T Consensus 230 ~~~~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~--~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 230 SGIFNLGTGRAESFQAVADATLAYHKK-GQIEYIPFPDK--LKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp CEEEEESCSCCBCHHHHHHHC------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred ccccccccccchhHHHHHHHHHHhcCC-CCeeEeeCCcc--CCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 899999999999999999999887653 22222222211 112223344669999999988 4689999999999987
Q ss_pred C
Q 005949 665 N 665 (668)
Q Consensus 665 ~ 665 (668)
+
T Consensus 307 ~ 307 (307)
T d1eq2a_ 307 N 307 (307)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.96 E-value=1.6e-29 Score=258.80 Aligned_cols=268 Identities=19% Similarity=0.153 Sum_probs=201.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
+||||||||||||++|+++|+++|++| .++.+|++|++.+.++++.+.||+|+|+|+
T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa 88 (356)
T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA 88 (356)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhhc
Confidence 699999999999999999999999965 345579999999999999999999999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhH
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTK 519 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK 519 (668)
.. ....+..+|..++++|+.|+.+++++|++.+. ++++++|+.+++..... ....+++.+..|.++|+.+|
T Consensus 89 ~~---~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 89 QP---LVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-----IWGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp CC---CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-----SSCBCTTSCBCCSSHHHHHH
T ss_pred cc---cccccccCCccccccccccchhhhhhhhcccccccccccccccccccccc-----ccccccccccCCCCcccccc
Confidence 87 56667788999999999999999999999875 55555555444333221 11356677777889999999
Q ss_pred HHHHHHHHhccC---------eeEeEEeeeecCCCCChhh-----HHH----Hhhcccceeec----CCCcccHhhHHHH
Q 005949 520 AMVEELLKEYDN---------VCTLRVRMPISSDLNNPRN-----FIT----KISRYNKVVNI----PNSMTVLDELLPI 577 (668)
Q Consensus 520 ~~~E~~~~~~~~---------~~~l~~~~~r~~~~~g~~~-----~~~----~~~~~~~~~~~----~~~~~~v~D~a~~ 577 (668)
..+|..+..+.. ..++.++++|++++|||.+ ++. .+..+...... ..+++|++|+|.+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a 240 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSG 240 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHH
T ss_pred ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccch
Confidence 999998876532 3568899999999999973 333 33333332221 1278999999999
Q ss_pred HHHHHhcc--C----Cc--eeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHHHhhhhhccCCCCCccChhHHHhhcC-
Q 005949 578 SIEMAKRN--L----RG--IWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFP- 648 (668)
Q Consensus 578 ~~~~~~~~--~----~g--~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ld~~k~~~~~g- 648 (668)
+..++.+. . .+ .++..+...+++.++++.+.+.++.+..+..... ..+.+.....+|++|+++.+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~skak~~LGw 315 (356)
T d1rkxa_ 241 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN-----AHPHEAHYLKLDCSKAKMQLGW 315 (356)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC------------CCCCCCBCCHHHHHHHCC
T ss_pred hhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCC-----CCCCCcCeeeEcHHHHHHHHCC
Confidence 99888763 1 22 3444456788999999999999998765432211 112334455789999999887
Q ss_pred -CccChHHHHHHHHhcc
Q 005949 649 -ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 649 -~~~~~~~~l~~~~~~~ 664 (668)
+..+++++|++++.|+
T Consensus 316 ~P~~~l~egi~~ti~wy 332 (356)
T d1rkxa_ 316 HPRWNLNTTLEYIVGWH 332 (356)
T ss_dssp CCCCCHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHH
Confidence 4578999999999765
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=3e-29 Score=254.49 Aligned_cols=265 Identities=11% Similarity=0.076 Sum_probs=186.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc--------------------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE--------------------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~--------------------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
.+||||||+||||++|+++|+++||+|. .+.+|+.|.+++.+++.++ |+|+|
T Consensus 12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~v~~ 89 (342)
T d1y1pa1 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA--AGVAH 89 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccc--hhhhh
Confidence 5899999999999999999999999762 2457888988888888877 99999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHc-CC-cEEEEecceeEeecCCCCCCCCCCCC------------
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-GI-LMMNYATGCIFEYDAAHPEGSGIGYK------------ 503 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~------------ 503 (668)
+|+.. . ...++..+++.|+.||.+++++|++. ++ ++++.||+.+++...... ...+.
T Consensus 90 ~a~~~---~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~---~~~~~~e~~~~~~~~~~ 160 (342)
T d1y1pa1 90 IASVV---S---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV---EGIYLDEKSWNLESIDK 160 (342)
T ss_dssp CCCCC---S---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC---CCCEECTTCCCHHHHHH
T ss_pred hcccc---c---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCC---CCccccccccccccccc
Confidence 99965 2 23456677889999999999999997 46 455556654433322211 01111
Q ss_pred ----CCCCCCCCCCcchhhHHHHHHHHHhccCe--eEeEEeeeecCCCCChh-----------hHHHHhhccccee----
Q 005949 504 ----EEDTPNFTGSFYSKTKAMVEELLKEYDNV--CTLRVRMPISSDLNNPR-----------NFITKISRYNKVV---- 562 (668)
Q Consensus 504 ----ee~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~l~~~~~r~~~~~g~~-----------~~~~~~~~~~~~~---- 562 (668)
.|..+..|.+.|+.||..+|++++.|.+. .+++++.++|+.++||. .++..++.+....
T Consensus 161 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 240 (342)
T d1y1pa1 161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL 240 (342)
T ss_dssp HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred cccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCC
Confidence 23345556688999999999999988543 34777888888888873 3555666554322
Q ss_pred ecCCCcccHhhHHHHHHHHHhcc-CCceeeecCCCccCHHHHHHHHHhhcCC-CCCCCCCCHHHhhhhhccCCCCCccCh
Q 005949 563 NIPNSMTVLDELLPISIEMAKRN-LRGIWNFTNPGVVSHNEILEMYKKYINP-EFKWVNFTLEEQAKVIVAPRSNNEMDA 640 (668)
Q Consensus 563 ~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ld~ 640 (668)
....+|+|++|+|++++.+++++ ..|.||+++++.+|++|+++.+++.+.. .++ ..++.. ...........+.
T Consensus 241 ~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~-~~~~~~----~~~~~~~~~~~s~ 315 (342)
T d1y1pa1 241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFP-ADFPDQ----GQDLSKFDTAPSL 315 (342)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCC-CCCCCC----CCCCCEECCHHHH
T ss_pred ccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCC-ccCCcc----CcccccccchHHH
Confidence 22347999999999999999875 6888999999999999999999998732 221 111100 0000011122344
Q ss_pred hHHHhhcC-CccChHHHHHHHHhcc
Q 005949 641 SKLKKEFP-ELLSIKDSLIKYVFEP 664 (668)
Q Consensus 641 ~k~~~~~g-~~~~~~~~l~~~~~~~ 664 (668)
.+++.+++ +..+++++|+++++..
T Consensus 316 ~~~k~lg~~~~~~lee~i~d~I~s~ 340 (342)
T d1y1pa1 316 EILKSLGRPGWRSIEESIKDLVGSE 340 (342)
T ss_dssp HHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred HHHHHcCCCCCcCHHHHHHHHHHhC
Confidence 55555444 5688999999998764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=2e-25 Score=212.18 Aligned_cols=211 Identities=14% Similarity=0.046 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|++|+|||||||||||++|++.|++++.-++|++++|...... ......+....+|+.+.+.+..++ .++|+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~------~~~~~~i~~~~~D~~~~~~~~~~~--~~~d~ 83 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD------EEAYKNVNQEVVDFEKLDDYASAF--QGHDV 83 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC------SGGGGGCEEEECCGGGGGGGGGGG--SSCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc------ccccceeeeeeecccccccccccc--ccccc
Confidence 5678999999999999999999999975568999998643211 112346788889999999888888 78999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||++|.... ..+...+.+.|+.++.+++++|.+.+ +++||++||..+++.. .+.|+.+|
T Consensus 84 vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~~----------------~~~Y~~~K 143 (232)
T d2bkaa1 84 GFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSS----------------NFLYLQVK 143 (232)
T ss_dssp EEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC----------------SSHHHHHH
T ss_pred cccccccccc---ccchhhhhhhcccccceeeecccccC-ccccccCCccccccCc----------------cchhHHHH
Confidence 9999986432 23456788999999999999999977 9999999998875443 35799999
Q ss_pred HHHHHHHHHHHHhcCCC-EEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 164 AGAEMLVMAYGRSYGLP-VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
..+|+.+++. +++ ++|+||+.+||++... +....+........+ ........|+++|+|++++.++..+
T Consensus 144 ~~~E~~l~~~----~~~~~~IlRP~~i~G~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~I~~~dvA~a~i~~~~~~ 213 (232)
T d2bkaa1 144 GEVEAKVEEL----KFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAMLNNVVRP 213 (232)
T ss_dssp HHHHHHHHTT----CCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCC-----TTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred HHhhhccccc----cccceEEecCceeecCCCcC-cHHHHHHHHHhhccC-----CcccCCCeEEHHHHHHHHHHHHhcC
Confidence 9999988643 564 8999999999997642 344444444444322 2223345799999999999998888
Q ss_pred CCCceEEEcC
Q 005949 243 EVGHVYNVGT 252 (668)
Q Consensus 243 ~~~~~~ni~~ 252 (668)
..++.+.+.+
T Consensus 214 ~~~~~~i~~~ 223 (232)
T d2bkaa1 214 RDKQMELLEN 223 (232)
T ss_dssp CCSSEEEEEH
T ss_pred ccCCeEEEcH
Confidence 7777777653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5.6e-24 Score=198.04 Aligned_cols=201 Identities=15% Similarity=0.143 Sum_probs=156.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|.||||+||||||+||++++++|+++ +++|+++.|.... +. .....+++++.+|+.|.+++.+++ .++|+
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~--~~----~~~~~~~~~~~gD~~d~~~l~~al--~~~d~ 70 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSR--LP----SEGPRPAHVVVGDVLQAADVDKTV--AGQDA 70 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGG--SC----SSSCCCSEEEESCTTSHHHHHHHH--TTCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhh--cc----cccccccccccccccchhhHHHHh--cCCCE
Confidence 56789999999999999999999999 6889988886422 11 122457899999999999999999 78999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
|||++|...... ....+..++.++++++++++ ++|||++||..+|++....+ .....|...|
T Consensus 71 vi~~~g~~~~~~-------~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~----------~~~~~~~~~~ 132 (205)
T d1hdoa_ 71 VIVLLGTRNDLS-------PTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVP----------PRLQAVTDDH 132 (205)
T ss_dssp EEECCCCTTCCS-------CCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSC----------GGGHHHHHHH
T ss_pred EEEEeccCCchh-------hhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCcccc----------ccccccchHH
Confidence 999998643211 11356789999999999988 99999999999887654322 1133588889
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
..+|++++ +.+++++++||+.+++.... ....+..++.....+++++|+|++++.+++++.
T Consensus 133 ~~~e~~l~----~~~~~~tiirp~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~ 193 (205)
T d1hdoa_ 133 IRMHKVLR----ESGLKYVAVMPPHIGDQPLT---------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE 193 (205)
T ss_dssp HHHHHHHH----HTCSEEEEECCSEEECCCCC---------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred HHHHHHHH----hcCCceEEEecceecCCCCc---------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence 99998775 34899999999999864321 223445566677789999999999999998876
Q ss_pred -CCceEEEc
Q 005949 244 -VGHVYNVG 251 (668)
Q Consensus 244 -~~~~~ni~ 251 (668)
.++.+.++
T Consensus 194 ~~g~~~~~s 202 (205)
T d1hdoa_ 194 YDGHSTYPS 202 (205)
T ss_dssp TTTCEEEEE
T ss_pred CCCEEEecC
Confidence 56766665
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.90 E-value=1.6e-24 Score=216.90 Aligned_cols=239 Identities=16% Similarity=0.106 Sum_probs=175.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcccc--CCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL--IPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+++||||||||||||++|+++|+++ |++|++++|.......... .......+++++.+|+.|.+.+.+++ .+++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~--~~~~ 77 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL--KQVD 77 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH--TTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhc--cCcc
Confidence 4678999999999999999999999 6788888885432211110 11122457899999999999999998 7899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHH
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSAT 162 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~s 162 (668)
+++|+++.... ..|..++.++++++++.+ ..++++.||.+++... +..+..|...|..+
T Consensus 78 ~~~~~~~~~~~-----------~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~---------~~~~~~~~~~~~~~ 136 (312)
T d1qyda_ 78 VVISALAGGVL-----------SHHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDI---------MEHALQPGSITFID 136 (312)
T ss_dssp EEEECCCCSSS-----------STTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTS---------CCCCCSSTTHHHHH
T ss_pred hhhhhhhhccc-----------ccchhhhhHHHHHHHHhc-CCcEEEEeeccccCCC---------cccccchhhhhhHH
Confidence 99999986432 234556688888998876 5678888886664433 22334556677777
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 163 K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
|..++.+. ...+++++++|++.+||+.... ....+......++.+.+++++.+.++|+|++|+|++++.+++++
T Consensus 137 ~~~~~~~~----~~~~~~~~i~r~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~ 210 (312)
T d1qyda_ 137 KRKVRRAI----EAASIPYTYVSSNMFAGYFAGS--LAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP 210 (312)
T ss_dssp HHHHHHHH----HHTTCCBCEEECCEEHHHHTTT--SSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHHhh----cccccceEEeccceeecCCccc--hhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc
Confidence 77766654 4458999999999999975421 11111111234556677889999999999999999999999876
Q ss_pred C-CCce-EEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005949 243 E-VGHV-YNVGTKKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 243 ~-~~~~-~ni~~~~~~s~~el~~~i~~~~g~~~~ 274 (668)
. .++. |++++++.+|+.|+++.+.+.+|.+..
T Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
T d1qyda_ 211 QTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLD 244 (312)
T ss_dssp GGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCE
T ss_pred cccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCe
Confidence 5 3454 667767789999999999999998653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.89 E-value=2e-23 Score=208.19 Aligned_cols=233 Identities=17% Similarity=0.134 Sum_probs=168.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcccc---CCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL---IPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
++|||||||||||||+++++.|+++ +++|++++|.......... .......+++++.+|+.+...+.+.+ .++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~ 77 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV--KNV 77 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH--HTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhh--hhc
Confidence 4679999999999999999999999 6788888886432211100 01112346899999999999998888 679
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHH
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSA 161 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~ 161 (668)
+.|+|+++... +.++.++++++...+ ++++++.||...+.... ....+...+..
T Consensus 78 ~~vi~~~~~~~---------------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~----------~~~~~~~~~~~ 131 (307)
T d1qyca_ 78 DVVISTVGSLQ---------------IESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNV----------HAVEPAKSVFE 131 (307)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSC----------CCCTTHHHHHH
T ss_pred eeeeecccccc---------------cchhhHHHHHHHHhc-cccceeeeccccccccc----------ccccccccccc
Confidence 99999987543 234467788888876 77888888754432221 11222334555
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhc
Q 005949 162 TKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHK 241 (668)
Q Consensus 162 sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~ 241 (668)
.+...+.++ .+.+++++++|++++||+... .+..+.....++....+++++.+.++|+|++|+|++++.+++.
T Consensus 132 ~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 204 (307)
T d1qyca_ 132 VKAKVRRAI----EAEGIPYTYVSSNCFAGYFLR---SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD 204 (307)
T ss_dssp HHHHHHHHH----HHHTCCBEEEECCEEHHHHTT---TTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred ccccccchh----hccCCCceecccceecCCCcc---chhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence 555555544 445899999999999998652 1222233334556677788899999999999999999999987
Q ss_pred CC-CCc-eEEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005949 242 GE-VGH-VYNVGTKKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 242 ~~-~~~-~~ni~~~~~~s~~el~~~i~~~~g~~~~ 274 (668)
+. .++ .||+++++.+|+.|+++.+.+.+|.+..
T Consensus 205 ~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~ 239 (307)
T d1qyca_ 205 PRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE 239 (307)
T ss_dssp GGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred hhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence 54 344 5677778899999999999999998754
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.88 E-value=9.1e-23 Score=196.80 Aligned_cols=230 Identities=18% Similarity=0.160 Sum_probs=163.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.|+||||||||||||+++++.|+++|+.+.|+.+.|.... ... ...+++++.+|+.+.+.+.+++ .++|+|
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~--~~~-----~~~~~~~~~~d~~~~~~~~~~~--~~~d~v 72 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEK-----IGGEADVFIGDITDADSINPAF--QGIDAL 72 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHH--HHH-----TTCCTTEEECCTTSHHHHHHHH--TTCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHH--HHh-----ccCCcEEEEeeecccccccccc--ccceee
Confidence 3579999999999999999999999888889888885421 111 1346889999999999999999 789999
Q ss_pred EEcCccCCcc-------------cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 85 MHFAAQTHVD-------------NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 85 ih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
||+|+..... ...........+|+.++.++++.+.... .+.+.+.|+...+.......
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~-------- 143 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLN-------- 143 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGG--------
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccc--------
Confidence 9999864421 1123345677889999999999998876 78899998877654432211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
..+...|...+...+.+ ..+.+++++++||+++|||.......+ .+....+ .....+++|++|+
T Consensus 144 -~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~~~~--------~~~~~~~---~~~~~~~i~~~Dv 207 (252)
T d2q46a1 144 -KLGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVRELL--------VGKDDEL---LQTDTKTVPRADV 207 (252)
T ss_dssp -GGGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSSCEE--------EESTTGG---GGSSCCEEEHHHH
T ss_pred -cccccchhhhhhhhhhh----hhcccccceeecceEEECCCcchhhhh--------hccCccc---ccCCCCeEEHHHH
Confidence 11233455555555443 455689999999999999976322211 1111111 1234579999999
Q ss_pred HHHHHHHHhcCC-CCceEEEcCCC---cccHHHHHHHHHHH
Q 005949 232 AEAFECILHKGE-VGHVYNVGTKK---ERRVIDVAKDICKL 268 (668)
Q Consensus 232 a~ai~~~~~~~~-~~~~~ni~~~~---~~s~~el~~~i~~~ 268 (668)
|++++.+++++. .+++||++++. ..++.|+.+.+.+.
T Consensus 208 a~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i 248 (252)
T d2q46a1 208 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQV 248 (252)
T ss_dssp HHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTC
T ss_pred HHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHH
Confidence 999999998765 56799998643 35677776666543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.88 E-value=1.9e-22 Score=188.93 Aligned_cols=198 Identities=18% Similarity=0.199 Sum_probs=140.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+|||||||||||||++|+++|+++++-.+|+++.|.... ..+.+ ..+..|...+...+ ...+|+||
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~---~~~~~d~~~~~~~~-~~~~d~vi 67 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRL---DNPVGPLAELLPQL-DGSIDTAF 67 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTE---ECCBSCHHHHGGGC-CSCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccc---cccccchhhhhhcc-ccchheee
Confidence 589999999999999999999999766688888775321 11223 44455555444433 24689999
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHH
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAG 165 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 165 (668)
|++|.... ...+...+.+.|+.++.+++++|++.+ +++|+++||.++++.. .+.|+.+|..
T Consensus 68 ~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~~----------------~~~y~~~K~~ 128 (212)
T d2a35a1 68 CCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKS----------------SIFYNRVKGE 128 (212)
T ss_dssp ECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC----------------SSHHHHHHHH
T ss_pred eeeeeecc--ccccccccccchhhhhhhccccccccc-cccccccccccccccc----------------ccchhHHHHH
Confidence 99986532 234556888999999999999999976 9999999998876543 3579999999
Q ss_pred HHHHHHHHHHhcCC-CEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcCCC
Q 005949 166 AEMLVMAYGRSYGL-PVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKGEV 244 (668)
Q Consensus 166 ~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~ 244 (668)
+|+++++ .++ +++|+||+.|||+..... +. .+ .......+. ...+..||++|+|++++.+++++..
T Consensus 129 ~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~-~~-~~----~~~~~~~~~---~~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 129 LEQALQE----QGWPQLTIARPSLLFGPREEFR-LA-EI----LAAPIARIL---PGKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp HHHHHTT----SCCSEEEEEECCSEESTTSCEE-GG-GG----TTCCCC-------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred Hhhhccc----cccccceeeCCcceeCCccccc-HH-HH----HHHHHhhcc---CCCCcEEEHHHHHHHHHHHHcCCCC
Confidence 9998853 355 499999999999976321 11 00 011111111 1234569999999999999987765
Q ss_pred CceEEE
Q 005949 245 GHVYNV 250 (668)
Q Consensus 245 ~~~~ni 250 (668)
+ .+++
T Consensus 196 g-~~~~ 200 (212)
T d2a35a1 196 G-VRFV 200 (212)
T ss_dssp E-EEEE
T ss_pred C-CEEE
Confidence 4 4443
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.85 E-value=2e-21 Score=194.08 Aligned_cols=208 Identities=14% Similarity=0.168 Sum_probs=154.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhcCCCEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~~~d~Vi 436 (668)
++||||||||||||++|+++|+++||+| .++.+|++|.+.+.+.+.+. +++|
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~--~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV--DVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCc--chhh
Confidence 4689999999999999999999999965 34567889999999999887 9999
Q ss_pred EcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 437 NAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 437 h~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
|+++.. ....|..++.+++++|++.+. +++++||..++. ..+..+..+...|
T Consensus 81 ~~~~~~--------------~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~-------------~~~~~~~~~~~~~ 133 (312)
T d1qyda_ 81 SALAGG--------------VLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP-------------DIMEHALQPGSIT 133 (312)
T ss_dssp ECCCCS--------------SSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCT-------------TSCCCCCSSTTHH
T ss_pred hhhhhc--------------ccccchhhhhHHHHHHHHhcCCcEEEEeeccccC-------------CCcccccchhhhh
Confidence 998744 124677888999999998865 777777644331 1222334455677
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-----HHHH-hhcccceeec-----CCCcccHhhHHHHHHHHHhc
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----FITK-ISRYNKVVNI-----PNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----~~~~-~~~~~~~~~~-----~~~~~~v~D~a~~~~~~~~~ 584 (668)
..+|..+|+.... .+++++++|++.+||+.. +... ....+..... ..+++|++|+|++++.++.+
T Consensus 134 ~~~~~~~~~~~~~----~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~ 209 (312)
T d1qyda_ 134 FIDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD 209 (312)
T ss_dssp HHHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHhhcc----cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcC
Confidence 7777777776654 467889999999988741 1111 1122222222 22799999999999999977
Q ss_pred c--CCc-eeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHH
Q 005949 585 N--LRG-IWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLE 623 (668)
Q Consensus 585 ~--~~g-~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 623 (668)
+ .++ .|++++++.+|++|+++.+.+.+|.+.++..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~ 251 (312)
T d1qyda_ 210 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQ 251 (312)
T ss_dssp GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred ccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHH
Confidence 5 344 46777778899999999999999999887776643
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.8e-21 Score=184.55 Aligned_cols=180 Identities=15% Similarity=0.085 Sum_probs=132.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--cc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--PF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
+||+|||||||||++|+++|+++|+ +| ....+|+.+.+++.+.++++ |+|||++|..
T Consensus 15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~--d~vi~~~~~~- 91 (232)
T d2bkaa1 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGH--DVGFCCLGTT- 91 (232)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSC--SEEEECCCCC-
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccc--cccccccccc-
Confidence 5899999999999999999999995 33 23345677777777778876 9999999854
Q ss_pred CCCccccccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHH
Q 005949 444 RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMV 522 (668)
Q Consensus 444 ~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~ 522 (668)
....+...++++|+.++.+++++|.+.+++ ++++||..++. .+.+.|+.+|..+
T Consensus 92 -----~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~--------------------~~~~~Y~~~K~~~ 146 (232)
T d2bkaa1 92 -----RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--------------------SSNFLYLQVKGEV 146 (232)
T ss_dssp -----HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHH
T ss_pred -----ccccchhhhhhhcccccceeeecccccCccccccCCcccccc--------------------CccchhHHHHHHh
Confidence 123455667889999999999999999996 66667655431 1236799999999
Q ss_pred HHHHHhccCeeEeEEeeeecCCCCChhh-------HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc-CCceeeecC
Q 005949 523 EELLKEYDNVCTLRVRMPISSDLNNPRN-------FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN-LRGIWNFTN 594 (668)
Q Consensus 523 E~~~~~~~~~~~l~~~~~r~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~-~~g~~ni~~ 594 (668)
|+.+.++.- -+++++||+.+||++. +...++...........+++++|+|++++.++.++ ..+.+.+.+
T Consensus 147 E~~l~~~~~---~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 147 EAKVEELKF---DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 223 (232)
T ss_dssp HHHHHTTCC---SEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred hhccccccc---cceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence 999988532 1478999999999862 12222222222223346789999999999888776 556666654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.83 E-value=2.9e-21 Score=192.23 Aligned_cols=204 Identities=16% Similarity=0.194 Sum_probs=150.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc---------------------------cccccccCChhHHHHHhhhcCCCEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------------EYGKGRLEDCSSLIADVQSVKPTHV 435 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------------~~~~~D~~d~~~~~~~l~~~~~d~V 435 (668)
++||||||||||||++++++|++.||+| .++.+|+.+...+.+.++.. +.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV--DVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhc--eee
Confidence 3689999999999999999999999965 34456788888888888876 999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
+|+++.. ++.++.++++++...+++.++++|+..+.. ++.....+...+
T Consensus 81 i~~~~~~------------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------------~~~~~~~~~~~~ 129 (307)
T d1qyca_ 81 ISTVGSL------------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------------DNVHAVEPAKSV 129 (307)
T ss_dssp EECCCGG------------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------------TSCCCCTTHHHH
T ss_pred eeccccc------------------ccchhhHHHHHHHHhccccceeeecccccc-------------cccccccccccc
Confidence 9998733 456778899999999886666666543321 122222333456
Q ss_pred hhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhh-----HHHHhhcccceeecC-----CCcccHhhHHHHHHHHHhcc
Q 005949 516 SKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRN-----FITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~-----~~~~~~~~~~~~~~~-----~~~~~v~D~a~~~~~~~~~~ 585 (668)
...+...|..+.. .+++++++|++++||+.. +.....++......+ .+++|++|+|++++.+++++
T Consensus 130 ~~~~~~~~~~~~~----~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 205 (307)
T d1qyca_ 130 FEVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP 205 (307)
T ss_dssp HHHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred ccccccccchhhc----cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence 7777777777655 567889999999998851 222222333222222 28999999999999999865
Q ss_pred --CCc-eeeecCCCccCHHHHHHHHHhhcCCCCCCCCCCHH
Q 005949 586 --LRG-IWNFTNPGVVSHNEILEMYKKYINPEFKWVNFTLE 623 (668)
Q Consensus 586 --~~g-~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 623 (668)
.++ .||+++++.+|+.|+++.+.+.+|.+..+..++..
T Consensus 206 ~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~ 246 (307)
T d1qyca_ 206 RTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEE 246 (307)
T ss_dssp GGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHH
T ss_pred hhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHH
Confidence 334 57778889999999999999999999877766654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.81 E-value=6.4e-20 Score=185.98 Aligned_cols=231 Identities=17% Similarity=0.109 Sum_probs=161.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHH-HHHHHhccCCCCE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASAD-LVNFLLITESIDT 83 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~d~ 83 (668)
++|+|||||||||||++|++.|+++ +++|+++.|.........+ ....+++++.+|+.|.. .+..++ .++|+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~---~~~~~v~~~~gD~~d~~~~~~~a~--~~~~~ 74 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEEL---QAIPNVTLFQGPLLNNVPLMDTLF--EGAHL 74 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHH---HTSTTEEEEESCCTTCHHHHHHHH--TTCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhh---cccCCCEEEEeeCCCcHHHHHHHh--cCCce
Confidence 5689999999999999999999999 5677777775432221111 22458999999999854 466677 77898
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHH
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 163 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK 163 (668)
+++...... ..++..+.++++++.+.+ ++++|++||........ ..+..+|..+|
T Consensus 75 ~~~~~~~~~------------~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~------------~~~~~~~~~~k 129 (350)
T d1xgka_ 75 AFINTTSQA------------GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYG------------PWPAVPMWAPK 129 (350)
T ss_dssp EEECCCSTT------------SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTS------------SCCCCTTTHHH
T ss_pred EEeeccccc------------chhhhhhhHHHHHHHHhC-CCceEEEeeccccccCC------------cccchhhhhhH
Confidence 887654321 135667899999999988 77888888865433221 22345688888
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHH-HHHcCC-CceeecCCCceEeceeH-HHHHHHHHHHHh
Q 005949 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFIL-LAMRGL-PLPIHGDGSNVRSYLYC-EDVAEAFECILH 240 (668)
Q Consensus 164 ~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~i~v-~D~a~ai~~~~~ 240 (668)
...|.+++ +.+++++++|++.+++......... +.. ....+. ....+.++...+.++++ +|+++++..++.
T Consensus 130 ~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~ 203 (350)
T d1xgka_ 130 FTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPL--FQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK 203 (350)
T ss_dssp HHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSS--CBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----hhccCceeeeeceeecccccccccc--ccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHh
Confidence 88887664 3479999999999887533111100 000 001111 22334567788888885 799999998886
Q ss_pred cCC---CCceEEEcCCCcccHHHHHHHHHHHhCCCCC
Q 005949 241 KGE---VGHVYNVGTKKERRVIDVAKDICKLFSMDPE 274 (668)
Q Consensus 241 ~~~---~~~~~ni~~~~~~s~~el~~~i~~~~g~~~~ 274 (668)
.+. .|+.|++++ +.+|+.|+++.+.+.+|.+..
T Consensus 204 ~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~ 239 (350)
T d1xgka_ 204 DGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT 239 (350)
T ss_dssp HCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred CChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcce
Confidence 532 578899985 679999999999999998743
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.81 E-value=1.4e-20 Score=181.17 Aligned_cols=211 Identities=9% Similarity=0.068 Sum_probs=145.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhcCCCEEEEcccccC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
|++|||||||||||+++++.|+++|+++ +++.+|+++.+.+.++++++ |+|||+|+...
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~vi~~a~~~~ 80 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGI--DALVILTSAVP 80 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTC--SEEEECCCCCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccc--eeeEEEEeecc
Confidence 6799999999999999999999999853 45568899999999999977 99999998651
Q ss_pred CCC----------ccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecc-eeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 444 RPN----------VDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATG-CIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 444 ~~~----------~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
.+. ............++|+.++.++++.+.........+.|+ ..+.. .........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-------------~~~~~~~~~ 147 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP-------------DHPLNKLGN 147 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT-------------TCGGGGGGG
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCC-------------Ccccccccc
Confidence 000 011123344556788999999999999988855544443 22210 000011122
Q ss_pred CcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhccc--ceeecCCCcccHhhHHHHHHHHHhcc--CCc
Q 005949 513 SFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYN--KVVNIPNSMTVLDELLPISIEMAKRN--LRG 588 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g 588 (668)
..|...+.+.+.+.. ..+++++++|++++||+......++.+. .......+++|++|+|++++.+++++ .++
T Consensus 148 ~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~ 223 (252)
T d2q46a1 148 GNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNK 223 (252)
T ss_dssp CCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTE
T ss_pred cchhhhhhhhhhhhh----cccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCc
Confidence 345555555555443 3678999999999999974332222221 12234458999999999999999876 456
Q ss_pred eeeecCCC---ccCHHHHHHHHHhhcC
Q 005949 589 IWNFTNPG---VVSHNEILEMYKKYIN 612 (668)
Q Consensus 589 ~~ni~~~~---~~s~~e~~~~i~~~~g 612 (668)
+|||+++. ..++.++.+++.++.+
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 224 AFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred EEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 99999753 4568888888776644
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=2.8e-20 Score=173.99 Aligned_cols=182 Identities=15% Similarity=0.105 Sum_probs=126.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc--c-----------ccccCChhHHHHHhhhcCCCEEEEcccccCCCCcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY--G-----------KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWC 450 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~--~-----------~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~ 450 (668)
+||||||||||||++|+++|+++|+.+.+ . ..+..|..++.+.+.. .+|+|||++|.. ...
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~-~~d~vi~~~g~~-----~~~ 76 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG-SIDTAFCCLGTT-----IKE 76 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCS-CCSEEEECCCCC-----HHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhcccc-chheeeeeeeee-----ccc
Confidence 58999999999999999999999984322 1 1223333333333322 579999999855 223
Q ss_pred ccccccceehhhhhhHHHHHHHHHcCCc-EEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhc
Q 005949 451 ESHKTDTIRTNVAGTLTLADVCRDHGIL-MMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY 529 (668)
Q Consensus 451 ~~~~~~~~~~Nv~~~~~ll~~~~~~~~~-~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~ 529 (668)
......+.+.|+.++.+++++|++.+++ ++++||..+++ .+.+.|+.+|..+|+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~--------------------~~~~~y~~~K~~~E~~l~~~ 136 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------------------KSSIFYNRVKGELEQALQEQ 136 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------------------TCSSHHHHHHHHHHHHHTTS
T ss_pred cccccccccchhhhhhhccccccccccccccccccccccc--------------------ccccchhHHHHHHhhhcccc
Confidence 3455678889999999999999999985 66667655441 12378999999999998764
Q ss_pred cCeeEeEEeeeecCCCCChhhHHH--HhhcccceeecCC--CcccHhhHHHHHHHHHhccCCceeeecC
Q 005949 530 DNVCTLRVRMPISSDLNNPRNFIT--KISRYNKVVNIPN--SMTVLDELLPISIEMAKRNLRGIWNFTN 594 (668)
Q Consensus 530 ~~~~~l~~~~~r~~~~~g~~~~~~--~~~~~~~~~~~~~--~~~~v~D~a~~~~~~~~~~~~g~~ni~~ 594 (668)
.- -+++++||+.+||+..... ..+........+. .++|++|+|++++.+++++..|.+++.+
T Consensus 137 ~~---~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~~~~~ 202 (212)
T d2a35a1 137 GW---PQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVES 202 (212)
T ss_dssp CC---SEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCCSEEEEEEH
T ss_pred cc---ccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCCCCCEEEEH
Confidence 21 1578999999999863111 1111111111112 5689999999999999988778776654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=2.9e-20 Score=172.63 Aligned_cols=179 Identities=11% Similarity=0.077 Sum_probs=131.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhcCCCEEEEcccccCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
|+||+|+||||+||++++++|+++||+| +++.+|++|.+++.++++++ |+|||++|..
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~--d~vi~~~g~~-- 78 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQ--DAVIVLLGTR-- 78 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTC--SEEEECCCCT--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCC--CEEEEEeccC--
Confidence 5699999999999999999999999954 56778999999999999987 9999999854
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHH
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVE 523 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E 523 (668)
.+....+.+..++.+++++++++++ +++++||+.+|+..... + .....|...|..+|
T Consensus 79 --------~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~-------------~-~~~~~~~~~~~~~e 136 (205)
T d1hdoa_ 79 --------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV-------------P-PRLQAVTDDHIRMH 136 (205)
T ss_dssp --------TCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-------------C-GGGHHHHHHHHHHH
T ss_pred --------CchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc-------------c-ccccccchHHHHHH
Confidence 1223346788999999999999999 56677777666432221 1 22246889999999
Q ss_pred HHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc--CCceeeec
Q 005949 524 ELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--LRGIWNFT 593 (668)
Q Consensus 524 ~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--~~g~~ni~ 593 (668)
+++++ .+++++++||+.+++.... ...........+..+++.+|+|++++.+++++ .+..+.++
T Consensus 137 ~~l~~----~~~~~tiirp~~~~~~~~~--~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 137 KVLRE----SGLKYVAVMPPHIGDQPLT--GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp HHHHH----TCSEEEEECCSEEECCCCC--SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred HHHHh----cCCceEEEecceecCCCCc--ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 98876 5789999999876643110 00000001123447899999999999999876 34455544
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.9e-17 Score=156.74 Aligned_cols=225 Identities=16% Similarity=0.134 Sum_probs=161.2
Q ss_pred CC-CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC
Q 005949 1 MA-TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE 79 (668)
Q Consensus 1 m~-~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (668)
|. +.++|++|||||++.||+++++.|+++ +++|++.+|... .++.+..+ ..++..+.+|++|.+.+++++++.
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~--~l~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 74 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQA--DLDSLVRE--CPGIEPVCVDLGDWEATERALGSV 74 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHTTC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHH--HHHHHHHh--cCCCeEEEEeCCCHHHHHHHHHHh
Confidence 54 247899999999999999999999999 789999998642 22222222 236788999999999999998654
Q ss_pred -CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 80 -SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 80 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
++|++||+||..... .+.+++...+++|+.++..+.+.+.. .+.-.++|++||...+.....
T Consensus 75 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------- 145 (244)
T d1pr9a_ 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------- 145 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT---------
T ss_pred CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc---------
Confidence 699999999975532 23455667899999999888875542 233579999999776443321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|...+.+.+.++.+ +++++..+.||.|..+.......-+...+...+.-++ ..+..
T Consensus 146 -----~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~ 211 (244)
T d1pr9a_ 146 -----HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAE 211 (244)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBC
T ss_pred -----hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcC
Confidence 346999999999999998765 3899999999999876321111111223333333221 13567
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+|+|+++..++... -.|+.+.+.+|-
T Consensus 212 peevA~~v~fL~S~~a~~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCchhCCcCCcEEEECccH
Confidence 899999999888543 257788887664
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=7e-17 Score=152.47 Aligned_cols=219 Identities=20% Similarity=0.149 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||++.||+++++.|+++ +++|++.+|... .++... ...+.+.+.+|++|++.+.++++.
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~l~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEG--PLREAA---EAVGAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHH---HTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHH---HHcCCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999 789999998642 222221 123578899999999998887643
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-..++++||....+.+
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~------------ 143 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------ 143 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC------------
Confidence 379999999997543 2334556789999999999998766532 224567777775443322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|...+.+.+.++.++ |+++..+.||.|-.+... .............-++. .+...
T Consensus 144 ---~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~pl~---------R~~~p 209 (242)
T d1ulsa_ 144 ---GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA--KVPEKVREKAIAATPLG---------RAGKP 209 (242)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS--SSCHHHHHHHHHTCTTC---------SCBCH
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh--cCCHHHHHHHHhcCCCC---------CCCCH
Confidence 23469999999999999887653 899999999999877542 22233333333332221 24578
Q ss_pred HHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 229 EDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 229 ~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+|+|+++..++... -.|+.+.+.+|..
T Consensus 210 edia~~v~fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence 89999999888543 2578888887754
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.74 E-value=3.6e-17 Score=153.82 Aligned_cols=213 Identities=15% Similarity=0.135 Sum_probs=152.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++++|++|||||++.||+++++.|+++ +++|++.+|... ...++..+.+|++|++.+.++++.
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSG-----------APKGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSC-----------CCTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcc-----------hhcCceEEEEecCCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999 789999998532 123567899999999998877642
Q ss_pred -CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|++||+||.... ..+.+++...+++|+.++..+.+.+. +.+ -.++|++||...+.+..
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~--------- 140 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG--------- 140 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC--------------
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCc---------
Confidence 379999999997542 23345567889999999888776443 333 56999999976643322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.+..+... .+.........+.-++ ..+.
T Consensus 141 -----~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~pl---------~R~~ 204 (237)
T d1uzma1 141 -----NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR--ALDERIQQGALQFIPA---------KRVG 204 (237)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--HSCHHHHHHHGGGCTT---------CSCB
T ss_pred -----ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh--ccCHHHHHHHHhcCCC---------CCCc
Confidence 1346999999999999988765 4899999999998765321 0111122222222111 1356
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+|+|+++..++... -.|+.+.+.+|-
T Consensus 205 ~pedvA~~v~fL~S~~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 205 TPAEVAGVVSFLASEDASYISGAVIPVDGGM 235 (237)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence 7899999999888543 257888887763
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.73 E-value=2.2e-17 Score=157.03 Aligned_cols=223 Identities=13% Similarity=0.118 Sum_probs=159.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 2 ATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 2 ~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
.+.++|.+|||||++.||+++++.|+++ +++|++.+|... .++.... .....++..+.+|++|++.+.++++.
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~--~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~ 81 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQK--SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKI 81 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHH--HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3567899999999999999999999999 789999998542 2221111 11234688999999999998877743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+.+..
T Consensus 82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~------ 154 (251)
T d2c07a1 82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV------ 154 (251)
T ss_dssp HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT------
T ss_pred HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCC------
Confidence 4799999999975532 2334566788999999988887653 333 47999999976643322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... .......+.....-++.
T Consensus 155 --------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~--~~~~~~~~~~~~~~pl~--------- 215 (251)
T d2c07a1 155 --------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD--KISEQIKKNIISNIPAG--------- 215 (251)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCTTS---------
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc--ccCHHHHHHHHhcCCCC---------
Confidence 1346999999999999998765 4899999999999877542 22334444444433221
Q ss_pred eceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
-+...+|+|.++..++.... .|+.+.+.+|-
T Consensus 216 R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 249 (251)
T d2c07a1 216 RMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL 249 (251)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence 25678999999998885432 57888888764
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.73 E-value=2.2e-17 Score=155.92 Aligned_cols=222 Identities=18% Similarity=0.122 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccC-CCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITE-SID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d 82 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .+..+..+ ..++..+.+|++|.+.+++++++. ++|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~g~iD 76 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNS--DLVSLAKE--CPGIEPVCVDLGDWDATEKALGGIGPVD 76 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHh--cCCCeEEEEeCCCHHHHHHHHHHcCCCe
Confidence 47899999999999999999999999 789999998642 22222211 246888999999999999998664 689
Q ss_pred EEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
++||+||..... .+.+++...+++|+.++..+.+.+.. .+.-.++|++||...+.....
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------- 143 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------------- 143 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------------
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-------------
Confidence 999999975532 23445667899999999998875532 233468999999766443321
Q ss_pred CCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
...|+.+|...+.+.+.++.+ +|+++..+-||.+-.|.......-+..........++ ..+...+|+
T Consensus 144 -~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peev 213 (242)
T d1cyda_ 144 -LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDV 213 (242)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHH
T ss_pred -cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHH
Confidence 346999999999999998765 3799999999998765210000001222222222211 125678999
Q ss_pred HHHHHHHHhcC---CCCceEEEcCCC
Q 005949 232 AEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 232 a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
|+++..++... ..|+.+.+.+|.
T Consensus 214 a~~v~fL~S~~s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 214 VNSILFLLSDRSASTSGGGILVDAGY 239 (242)
T ss_dssp HHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred HHHHHHHhCchhcCcCCceEEeCcch
Confidence 99999888543 257888888764
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.72 E-value=8.7e-17 Score=152.46 Aligned_cols=223 Identities=15% Similarity=0.108 Sum_probs=152.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|.+|||||++.||+++++.|+++ +++|++.+|..... .... ......++..+.+|++|++++.++++.
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~-~~~~-~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPE-AEAA-IRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHH-HHHH-HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHH-HHHH-HHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999 78999998864311 1111 112345788999999999998877632
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+ -.++|++||.....+..
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~---------- 147 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE---------- 147 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS----------
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCc----------
Confidence 479999999997653 23445667899999999999887664 333 47999999976643322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+..... .......... ... .....+..
T Consensus 148 ----~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~-~~~-------~~l~r~~~ 214 (247)
T d2ew8a1 148 ----AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS-ALSAMFDVLP-NML-------QAIPRLQV 214 (247)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTT-------SSSCSCCC
T ss_pred ----ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc-ccchhHHHHH-HHh-------ccCCCCCC
Confidence 1346999999999999998765 489999999999877643211 1101111100 000 01113557
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+|+|++++.++... -.|+.+.+.+|-
T Consensus 215 pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 215 PLDLTGAAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred HHHHHHHHHHHhCchhcCCcCCeEEECCCE
Confidence 899999999888543 257888888764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.71 E-value=6.7e-17 Score=153.07 Aligned_cols=223 Identities=13% Similarity=0.051 Sum_probs=155.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|..... ... ...+...+++|++|.+++.++++.
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~---~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 74 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGK---EVA---EAIGGAFFQVDLEDERERVRFVEEAAYAL 74 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHH---HHH---HHHTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHH---HHH---HHcCCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999 78999999864321 111 112457889999999988777642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|++||+||.... +.+.+++...+++|+.++.++.+++... ..-.++|++||...+.+..
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~----------- 143 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ----------- 143 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT-----------
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc-----------
Confidence 479999999997543 2234456678999999999988876532 2246999999977654332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.|.... ........+...+.. ....
T Consensus 144 ---~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------pl~R 211 (248)
T d2d1ya1 144 ---ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH---------ALRR 211 (248)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS---------TTSS
T ss_pred ---ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC---------CCCC
Confidence 2346999999999999988765 38999999999886542100 000001111111111 1123
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
+...+|+++++..++... -.|+.+.+.+|-+.|
T Consensus 212 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 212 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred CcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence 567899999999888543 257889998776443
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.71 E-value=2.5e-16 Score=149.39 Aligned_cols=221 Identities=15% Similarity=0.077 Sum_probs=155.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||++++++|+++ +++|++.+|... .+.....+ ...++.++.+|++|++.++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDE--EGAATARE-LGDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHT-TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999 789999998642 22222111 134688999999999998887742
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+....
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~---------- 146 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA---------- 146 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhccccc----------
Confidence 4799999999976532 2334556789999999999888664 323 57999999977644332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeec-CCCceEece
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHG-DGSNVRSYL 226 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i 226 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.|..+. .........-.... -+.. |--.
T Consensus 147 ----~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~----------~~~~~~~~~~~~~~~~pl~-R~g~ 211 (254)
T d1hdca_ 147 ----LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM----------TAETGIRQGEGNYPNTPMG-RVGN 211 (254)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH----------HHHHTCCCSTTSCTTSTTS-SCB-
T ss_pred ----chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc----------chhcCHHHHHHHHhCCCCC-CCCC
Confidence 2346999999999999998765 47999999999986541 11111111000000 0001 1113
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+|+|.+++.++... -.|+.+.+.+|.+
T Consensus 212 ~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred CHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence 5799999999888543 2578899987753
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.71 E-value=8.9e-17 Score=151.51 Aligned_cols=216 Identities=17% Similarity=0.122 Sum_probs=156.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++.+..+ ...++..+.+|++|++.+.+++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDE--EGKAMAAE-LADAARYVHLDVTQPAQWKAAVDTAVTAF 78 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hhCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999 789999998642 22222211 124678899999999998877642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+.+. +.+ -.++|++||...+.+...
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~--------- 148 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVA--------- 148 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT---------
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccccccc---------
Confidence 479999999997653 22345567899999999999887553 223 468999999776543321
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
...|+.+|...+.+.+.++.+ +|+++..+-||.|-.|...... ......+ ...+..
T Consensus 149 -----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---------~~~~~~p-------l~R~~~ 207 (244)
T d1nffa_ 149 -----CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP---------EDIFQTA-------LGRAAE 207 (244)
T ss_dssp -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC---------TTCSCCS-------SSSCBC
T ss_pred -----ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh---------HHHHhcc-------ccCCCC
Confidence 346999999999999998765 4899999999998876431000 0000111 123678
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+|+|++++.++... ..|+.+.+.+|..
T Consensus 208 p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 208 PVEVSNLVVYLASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence 999999999888542 2578888887753
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.71 E-value=4.4e-17 Score=153.98 Aligned_cols=220 Identities=15% Similarity=0.095 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++.+... ...+...+.+|++|++.++++++.
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~--~l~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSEN--GAQAISDY-LGANGKGLMLNVTDPASIESVLEKIRAEF 76 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHH-hCCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence 46899999999999999999999999 789999998642 22222111 134678899999999988777642
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... ...+++...+++|+.++..+.+++. +.+ -.++|++||...+.+..
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~---------- 145 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNG---------- 145 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCC----------
Confidence 3799999999976532 2344566789999999999888764 323 47999999976643322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+... ...+..........++ ..+..
T Consensus 146 ----~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~pl---------~R~~~ 210 (243)
T d1q7ba_ 146 ----GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR--ALSDDQRAGILAQVPA---------GRLGG 210 (243)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH--TSCHHHHHHHHTTCTT---------SSCBC
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh--hhhhhHHHHHHhcCCC---------CCCCC
Confidence 1346999999999999998765 4899999999998755321 1122222333332221 13567
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+|+|.++..++... -.|+.+.+.+|-
T Consensus 211 pedvA~~v~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 211 AQEIANAVAFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence 899999999888643 257888888764
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.70 E-value=1e-16 Score=153.05 Aligned_cols=227 Identities=15% Similarity=0.104 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||++.||+++++.|+++ +++|++.+|.... .++.+.. .....++..+.+|++|++++.++++.
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKED-EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHH-HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999 7899999886421 1111111 11234678899999999998877642
Q ss_pred --CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++. +.+.-..+|++||...+.+..
T Consensus 82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~-------- 153 (261)
T d1geea_ 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP-------- 153 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------
T ss_pred HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc--------
Confidence 479999999997543 23345567889999999888876553 333234688999976543322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEec
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSY 225 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.|-.|.......-+.......+.-++ .-+
T Consensus 154 ------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~ 218 (261)
T d1geea_ 154 ------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM---------GYI 218 (261)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT---------SSC
T ss_pred ------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCC---------CCC
Confidence 1346999999999999988765 3899999999999866431000001122222222221 125
Q ss_pred eeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 226 LYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 226 i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
...+|+|++++.++... -.|+.+.+.+|..+
T Consensus 219 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 219 GEPEEIAAVAAWLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence 57899999999888543 25789999887643
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.70 E-value=2e-16 Score=151.15 Aligned_cols=225 Identities=11% Similarity=0.021 Sum_probs=157.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC--cCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS--KASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
++++|++|||||++.||+++++.|+++ +++|++.+|... .++....+ ....++..+.+|++|++.+.++++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQK--ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVA 80 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999 788999998542 22221111 123467889999999998877653
Q ss_pred -c-C-CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 78 -T-E-SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 78 -~-~-~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
+ . ++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|++||........
T Consensus 81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~------- 153 (259)
T d2ae2a_ 81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP------- 153 (259)
T ss_dssp HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT-------
T ss_pred HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc-------
Confidence 2 2 58999999997553 2334456679999999998888765431 2247999999976643322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC---CCChHHHHHHHHHcCCCceeecCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF---PEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.|-.|... ...............-++
T Consensus 154 -------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl-------- 218 (259)
T d2ae2a_ 154 -------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-------- 218 (259)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT--------
T ss_pred -------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC--------
Confidence 2356999999999999998865 3899999999998765320 011111222222222221
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
..+...+|+|++++.++... -.|+.+.+.+|-
T Consensus 219 -~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 219 -RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 12557899999999888643 257888888764
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=1.6e-16 Score=150.92 Aligned_cols=226 Identities=16% Similarity=0.121 Sum_probs=157.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
++++|++|||||++.||+++++.|+++ +++|++.+|.... +..... .....++..+.+|++|++.+.++++.
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~--~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEE--ASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 77 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHH--HHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence 467899999999999999999999999 7899999986421 111111 11234688899999999998877743
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+.+... ..-.++|++||........
T Consensus 78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~------- 150 (251)
T d1vl8a_ 78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM------- 150 (251)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC-------
Confidence 3799999999975432 244456678999999999988765432 2246999999865422111
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
.....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+.......-+.......+.-++. .
T Consensus 151 ------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R 215 (251)
T d1vl8a_ 151 ------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG---------R 215 (251)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS---------S
T ss_pred ------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC---------C
Confidence 11346999999999999998765 48999999999998765310000012222333322221 2
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+...+|+|++++.++... -.|+.+.+.+|.
T Consensus 216 ~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 216 TGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence 346789999999888543 257888888764
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.69 E-value=1.3e-16 Score=152.24 Aligned_cols=224 Identities=18% Similarity=0.134 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++.+..+ ...++..+.+|++|++++.++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~-~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 77 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLE--AARATAAE-IGPAACAIALDVTDQASIDRCVAELLDRW 77 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHH--HHHHHHHH-HCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hCCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999 789999998532 22222211 135788999999999998887743
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+++.. .+.-.++|++||...+.+..
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------- 147 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA---------- 147 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc----------
Confidence 4799999999975532 23445667899999999998875432 23346999999977643322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHH-----------HHHHHcCCCceee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKF-----------ILLAMRGLPLPIH 216 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 216 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|... .....+ .+.....-+
T Consensus 148 ----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P---- 217 (256)
T d1k2wa_ 148 ----LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD--GVDAKFADYENLPRGEKKRQVGAAVP---- 217 (256)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH--HHHHHHHHHHTCCTTHHHHHHHHHST----
T ss_pred ----cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh--hhhhhhhhhccCChHHHHHHHHhcCC----
Confidence 1346999999999999988765 4899999999988876420 011111 111111111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
..-+...+|+|.+++.++... -.|+.+.+.+|..+|
T Consensus 218 -----lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 218 -----FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp -----TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred -----CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 112567899999999887543 257889998876543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.69 E-value=1.1e-16 Score=152.82 Aligned_cols=224 Identities=14% Similarity=0.100 Sum_probs=144.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
++++|++|||||++.||+++++.|+++ +++|++.+|... .++.... .....++..+.+|++|++.+.++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~--~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEY--ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVS 80 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999 689999998642 2221111 1123468999999999998877663
Q ss_pred -c--CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 78 -T--ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 78 -~--~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
+ ..+|++||+||.... +.+.+++...+++|+.++..+.+.+.. .+ -.++|++||........
T Consensus 81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~------ 153 (259)
T d1xq1a_ 81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS------ 153 (259)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC---------------
T ss_pred HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccc------
Confidence 2 358999999997542 234455678999999999988876543 23 46999999966543221
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +|+++..+-||.|-.|.... ..-....+...... + ..
T Consensus 154 --------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~--p-------l~ 215 (259)
T d1xq1a_ 154 --------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA-VYDDEFKKVVISRK--P-------LG 215 (259)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------
T ss_pred --------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh-hchHHHHHHHHhCC--C-------CC
Confidence 2457999999999999988765 38999999999987764311 00111111111111 1 11
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+...+|+|.+++.++... -.|+.+.+.+|-.
T Consensus 216 R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 216 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT 250 (259)
T ss_dssp --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEE
Confidence 2456789999999888532 2577888877653
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=1.4e-16 Score=151.67 Aligned_cols=221 Identities=15% Similarity=0.121 Sum_probs=157.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
++|++|||||++.||+++++.|+++ |++|++.+|... .++.... .....++..+.+|++|++.+.++++.
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINAD--AANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999 788999998542 2221111 11234688999999999998777632
Q ss_pred -CCCCEEEEcCccCCc---ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV---DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+.+.. .+ -.++|++||...+....
T Consensus 86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~---------- 154 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI---------- 154 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT----------
T ss_pred cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcccc----------
Confidence 479999999997543 233445667899999999988875543 23 35899999976644332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEecee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLY 227 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+.... ..-+.......+.-++. -+..
T Consensus 155 ----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~-~~~~e~~~~~~~~~pl~---------R~g~ 220 (255)
T d1fmca_ 155 ----NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPIR---------RLGQ 220 (255)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCCHHHHHHHHHTCSSC---------SCBC
T ss_pred ----ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhc-cCCHHHHHHHHhcCCCC---------CCcC
Confidence 2346999999999999998765 38999999999987653211 11123333333332211 2457
Q ss_pred HHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 228 CEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 228 v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.+|+|.+++.++... -.|+.+.+.+|.
T Consensus 221 pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 221 PQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 899999999988643 257889998775
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=5.4e-16 Score=146.77 Aligned_cols=223 Identities=19% Similarity=0.169 Sum_probs=155.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++.+..+ ..++..+.+|++|.+.++++++.
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDES--GGRALEQE--LPGAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHh--cCCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999 789999998642 22222211 24688999999999998887743
Q ss_pred CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|++||+||.... +...+++...+++|+.++..+.+++... ..-.++|++||...+....
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~----------- 146 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA----------- 146 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc-----------
Confidence 479999999996432 1233446688999999999888766432 0126999999976643322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC----CCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF----PEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.|-.|... .........+......++ .-
T Consensus 147 ---~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R 214 (250)
T d1ydea1 147 ---QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GR 214 (250)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SS
T ss_pred ---CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CC
Confidence 1347999999999999998765 3899999999998654210 000111122222222221 13
Q ss_pred ceeHHHHHHHHHHHHhcCC--CCceEEEcCCCc
Q 005949 225 YLYCEDVAEAFECILHKGE--VGHVYNVGTKKE 255 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~~~ 255 (668)
+...+|+|++++.++.... .|+.+.+.+|..
T Consensus 215 ~g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 215 MGQPAEVGAAAVFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred CCCHHHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence 5678999999998875322 577888887754
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.68 E-value=5.2e-16 Score=147.94 Aligned_cols=227 Identities=14% Similarity=0.122 Sum_probs=158.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+++|++|||||++.||+++++.|+++ |++|++.+|...... ...+.......++..+.+|++|++++.++++.
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 79 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 46799999999999999999999999 789999998642110 11111122334688899999999998877642
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|++||...+....
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-------- 151 (258)
T d1iy8a_ 80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG-------- 151 (258)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS--------
T ss_pred HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC--------
Confidence 479999999996432 2234456689999999999988866321 1247899999976643322
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC------CCChHHHHHHHHHcCCCceeecCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF------PEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.|..|... ...............-++
T Consensus 152 ------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl------ 219 (258)
T d1iy8a_ 152 ------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS------ 219 (258)
T ss_dssp ------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT------
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC------
Confidence 1346999999999999988765 3899999999998765210 000111222222222221
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.-+...+|+|.+++.++... -.|+.+.+.+|.+
T Consensus 220 ---~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 220 ---KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp ---CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred ---CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 12567899999999888543 2577899988764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.68 E-value=5e-16 Score=148.50 Aligned_cols=223 Identities=15% Similarity=0.117 Sum_probs=155.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++.... .....++..+.+|++|++.+.++++.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNRE--ALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR 78 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999 788999998642 1221111 11234688999999999988877643
Q ss_pred --CCCCEEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 --ESIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ..-.++|++||...+.+...
T Consensus 79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~------- 151 (260)
T d1zema1 79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN------- 151 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT-------
T ss_pred HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc-------
Confidence 479999999996532 2234456678899999999988766421 12479999999776544321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCC--------------CCCChHHHHHHHHHcCC
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ--------------FPEKLIPKFILLAMRGL 211 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~--------------~~~~~~~~~~~~~~~~~ 211 (668)
...|+.+|...+.+.+.++.++ |+++..+.||.|-.+.. ........+.+.....-
T Consensus 152 -------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 152 -------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp -------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 3469999999999999987654 79999999999876521 00111122222222222
Q ss_pred CceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCC
Q 005949 212 PLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTK 253 (668)
Q Consensus 212 ~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~ 253 (668)
++. -+...+|+|.+++.++.... .|+.+.+.+|
T Consensus 225 Pl~---------R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 225 PMR---------RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TTS---------SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCC---------CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 211 24567899999998886432 5677777654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.68 E-value=4e-16 Score=148.82 Aligned_cols=225 Identities=19% Similarity=0.140 Sum_probs=153.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
|.+|||||++.||+++++.|+++ |++|++.+|... .++.... .....++..+.+|++|++.+.++++. .
T Consensus 2 KValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDA--TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG 77 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 45699999999999999999999 789999998642 2222111 11234688999999999998877642 4
Q ss_pred CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|++||+||.... +.+.+++...+++|+.++.++.+++. +.+.-.++|++||...+.+..
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~----------- 146 (255)
T d1gega_ 78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------- 146 (255)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------
T ss_pred CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc-----------
Confidence 79999999997543 22344566789999999999887643 334346899999977643332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHH--cCCCce----eecCCCce
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAM--RGLPLP----IHGDGSNV 222 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~ 222 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.|. +..+..... .+.... -.......
T Consensus 147 ---~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 217 (255)
T d1gega_ 147 ---ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM------WAEIDRQVSEAAGKPLGYGTAEFAKRITL 217 (255)
T ss_dssp ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH------HHHHHHHHHHHHTCCTTHHHHHHHTTCTT
T ss_pred ---ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH------HhhhhhhhHhhhcccchhHHHHHHhcCCC
Confidence 1346999999999999998755 48999999999886542 112111110 000000 00000111
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+...+|+|++++.++... ..|+.+.+.+|-.
T Consensus 218 ~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 218 GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred CCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence 23567899999999888543 2578888887753
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.68 E-value=1.4e-16 Score=152.72 Aligned_cols=231 Identities=14% Similarity=0.086 Sum_probs=153.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC---CCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI---PSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|++|||||++.||+++++.|+++ +++|++.+|.... .++.+. ......++.++.+|++|++++.++++.
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~-~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAA-EIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHH-HHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999 7899999886421 111111 111234788999999999998887743
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+....
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~------- 150 (260)
T d1x1ta1 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA------- 150 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred HHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccC-------
Confidence 4799999999976532 2344566899999999988876653 333 46999999977644322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHH-cC-CC-ceeecCCCc
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAM-RG-LP-LPIHGDGSN 221 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~ 221 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.|... ..+........ .. .. .........
T Consensus 151 -------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P 221 (260)
T d1x1ta1 151 -------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE--KQISALAEKNGVDQETAARELLSEKQP 221 (260)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCT
T ss_pred -------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhh--hhhhhhhhhcCCChHHHHHHHHHhcCC
Confidence 1346999999999999998765 3799999999998766431 11111110000 00 00 000000001
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
...+...+|+|++++.++... -.|+.+.+.+|-
T Consensus 222 l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence 123568999999999888543 257888888764
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.68 E-value=5.6e-16 Score=147.72 Aligned_cols=226 Identities=12% Similarity=0.053 Sum_probs=156.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
++++|+||||||++.||+++++.|+++ +++|++.+|... .++.... ......+..+.+|+++.+.+++++.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~--~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~ 78 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEK--ELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVA 78 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHH
Confidence 357899999999999999999999999 689999998642 1111111 1123467889999999998877653
Q ss_pred -cC--CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 78 -TE--SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 78 -~~--~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
+. .+|++||+||.... +...+++...+++|+.++..+.+++... ....++|++||.....+..
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~------- 151 (258)
T d1ae1a_ 79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP------- 151 (258)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT-------
T ss_pred HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccc-------
Confidence 22 58999999997553 2244556789999999998888765421 2367999999987754432
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC----ChHHHHHHHHHcCCCceeecCCC
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE----KLIPKFILLAMRGLPLPIHGDGS 220 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 220 (668)
....|+.+|...+.+.+.++.++ ++++..+.||.+..|..... ..............++
T Consensus 152 -------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------- 217 (258)
T d1ae1a_ 152 -------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------- 217 (258)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-------
T ss_pred -------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-------
Confidence 13469999999999999987653 89999999999987643110 0111222222222111
Q ss_pred ceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 221 NVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 221 ~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+...+|+|.++..++... -.|+.+.+.+|-.
T Consensus 218 --gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s 253 (258)
T d1ae1a_ 218 --GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 253 (258)
T ss_dssp --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred --CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence 12568899999999988532 2577888887643
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.67 E-value=5.8e-16 Score=148.99 Aligned_cols=229 Identities=18% Similarity=0.183 Sum_probs=158.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCc-CCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSK-ASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+++|++|||||++.||+++++.|+++ +.+|++.+|... .++...... ....+.++.+|++|++++.++++.
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADD--HGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999 788999998542 222221111 234578899999999998887742
Q ss_pred -CCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 79 -ESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
.++|++||+||.... ....+++...+++|+.++..+.+++... ..-.++|++||...+.....
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~------- 152 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG------- 152 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-------
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc-------
Confidence 479999999996542 1223345678899999999888766431 12468999998765433211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC--CChHHHHHHHHHcCCCceeecCCCceE
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.|-.|.... ...-............ +. .
T Consensus 153 ------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~~-------g 218 (268)
T d2bgka1 153 ------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN-LK-------G 218 (268)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS-SC-------S
T ss_pred ------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc-cC-------C
Confidence 1236999999999999998765 48999999999998875421 1111222222222111 11 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
.+...+|+|++++.++... -.|+++.+.+|-+.+
T Consensus 219 r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~ 255 (268)
T d2bgka1 219 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT 255 (268)
T ss_dssp CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence 2567899999999888543 358899998886543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.67 E-value=2.2e-16 Score=150.03 Aligned_cols=223 Identities=14% Similarity=0.097 Sum_probs=154.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++..... ....++.++.+|++|++++.++++.
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSD--VGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999 788999998642 22221111 1234789999999999988877642
Q ss_pred -CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+++.. .+.-.++|++||...+.+..
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~--------- 150 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------- 150 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---------
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC---------
Confidence 4799999999976432 23445667899999999998876542 23224889999976543321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+....... ...... .....++ .-
T Consensus 151 -----~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~--~~~~~pl-------~R 215 (251)
T d1zk4a1 151 -----SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMS--QRTKTPM-------GH 215 (251)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHT--STTTCTT-------SS
T ss_pred -----CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHH--HHhCCCC-------CC
Confidence 1346999999999998876643 47999999999987653211000 011111 1111111 13
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
+...+|+|++++.++... -.|+.+.+.+|.
T Consensus 216 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 248 (251)
T d1zk4a1 216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CcCHHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence 568999999999888543 257788888764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.66 E-value=6.4e-16 Score=147.70 Aligned_cols=222 Identities=18% Similarity=0.188 Sum_probs=156.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+|.+|||||++.||+++++.|+++ +++|++.+|... .++.... .....++..+.+|++|++.+.++++.
T Consensus 2 gKValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEE--GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 77 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 578899999999999999999999 788999998632 2221111 11234688999999999998877642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc-----CCCcEEEEEcCccccCCCCCCcCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT-----GQIRRFIHVSTDEVYGETDEDAVVGNHE 149 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~v~~SS~~vyg~~~~~~~~~~~e 149 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... ....++|++||...+.+...
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~-------- 149 (257)
T d2rhca1 78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH-------- 149 (257)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT--------
T ss_pred CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc--------
Confidence 369999999997543 2234456689999999999999877431 12468999999766443321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCC---------CCChHHHHHHHHHcCCCceeec
Q 005949 150 ASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQF---------PEKLIPKFILLAMRGLPLPIHG 217 (668)
Q Consensus 150 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 217 (668)
...|+.+|...+.+.+.++.++ ++++..+.||.|-.|... .............+.-++
T Consensus 150 ------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl---- 219 (257)
T d2rhca1 150 ------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI---- 219 (257)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT----
T ss_pred ------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC----
Confidence 3469999999999999988764 799999999998654210 001112222333322221
Q ss_pred CCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 218 DGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 218 ~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.-+...+|+|.+++.++... -.|+.+.+.+|-
T Consensus 220 -----gR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ 254 (257)
T d2rhca1 220 -----GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 254 (257)
T ss_dssp -----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred -----CCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence 12567899999999888543 257788887663
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.66 E-value=1.9e-15 Score=143.64 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=152.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCC-CHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIA-SADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~--- 78 (668)
+++|+||||||++.||..++++|+++ +.+|+++.|.... ..+..+.......++.++.+|++ +.+.+.+++..
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999 6777766554321 11222222233447889999997 55555554421
Q ss_pred --CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc------CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT------GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||... .+++...+++|+.|+.++.+++... +...++|++||...+.+..
T Consensus 81 ~~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~---------- 146 (254)
T d1sbya1 81 QLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH---------- 146 (254)
T ss_dssp HHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT----------
T ss_pred HcCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC----------
Confidence 47999999999754 4677889999999999888766431 2246899999977654332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCC---CCC-ChHHHHHHHHHcCCCceeecCCCceE
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQ---FPE-KLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|.....+.+.++.+ +++++..+.||.|..+.. ... .....+... ..+ +
T Consensus 147 ----~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~------------~ 209 (254)
T d1sbya1 147 ----QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAEL-LLS------------H 209 (254)
T ss_dssp ----TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHH-HTT------------S
T ss_pred ----CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhc-ccc------------C
Confidence 1346999999999999988765 389999999999987521 000 000001111 111 1
Q ss_pred eceeHHHHHHHHHHHHhcCCCCceEEEcCCC
Q 005949 224 SYLYCEDVAEAFECILHKGEVGHVYNVGTKK 254 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~ 254 (668)
.....+++|++++.+++....|+++.+.+|.
T Consensus 210 ~~~~~e~va~~~~~~~~~~~tG~vi~vdgG~ 240 (254)
T d1sbya1 210 PTQTSEQCGQNFVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp CCEEHHHHHHHHHHHHHHCCTTCEEEEETTE
T ss_pred CCCCHHHHHHHHHHhhhCCCCCCEEEECCCE
Confidence 2346889999999999887788889888774
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=2.4e-15 Score=142.23 Aligned_cols=225 Identities=15% Similarity=0.095 Sum_probs=160.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-C
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT-E 79 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~ 79 (668)
|..+++|++|||||++.||+++++.|+++ +++|++.+|... .++.+ ....+++...+|+.+.+.++..... .
T Consensus 1 m~~l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~--~l~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~ 73 (245)
T d2ag5a1 1 MGRLDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINES--KLQEL---EKYPGIQTRVLDVTKKKQIDQFANEVE 73 (245)
T ss_dssp CCTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHGGG---GGSTTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHH---HhccCCceeeeeccccccccccccccc
Confidence 67778999999999999999999999999 789999998642 22222 2235688999999998888777643 4
Q ss_pred CCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccc-cCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEV-YGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~v-yg~~~~~~~~~~~e~~ 151 (668)
++|++||+||..... .+.+++...+++|+.++..+.+++... ..-.++|++||... ..
T Consensus 74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-------------- 139 (245)
T d2ag5a1 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK-------------- 139 (245)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB--------------
T ss_pred cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC--------------
Confidence 799999999976532 233456678899999999988766431 12468999998542 11
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCC----CChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP----EKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
+......|+.+|...+.+++.++.++ |+++..+.||.|-.|.... ......+.......-++ ..
T Consensus 140 ~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R 210 (245)
T d2ag5a1 140 GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GR 210 (245)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SS
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CC
Confidence 11224569999999999999987653 8999999999998763210 01111222222222221 13
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+...+|+++++..++... -.|+.+.+.+|.+
T Consensus 211 ~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence 568899999999988643 2578888887754
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=2e-16 Score=150.91 Aligned_cols=222 Identities=14% Similarity=0.043 Sum_probs=153.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
.+|++|||||++.||+++++.|+++ |.+|++.+|..... ....+.......++..+.+|++|.+.+.++++.
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999 78999999864311 111111222234688999999999988877632
Q ss_pred -CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHH----c--CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 79 -ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----T--GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
.++|++||+||... ..++.+.+++|+.++.++..++.. . +.-.++|++||...+-+..
T Consensus 80 ~G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~----------- 144 (254)
T d2gdza1 80 FGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA----------- 144 (254)
T ss_dssp HSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------
T ss_pred cCCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC-----------
Confidence 47999999999864 356788999999888877765542 1 1225799999977643322
Q ss_pred CCCCCChhHHHHHHHHHHHHH--HHH---hcCCCEEEEeeCceeCCCCCC----------CChHHHHHHHHHcCCCceee
Q 005949 152 QLLPTNPYSATKAGAEMLVMA--YGR---SYGLPVITTRGNNVYGPNQFP----------EKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~--~~~---~~~~~~~ilR~~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~ 216 (668)
....|+.+|...+.+.+. .+. .+++++..+.||.|-.|.... ......+.... ++
T Consensus 145 ---~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~------p~- 214 (254)
T d2gdza1 145 ---QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI------KY- 214 (254)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH------HH-
T ss_pred ---CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC------CC-
Confidence 134699999999998874 232 358999999999886542100 00011111110 11
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCcccHH
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKERRVI 259 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~~s~~ 259 (668)
..+...+|+|++++.++..+. .|+++.+.+|..+.++
T Consensus 215 ------~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~ 252 (254)
T d2gdza1 215 ------YGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ 252 (254)
T ss_dssp ------HCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred ------CCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence 124567899999999987654 5788999888765543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.63 E-value=1.6e-15 Score=142.95 Aligned_cols=221 Identities=19% Similarity=0.171 Sum_probs=156.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .+..... ....++..+++|+++++.+.+++..
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~--~~~~~~~-~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~ 77 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREER--LLAEAVA-ALEAEAIAVVADVSDPKAVEAVFAEALEEF 77 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH-TCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHH-HcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999 789999998643 2222111 1234688899999999998877642
Q ss_pred CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHcCC-CcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVTGQ-IRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
.++|++||+|+..... ...+++...+++|+.++..+.+++...-. -+.++.+||.+....+
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~-------------- 143 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-------------- 143 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH--------------
T ss_pred CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc--------------
Confidence 4799999999975432 23344567899999999999987765432 3345555554322111
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCED 230 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 230 (668)
....|+.+|.+.|.+.+.+++++ ++++..+.||.+-.+... .......+...+..++. .+...+|
T Consensus 144 -~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~--~~~~~~~~~~~~~~p~~---------r~~~p~d 211 (241)
T d2a4ka1 144 -GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA--GLPPWAWEQEVGASPLG---------RAGRPEE 211 (241)
T ss_dssp -HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT--TSCHHHHHHHHHTSTTC---------SCBCHHH
T ss_pred -CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH--hhhHhHHHHHHhCCCCC---------CCcCHHH
Confidence 13469999999999999988765 699999999999665431 22233444443333221 2557899
Q ss_pred HHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 231 VAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 231 ~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+|+++..++... -.|+.+.+.+|.+
T Consensus 212 va~~v~fL~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 212 VAQAALFLLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence 999999988643 2577888887754
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.63 E-value=7.7e-16 Score=146.27 Aligned_cols=222 Identities=16% Similarity=0.159 Sum_probs=152.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||++.||+++++.|+++ +++|++.+|... .++.+..+ ...+...+.+|++|.+.++++++.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEA--AGQQLAAE-LGERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHHH-HCTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-hCCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999 788999998542 22222221 134678899999999998877642
Q ss_pred CCCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCccccCCCCCCcCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDAVVGNHEASQ 152 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~ 152 (668)
.++|++||+||.... +.+.+++...+++|+.++..+.+++... .+-.++|++||...+.+..
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~------------ 146 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE------------ 146 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT------------
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc------------
Confidence 479999999997543 2234456789999999988888765431 1237999999976643322
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCC---CCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 153 LLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQ---FPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 153 ~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
....|+.+|...+.+.+..+.+ +++++..+-||.|..+.. .+.... +....... .. ...-.
T Consensus 147 --~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~----~~~~~~~~-~~----~~~gr 215 (253)
T d1hxha_ 147 --QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS----KEMVLHDP-KL----NRAGR 215 (253)
T ss_dssp --TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC----HHHHBCBT-TT----BTTCC
T ss_pred --ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhh----HHHHHhCc-cc----cccCC
Confidence 1346999999999999877654 358999999999876421 000000 00011100 00 01113
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
+...+|+|.+++.++... -.|+.+++.+|
T Consensus 216 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 216 AYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp EECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 567899999999888543 25788888766
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.63 E-value=1.2e-15 Score=146.08 Aligned_cols=230 Identities=15% Similarity=0.121 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
.++|++|||||++.||+++++.|+++ |++|++.+|... .+..... .....++..+.+|++|++.+.++++.
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAA--DAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCT--THHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999 789999998643 2211111 11235688999999999998877732
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+++.. .+.-..++..||...+.......
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~---- 158 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---- 158 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET----
T ss_pred HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc----
Confidence 4799999999975432 23445667889999999888765532 23345677777765543322110
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEe
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
........|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... .....+.......-++. -
T Consensus 159 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~--~~~~~~~~~~~~~~pl~---------R 224 (260)
T d1h5qa_ 159 ---NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA--HMDKKIRDHQASNIPLN---------R 224 (260)
T ss_dssp ---TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG--GSCHHHHHHHHHTCTTS---------S
T ss_pred ---ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh--ccCHHHHHHHHhcCCCC---------C
Confidence 01112346999999999999988764 4899999999999766432 12223333333332221 2
Q ss_pred ceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 225 YLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
+...+|+|.+++.++... -.|+.+.+.+|..
T Consensus 225 ~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 225 FAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred CcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence 456789999999888543 2578888887753
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.63 E-value=1.9e-15 Score=144.62 Aligned_cols=225 Identities=14% Similarity=0.087 Sum_probs=151.4
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 4 YTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
+++|++|||||+| .||++++++|+++ |++|++.+|...... .... .....+...+.+|++|++.+++++..
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKL--AEALGGALLFRADVTQDEELDALFAGVK 81 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH--HHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHh--hhccCcccccccccCCHHHHHHHHHHHH
Confidence 4679999999998 7999999999999 678888887532111 0011 11223567899999999998877642
Q ss_pred ---CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ---ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+|+.... +....++...+++|+.++..+.+.+... ..-.++|++||........
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~------ 155 (256)
T d1ulua_ 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------ 155 (256)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------
T ss_pred HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC------
Confidence 479999999997532 1222334567899999999988876532 1125899999976643322
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.+..+................+.-++ .
T Consensus 156 --------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl---------~ 218 (256)
T d1ulua_ 156 --------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------R 218 (256)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTT---------S
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCC---------C
Confidence 2456999999999999998765 3899999999999876543222122333333332222 1
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+...+|+|.++..++... -.|+.+.+.+|..
T Consensus 219 R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 2457899999999888643 2578888887754
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2.6e-15 Score=145.98 Aligned_cols=226 Identities=14% Similarity=0.163 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccC---CCcCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLI---PSKASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|..... ..+.+. ......++..+.+|++|++.+.++++.
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 87 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 87 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence 46899999999999999999999999 78899999864211 011111 112245788999999999998877642
Q ss_pred -----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 -----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||..... ...+++...+++|+.++..+.+++... ..-.++|.+||....+.+
T Consensus 88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~------- 160 (297)
T d1yxma1 88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP------- 160 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT-------
T ss_pred HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccc-------
Confidence 4799999999975422 233456678999999999988766432 113577877764332211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCC--ChHHHHHHHHHcCCCceeecCCCc
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
....|+.+|...+.+.+..+.++ |+++..+.||.|..+..... ..-..+....... .+
T Consensus 161 --------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~p------- 223 (297)
T d1yxma1 161 --------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--IP------- 223 (297)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG--ST-------
T ss_pred --------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc--CC-------
Confidence 13569999999999999988654 89999999999987643110 0000111111111 11
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..-+...+|+|.+++.++... -.|+++.+.+|..
T Consensus 224 lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 224 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 112557889999999988543 2688999988764
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.63 E-value=9.5e-16 Score=144.77 Aligned_cols=219 Identities=17% Similarity=0.103 Sum_probs=153.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-----C
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-----E 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~ 79 (668)
..||||||++.||++++++|+++ |++|++.++... ..++.+.. .....++..+.+|++|++.+.++++. .
T Consensus 2 pV~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSA-KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCH-HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCH-HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999 788887654321 11111111 11234688899999999998877642 4
Q ss_pred CCCEEEEcCccCCc----ccccCChHHHHHHHHHHHHHHHHHHHH----cCCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 80 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
++|++||+||.... +.+.+++...+++|+.++..+.+++.. .+ -.++|++||...+-+..
T Consensus 79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~----------- 146 (244)
T d1edoa_ 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNI----------- 146 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT-----------
T ss_pred CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCC-----------
Confidence 79999999997653 234455678999999999998876543 23 47999999976643322
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
....|+.+|...+.+.+.++.++ |+++..+.||.+-.+... ..............++ ..+...
T Consensus 147 ---~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~--~~~~~~~~~~~~~~pl---------~R~~~p 212 (244)
T d1edoa_ 147 ---GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA--KLGEDMEKKILGTIPL---------GRTGQP 212 (244)
T ss_dssp ---TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH--TTCHHHHHHHHTSCTT---------CSCBCH
T ss_pred ---CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH--HhhHHHHHHHHhcCCC---------CCCcCH
Confidence 13469999999999999988664 899999999998765321 1222333333333222 125678
Q ss_pred HHHHHHHHHHHhcC----CCCceEEEcCCC
Q 005949 229 EDVAEAFECILHKG----EVGHVYNVGTKK 254 (668)
Q Consensus 229 ~D~a~ai~~~~~~~----~~~~~~ni~~~~ 254 (668)
+|+|.++..++..+ -.|+.+.+.+|-
T Consensus 213 ~dvA~~v~fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 213 ENVAGLVEFLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence 99999999875332 257788887764
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2.6e-15 Score=143.02 Aligned_cols=214 Identities=18% Similarity=0.130 Sum_probs=146.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC----CCcCCCCeEEEEccCCCHHHHHHHh
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI----PSKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|..+++|.+|||||++.||.++++.|+++ |++|++.+|... .++.+. ......++..+.+|++|++.+.+++
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v 80 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVG--NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 80 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHH
Confidence 55567899999999999999999999999 788999988642 222221 1112346888999999999887766
Q ss_pred cc-----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcC-CCcEEEEEcCccccCCCCCC
Q 005949 77 IT-----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTG-QIRRFIHVSTDEVYGETDED 142 (668)
Q Consensus 77 ~~-----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~~v~~SS~~vyg~~~~~ 142 (668)
.. .++|++||+||..... .+.+++...++.|+.+...+.+.+. +.+ .-.++|++||...+...+.
T Consensus 81 ~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~- 159 (257)
T d1xg5a_ 81 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL- 159 (257)
T ss_dssp HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-
T ss_pred HHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC-
Confidence 32 4799999999976532 2344556788999999888776653 322 2469999999776433211
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCC--CCCChHHHHHHHHHcCCCcee
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMRGLPLPI 215 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~ 215 (668)
.....|+.+|...+.+.+.++.+ +++++..+-||.+-.+.. ........+... .+
T Consensus 160 -----------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~------~~- 221 (257)
T d1xg5a_ 160 -----------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT------YE- 221 (257)
T ss_dssp -----------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH------HC-
T ss_pred -----------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc------CC-
Confidence 11345999999999999887743 479999999987754421 001111111111 11
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~ 243 (668)
...++..+|+|++++.++..+.
T Consensus 222 ------~~r~~~pedvA~~v~fL~s~~a 243 (257)
T d1xg5a_ 222 ------QMKCLKPEDVAEAVIYVLSTPA 243 (257)
T ss_dssp ---------CBCHHHHHHHHHHHHHSCT
T ss_pred ------CCCCcCHHHHHHHHHHHhCChh
Confidence 1235689999999999987653
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.62 E-value=3.6e-15 Score=140.10 Aligned_cols=213 Identities=13% Similarity=0.105 Sum_probs=148.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCH-HHHHHHhccCCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA-DLVNFLLITESID 82 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d 82 (668)
+++|++|||||++.||+++++.|+++ +++|++.+|... .++ ....+++.+|+++. +.+.+.+ .++|
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~--~l~-------~~~~~~~~~Dv~~~~~~~~~~~--g~iD 68 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEE--LLK-------RSGHRYVVCDLRKDLDLLFEKV--KEVD 68 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHH-------HTCSEEEECCTTTCHHHHHHHS--CCCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHH-------hcCCcEEEcchHHHHHHHHHHh--CCCc
Confidence 57899999999999999999999999 789999998532 111 12456788999763 3333333 5799
Q ss_pred EEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 83 TIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 83 ~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||........
T Consensus 69 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~-------------- 133 (234)
T d1o5ia_ 69 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE-------------- 133 (234)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------------
T ss_pred EEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccccc--------------
Confidence 999999965432 2344566788999999888877653 333 46899999976644332
Q ss_pred CCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDV 231 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 231 (668)
....|+.+|...+.+.+.++.++ |+++..+.||.+-.+.... ..-........+.-++ ..+...+|+
T Consensus 134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~~pl---------~R~~~pedi 203 (234)
T d1o5ia_ 134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQIPM---------RRMAKPEEI 203 (234)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTSTT---------SSCBCHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh-hcCHHHHHHHHhcCCC---------CCCcCHHHH
Confidence 23469999999999998887653 8999999999987764210 0001122222222221 135679999
Q ss_pred HHHHHHHHhcC---CCCceEEEcCCC
Q 005949 232 AEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 232 a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
|.++..++... -.|+++.+.+|-
T Consensus 204 A~~v~fL~S~~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 204 ASVVAFLCSEKASYLTGQTIVVDGGL 229 (234)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHhChhhcCCcCcEEEECccc
Confidence 99999888543 257888888764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.62 E-value=8.4e-16 Score=155.16 Aligned_cols=200 Identities=15% Similarity=0.113 Sum_probs=134.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhH-HHHHhhhcCCCEEEEcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSS-LIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~-~~~~l~~~~~d~Vih~a~~ 441 (668)
++|+|||||||||+++++.|+++||+| +++.+|+.|..+ +..++..+ |++++....
T Consensus 4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~--~~~~~~~~~ 81 (350)
T d1xgka_ 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGA--HLAFINTTS 81 (350)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTC--SEEEECCCS
T ss_pred CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCC--ceEEeeccc
Confidence 579999999999999999999999965 455677777544 56666665 777766442
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHH
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKA 520 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~ 520 (668)
. ...|+..+.+++++|.+.++ +++++||...... ....+...|..+|.
T Consensus 82 ~---------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~----------------~~~~~~~~~~~~k~ 130 (350)
T d1xgka_ 82 Q---------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL----------------YGPWPAVPMWAPKF 130 (350)
T ss_dssp T---------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG----------------TSSCCCCTTTHHHH
T ss_pred c---------------cchhhhhhhHHHHHHHHhCCCceEEEeecccccc----------------CCcccchhhhhhHH
Confidence 2 23467888999999999997 6777777542211 11223367889999
Q ss_pred HHHHHHHhccCeeEeEEeeeecCCCCChh----h--HHHH-hhcccceee------cCCCccc-HhhHHHHHHHHHhcc-
Q 005949 521 MVEELLKEYDNVCTLRVRMPISSDLNNPR----N--FITK-ISRYNKVVN------IPNSMTV-LDELLPISIEMAKRN- 585 (668)
Q Consensus 521 ~~E~~~~~~~~~~~l~~~~~r~~~~~g~~----~--~~~~-~~~~~~~~~------~~~~~~~-v~D~a~~~~~~~~~~- 585 (668)
..|.++.+. .++++++|++..++.. . +... ...+..... ....+++ .+|+++++..++...
T Consensus 131 ~~~~~~~~~----~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~ 206 (350)
T d1xgka_ 131 TVENYVRQL----GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP 206 (350)
T ss_dssp HHHHHHHTS----SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHhh----ccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCCh
Confidence 999988774 3455566655443321 0 0000 111111111 1113444 489999999998643
Q ss_pred ---CCceeeecCCCccCHHHHHHHHHhhcCCCCCCCCCC
Q 005949 586 ---LRGIWNFTNPGVVSHNEILEMYKKYINPEFKWVNFT 621 (668)
Q Consensus 586 ---~~g~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 621 (668)
.+.+|++++ +.+|+.|+++.+.+.+|+++.+..+|
T Consensus 207 ~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp 244 (350)
T d1xgka_ 207 QKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP 244 (350)
T ss_dssp HHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred hhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECC
Confidence 356888876 67999999999999999987766555
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.61 E-value=5.6e-15 Score=141.68 Aligned_cols=225 Identities=15% Similarity=0.098 Sum_probs=148.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----C-cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----S-KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
.++|.+|||||++.||+++++.|+++ |++|++.+|... .++.... . ....++..+.+|++|.+.+.+++..
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~ 78 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAE--RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST 78 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHH
Confidence 57899999999999999999999999 789999998642 1211111 1 1223589999999999998877742
Q ss_pred -----CCCCEEEEcCccCCc--------ccccCChHHHHHHHHHHHHHHHHHHHHc--CCCcEEEEEcCcc-ccCCCCCC
Q 005949 79 -----ESIDTIMHFAAQTHV--------DNSFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDE-VYGETDED 142 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~v~~SS~~-vyg~~~~~ 142 (668)
.++|++||+||.... ..+.+++...+++|+.++..+.+++... ..-..+|.++|.. .+.+..
T Consensus 79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~-- 156 (264)
T d1spxa_ 79 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP-- 156 (264)
T ss_dssp HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT--
T ss_pred HHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC--
Confidence 479999999996421 1123456678899999998888766431 1124666666543 222211
Q ss_pred cCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCC-------hHHHHHHHHHcCCC
Q 005949 143 AVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEK-------LIPKFILLAMRGLP 212 (668)
Q Consensus 143 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~ 212 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+...... ..........+.-+
T Consensus 157 ------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P 224 (264)
T d1spxa_ 157 ------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP 224 (264)
T ss_dssp ------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT
T ss_pred ------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCC
Confidence 1345999999999999998765 3899999999999776431110 01111111111111
Q ss_pred ceeecCCCceEeceeHHHHHHHHHHHHhcC----CCCceEEEcCCCc
Q 005949 213 LPIHGDGSNVRSYLYCEDVAEAFECILHKG----EVGHVYNVGTKKE 255 (668)
Q Consensus 213 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~----~~~~~~ni~~~~~ 255 (668)
+ .-+...+|+|+++..++..+ -.|+.+.+.+|..
T Consensus 225 l---------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 225 A---------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp T---------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred C---------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 1 12457899999999888422 3678899987754
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.61 E-value=4.7e-15 Score=142.35 Aligned_cols=208 Identities=16% Similarity=0.163 Sum_probs=143.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
..+||||||+|.||.+++++|+++|.. +|+++.|+... .....+.. .....++.++.+|++|.+.+.+++..
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~-~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 469999999999999999999999532 57777775321 11111111 11234689999999999999888743
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL 154 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~ 154 (668)
.++|.|||++|...... ...+....+++|+.++.++.++++..+ ..++|++||....-+...
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~------------- 153 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG------------- 153 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT-------------
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcc-------------
Confidence 35899999999765322 222344678899999999999888755 689999999665433321
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHH
Q 005949 155 PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEA 234 (668)
Q Consensus 155 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a 234 (668)
...|+.+|...+.+.++++.+ |++++.+.||.+.+++....... .. .+. .| ...+..++++++
T Consensus 154 -~~~YaAaka~l~~la~~~~~~-Gi~v~~I~pg~~~~~g~~~~~~~----~~-~~~-------~G---~~~~~~~~~~~~ 216 (259)
T d2fr1a1 154 -LGGYAPGNAYLDGLAQQRRSD-GLPATAVAWGTWAGSGMAEGPVA----DR-FRR-------HG---VIEMPPETACRA 216 (259)
T ss_dssp -CTTTHHHHHHHHHHHHHHHHT-TCCCEEEEECCBC-----------------CTT-------TT---EECBCHHHHHHH
T ss_pred -cHHHHHHHHhHHHHHHHHHhC-CCCEEECCCCcccCCccccchHH----HH-HHh-------cC---CCCCCHHHHHHH
Confidence 345999999999999887654 89999999999988765322111 11 010 01 134678999999
Q ss_pred HHHHHhcCCCC
Q 005949 235 FECILHKGEVG 245 (668)
Q Consensus 235 i~~~~~~~~~~ 245 (668)
+..++..+...
T Consensus 217 l~~~l~~~~~~ 227 (259)
T d2fr1a1 217 LQNALDRAEVC 227 (259)
T ss_dssp HHHHHHTTCSS
T ss_pred HHHHHhCCCce
Confidence 99999876544
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.61 E-value=4.5e-15 Score=139.66 Aligned_cols=200 Identities=16% Similarity=0.110 Sum_probs=142.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCC-----CEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPE-----YKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~-----~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
+.||||||++.||+++++.|+++|+. ..|++.+|... .++.+.. .....++..+.+|++|.+.+.++++.
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~--~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~ 79 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA--DLEKISLECRAEGALTDTITADISDMADVRRLTTHI 79 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH--HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 35899999999999999999999643 23777777532 2222211 11234678899999999998877632
Q ss_pred ----CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCC
Q 005949 79 ----ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVG 146 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~ 146 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+.+..
T Consensus 80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~------ 152 (240)
T d2bd0a1 80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR------ 152 (240)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCC------
Confidence 3799999999976532 2344566789999999999887664 323 46999999977654332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceE
Q 005949 147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 147 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+.... . .. ....
T Consensus 153 --------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~--~----------------~~--~~~~ 204 (240)
T d2bd0a1 153 --------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK--V----------------DD--EMQA 204 (240)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC--C----------------CS--TTGG
T ss_pred --------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh--c----------------CH--hhHh
Confidence 1346999999999999987765 48999999999997764311 0 00 0111
Q ss_pred eceeHHHHHHHHHHHHhcCC
Q 005949 224 SYLYCEDVAEAFECILHKGE 243 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~~ 243 (668)
.+...+|+|++++.++..+.
T Consensus 205 ~~~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 205 LMMMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp GSBCHHHHHHHHHHHHTSCT
T ss_pred cCCCHHHHHHHHHHHHcCCc
Confidence 24567999999999887654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.61 E-value=5.5e-15 Score=142.34 Aligned_cols=227 Identities=13% Similarity=0.076 Sum_probs=154.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC----C-cCCCCeEEEEccCCCHHHHHHHhcc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP----S-KASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
.++|++|||||++.||+++++.|+++ +++|++.+|... .++.... . ....++..+.+|++|++.+.++++.
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~--~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNED--RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 77 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHH
Confidence 46899999999999999999999999 789999998642 2221111 1 1123688999999999988877642
Q ss_pred -----CCCCEEEEcCccCCcc------cccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcC
Q 005949 79 -----ESIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 79 -----~~~d~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
.++|++||+||..... .+.+++...+++|+.++..+.+++... ..-.+++++||...+....
T Consensus 78 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~---- 153 (274)
T d1xhla_ 78 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS---- 153 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT----
T ss_pred HHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC----
Confidence 3799999999964321 122346678899999999888766532 2246777777755433221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCC---C-ChHHHHHHHHH-cCCCceee
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---E-KLIPKFILLAM-RGLPLPIH 216 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~---~-~~~~~~~~~~~-~~~~~~~~ 216 (668)
....|+.+|...+.+.+..+.+ +|+++..+.||.|-.|.... . .....+..... ....+++
T Consensus 154 ----------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl- 222 (274)
T d1xhla_ 154 ----------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV- 222 (274)
T ss_dssp ----------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-
T ss_pred ----------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-
Confidence 1346999999999999987765 38999999999997663210 0 01111111111 1122222
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhc---C-CCCceEEEcCCCc
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHK---G-EVGHVYNVGTKKE 255 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~---~-~~~~~~ni~~~~~ 255 (668)
.-+...+|+|.+++.++.. . -.|+.+.+.+|..
T Consensus 223 ------gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 223 ------GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp ------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred ------CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 1255789999999988842 2 3688899988764
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.60 E-value=1.9e-14 Score=136.93 Aligned_cols=217 Identities=13% Similarity=0.067 Sum_probs=141.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc------
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI------ 77 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 77 (668)
|++|+||||||++.||.++++.|+++|+.+.|++.+|... .++.+. .....++.++.+|++|.+++++++.
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~--~~~~l~-~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVE--KATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGG--GCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHH--HHHHHH-HhhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 5568999999999999999999999987789998888642 233322 2234579999999999988877653
Q ss_pred -cCCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHH----cC----------CCcEEEEEcCccccC
Q 005949 78 -TESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKV----TG----------QIRRFIHVSTDEVYG 137 (668)
Q Consensus 78 -~~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~----------~~~~~v~~SS~~vyg 137 (668)
..++|++||+||..... ...++....+++|+.|+..+.+.+.. .+ ...+++.+||...+-
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 13599999999975421 11223457889999999988876532 10 124677777754432
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCce
Q 005949 138 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLP 214 (668)
Q Consensus 138 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 214 (668)
..... .....+...|+.||.+...+.+.++.+ .++++..+.||.|-.+... .
T Consensus 158 ~~~~~-------~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~---------------~--- 212 (250)
T d1yo6a1 158 TDNTS-------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG---------------K--- 212 (250)
T ss_dssp TTCCS-------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred cCCcc-------cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC---------------C---
Confidence 22111 111223446999999999999998765 3899999999987644210 0
Q ss_pred eecCCCceEeceeHHHHHHHHHHHHhcCC--CCceEEEcCCCcc
Q 005949 215 IHGDGSNVRSYLYCEDVAEAFECILHKGE--VGHVYNVGTKKER 256 (668)
Q Consensus 215 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~--~~~~~ni~~~~~~ 256 (668)
...+..++.++.++..+.... ..+.|...++.++
T Consensus 213 --------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~ 248 (250)
T d1yo6a1 213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp --------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred --------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence 011356778888887776533 2234444445543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.60 E-value=8.5e-15 Score=140.94 Aligned_cols=228 Identities=14% Similarity=0.125 Sum_probs=152.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC----CC-cCCCCeEEEEccCCCHHHHHHHhc
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI----PS-KASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
..++|++|||||++.||+++++.|+++ +++|++.+|... .++... .. ....++..+.+|++|++.+.++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 77 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSE--RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN 77 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHH
Confidence 357899999999999999999999999 789999998642 222111 11 112358899999999999887764
Q ss_pred c-----CCCCEEEEcCccCCccc--------ccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcC-ccccCCCC
Q 005949 78 T-----ESIDTIMHFAAQTHVDN--------SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVST-DEVYGETD 140 (668)
Q Consensus 78 ~-----~~~d~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS-~~vyg~~~ 140 (668)
. .++|++||+||...... ..+++...+++|+.++..+.+++... + -..+|+++| .+......
T Consensus 78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~~~ 156 (272)
T d1xkqa_ 78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQP 156 (272)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSCCC
T ss_pred HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccCCC
Confidence 2 47999999999754221 11135677899999998888765432 1 245565555 33322211
Q ss_pred CCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCC----CCChHHHHHHHHH-cCCC
Q 005949 141 EDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQF----PEKLIPKFILLAM-RGLP 212 (668)
Q Consensus 141 ~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~-~~~~ 212 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+... +............ ....
T Consensus 157 --------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (272)
T d1xkqa_ 157 --------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC 222 (272)
T ss_dssp --------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT
T ss_pred --------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcC
Confidence 1346999999999999998765 4899999999998765321 0011111111111 1122
Q ss_pred ceeecCCCceEeceeHHHHHHHHHHHHhc---C-CCCceEEEcCCCcc
Q 005949 213 LPIHGDGSNVRSYLYCEDVAEAFECILHK---G-EVGHVYNVGTKKER 256 (668)
Q Consensus 213 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~---~-~~~~~~ni~~~~~~ 256 (668)
+++ .-+...+|+|.+++.++.. . -.|+.+.+.+|..+
T Consensus 223 ~Pl-------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 223 IPI-------GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp CTT-------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CCC-------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 222 1256789999999988842 2 36889999887654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.58 E-value=8.6e-15 Score=141.11 Aligned_cols=221 Identities=19% Similarity=0.155 Sum_probs=150.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLIT----- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----- 78 (668)
+++|++|||||++.||+++++.|+++ +++|++.+|... .+..+..+ ...++..+.+|+++.+.+.+++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~--~l~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAE--RLAELETD-HGDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHH-HGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHH-cCCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 46799999999999999999999999 789999998642 22222111 134688999999999988777632
Q ss_pred CCCCEEEEcCccCCccc-----ccC----ChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCC
Q 005949 79 ESIDTIMHFAAQTHVDN-----SFG----NSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~-----~~~----~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.++|++||+||...... ..+ ++...+++|+.++..+.+++. +.+ .++|++||...+-+..
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~----- 150 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNG----- 150 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTS-----
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCC-----
Confidence 47999999999643211 111 256788999999888887653 333 6888888865433221
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCEEEEeeCceeCCCCCCC------C--hHHHHHHHHHcCCCcee
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPE------K--LIPKFILLAMRGLPLPI 215 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~------~--~~~~~~~~~~~~~~~~~ 215 (668)
....|+.+|...+.+.+.++.+. ++++..+.||.|-.+...+. . .-..+.......-++.
T Consensus 151 ---------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg- 220 (276)
T d1bdba_ 151 ---------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG- 220 (276)
T ss_dssp ---------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS-
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC-
Confidence 13469999999999999887654 58999999999876542111 0 0011222222221111
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhc---C-CCCceEEEcCCC
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHK---G-EVGHVYNVGTKK 254 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~---~-~~~~~~ni~~~~ 254 (668)
-+...+|+|.+++.++.. . -.|+.+++.+|-
T Consensus 221 --------R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 221 --------RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp --------SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred --------CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 244678999999877632 2 358889998774
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=3.6e-15 Score=140.31 Aligned_cols=199 Identities=13% Similarity=-0.001 Sum_probs=143.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhc----
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLI---- 77 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~---- 77 (668)
..+|.+|||||++.||+++++.|+++ |++|++.+|... .++.+.. .....++..+.+|++|.+.+.++++
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~--~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKH--GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999 789999999642 2222211 1224578999999999999887763
Q ss_pred -cCCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCC
Q 005949 78 -TESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNH 148 (668)
Q Consensus 78 -~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~ 148 (668)
..++|++||+||...... ..+.+...+++|+.|+.++.+++- +.+ -.++|++||...+.+...
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~------- 152 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPF------- 152 (244)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHH-------
T ss_pred HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCC-------
Confidence 246999999999765332 233345788999999988877543 333 579999999776433221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHh------cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 149 EASQLLPTNPYSATKAGAEMLVMAYGRS------YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 149 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
...|+.+|.+.+.+.+.++.+ .|+.+..+.||.|-.+.... .. .. .
T Consensus 153 -------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~--~~------------~~-------~ 204 (244)
T d1yb1a_ 153 -------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PS------------TS-------L 204 (244)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--TH------------HH-------H
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC--cC------------cc-------c
Confidence 246999999999999998764 37999999999886553211 00 00 0
Q ss_pred EeceeHHHHHHHHHHHHhcC
Q 005949 223 RSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~ 242 (668)
...+..+|+++.+...+..+
T Consensus 205 ~~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 205 GPTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp CCCCCHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 12346789999988877654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.57 E-value=1.9e-14 Score=137.54 Aligned_cols=225 Identities=17% Similarity=0.085 Sum_probs=151.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
..+|+||||||++.||.++++.|+++ +++|++..+.... ..+.... .....++..+.+|++|.+.+...+..
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~-~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSK-AAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChH-HHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999 7888876554321 1111111 11234788999999999888776632
Q ss_pred --CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCc-cccCCCCCCcCCCCCCC
Q 005949 79 --ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTD-EVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 --~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~-~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+||..... ...+++...+.+|+.+...+++.+..+ ..-.+.+.++|. +.+.+..
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~---------- 150 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------- 150 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----------
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC----------
Confidence 4799999999976532 233445678899999998888776542 112466666653 3332211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC-----------CCCCChHHHHHHHHHcCCCceee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN-----------QFPEKLIPKFILLAMRGLPLPIH 216 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 216 (668)
....|+.+|...+.+.+.++.+ +++++..+.||.+-.+. .........+.....+..++
T Consensus 151 ----~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--- 223 (259)
T d1ja9a_ 151 ----NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL--- 223 (259)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT---
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC---
Confidence 1346999999999999998765 38999999999986431 01111222333333333322
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
..+...+|+++++..++.... .|+.+.+.+|.
T Consensus 224 ------~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 224 ------KRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp ------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 135678999999999886543 57788887664
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.56 E-value=8.6e-14 Score=134.07 Aligned_cols=227 Identities=14% Similarity=0.073 Sum_probs=153.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc--
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT-- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 78 (668)
++++|++|||||++.||+++++.|+++ |++|++.++.... .++.... .....++..+.+|++|++.+.+.++.
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~-~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTE-SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchH-HHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 367899999999999999999999999 7889888775321 1111111 12244688999999999998877642
Q ss_pred ---CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ---ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ---~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
.++|++||+++..... ...+++...+++|+.++..+.+++... ..-.+.++++|.......
T Consensus 92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~----------- 160 (272)
T d1g0oa_ 92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------- 160 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-----------
T ss_pred HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc-----------
Confidence 4799999999976532 233445678899999999999877642 223577888775432111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCC----------CCCChHHHHHHH-HHcCCCceee
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQ----------FPEKLIPKFILL-AMRGLPLPIH 216 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~----------~~~~~~~~~~~~-~~~~~~~~~~ 216 (668)
......|+.+|...+.+.+.++.+ +|+++..+.||.|-.+.. .....-....+. ....-++
T Consensus 161 --~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl--- 235 (272)
T d1g0oa_ 161 --VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL--- 235 (272)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---
T ss_pred --ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---
Confidence 112346999999999999988765 489999999999865411 000011111111 1111111
Q ss_pred cCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 217 GDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 217 ~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
.-+...+|+|.++..++.... .|+.+.+.+|.
T Consensus 236 ------gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 236 ------RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp ------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ------CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 135688999999999886432 57788888774
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.53 E-value=1.9e-14 Score=134.99 Aligned_cols=192 Identities=11% Similarity=0.079 Sum_probs=135.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCCcc-------------cccccccCChhHHHHHhhhc-----CCCEEEEcccccC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGIPF-------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG 443 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~~v-------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~ 443 (668)
+.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++||+||...
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~ 85 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA 85 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccc
Confidence 34689999999999999999999999976 34678999999888777665 6999999999772
Q ss_pred CCC-ccccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 444 RPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 444 ~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
... .+...++....+++|+.++..+.+++.. .+. ++|++||...+.+ .+....|+.
T Consensus 86 ~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~------------------~~~~~~Y~a 147 (237)
T d1uzma1 86 DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG------------------IGNQANYAA 147 (237)
T ss_dssp -----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------------CCHHHHH
T ss_pred cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC------------------CcccHHHHH
Confidence 111 1223455667899999999988876643 343 7888888765422 122357999
Q ss_pred hHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc---
Q 005949 518 TKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN--- 585 (668)
Q Consensus 518 sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~--- 585 (668)
||...+.+.+.+. ...++++..+.|+.+.-+.. ........- . -.-+...+|+|+++.+++...
T Consensus 148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~---p-l~R~~~pedvA~~v~fL~S~~s~~ 223 (237)
T d1uzma1 148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFI---P-AKRVGTPAEVAGVVSFLASEDASY 223 (237)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGC---T-TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCchhcC
Confidence 9999999887753 23689999999998876631 111111110 1 123456899999999998543
Q ss_pred -CCceeeecCC
Q 005949 586 -LRGIWNFTNP 595 (668)
Q Consensus 586 -~~g~~ni~~~ 595 (668)
.+.++.+.+|
T Consensus 224 itG~~i~vdGG 234 (237)
T d1uzma1 224 ISGAVIPVDGG 234 (237)
T ss_dssp CCSCEEEESTT
T ss_pred CcCCeEEECCC
Confidence 4557777665
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.52 E-value=1.1e-13 Score=135.13 Aligned_cols=227 Identities=14% Similarity=0.132 Sum_probs=149.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC--CccccCCCcCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS--NLKNLIPSKASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
..++|++|||||+|.||++++++|+++ |.+|++.+|..... ..+.+. ......+..+.+|++|.+.+.+++.
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~-~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQIS-SQTGNKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH-HHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHH-HhcCCceEEEEecccChHHHHHHhhhhh
Confidence 346799999999999999999999999 78999999864210 011111 1123467899999999999877653
Q ss_pred --cCCCCEEEEcCccCCcccc----cCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 78 --TESIDTIMHFAAQTHVDNS----FGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 78 --~~~~d~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
..++|++||+||....... ..+....+..|..+...+...+. .......++.+||........
T Consensus 99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~------- 171 (294)
T d1w6ua_ 99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG------- 171 (294)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT-------
T ss_pred hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc-------
Confidence 2479999999997653322 22344567778777666654332 223345677777754432221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC-ChHHHHHHHHHcCCCceeecCCCceE
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMRGLPLPIHGDGSNVR 223 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+..... .............-++.
T Consensus 172 -------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~--------- 235 (294)
T d1w6ua_ 172 -------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG--------- 235 (294)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------
T ss_pred -------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------
Confidence 1346999999999999998765 489999999999987643110 01112223333322221
Q ss_pred eceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 224 SYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 224 ~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
.+...+|+|.++..++... -.|+++.+.+|..
T Consensus 236 R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 236 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE 270 (294)
T ss_dssp SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence 2457899999999988643 2578899988864
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.51 E-value=9.3e-14 Score=132.86 Aligned_cols=215 Identities=15% Similarity=0.100 Sum_probs=144.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHh-CCCCEEEEEcCCCccCCccccCC----CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRN-YPEYKIVVLDKLDYCSNLKNLIP----SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~-g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
.+++|.++||||++.||.++++.|.+. ..+++|++.+|... .++.+.. .....++..+.+|++|++.+.+++.
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~--~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~ 80 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES--MLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH--HHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHH--HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence 467889999999999999999999863 23789999998642 2222211 1223468899999999998877752
Q ss_pred c---------CCCCEEEEcCccCCc-------ccccCChHHHHHHHHHHHHHHHHHHHHc----C-CCcEEEEEcCcccc
Q 005949 78 T---------ESIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACKVT----G-QIRRFIHVSTDEVY 136 (668)
Q Consensus 78 ~---------~~~d~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~v~~SS~~vy 136 (668)
. ..+|++||+||.... ....+++...+++|+.++..+.+++... + ...++|++||...+
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 1 246799999986431 1122345578899999999999877643 1 13589999997664
Q ss_pred CCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-cCCCEEEEeeCceeCCCCCC---CChHHHHHHHHHcCCC
Q 005949 137 GETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQFP---EKLIPKFILLAMRGLP 212 (668)
Q Consensus 137 g~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~ 212 (668)
.+.. ....|+.+|...+.+.+.++.+ +++++..+.||.|-.+.... ...-+..........
T Consensus 161 ~~~~--------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~- 225 (259)
T d1oaaa_ 161 QPYK--------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK- 225 (259)
T ss_dssp SCCT--------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH-
T ss_pred CCCc--------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC-
Confidence 3322 2356999999999999998765 48999999999887652100 000001111111000
Q ss_pred ceeecCCCceEeceeHHHHHHHHHHHHhcC
Q 005949 213 LPIHGDGSNVRSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 213 ~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~ 242 (668)
.. ..+...+|+|++++.+++..
T Consensus 226 ----~~----~r~~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 226 ----SD----GALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp ----HT----TCSBCHHHHHHHHHHHHHHC
T ss_pred ----CC----CCCCCHHHHHHHHHHHhhhc
Confidence 00 02357889999999888754
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=5.9e-14 Score=136.46 Aligned_cols=213 Identities=17% Similarity=0.096 Sum_probs=143.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC------CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP------SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
+++|++|||||++.||+++++.|+++ |++|++.++............ .........+.+|+.|.+..++++.
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 82 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 82 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence 36899999999999999999999999 789999887643211111000 0001133456788888776655442
Q ss_pred ----c-CCCCEEEEcCccCCcc----cccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcC
Q 005949 78 ----T-ESIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 ----~-~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
+ .++|++||+||..... .+.+++...+++|+.++..+.+++. +.+ -.++|++||...+.+..
T Consensus 83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~---- 157 (302)
T d1gz6a_ 83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF---- 157 (302)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCC----
Confidence 2 3799999999976532 2344566889999999999887654 333 47999999976543222
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.+-.+.. ..++. .
T Consensus 158 ----------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~---~~~~~------------------~ 206 (302)
T d1gz6a_ 158 ----------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE---TVMPE------------------D 206 (302)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG---GGSCH------------------H
T ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh---hcCcH------------------h
Confidence 1346999999999999998765 489999999997633221 11100 0
Q ss_pred eEeceeHHHHHHHHHHHHhcC--CCCceEEEcCCC
Q 005949 222 VRSYLYCEDVAEAFECILHKG--EVGHVYNVGTKK 254 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~--~~~~~~ni~~~~ 254 (668)
...++..+|+|.+++.++... ..|+++.+.+|.
T Consensus 207 ~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG~ 241 (302)
T d1gz6a_ 207 LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGW 241 (302)
T ss_dssp HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred hHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCCc
Confidence 112234578999999887532 246777777653
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=8.6e-14 Score=134.55 Aligned_cols=224 Identities=17% Similarity=0.087 Sum_probs=143.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCC-EEEEEcCCCccC-CccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc---
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEY-KIVVLDKLDYCS-NLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT--- 78 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~-~v~~~~r~~~~~-~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 78 (668)
+|.||||||++.||+++++.|+++|..+ .|....|..... .+..... .....++..+.+|++|.+.+.+++..
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 3567899999999999999999996443 333333322111 1111100 12244789999999999999888743
Q ss_pred CCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHH----HHcCCCcEEEEEcCccccCCCCCCcCCCCCCC
Q 005949 79 ESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDAVVGNHEA 150 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~ 150 (668)
..+|+++|+||...... +.+++...+++|+.|+.++.+++ ++.+ -.++|++||.....+..
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~---------- 150 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP---------- 150 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT----------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCC----------
Confidence 46999999999765332 33445678899999988888765 3334 47999999976543322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCC--C-----------hHHHHHHHHHcCCCce
Q 005949 151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPE--K-----------LIPKFILLAMRGLPLP 214 (668)
Q Consensus 151 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~--~-----------~~~~~~~~~~~~~~~~ 214 (668)
....|+.+|...+.+.+.++.+ +|+++.++.||.|-.+..... . ....+.+.....+...
T Consensus 151 ----~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (285)
T d1jtva_ 151 ----FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF 226 (285)
T ss_dssp ----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh
Confidence 1346999999999999988765 489999999999876532100 0 0001111111111111
Q ss_pred eecCCCceEeceeHHHHHHHHHHHHhcCCCCceEEEc
Q 005949 215 IHGDGSNVRSYLYCEDVAEAFECILHKGEVGHVYNVG 251 (668)
Q Consensus 215 ~~~~~~~~~~~i~v~D~a~ai~~~~~~~~~~~~~ni~ 251 (668)
. ......+|+|++++.+++.+.+.-.|..+
T Consensus 227 ~-------~~~~~PeeVA~~v~~~~~~~~p~~ry~~g 256 (285)
T d1jtva_ 227 R-------EAAQNPEEVAEVFLTALRAPKPTLRYFTT 256 (285)
T ss_dssp H-------HHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred c-------ccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence 0 12346789999999999877554344433
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=3.9e-13 Score=126.32 Aligned_cols=201 Identities=15% Similarity=0.146 Sum_probs=136.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHH-------hc
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFL-------LI 77 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-------~~ 77 (668)
++|+||||||+|.||+++++.|+++ +++|+++++..... ......+..|..+.+..+.. +.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLG 68 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999 78999888754211 11223445555555443322 22
Q ss_pred cCCCCEEEEcCccCCcc-----cccCChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCC
Q 005949 78 TESIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEAS 151 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~ 151 (668)
..++|++||+||..... ...+++...++.|+.++.++.+++... ..-.++|++||...+.+...
T Consensus 69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~---------- 138 (236)
T d1dhra_ 69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG---------- 138 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC----------
Confidence 34689999999953321 122334567899999999888776542 22368999999776543321
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEece
Q 005949 152 QLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYL 226 (668)
Q Consensus 152 ~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 226 (668)
...|+.+|...+.+.+.++.+ .++++..+.||.+..|. .+...... ..-.++
T Consensus 139 ----~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~----------~~~~~~~~---------~~~~~~ 195 (236)
T d1dhra_ 139 ----MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------NRKSMPEA---------DFSSWT 195 (236)
T ss_dssp ----BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH----------HHHHSTTS---------CGGGSE
T ss_pred ----CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc----------chhhCccc---------hhhcCC
Confidence 346999999999999998764 37999999999987642 22221111 112367
Q ss_pred eHHHHHHHHHHHHhcC---CCCceEEE
Q 005949 227 YCEDVAEAFECILHKG---EVGHVYNV 250 (668)
Q Consensus 227 ~v~D~a~ai~~~~~~~---~~~~~~ni 250 (668)
..+++++.+..++... ..|+.+.+
T Consensus 196 ~pe~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 196 PLEFLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp EHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred CHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence 7899999999888653 24555544
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.50 E-value=5.5e-14 Score=133.50 Aligned_cols=215 Identities=13% Similarity=0.083 Sum_probs=145.2
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc----c-CCCC
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI----T-ESID 82 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~-~~~d 82 (668)
++|||||++.||+.+++.|+++ +++|++.+|... .+..+.. .......+|+.|.+++.++++ + .++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~--~~~~~~~----~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFK--QKDELEA----FAETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGG--SHHHHHH----HHHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHh----hhCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 7899999999999999999999 689999888532 1111111 011233567777655554442 2 4799
Q ss_pred EEEEcCccCCc-----ccccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 83 TIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 83 ~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++||+||.... ..+.+++...+++|+.++..+.+++. +.+ -.++|++||...+....
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~------------- 139 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK------------- 139 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT-------------
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccc-------------
Confidence 99999986432 12334466788999999888887653 333 47999999977654432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCC------hHHHHHHHHHcCCCceeecCCCceEe
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEK------LIPKFILLAMRGLPLPIHGDGSNVRS 224 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (668)
....|+.+|...+.+.+.++.++ ++++..+.||.|-.+...... ..+.......+.-++. -
T Consensus 140 -~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R 209 (252)
T d1zmta1 140 -ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------R 209 (252)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------S
T ss_pred -cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------C
Confidence 13469999999999999987653 899999999999876542110 1112222222222211 2
Q ss_pred ceeHHHHHHHHHHHHhcCC---CCceEEEcCCC
Q 005949 225 YLYCEDVAEAFECILHKGE---VGHVYNVGTKK 254 (668)
Q Consensus 225 ~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~ 254 (668)
+...+|+|.+++.++.... .|+.+.+.+|-
T Consensus 210 ~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~ 242 (252)
T d1zmta1 210 LGTQKELGELVAFLASGSCDYLTGQVFWLAGGF 242 (252)
T ss_dssp CBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCchhcCCcCCeEEECCCc
Confidence 4578999999999886543 57889998775
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.50 E-value=1.3e-13 Score=130.83 Aligned_cols=175 Identities=14% Similarity=0.093 Sum_probs=123.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHh-CCCCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHhc------
Q 005949 6 PKNILITGAAGFIASHVCNRLIRN-YPEYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLLI------ 77 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~-g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------ 77 (668)
||+||||||++.||.++++.|++. ..+++|++.+|... .++.+.. .....++.++.+|++|.+++.++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE--QAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT--SCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHH--HHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 579999999999999999999863 23789999988653 2222211 1124579999999999988876653
Q ss_pred -cCCCCEEEEcCccCCccc-----ccCChHHHHHHHHHHHHHHHHHHHHc--------------CCCcEEEEEcCccccC
Q 005949 78 -TESIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT--------------GQIRRFIHVSTDEVYG 137 (668)
Q Consensus 78 -~~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--------------~~~~~~v~~SS~~vyg 137 (668)
..++|++||+||...... ..++....+++|+.|+..+.+++... ....++|.+||....-
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 246999999999754321 22234568899999998887765321 0136899999864321
Q ss_pred CCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCC
Q 005949 138 ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPN 193 (668)
Q Consensus 138 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~ 193 (668)
... +......|+.||.+...+.+.++.+ .++++..+.||.|-.+.
T Consensus 160 ~~~-----------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 160 QGN-----------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp TTC-----------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred CCC-----------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 110 1112347999999999999887654 38999999999987664
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=1.6e-13 Score=129.06 Aligned_cols=192 Identities=15% Similarity=0.067 Sum_probs=134.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------cccccccCChhHHHHHhhhc-----CCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a 439 (668)
++++||||++-||+.+++.|+++|++| ..+.+|++|+++++++++.. ++|++||+|
T Consensus 6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA 85 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYA 85 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECC
Confidence 579999999999999999999999865 45678999999988887765 699999999
Q ss_pred cccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 440 GVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 440 ~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
|...... .+...++....+++|+.++..+.+++... +...++++|+.... +.+....
T Consensus 86 G~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------------~~~~~~~ 147 (242)
T d1ulsa_ 86 GITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------------GNLGQAN 147 (242)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------------CCTTCHH
T ss_pred cccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------------CCCCCcc
Confidence 9772111 12334556678899999999999988653 33344444443221 1122367
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|+.||...+.+.+.+. ..+++|+..+.|+.+.-+. .+...+...-+ -.-+...+|+|+++.+++...
T Consensus 148 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~p----l~R~~~pedia~~v~fL~S~~ 223 (242)
T d1ulsa_ 148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATP----LGRAGKPLEVAYAALFLLSDE 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCT----TCSCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCC----CCCCCCHHHHHHHHHHHhchh
Confidence 9999999999887753 2368999999998876553 22222221111 112445889999999998543
Q ss_pred ----CCceeeecCCCc
Q 005949 586 ----LRGIWNFTNPGV 597 (668)
Q Consensus 586 ----~~g~~ni~~~~~ 597 (668)
.+.++.+.+|..
T Consensus 224 s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 224 SSFITGQVLFVDGGRT 239 (242)
T ss_dssp GTTCCSCEEEESTTTT
T ss_pred hCCCCCcEEEECCCcc
Confidence 456777777654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=4.5e-14 Score=133.35 Aligned_cols=196 Identities=13% Similarity=0.107 Sum_probs=138.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc-----CCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~ 440 (668)
++++||||++-||+++++.|+++|++| ..+++|++|+++++++++.+ ++|++||.||
T Consensus 6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG 85 (248)
T d2d1ya1 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAA 85 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCc
Confidence 579999999999999999999999965 34678999999888877765 7999999999
Q ss_pred ccCCCC-ccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 441 VTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 441 ~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
...... .+...++....+++|+.++.++.+++..+ + .++|++||...+.+ .+....
T Consensus 86 ~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~------------------~~~~~~ 147 (248)
T d2d1ya1 86 IAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA------------------EQENAA 147 (248)
T ss_dssp CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB------------------CTTBHH
T ss_pred CCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc------------------ccccch
Confidence 772111 12233455678899999999999988543 3 37888888764421 123367
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhccccee---------ecC-CCcccHhhHHHHHHHH
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVV---------NIP-NSMTVLDELLPISIEM 581 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~---------~~~-~~~~~v~D~a~~~~~~ 581 (668)
|+.+|...+.+.+.+. ..+++|+..+.|+.+-.|.. .......... ..+ .-+...+|+|+++.++
T Consensus 148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~--~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL 225 (248)
T d2d1ya1 148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL 225 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchH--HHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999887753 23689999999988876531 1111110000 001 1344689999999999
Q ss_pred Hhcc----CCceeeecCCCccC
Q 005949 582 AKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 582 ~~~~----~~g~~ni~~~~~~s 599 (668)
+... .+.++++.+|-..|
T Consensus 226 ~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 226 ASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp HSGGGTTCCSCEEEESTTGGGB
T ss_pred hCchhcCCCCcEEEcCcCcccc
Confidence 8543 45578887765433
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=5.7e-13 Score=126.54 Aligned_cols=218 Identities=19% Similarity=0.183 Sum_probs=145.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc-----
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI----- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 77 (668)
+.++|.+|||||++.||.+++++|+++ |++|++.+|... .++.... ...........|+.+.+.+++...
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~--~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNS--GGEAQAK-KLGNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTS--SHHHHHH-HHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChH--HHHHHHH-HhCCCcccccccccccccccccccccccc
Confidence 457899999999999999999999999 788999998642 2222111 123467888999999877655442
Q ss_pred cCCCCEEEEcCccCCcc----------cccCChHHHHHHHHHHHHHHHHHHHHc---------CCCcEEEEEcCccccCC
Q 005949 78 TESIDTIMHFAAQTHVD----------NSFGNSFEFTKNNIYGTHVLLEACKVT---------GQIRRFIHVSTDEVYGE 138 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~vyg~ 138 (668)
....|.+++.++..... ...+++...+++|+.++.++.+++... ..-.++|++||...+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence 24688888887653311 112345578899999999999887442 11348999999776533
Q ss_pred CCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCcee
Q 005949 139 TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPI 215 (668)
Q Consensus 139 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 215 (668)
.. ....|+.+|...+.+.+.++.++ ++++..+.||.+..+... .+.........+..+ +
T Consensus 157 ~~--------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~--~~~~~~~~~~~~~~p--l 218 (248)
T d2o23a1 157 QV--------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT--SLPEKVCNFLASQVP--F 218 (248)
T ss_dssp CT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCS--S
T ss_pred CC--------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh--cCCHHHHHHHHhcCC--C
Confidence 22 23469999999999999987654 899999999998776432 111122222222211 1
Q ss_pred ecCCCceEeceeHHHHHHHHHHHHhcCC-CCceEE
Q 005949 216 HGDGSNVRSYLYCEDVAEAFECILHKGE-VGHVYN 249 (668)
Q Consensus 216 ~~~~~~~~~~i~v~D~a~ai~~~~~~~~-~~~~~n 249 (668)
. ..+...+|+|++++.+++..- .|++.+
T Consensus 219 ~------~R~g~peevA~~v~fL~s~~~itGq~I~ 247 (248)
T d2o23a1 219 P------SRLGDPAEYAHLVQAIIENPFLNGEVIR 247 (248)
T ss_dssp S------CSCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred C------CCCcCHHHHHHHHHHHHhCCCCCceEeE
Confidence 0 125578999999998887542 344443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=7.9e-14 Score=132.32 Aligned_cols=191 Identities=14% Similarity=0.107 Sum_probs=137.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|+
T Consensus 12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDi 91 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999854 45679999999888877654 7999
Q ss_pred EEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 435 Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
+||+||.......+...++....+++|+.++.++.+++..+ +..+|++||...+. +.
T Consensus 92 lvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~------------------~~ 153 (255)
T d1fmca_ 92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------------KN 153 (255)
T ss_dssp EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------------------CC
T ss_pred eeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc------------------cc
Confidence 99999987332233345566678899999999999877542 33677777765431 11
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh-------hHHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR-------NFITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
+....|+.||...+.+.+.+.. .+++|+..+-|+.+..+. .....+...-+ -.-+...+|+|++++
T Consensus 154 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~p----l~R~g~pedvA~~v~ 229 (255)
T d1fmca_ 154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP----IRRLGQPQDIANAAL 229 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS----SCSCBCHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCC----CCCCcCHHHHHHHHH
Confidence 2346899999999998887642 368999999998876653 11112221110 112445799999999
Q ss_pred HHHhcc----CCceeeecCCC
Q 005949 580 EMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~~ 596 (668)
+++... .+.++.+.+|.
T Consensus 230 fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 230 FLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCchhcCCcCCEEEECcCc
Confidence 998643 45577777764
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.48 E-value=1.4e-13 Score=129.40 Aligned_cols=191 Identities=14% Similarity=0.075 Sum_probs=137.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
+.++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++||
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilin 86 (244)
T d1nffa_ 7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVN 86 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence 579999999999999999999999864 45678999999888777665 6999999
Q ss_pred cccccCCC-CccccccccccceehhhhhhHHHHHHHHH----c-CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----H-GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||..... ..+...++....+++|+.++.++.+++.. . +.++|++||...+.+ .+.
T Consensus 87 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~------------------~~~ 148 (244)
T d1nffa_ 87 NAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG------------------TVA 148 (244)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------------CTT
T ss_pred CCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc------------------ccc
Confidence 99977211 11223445567889999999999987643 2 347889988764311 122
Q ss_pred CCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecC-CCcccHhhHHHHHHHHHhcc--
Q 005949 512 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIP-NSMTVLDELLPISIEMAKRN-- 585 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~v~D~a~~~~~~~~~~-- 585 (668)
...|+.+|...+.+.+.+. ..+++|+..+-|+.+..|.. ..+... ....+ .-+...+|+|+++++++...
T Consensus 149 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~--~~~~~~--~~~~pl~R~~~p~diA~~v~fL~s~~s~ 224 (244)
T d1nffa_ 149 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT--DWVPED--IFQTALGRAAEPVEVSNLVVYLASDESS 224 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG--TTSCTT--CSCCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhH--hhhhHH--HHhccccCCCCHHHHHHHHHHHhChhhC
Confidence 3679999999999988764 24689999999988776531 111111 11111 13567899999999998543
Q ss_pred --CCceeeecCCC
Q 005949 586 --LRGIWNFTNPG 596 (668)
Q Consensus 586 --~~g~~ni~~~~ 596 (668)
.+.++.+.+|.
T Consensus 225 ~itG~~i~vDGG~ 237 (244)
T d1nffa_ 225 YSTGAEFVVDGGT 237 (244)
T ss_dssp TCCSCEEEESTTG
T ss_pred CCcCCEEEECCCe
Confidence 45578777664
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.47 E-value=1.4e-13 Score=129.40 Aligned_cols=190 Identities=13% Similarity=0.062 Sum_probs=136.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~ 442 (668)
++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++||+||..
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~ 85 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV 85 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccc
Confidence 589999999999999999999999865 45678999999999999987 789999999977
Q ss_pred CCCC-ccccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 443 GRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 443 ~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
.... .+...++....+++|+.++..+.+++.. . +..+|++||...+. +.+....|
T Consensus 86 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------------~~~~~~~Y 147 (242)
T d1cyda_ 86 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV------------------TFPNLITY 147 (242)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------CCTTBHHH
T ss_pred cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc------------------cCCccccc
Confidence 2111 1223445566788999999999887643 2 23677777764331 11223679
Q ss_pred hhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 516 SKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
+.+|...+.+.+.+. ..+++|+-.+-|+.+..+.. +...+.... . -.-+...+|+|+++.+++..
T Consensus 148 ~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---p-l~R~~~peeva~~v~fL~S~ 223 (242)
T d1cyda_ 148 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH---P-LRKFAEVEDVVNSILFLLSD 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS---T-TSSCBCHHHHHHHHHHHHSG
T ss_pred cchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCc
Confidence 999999999988863 24689999999988876531 111111111 1 11345689999999999854
Q ss_pred c----CCceeeecCC
Q 005949 585 N----LRGIWNFTNP 595 (668)
Q Consensus 585 ~----~~g~~ni~~~ 595 (668)
. .+.++.+.+|
T Consensus 224 ~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 224 RSASTSGGGILVDAG 238 (242)
T ss_dssp GGTTCCSSEEEESTT
T ss_pred hhcCcCCceEEeCcc
Confidence 3 4557777665
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=5.9e-14 Score=132.17 Aligned_cols=190 Identities=13% Similarity=0.054 Sum_probs=136.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
+.++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++||
T Consensus 5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 84 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVN 84 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehh
Confidence 479999999999999999999999965 45678999998888777754 6999999
Q ss_pred cccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
.||....... +...++....+++|+.++..+.+++.. .+ .++|++||...+.+ .+.
T Consensus 85 nAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~------------------~~~ 146 (243)
T d1q7ba_ 85 NAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG------------------NGG 146 (243)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------------CTT
T ss_pred hhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC------------------CCC
Confidence 9997732111 223445567789999999999998843 33 47889988764421 122
Q ss_pred CCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------HHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
...|+.||...+.+.+.+. ..+++|+..+.|+.+--+.. ....+...- . -.-+...+|+|.++.+++
T Consensus 147 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~---p-l~R~~~pedvA~~v~fL~ 222 (243)
T d1q7ba_ 147 QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQV---P-AGRLGGAQEIANAVAFLA 222 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTC---T-TSSCBCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcC---C-CCCCCCHHHHHHHHHHHh
Confidence 3679999999999888763 24689999999988765531 111111110 0 113456899999999998
Q ss_pred hcc----CCceeeecCC
Q 005949 583 KRN----LRGIWNFTNP 595 (668)
Q Consensus 583 ~~~----~~g~~ni~~~ 595 (668)
... .++++++.+|
T Consensus 223 S~~s~~itGq~i~vdGG 239 (243)
T d1q7ba_ 223 SDEAAYITGETLHVNGG 239 (243)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CchhcCCcCCeEEECCC
Confidence 643 4567777665
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.46 E-value=1e-13 Score=131.14 Aligned_cols=193 Identities=13% Similarity=0.041 Sum_probs=137.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++||
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 85 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN 85 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEe
Confidence 579999999999999999999999864 46779999999988887765 7999999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----c-CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----H-GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||...... .+...++....+++|+.++..+.+++.. . +.++|++||...+. +.+.
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~------------------~~~~ 147 (254)
T d1hdca_ 86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM------------------GLAL 147 (254)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------CCTT
T ss_pred cCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc------------------cccc
Confidence 999873111 1223445567789999999999998743 3 34889999876431 1123
Q ss_pred CCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc---eeecCC-Cc-ccHhhHHHHHHHHHh
Q 005949 512 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK---VVNIPN-SM-TVLDELLPISIEMAK 583 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---~~~~~~-~~-~~v~D~a~~~~~~~~ 583 (668)
...|+.||...+.+.+.+. ..+++|+..+-|+.+.-+. ......... ....+. -+ +..+|+|.++++++.
T Consensus 148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~--~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S 225 (254)
T d1hdca_ 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM--TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLS 225 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--HHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc--chhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhc
Confidence 3689999999999888864 2468999999998887653 222211110 000111 12 246899999999985
Q ss_pred cc----CCceeeecCCC
Q 005949 584 RN----LRGIWNFTNPG 596 (668)
Q Consensus 584 ~~----~~g~~ni~~~~ 596 (668)
.. .+.++.+.+|-
T Consensus 226 ~~a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 226 DTSSYVTGAELAVDGGW 242 (254)
T ss_dssp GGGTTCCSCEEEESTTT
T ss_pred hhhCCCCCceEEeCCCc
Confidence 43 46688887764
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.46 E-value=2.8e-13 Score=128.16 Aligned_cols=192 Identities=16% Similarity=0.106 Sum_probs=135.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+.++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 85 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 85 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999854 35678999999888877765 789
Q ss_pred EEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
++||+||.... |..+...++....+++|+.++..+.+++..+ + .++|+++|..... .
T Consensus 86 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~-----------------~ 148 (251)
T d1vl8a_ 86 TVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-----------------V 148 (251)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------------C
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc-----------------c
Confidence 99999997621 1112234555677889999999999987543 2 3788888754220 0
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELLP 576 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a~ 576 (668)
+.+....|+.+|...+.+.+.+. ..+++|+-.+-|+.+-.+.. ....+...- . -.-+...+|+|+
T Consensus 149 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---p-l~R~~~pedvA~ 224 (251)
T d1vl8a_ 149 TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI---P-LGRTGVPEDLKG 224 (251)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC---T-TSSCBCGGGGHH
T ss_pred cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcC---C-CCCCCCHHHHHH
Confidence 11223579999999999888763 23689999999988766531 111121111 0 112445899999
Q ss_pred HHHHHHhcc----CCceeeecCCC
Q 005949 577 ISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 577 ~~~~~~~~~----~~g~~ni~~~~ 596 (668)
++++++... .+.++.+-+|-
T Consensus 225 ~v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 225 VAVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCchhCCCcCcEEEeCcCe
Confidence 999988643 45577776653
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=3e-13 Score=127.48 Aligned_cols=190 Identities=13% Similarity=0.082 Sum_probs=135.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-CCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~ 442 (668)
++++||||++.||+++++.|+++|++| ..+..|++|+++++++++.+ ++|++||+||..
T Consensus 8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~ 87 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVA 87 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccc
Confidence 589999999999999999999999965 35678999999999999887 789999999977
Q ss_pred CCCC-ccccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcc
Q 005949 443 GRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFY 515 (668)
Q Consensus 443 ~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y 515 (668)
.... .+...++....+++|+.++..+.+++.. . +..++++||...+. +.+....|
T Consensus 88 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------------~~~~~~~Y 149 (244)
T d1pr9a_ 88 LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------------AVTNHSVY 149 (244)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------CCTTBHHH
T ss_pred cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc------------------cccchhhh
Confidence 2111 1223455567788999999998887643 1 23678888865431 11223579
Q ss_pred hhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--------hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhc
Q 005949 516 SKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 516 ~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~ 584 (668)
+.||...+.+.+.+. ...++|+..+.|+.+.-+. .....+...- . -.-+...+|+|+++.+++..
T Consensus 150 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~---p-l~R~~~peevA~~v~fL~S~ 225 (244)
T d1pr9a_ 150 CSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---P-LGKFAEVEHVVNAILFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTC---T-TCSCBCHHHHHHHHHHHHSG
T ss_pred hhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcC---C-CCCCcCHHHHHHHHHHHhCc
Confidence 999999999888763 2368999999998887653 1111111110 0 12355689999999998864
Q ss_pred c----CCceeeecCC
Q 005949 585 N----LRGIWNFTNP 595 (668)
Q Consensus 585 ~----~~g~~ni~~~ 595 (668)
. .+.++++.+|
T Consensus 226 ~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 226 RSGMTTGSTLPVEGG 240 (244)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhCCcCCcEEEECcc
Confidence 3 4557777654
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.46 E-value=2.1e-13 Score=129.15 Aligned_cols=193 Identities=13% Similarity=0.125 Sum_probs=135.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
.+.++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 85 (251)
T d1zk4a1 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence 3689999999999999999999999854 46778999999888877765 6899
Q ss_pred EEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc----C--CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH----G--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+||+||.... +..+...++....+++|+.++..+.+++..+ + ..+|++||...+.
T Consensus 86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~------------------ 147 (251)
T d1zk4a1 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------------------ 147 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------------------
T ss_pred EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec------------------
Confidence 9999998721 1112234455668899999999999987542 3 3567888765331
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc-----CeeEeEEeeeecCCCCChhhHHHHhhcccc----eeecC-CCcccHhhHHHH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISRYNK----VVNIP-NSMTVLDELLPI 577 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~~v~D~a~~ 577 (668)
+.+....|+.+|...+.+.+.+. ..+++|+..+.|+.+..+. ......... ....+ .-+...+|+|++
T Consensus 148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~ 225 (251)
T d1zk4a1 148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL--VDDLPGAEEAMSQRTKTPMGHIGEPNDIAYI 225 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH--HHTSTTHHHHHTSTTTCTTSSCBCHHHHHHH
T ss_pred cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChh--HHhcCCHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 11223689999999998877642 3468999999998887653 111111000 00011 135568999999
Q ss_pred HHHHHhcc----CCceeeecCC
Q 005949 578 SIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~ 595 (668)
+++++... .+.++.+.+|
T Consensus 226 v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 226 CVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhCCCcCcEEEECcc
Confidence 99988543 3557777665
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.45 E-value=2e-13 Score=129.26 Aligned_cols=190 Identities=14% Similarity=0.104 Sum_probs=136.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+.++||||++-||+++++.|+++|++| ..+.+|++|++++.++++.. ++|+
T Consensus 11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 90 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDI 90 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCcee
Confidence 469999999999999999999999854 45678999999988887765 7999
Q ss_pred EEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+||.||...... .+...++....+++|+.++..+.+++.. .+ .++|++||...+.+
T Consensus 91 lvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~------------------ 152 (251)
T d2c07a1 91 LVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG------------------ 152 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------------
T ss_pred eeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC------------------
Confidence 999999772111 1223355667788999999999987643 33 48899998764421
Q ss_pred CCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.+....|+.||...+.+.+.+. ..+++|+..+.|+.+..+. .+...+...-+ . .-+...+|+|+++.
T Consensus 153 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~p---l-~R~~~pedvA~~v~ 228 (251)
T d2c07a1 153 NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIP---A-GRMGTPEEVANLAC 228 (251)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCT---T-SSCBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCC---C-CCCcCHHHHHHHHH
Confidence 1223679999999999988863 2468999999998887653 12222221111 1 12456899999999
Q ss_pred HHHhcc----CCceeeecCC
Q 005949 580 EMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 580 ~~~~~~----~~g~~ni~~~ 595 (668)
+++... .+.++.+.+|
T Consensus 229 fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 229 FLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCchhCCCcCcEEEECCC
Confidence 988543 4557777665
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.45 E-value=2.2e-13 Score=129.49 Aligned_cols=193 Identities=16% Similarity=0.107 Sum_probs=132.6
Q ss_pred EEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 386 FLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++|
T Consensus 4 alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 83 (255)
T d1gega_ 4 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIV 83 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEE
Confidence 5999999999999999999999854 45678999999888777664 799999
Q ss_pred EcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cC--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 437 h~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
|+||....... +...++....+++|+.|+.++.+++.. .+ ..++++||...+. +.
T Consensus 84 nnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------------~~ 145 (255)
T d1gega_ 84 NNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------------------GN 145 (255)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------CC
T ss_pred ecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc------------------cC
Confidence 99997621111 223345567788999999999988643 23 3567777755331 12
Q ss_pred CCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhccc-c---------eeecC-CCcccHhh
Q 005949 510 FTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYN-K---------VVNIP-NSMTVLDE 573 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~-~---------~~~~~-~~~~~v~D 573 (668)
+....|+.||...+.+.+.+. ..+++|+..+.|+.+.-|. .+........ . ....+ .-+...+|
T Consensus 146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pee 225 (255)
T d1gega_ 146 PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPED 225 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHH
T ss_pred cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHH
Confidence 233679999999999887763 3468999999999887663 1111111000 0 00011 13456899
Q ss_pred HHHHHHHHHhcc----CCceeeecCCC
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
+|+++++++... .+.++++.+|-
T Consensus 226 vA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 226 VAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred HHHHHHHHhCchhCCccCcEEEecCCE
Confidence 999999998543 45577776653
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.45 E-value=2.6e-13 Score=128.99 Aligned_cols=197 Identities=19% Similarity=0.167 Sum_probs=138.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|++||
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVn 85 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVN 85 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEe
Confidence 579999999999999999999999864 45678999999988887765 7999999
Q ss_pred cccccCC-CCccccccccccceehhhhhhHHHHHHHHH----c--CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----H--GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 438 ~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~--~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
.||.... |..+...++....+++|+.|+..+.+++.. . +.++|++||...+. +.+
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------------~~~ 147 (256)
T d1k2wa_ 86 NAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR------------------GEA 147 (256)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------------CCT
T ss_pred ecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc------------------ccc
Confidence 9997721 111223455667789999999999987532 1 34788888865431 122
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhcccc----------eeecC-CCcccHhhH
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNK----------VVNIP-NSMTVLDEL 574 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~----------~~~~~-~~~~~v~D~ 574 (668)
....|+.||...+.+.+.+. ..+++|+..+-|+.+-.|. .+......... ....+ .-+...+|+
T Consensus 148 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~ev 227 (256)
T d1k2wa_ 148 LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDL 227 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHH
T ss_pred cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHH
Confidence 33689999999999887763 2468999999998877664 11111110000 00011 124568999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCcc
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
|.++++++... .+.++.+-+|.-+
T Consensus 228 A~~v~fL~S~~a~~iTG~~i~vDGG~~m 255 (256)
T d1k2wa_ 228 TGMAIFLATPEADYIVAQTYNVDGGNWM 255 (256)
T ss_dssp HHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHHHHhCchhCCccCceEEECcchhh
Confidence 99999988543 4667888776544
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.44 E-value=2.8e-13 Score=128.87 Aligned_cols=192 Identities=17% Similarity=0.096 Sum_probs=135.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+.++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD 87 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD 87 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 579999999999999999999999854 45678999999888877654 789
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----cCC--cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----HGI--LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
++||+||..... ..+...++....+++|+.++.++.+++.. .+. .++++||...+
T Consensus 88 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~------------------ 149 (261)
T d1geea_ 88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------------------ 149 (261)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------------------
T ss_pred EeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc------------------
Confidence 999999987211 11223455567789999999999888743 232 46667775432
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccHhhHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVLDELL 575 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v~D~a 575 (668)
.+.+....|+.+|...+.+.+.+. ..+++++..+-|+.+.-|.. ....+... .. -.-+...+|+|
T Consensus 150 ~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~---~p-l~R~~~pediA 225 (261)
T d1geea_ 150 IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM---IP-MGYIGEPEEIA 225 (261)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT---CT-TSSCBCHHHHH
T ss_pred ccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhc---CC-CCCCCCHHHHH
Confidence 112223679999999999887753 24689999999998876641 11111110 00 11244579999
Q ss_pred HHHHHHHhcc----CCceeeecCCCc
Q 005949 576 PISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 576 ~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
+++++++... .+.++.+.+|..
T Consensus 226 ~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 226 AVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCchhcCCcCCeEEECCCee
Confidence 9999998543 466888877654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.2e-13 Score=131.19 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=135.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+.++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++
T Consensus 4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRL 83 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 479999999999999999999999854 34678999999888877655 68
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
|++||.||.. ...+.+..+++|+.++.++.+++..+ +..+|++||...+.
T Consensus 84 DilVnnAg~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--------------- 141 (254)
T d2gdza1 84 DILVNNAGVN-------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--------------- 141 (254)
T ss_dssp CEEEECCCCC-------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred Ceeccccccc-------ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc---------------
Confidence 9999999977 23456778899999998888887542 13588888865431
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHh------ccCeeEeEEeeeecCCCCChhhHHHHhhcccc------eee-----cC-C
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKE------YDNVCTLRVRMPISSDLNNPRNFITKISRYNK------VVN-----IP-N 566 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~------~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~------~~~-----~~-~ 566 (668)
+.+....|+.||...+.+.+. +. ..++|+..+.|+.+.-+. ...+..... ... .+ .
T Consensus 142 ---~~~~~~~Y~asKaal~~ltrs~ala~e~~-~~gIrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~ 215 (254)
T d2gdza1 142 ---PVAQQPVYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAI--LESIEKEENMGQYIEYKDHIKDMIKYY 215 (254)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHH--HHGGGCHHHHGGGGGGHHHHHHHHHHH
T ss_pred ---CCCCccchHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEEcCCCCChh--hhhccccccccccHHHHHHHHhcCCCC
Confidence 122236799999999988753 22 368999999998876542 222211100 000 00 1
Q ss_pred CcccHhhHHHHHHHHHhcc--CCceeeecCCCccCHH
Q 005949 567 SMTVLDELLPISIEMAKRN--LRGIWNFTNPGVVSHN 601 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~~--~~g~~ni~~~~~~s~~ 601 (668)
-+...+|+|++++.++..+ .+.++.+.+|..+.++
T Consensus 216 r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~ 252 (254)
T d2gdza1 216 GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ 252 (254)
T ss_dssp CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred CCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence 2345789999999999765 5668888887766544
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.44 E-value=2.8e-13 Score=128.74 Aligned_cols=197 Identities=16% Similarity=0.123 Sum_probs=138.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+.++||||++-||+.+++.|+++|++| ..+.+|++|+++++++++.. ++
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 84 (258)
T d1iy8a_ 5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 84 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999854 34568999999988877665 68
Q ss_pred CEEEEcccccCCCCc--cccccccccceehhhhhhHHHHHHHHH-----cCCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV--DWCESHKTDTIRTNVAGTLTLADVCRD-----HGILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 433 d~Vih~a~~~~~~~~--~~~~~~~~~~~~~Nv~~~~~ll~~~~~-----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
|++||.||....... +...++....+++|+.++.++.+++.. .+.++|++||...+.+
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~--------------- 149 (258)
T d1iy8a_ 85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG--------------- 149 (258)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB---------------
T ss_pred CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC---------------
Confidence 999999997621111 223455667899999999999998743 2447889988754311
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhccc--c----e-eecC-CCcccHh
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYN--K----V-VNIP-NSMTVLD 572 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~--~----~-~~~~-~~~~~v~ 572 (668)
.+....|+.||...+.+.+.+. ..+++|+..+-|+.+.-|. .+........ . . ...+ .-+...+
T Consensus 150 ---~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~ 226 (258)
T d1iy8a_ 150 ---IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP 226 (258)
T ss_dssp ---CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHH
Confidence 1223689999999999887763 2468999999999887663 1211111000 0 0 0011 1245689
Q ss_pred hHHHHHHHHHhcc----CCceeeecCCCcc
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
|+|+++++++... .+.++.+.+|...
T Consensus 227 dvA~~v~fL~S~~s~~itG~~i~VDGG~sa 256 (258)
T d1iy8a_ 227 EIAAVVAFLLSDDASYVNATVVPIDGGQSA 256 (258)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence 9999999998643 4567888877543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.44 E-value=3e-13 Score=127.68 Aligned_cols=194 Identities=14% Similarity=0.046 Sum_probs=131.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc-----CCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV-----KPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vi 436 (668)
+.++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++|
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilV 85 (247)
T d2ew8a1 6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILV 85 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 579999999999999999999999854 45678999999888877654 799999
Q ss_pred EcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 437 NAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 437 h~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|+||...... .+...++....+++|+.++..+.+++.. .+ .++|++||..... +.+
T Consensus 86 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~------------------~~~ 147 (247)
T d2ew8a1 86 NNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL------------------KIE 147 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS------------------CCS
T ss_pred ECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc------------------cCc
Confidence 9999772111 1233456677889999999999998743 33 4788888875431 122
Q ss_pred CCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh---HHHHhhccccee-ecCCCcccHhhHHHHHHHHHh
Q 005949 511 TGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN---FITKISRYNKVV-NIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~---~~~~~~~~~~~~-~~~~~~~~v~D~a~~~~~~~~ 583 (668)
....|+.||...+.+.+.+. ..+++|+..+.|+.+..+.. ............ ..-.-+...+|+|+++++++.
T Consensus 148 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S 227 (247)
T d2ew8a1 148 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS 227 (247)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTS
T ss_pred ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhC
Confidence 23679999999999887764 24689999999988765531 000000000000 000124457899999999986
Q ss_pred cc----CCceeeecCC
Q 005949 584 RN----LRGIWNFTNP 595 (668)
Q Consensus 584 ~~----~~g~~ni~~~ 595 (668)
.. .+.++++.+|
T Consensus 228 ~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 228 DDASFITGQTLAVDGG 243 (247)
T ss_dssp GGGTTCCSCEEEESSS
T ss_pred chhcCCcCCeEEECCC
Confidence 43 4557777665
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=1.9e-12 Score=123.84 Aligned_cols=227 Identities=16% Similarity=0.075 Sum_probs=151.2
Q ss_pred CCCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC-CcCCCCeEEEEccCCCHHHHHHHhc--
Q 005949 3 TYTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP-SKASSNFKFVKGDIASADLVNFLLI-- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-- 77 (668)
.+++|+||||||+| .||+++++.|+++ +++|++.+|.... ...... .........+..|+.+.......+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKL--KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL 77 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTT--HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHH--HHHHHHHHhhcCCcceeecccchHHHHHHHHHHh
Confidence 35789999999999 7999999999999 7889988886421 111111 1122356778899999887666552
Q ss_pred ---cCCCCEEEEcCccCCccccc---------CChHHHHHHHHHHHHHHHHHHHHcC-CCcEEEEEcCccccCCCCCCcC
Q 005949 78 ---TESIDTIMHFAAQTHVDNSF---------GNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDAV 144 (668)
Q Consensus 78 ---~~~~d~Vih~a~~~~~~~~~---------~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~ 144 (668)
...+|++||+|+........ +.....+..|+.+...+.+++...- .-+.+|++||.....+.
T Consensus 78 ~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~----- 152 (258)
T d1qsga_ 78 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----- 152 (258)
T ss_dssp HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----
T ss_pred hhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC-----
Confidence 24679999999875432211 1123455677777777777665431 12468888886542221
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCc
Q 005949 145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSN 221 (668)
Q Consensus 145 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (668)
.....|+.+|.+.+.+.+..+.++ ++++..++||.|..+..................-++
T Consensus 153 ---------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl-------- 215 (258)
T d1qsga_ 153 ---------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI-------- 215 (258)
T ss_dssp ---------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT--------
T ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCC--------
Confidence 123569999999999999987664 799999999999887643222222333333322221
Q ss_pred eEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 222 VRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 222 ~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
..+...+|++.++..++... -.|+++.+.+|.++
T Consensus 216 -~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i 252 (258)
T d1qsga_ 216 -RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 252 (258)
T ss_dssp -SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred -CCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence 12567899999999988543 35788998887643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.43 E-value=2.1e-13 Score=129.18 Aligned_cols=192 Identities=15% Similarity=0.087 Sum_probs=135.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++||
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVn 86 (253)
T d1hxha_ 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN 86 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 579999999999999999999999865 45678999998888777765 7899999
Q ss_pred cccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTG 512 (668)
Q Consensus 438 ~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~ 512 (668)
+||....... +...++....+++|+.++..+.+++.. .+.++|++||...+. +.+..
T Consensus 87 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~------------------~~~~~ 148 (253)
T d1hxha_ 87 NAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL------------------PIEQY 148 (253)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------------------CCTTB
T ss_pred cccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc------------------Ccccc
Confidence 9997721111 223445567889999999998888754 355788888865431 12233
Q ss_pred CcchhhHHHHHHHHHhccC----e-eEeEEeeeecCCCCChhhHHHHhhcccc---------eeecCCCcccHhhHHHHH
Q 005949 513 SFYSKTKAMVEELLKEYDN----V-CTLRVRMPISSDLNNPRNFITKISRYNK---------VVNIPNSMTVLDELLPIS 578 (668)
Q Consensus 513 ~~Y~~sK~~~E~~~~~~~~----~-~~l~~~~~r~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~v~D~a~~~ 578 (668)
..|+.||...+.+.+.+.. . +++|+..+-|+.+..+. ......... ......-+...+|+|+++
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v 226 (253)
T d1hxha_ 149 AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM--MQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV 226 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH--HHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh--HHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHH
Confidence 6799999999988876532 2 56999999998777553 222211110 001112355679999999
Q ss_pred HHHHhcc----CCceeeecCC
Q 005949 579 IEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~ 595 (668)
++++... .+.++++-+|
T Consensus 227 ~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 227 LFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp HHHHSGGGTTCCSCEEEESSS
T ss_pred HHHhChhhCCCcCcEEEECcc
Confidence 9998543 4556777654
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.43 E-value=5.5e-13 Score=126.94 Aligned_cols=193 Identities=17% Similarity=0.152 Sum_probs=134.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCEE
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
.+|||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++
T Consensus 4 ValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (257)
T d2rhca1 4 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL 83 (257)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46999999999999999999999854 45678999999888777654 68999
Q ss_pred EEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH------cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 436 FNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD------HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 436 ih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~------~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
||+||...... .+...++....+++|+.++.++.+++.. .+ ..++++||...+.
T Consensus 84 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~------------------ 145 (257)
T d2rhca1 84 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ------------------ 145 (257)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS------------------
T ss_pred EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc------------------
Confidence 99999772111 1223455667899999999999998853 23 3677777765431
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhccc-----ce-----eecC-CCcccH
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYN-----KV-----VNIP-NSMTVL 571 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~-----~~-----~~~~-~~~~~v 571 (668)
+.+....|+.||...+.+.+.+. ..+++|+..+-|+.+.-|. .+........ .. ...+ .-+...
T Consensus 146 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~p 225 (257)
T d2rhca1 146 GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 225 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCH
Confidence 11223679999999999887753 2468999999999887653 1111110000 00 0011 135568
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCC
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+|+|+++++++... .+.++.+.+|
T Consensus 226 edia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 226 SEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 99999999998543 4557777654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.43 E-value=6.5e-13 Score=126.31 Aligned_cols=190 Identities=14% Similarity=0.037 Sum_probs=133.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc------CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV------KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~------~~d 433 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|
T Consensus 9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id 88 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 88 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence 579999999999999999999999854 45678999998887766542 589
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
++||+||...... .+...++....+++|+.++.++.+++... +.++|++||.....
T Consensus 89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------------ 150 (259)
T d2ae2a_ 89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL------------------ 150 (259)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS------------------
T ss_pred EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc------------------
Confidence 9999999772111 12334455678899999999999887542 23788888865331
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh-----------HHHHhhcccceeecCCCcccHhh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN-----------FITKISRYNKVVNIPNSMTVLDE 573 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~-----------~~~~~~~~~~~~~~~~~~~~v~D 573 (668)
+.+....|+.+|...+.+.+.+. ..+++|+..+-|+.+.-+.. .+.++...- .. .-+...+|
T Consensus 151 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---pl-~R~g~ped 226 (259)
T d2ae2a_ 151 AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---AL-RRMGEPKE 226 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---TT-CSCBCHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcC---CC-CCCcCHHH
Confidence 11233679999999999887753 23689999999988876531 111111110 11 12445789
Q ss_pred HHHHHHHHHhcc----CCceeeecCC
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
+|+++++++... .+.++.+.+|
T Consensus 227 vA~~v~fL~S~~s~~itG~~i~VDGG 252 (259)
T d2ae2a_ 227 LAAMVAFLCFPAASYVTGQIIYVDGG 252 (259)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCchhCCCcCcEEEECCC
Confidence 999999988643 4557777665
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.42 E-value=2.6e-13 Score=127.82 Aligned_cols=190 Identities=15% Similarity=0.088 Sum_probs=135.4
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
-|+||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV 82 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 58999999999999999999999854 35678999999888877654 7999
Q ss_pred EEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----c-CCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----H-GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+||+||..... ..+...++....+++|+.++.++.+++.. . +.++|++||...+.+
T Consensus 83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~------------------ 144 (244)
T d1edoa_ 83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG------------------ 144 (244)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC------------------
T ss_pred cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC------------------
Confidence 99999977211 11233455667889999999999888743 2 348999999765422
Q ss_pred CCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
.+....|+.||...+.+.+.+.. .+++|+..+-|+.+.-+. .+...+...- .. .-+...+|+|+++.
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~---pl-~R~~~p~dvA~~v~ 220 (244)
T d1edoa_ 145 NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI---PL-GRTGQPENVAGLVE 220 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC---TT-CSCBCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcC---CC-CCCcCHHHHHHHHH
Confidence 12236799999999998887642 358999999998876553 1122221111 01 12445899999999
Q ss_pred HHH-hcc----CCceeeecCCC
Q 005949 580 EMA-KRN----LRGIWNFTNPG 596 (668)
Q Consensus 580 ~~~-~~~----~~g~~ni~~~~ 596 (668)
++. ... .+.++.+.+|-
T Consensus 221 fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 221 FLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHCCchhcCCcCCeEEeCCCe
Confidence 885 322 45577776653
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=5.2e-13 Score=125.96 Aligned_cols=195 Identities=15% Similarity=0.084 Sum_probs=138.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc--------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
.++++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.. ++|++||
T Consensus 6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVn 85 (250)
T d1ydea1 6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVN 85 (250)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEe
Confidence 3579999999999999999999999864 45678999999988887765 7899999
Q ss_pred cccccCCCC-c-cccccccccceehhhhhhHHHHHHHHH----cCCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPN-V-DWCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 438 ~a~~~~~~~-~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
+||....+. . +...++....+++|+.++.++.+++.. .+..+|++||...... .+.
T Consensus 86 nAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~------------------~~~ 147 (250)
T d1ydea1 86 NAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG------------------QAQ 147 (250)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC------------------CTT
T ss_pred cccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc------------------ccC
Confidence 999662212 1 223445667899999999999988753 3558888888764421 122
Q ss_pred CCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc---------eeecC-CCcccHhhHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK---------VVNIP-NSMTVLDELLPIS 578 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---------~~~~~-~~~~~v~D~a~~~ 578 (668)
...|+.+|...+.+.+.+. ..+++|+..+.|+.+.-|. ...+....+ ....+ .-+...+|+|.++
T Consensus 148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v 225 (250)
T d1ydea1 148 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL--WEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA 225 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH--HHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChh--HHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 3689999999999888763 2468999999998886552 122111100 00011 1355689999999
Q ss_pred HHHHhcc---CCceeeecCCCc
Q 005949 579 IEMAKRN---LRGIWNFTNPGV 597 (668)
Q Consensus 579 ~~~~~~~---~~g~~ni~~~~~ 597 (668)
.+++... .+.++.+.+|..
T Consensus 226 ~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 226 VFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp HHHHHHCTTCCSCEEEESTTTT
T ss_pred HHHhCccCCCcCCeEEECCCcc
Confidence 9888532 455777776643
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.41 E-value=3.8e-13 Score=128.36 Aligned_cols=194 Identities=14% Similarity=0.104 Sum_probs=133.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+.++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. ++
T Consensus 5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 84 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 469999999999999999999999854 35678999999988887765 79
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|++||+||....... +...++....+++|+.++.++.+++.. .+ .++|++||...+.+
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~---------------- 148 (260)
T d1x1ta1 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA---------------- 148 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------
T ss_pred cEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec----------------
Confidence 999999997732111 223455667889999999998887643 33 48888888764411
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhcccce-----------eecC-CCcc
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRYNKV-----------VNIP-NSMT 569 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~~~~-----------~~~~-~~~~ 569 (668)
.+....|+.||...+.+.+.+. ..+++++..+.|+.+.-|. .++......... ...+ .-+.
T Consensus 149 --~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g 226 (260)
T d1x1ta1 149 --SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226 (260)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCB
T ss_pred --cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCc
Confidence 1233679999999999887763 2468999999998876553 111111110000 0001 1345
Q ss_pred cHhhHHHHHHHHHhcc----CCceeeecCC
Q 005949 570 VLDELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
..+|+|+++++++... .+.++++.+|
T Consensus 227 ~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 227 TPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 6889999999988543 4557777665
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=2.4e-13 Score=131.23 Aligned_cols=185 Identities=15% Similarity=0.075 Sum_probs=124.4
Q ss_pred CCeE-EEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC--CcCCCCeEEEEccCCCHHHHHHHhcc----
Q 005949 6 PKNI-LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP--SKASSNFKFVKGDIASADLVNFLLIT---- 78 (668)
Q Consensus 6 ~~~v-LVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 78 (668)
+|+| |||||++.||.++++.|++++ +.+|++.+|.... ++.... .....++.++.+|++|.+++.++++.
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~ 78 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTR--GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 78 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHH--HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence 4566 899999999999999999864 6789999886432 111111 11245688999999999998776532
Q ss_pred -CCCCEEEEcCccCCccccc----CChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcC--------
Q 005949 79 -ESIDTIMHFAAQTHVDNSF----GNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAV-------- 144 (668)
Q Consensus 79 -~~~d~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~-------- 144 (668)
.++|++||+||........ ++....+++|+.|+..+.+.+... ..-.++|.+||...........+
T Consensus 79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~ 158 (275)
T d1wmaa1 79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 158 (275)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcc
Confidence 4799999999976532222 234467899999999999877542 11258999999554311100000
Q ss_pred -------------------CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh-------cCCCEEEEeeCceeCCC
Q 005949 145 -------------------VGNHEASQLLPTNPYSATKAGAEMLVMAYGRS-------YGLPVITTRGNNVYGPN 193 (668)
Q Consensus 145 -------------------~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~v~G~~ 193 (668)
..........+...|+.+|.....+.+.++++ .++.+..+.||.|-.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m 233 (275)
T d1wmaa1 159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence 00001112234567999999998887665543 27999999999987653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.41 E-value=2e-12 Score=121.48 Aligned_cols=199 Identities=14% Similarity=0.128 Sum_probs=132.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHh-------ccC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLL-------ITE 79 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~ 79 (668)
.|||||||+|.||+++++.|+++ +++|++++|..... ......+.+|..+.+...... ...
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999 79999999864211 112334456666655433222 235
Q ss_pred CCCEEEEcCccCCcc-ccc----CChHHHHHHHHHHHHHHHHHHHHc-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCC
Q 005949 80 SIDTIMHFAAQTHVD-NSF----GNSFEFTKNNIYGTHVLLEACKVT-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQL 153 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~-~~~----~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~ 153 (668)
++|++||+||..... ... +.+...+++|+.++..+.+++... ..-.++|++||...+.+...
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------ 138 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS------------ 138 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc------------
Confidence 689999999964321 111 223457899999998888766543 11258999999776544321
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhc-----CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeH
Q 005949 154 LPTNPYSATKAGAEMLVMAYGRSY-----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYC 228 (668)
Q Consensus 154 ~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 228 (668)
...|+.+|.+.+.+.+.++.++ ++.+..+.||.+-.+ +.+...... ....++..
T Consensus 139 --~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~----------~~~~~~~~~---------~~~~~~~~ 197 (235)
T d1ooea_ 139 --MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP----------MNRKWMPNA---------DHSSWTPL 197 (235)
T ss_dssp --BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH----------HHHHHSTTC---------CGGGCBCH
T ss_pred --ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc----------chhhhCcCC---------ccccCCCH
Confidence 3469999999999999987653 667888899987533 222222111 12246788
Q ss_pred HHHHHHHHHHHhcC----CCCceEEE
Q 005949 229 EDVAEAFECILHKG----EVGHVYNV 250 (668)
Q Consensus 229 ~D~a~ai~~~~~~~----~~~~~~ni 250 (668)
+|+++.++..+..+ ..|..+.+
T Consensus 198 ~~va~~~~~~l~~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 198 SFISEHLLKWTTETSSRPSSGALLKI 223 (235)
T ss_dssp HHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred HHHHHHHHHHhcCccccCCCceEEEE
Confidence 99999987555432 24555555
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.41 E-value=8.7e-13 Score=126.40 Aligned_cols=197 Identities=15% Similarity=0.102 Sum_probs=136.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
.+.++||||++-||+.+++.|+++|++| .++.+|++|+++++++++.. ++|+
T Consensus 6 gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 85 (268)
T d2bgka1 6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 85 (268)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcce
Confidence 3579999999999999999999999864 35678999999988877654 7899
Q ss_pred EEEcccccCCCC---ccccccccccceehhhhhhHHHHHHHHHc----C-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPN---VDWCESHKTDTIRTNVAGTLTLADVCRDH----G-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 435 Vih~a~~~~~~~---~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
+||+||...... .+...++....+++|+.++..+.+++..+ + ..++++||...+...
T Consensus 86 lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~--------------- 150 (268)
T d2bgka1 86 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG--------------- 150 (268)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC---------------
T ss_pred eccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc---------------
Confidence 999999762111 11223445667889999999999887542 3 377888776543110
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh---------hHHHHhhcccceeecCCCcccHhhH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR---------NFITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
......|+.||...+.+.+.+. ..+++|+..+.|+.+..|. .......... .....-+...+|+
T Consensus 151 --~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~~~~gr~~~pedv 226 (268)
T d2bgka1 151 --EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA--ANLKGTLLRAEDV 226 (268)
T ss_dssp --TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT--CSSCSCCCCHHHH
T ss_pred --cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhc--cccCCCCcCHHHH
Confidence 0112479999999999888763 2468999999998876553 1111111110 0111235568999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCcc
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
|+++++++... .+.++.+-+|-..
T Consensus 227 A~~v~fL~S~~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 227 ADAVAYLAGDESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHhChhhCCccCceEEECcCccc
Confidence 99999998543 4668888876443
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.40 E-value=6.1e-13 Score=126.69 Aligned_cols=193 Identities=16% Similarity=0.136 Sum_probs=134.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+.++||||++.||+++++.|+++|++| ..+.+|++|+++++++++.. ++|+
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 85 (260)
T d1zema1 6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDF 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCe
Confidence 579999999999999999999999854 45678999999888887765 7999
Q ss_pred EEEcccccCC--CCccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 435 Vih~a~~~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+||+||.... |-.+...++....+++|+.++..+.+++..+ +.++|++||...+.+
T Consensus 86 lVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~----------------- 148 (260)
T d1zema1 86 LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG----------------- 148 (260)
T ss_dssp EEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-----------------
T ss_pred ehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-----------------
Confidence 9999997621 1112334556678889999999999987432 348899988765421
Q ss_pred CCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--HHHHhh-cccc---e-----------eecC-C
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKIS-RYNK---V-----------VNIP-N 566 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~-~~~~---~-----------~~~~-~ 566 (668)
.+....|+.+|...+.+.+.+. ..+++|+..+-|+.+.-+.. ...... .... . ...+ .
T Consensus 149 -~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~ 227 (260)
T d1zema1 149 -PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR 227 (260)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC
Confidence 1223579999999999887763 23589999999988876531 000000 0000 0 0001 1
Q ss_pred CcccHhhHHHHHHHHHhcc----CCceeeecC
Q 005949 567 SMTVLDELLPISIEMAKRN----LRGIWNFTN 594 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~~----~~g~~ni~~ 594 (668)
-+...+|+|.++.+++... .+.++++-+
T Consensus 228 R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG 259 (260)
T d1zema1 228 RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 259 (260)
T ss_dssp SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred CCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence 2445789999999998643 345666654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.40 E-value=5.3e-13 Score=126.83 Aligned_cols=195 Identities=15% Similarity=0.115 Sum_probs=125.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc------CC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV------KP 432 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~------~~ 432 (668)
.++++||||++-||+.+++.|+++|++| ..+.+|++++++++++++.. ++
T Consensus 8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~i 87 (259)
T d1xq1a_ 8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKL 87 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCc
Confidence 3589999999999999999999999854 45668999988877766542 58
Q ss_pred CEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 433 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
|++||+||.... |..+...++....+++|+.++..+.+++.. .+ .++|++||.....+
T Consensus 88 dilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~---------------- 151 (259)
T d1xq1a_ 88 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS---------------- 151 (259)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------------
T ss_pred ccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc----------------
Confidence 999999997721 111233455667889999999999988743 33 58888888664421
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhccc--c--eeecC-CCcccHhhHHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYN--K--VVNIP-NSMTVLDELLPIS 578 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~--~--~~~~~-~~~~~v~D~a~~~ 578 (668)
.+....|+.+|...+.+.+.+. ..+++|+-.+-|+.+.-|. ........ . ....+ .-+...+|+|+++
T Consensus 152 --~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~--~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v 227 (259)
T d1xq1a_ 152 --ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL--AEAVYDDEFKKVVISRKPLGRFGEPEEVSSLV 227 (259)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHH
T ss_pred --ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH--hhhhchHHHHHHHHhCCCCCCCcCHHHHHHHH
Confidence 1223679999999999887753 2368999999998876553 11111100 0 00011 1244588999999
Q ss_pred HHHHhcc----CCceeeecCCCc
Q 005949 579 IEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 579 ~~~~~~~----~~g~~ni~~~~~ 597 (668)
+.++... .+.++++.+|-.
T Consensus 228 ~fL~S~~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 228 AFLCMPAASYITGQTICVDGGLT 250 (259)
T ss_dssp HHHTSGGGTTCCSCEEECCCCEE
T ss_pred HHHhCchhcCCcCcEEEeCCCEE
Confidence 9988532 455777766643
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.39 E-value=7.4e-12 Score=118.39 Aligned_cols=211 Identities=19% Similarity=0.218 Sum_probs=143.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc----cCCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI----TESID 82 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~~~d 82 (668)
|++|||||++.||+++++.|+++ |++|++.+|... ..+...+.+|+.+......+.. ....+
T Consensus 2 K~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccccc
Confidence 68999999999999999999999 789999988532 2346678999999877665542 23455
Q ss_pred EEEEcCccCCcc--------cccCChHHHHHHHHHHHHHHHHHHHHc---------CCCcEEEEEcCccccCCCCCCcCC
Q 005949 83 TIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKVT---------GQIRRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 83 ~Vih~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~v~~SS~~vyg~~~~~~~~ 145 (668)
.+++.++..... ...+.....++.|+.+...+...+... ..-.++|++||...+.+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~----- 142 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI----- 142 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-----
Confidence 666666543211 111233467788988888877665432 1235899999976643322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|...+.+.+.++.+ +|+++..+.||.|-.+.... .............++ .
T Consensus 143 ---------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~--~~~~~~~~~~~~~~~--~------ 203 (241)
T d1uaya_ 143 ---------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG--LPEKAKASLAAQVPF--P------ 203 (241)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT--SCHHHHHHHHTTCCS--S------
T ss_pred ---------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch--hhhhHHHHHHhcCCC--C------
Confidence 1346999999999999998865 48999999999987653311 112222222222221 1
Q ss_pred EeceeHHHHHHHHHHHHhcCC-CCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKGE-VGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~~-~~~~~ni~~~~~ 255 (668)
.-+...+|+|.++..++...- .|+++.+.+|-.
T Consensus 204 ~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~ 237 (241)
T d1uaya_ 204 PRLGRPEEYAALVLHILENPMLNGEVVRLDGALR 237 (241)
T ss_dssp CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred CCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence 124578999999998887542 578888887753
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.38 E-value=8.5e-13 Score=123.83 Aligned_cols=176 Identities=15% Similarity=0.152 Sum_probs=126.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCc-------c------------------------cccccccCChhHHHHHhhhc---
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIP-------F------------------------EYGKGRLEDCSSLIADVQSV--- 430 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~-------v------------------------~~~~~D~~d~~~~~~~l~~~--- 430 (668)
-|+||||++-||+++++.|+++|++ | ..+.+|++|+++++++++..
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3799999999999999999999975 2 34678999999888777654
Q ss_pred --CCCEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----c-CCcEEEEecceeEeecCCCCCCCCCCC
Q 005949 431 --KPTHVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----H-GILMMNYATGCIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 431 --~~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~~~v~~sS~~vy~~~~~~p~~~~~~~ 502 (668)
++|++||+||....... +...++....+++|+.|+..+.+++.. . +.+++++||...+.
T Consensus 83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------- 149 (240)
T d2bd0a1 83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------------- 149 (240)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC-------------
Confidence 68999999997721111 223455567889999999999888753 3 34788888876441
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHH
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISI 579 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~ 579 (668)
+.+....|+.||...+.+.+.+. ..+++++..+.|+.+.-+. ...+. ......+...+|+|++++
T Consensus 150 -----~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~--~~~~~-----~~~~~~~~~PedvA~~v~ 217 (240)
T d2bd0a1 150 -----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM--WGKVD-----DEMQALMMMPEDIAAPVV 217 (240)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT--TCCCC-----STTGGGSBCHHHHHHHHH
T ss_pred -----CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch--hhhcC-----HhhHhcCCCHHHHHHHHH
Confidence 11234689999999888877752 3468999999998776542 11110 011112344689999999
Q ss_pred HHHhcc
Q 005949 580 EMAKRN 585 (668)
Q Consensus 580 ~~~~~~ 585 (668)
.++.++
T Consensus 218 ~l~s~~ 223 (240)
T d2bd0a1 218 QAYLQP 223 (240)
T ss_dssp HHHTSC
T ss_pred HHHcCC
Confidence 998764
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.36 E-value=6.4e-13 Score=126.75 Aligned_cols=198 Identities=13% Similarity=0.129 Sum_probs=132.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+++|||||++.||+++++.|+++|++| ..+.+|++|+++++++++.+ ++|
T Consensus 10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 89 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 89 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCc
Confidence 579999999999999999999999854 45678999999988877654 689
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHH----c-CC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRD----H-GI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
++||+||..... ..+...++....+++|+.++.++.+++.. . +. .++..+|...+..... .-
T Consensus 90 ilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-----------~~ 158 (260)
T d1h5qa_ 90 GLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-----------SL 158 (260)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-----------ET
T ss_pred EecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-----------cc
Confidence 999999976211 11223445567788999999998887643 2 33 3344444332211100 00
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
.+.+....|+.+|...+.+.+.+. ..+++|+-.+-|+.+--+. .+...+...- .. .-+...+|+|++
T Consensus 159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~---pl-~R~g~pedvA~~ 234 (260)
T d1h5qa_ 159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNI---PL-NRFAQPEEMTGQ 234 (260)
T ss_dssp TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTC---TT-SSCBCGGGGHHH
T ss_pred ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcC---CC-CCCcCHHHHHHH
Confidence 111233679999999999887763 2468999999998876553 2222222111 11 124558999999
Q ss_pred HHHHHhcc----CCceeeecCCC
Q 005949 578 SIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~ 596 (668)
+++++... .+.++.+.+|.
T Consensus 235 v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 235 AILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHhcchhCCCcCceEEECCCe
Confidence 99988543 45577777764
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.36 E-value=1.1e-11 Score=119.59 Aligned_cols=226 Identities=16% Similarity=0.050 Sum_probs=142.0
Q ss_pred CCCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhcc-
Q 005949 3 TYTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLIT- 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 78 (668)
.+++|++|||||+| .||.++++.|+++ |++|++.+|..... ..+.+. ........+.+|+.+.+.+.+++..
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~--~~~~~~~~~~~d~~~~~~~~~~~~~~ 77 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIA--QELNSPYVYELDVSKEEHFKSLYNSV 77 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHH--HHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHH--hhCCceeEeeecccchhhHHHHHHHH
Confidence 46789999999987 7999999999999 78999999863211 111111 1234567789999999887776632
Q ss_pred ----CCCCEEEEcCccCCcccccC-----ChHHHHHHHH---HHHHHHHHHHHHcCCC-cEEEEEcCccccCCCCCCcCC
Q 005949 79 ----ESIDTIMHFAAQTHVDNSFG-----NSFEFTKNNI---YGTHVLLEACKVTGQI-RRFIHVSTDEVYGETDEDAVV 145 (668)
Q Consensus 79 ----~~~d~Vih~a~~~~~~~~~~-----~~~~~~~~nv---~~~~~l~~~~~~~~~~-~~~v~~SS~~vyg~~~~~~~~ 145 (668)
..+|++||++|......... ........+. .....+.....+.... ..++.+|+........
T Consensus 78 ~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~----- 152 (274)
T d2pd4a1 78 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA----- 152 (274)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred HHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccc-----
Confidence 47899999999755322111 1222222222 2333333333332222 3455555555433322
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 146 GNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 146 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.+|...+.+.+..+.++ |+++..+.||.+..+......-............+.
T Consensus 153 ---------~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------- 214 (274)
T d2pd4a1 153 ---------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL--------- 214 (274)
T ss_dssp ---------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------
T ss_pred ---------cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------
Confidence 23469999999999998877653 899999999998876542211112222222222211
Q ss_pred EeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCc
Q 005949 223 RSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKE 255 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~ 255 (668)
..+...+|+|.++..++... ..|+++.+.+|..
T Consensus 215 ~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 215 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence 13467899999999988653 3578899988763
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.36 E-value=2.9e-12 Score=121.60 Aligned_cols=190 Identities=16% Similarity=0.061 Sum_probs=132.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc------CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV------KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~------~~d 433 (668)
++++||||++-||+++++.|+++|++| ..+.+|++++++++++++.+ .+|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id 86 (258)
T d1ae1a_ 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 86 (258)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence 579999999999999999999999854 45679999998877665432 489
Q ss_pred EEEEcccccCCC-CccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRP-NVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 434 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+|||+||..... -.+...++....+++|+.++..+.+++... +.+++++||.....
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~------------------ 148 (258)
T d1ae1a_ 87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS------------------ 148 (258)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS------------------
T ss_pred EEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc------------------
Confidence 999999977211 112234556678899999999999887532 33788888876431
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--h----------HHHHhhcccceeecCCCcccHh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--N----------FITKISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--~----------~~~~~~~~~~~~~~~~~~~~v~ 572 (668)
+.+....|+.+|...+.+.+.+.. ..++|+-.+.|+.+..+. + ....+...- . -.-+...+
T Consensus 149 ~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~---p-lgR~~~pe 224 (258)
T d1ae1a_ 149 ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT---P-MGRAGKPQ 224 (258)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS---T-TCSCBCHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC---C-CCCCcCHH
Confidence 112236899999999998887632 368999999998887653 1 111111110 0 12356789
Q ss_pred hHHHHHHHHHhcc----CCceeeecCC
Q 005949 573 ELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 573 D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
|+|.++..++... .+..+.+-+|
T Consensus 225 diA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 225 EVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 9999999999532 3456776665
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=2.4e-12 Score=123.49 Aligned_cols=200 Identities=13% Similarity=0.088 Sum_probs=137.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
+++|++|||||++.||+++++.|+++ |++|++.+|... .++.... ......+..+.+|+.+.+.....+.
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~--~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 87 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKE--TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG 87 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHH--HHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHH
Confidence 46899999999999999999999999 789999998642 2222111 1223457888999999887766542
Q ss_pred --cCCCCEEEEcCccCCccc----ccCChHHHHHHHHHHHHHHHHHHH----HcCCCcEEEEEcCccccCCCCCCcCCCC
Q 005949 78 --TESIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHVSTDEVYGETDEDAVVGN 147 (668)
Q Consensus 78 --~~~~d~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 147 (668)
...+|+++++||...... ..++....+++|+.++..+.+.+. +.+ .++|++||...+-+..
T Consensus 88 ~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~~p------- 158 (269)
T d1xu9a_ 88 KLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYP------- 158 (269)
T ss_dssp HHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSCCT-------
T ss_pred HHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCCCC-------
Confidence 246899999999755332 223345678999988888776653 222 6899999976543322
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHh-----cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCCCce
Q 005949 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS-----YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNV 222 (668)
Q Consensus 148 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (668)
....|+.||.+.+.+.+.++.+ .++.+..+.||.|-.+ +.+....+.. .
T Consensus 159 -------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~----------~~~~~~~~~~---------~ 212 (269)
T d1xu9a_ 159 -------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE----------TAMKAVSGIV---------H 212 (269)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----------HHHHHSCGGG---------G
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc----------HHHHhccCCc---------c
Confidence 2357999999999999988754 3588889999987543 2222222111 1
Q ss_pred EeceeHHHHHHHHHHHHhcC
Q 005949 223 RSYLYCEDVAEAFECILHKG 242 (668)
Q Consensus 223 ~~~i~v~D~a~ai~~~~~~~ 242 (668)
......+++++.++..+...
T Consensus 213 ~~~~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 213 MQAAPKEECALEIIKGGALR 232 (269)
T ss_dssp GGCBCHHHHHHHHHHHHHTT
T ss_pred ccCCCHHHHHHHHHHHhhcC
Confidence 12345778888887766544
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.36 E-value=7.1e-13 Score=124.57 Aligned_cols=192 Identities=14% Similarity=0.048 Sum_probs=134.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||++.||+.+++.|+++|++| ..+.+|++++++++++++.. ++|++||
T Consensus 6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLin 85 (241)
T d2a4ka1 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAH 85 (241)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEecc
Confidence 579999999999999999999999854 45678999999998877765 6999999
Q ss_pred cccccCCCC-ccccccccccceehhhhhhHHHHHHHHHcC--CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 438 AAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRDHG--ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 438 ~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~--~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
+|+...... .+...++....+++|+.++.++.+++...- ...++++|+... .+.+....
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~------------------~~~~~~~~ 147 (241)
T d2a4ka1 86 FAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG------------------LGAFGLAH 147 (241)
T ss_dssp GGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT------------------CCHHHHHH
T ss_pred ccccccccchhhhhccccccccccccccccccccccccccccccceeecccccc------------------ccccCccc
Confidence 999772111 122344556778899999999999987652 245555554311 01112357
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~ 585 (668)
|+.+|...|.+.+.++ ...++++..+.|+.+-.+. .......+..+ -.-+...+|+|+++..++...
T Consensus 148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p----~~r~~~p~dva~~v~fL~S~~ 223 (241)
T d2a4ka1 148 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP----LGRAGRPEEVAQAALFLLSEE 223 (241)
T ss_dssp HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTST----TCSCBCHHHHHHHHHHHHSGG
T ss_pred cchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCC----CCCCcCHHHHHHHHHHHhcch
Confidence 9999999999988864 2357999999998876543 11122221111 123556899999999999643
Q ss_pred ----CCceeeecCCCc
Q 005949 586 ----LRGIWNFTNPGV 597 (668)
Q Consensus 586 ----~~g~~ni~~~~~ 597 (668)
.+.++.+-+|..
T Consensus 224 s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 224 SAYITGQALYVDGGRS 239 (241)
T ss_dssp GTTCCSCEEEESTTTT
T ss_pred hCCCcCceEEeCCCcc
Confidence 355777766644
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=3e-12 Score=123.99 Aligned_cols=194 Identities=13% Similarity=0.053 Sum_probs=132.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------------cccccccCChhHHHHHhhhc----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------------EYGKGRLEDCSSLIADVQSV---- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------------~~~~~D~~d~~~~~~~l~~~---- 430 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++..
T Consensus 13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 92 (297)
T d1yxma1 13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 92 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 579999999999999999999999854 23568999999888877654
Q ss_pred -CCCEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCC
Q 005949 431 -KPTHVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 431 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
++|++||+||.... +..+...++....+++|+.++..+.+++... +..++++||+...
T Consensus 93 G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~--------------- 157 (297)
T d1yxma1 93 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA--------------- 157 (297)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT---------------
T ss_pred CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc---------------
Confidence 78999999997621 1112234455677889999999999987542 3345555443211
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------HHHHhhcccceeecC-CCcccHhh
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------FITKISRYNKVVNIP-NSMTVLDE 573 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------~~~~~~~~~~~~~~~-~~~~~v~D 573 (668)
..+....|+.+|...+.+.+... ..+++|+-.+.|+.+.-+.. .-........ ...+ .-+...+|
T Consensus 158 ----~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~~~plgR~g~ped 232 (297)
T d1yxma1 158 ----GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-QKIPAKRIGVPEE 232 (297)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-GGSTTSSCBCTHH
T ss_pred ----cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHH-hcCCCCCCcCHHH
Confidence 11223679999999998887753 23689999999988765531 0001111000 0011 13445789
Q ss_pred HHHHHHHHHhcc----CCceeeecCCCc
Q 005949 574 LLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 574 ~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
+|.++++++... .+.++.+.+|..
T Consensus 233 vA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 233 VSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 999999998543 566888877644
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.35 E-value=4.6e-12 Score=121.91 Aligned_cols=227 Identities=11% Similarity=0.023 Sum_probs=140.6
Q ss_pred CCCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc---
Q 005949 3 TYTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI--- 77 (668)
Q Consensus 3 ~~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 77 (668)
.+++|++|||||+| .||.++++.|+++ |.+|++.+|.... ..+.+. +....+...+++|+.+.+....+++
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~-~~~~~~-~~~~~~~~~~~~dv~~~~~~~~~~~~v~ 78 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLR-LIQRIT-DRLPAKAPLLELDVQNEEHLASLAGRVT 78 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHH-HHHHHH-TTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHH-HHHHHH-HHcCCceeeEeeecccccccccccchhh
Confidence 46789999999765 5999999999999 6888888775321 111111 2224467788999999876655542
Q ss_pred ----c-CCCCEEEEcCccCCcc---------cccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCCCCc
Q 005949 78 ----T-ESIDTIMHFAAQTHVD---------NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA 143 (668)
Q Consensus 78 ----~-~~~d~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~~~~ 143 (668)
. ..+|+++|+||..... ..+......+..|+...................+.++|........
T Consensus 79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p--- 155 (268)
T d2h7ma1 79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP--- 155 (268)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT---
T ss_pred hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCc---
Confidence 1 3579999999965421 1112233455666666666666665433223444444433322211
Q ss_pred CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhc---CCCEEEEeeCceeCCCC------CCC----ChHHHHHHHHHcC
Q 005949 144 VVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQ------FPE----KLIPKFILLAMRG 210 (668)
Q Consensus 144 ~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~------~~~----~~~~~~~~~~~~~ 210 (668)
....|+.+|...+.+.+.++.++ ++++..+.||.|-.+.. ... .....+.....+.
T Consensus 156 -----------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (268)
T d2h7ma1 156 -----------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR 224 (268)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH
T ss_pred -----------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhc
Confidence 23479999999999999887653 79999999998875421 000 1111222222222
Q ss_pred CCceeecCCCceEeceeHHHHHHHHHHHHhcCC---CCceEEEcCCCc
Q 005949 211 LPLPIHGDGSNVRSYLYCEDVAEAFECILHKGE---VGHVYNVGTKKE 255 (668)
Q Consensus 211 ~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~ 255 (668)
-++ .+.+...+|+++++..++.... .|+++.+.+|..
T Consensus 225 ~pl--------~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 225 API--------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp CTT--------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred CCC--------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence 221 1124467899999998885432 577888887754
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.32 E-value=3.5e-12 Score=120.81 Aligned_cols=190 Identities=8% Similarity=0.027 Sum_probs=131.8
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc------------------cccccccCChhHHHHHhhhc-----CCCEEEEcccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFNAAGV 441 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~ 441 (668)
.++||||++.||+.+++.|+++|++| .+...|++|+++++++++.. ++|++||+||.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 48999999999999999999999976 34567888877766665543 78999999986
Q ss_pred cCC--CCccccccccccceehhhhhhHHHHHHHHH----c-CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCc
Q 005949 442 TGR--PNVDWCESHKTDTIRTNVAGTLTLADVCRD----H-GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSF 514 (668)
Q Consensus 442 ~~~--~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~ 514 (668)
... |-.+...++....+++|+.++.++.+++.. . +.++|++||...+.+ .+....
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~------------------~~~~~~ 143 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP------------------WKELST 143 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC------------------CTTCHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc------------------cccccc
Confidence 521 111223345566788999999999888743 2 358899988754311 122357
Q ss_pred chhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--------------hHHHHhhcccceeecCCCcccHhhHHHH
Q 005949 515 YSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--------------NFITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--------------~~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
|+.||...+.+.+.+. ..+++|+-.+.|+.+..+. .+...+.+.- .. .-+...+|+|.+
T Consensus 144 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~---pl-~R~g~pedvA~~ 219 (252)
T d1zmta1 144 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT---AL-QRLGTQKELGEL 219 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS---SS-SSCBCHHHHHHH
T ss_pred cccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcC---CC-CCCcCHHHHHHH
Confidence 9999999999888763 2468999999998775442 1111121111 11 124568999999
Q ss_pred HHHHHhcc----CCceeeecCCC
Q 005949 578 SIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 578 ~~~~~~~~----~~g~~ni~~~~ 596 (668)
+++++... .+.++.+.+|-
T Consensus 220 v~fL~S~~s~~iTG~~i~vdGG~ 242 (252)
T d1zmta1 220 VAFLASGSCDYLTGQVFWLAGGF 242 (252)
T ss_dssp HHHHHTTSCGGGTTCEEEESTTC
T ss_pred HHHHhCchhcCCcCCeEEECCCc
Confidence 99998643 45677777763
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.31 E-value=2.7e-11 Score=117.55 Aligned_cols=222 Identities=13% Similarity=0.044 Sum_probs=141.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC--------------------CCcCCCCeEEEEccC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI--------------------PSKASSNFKFVKGDI 66 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~~~~Dl 66 (668)
-.+|||||++.||+++++.|+++ |++|++.++.... ..+.+. .......+....+|+
T Consensus 3 pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv 79 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAA-EANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 79 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH-HHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCCHH-HHHHHHHHHHhhcCCceEEEEeecccccccccccccccccC
Confidence 36899999999999999999999 7888887664321 110000 001112344556778
Q ss_pred CCHHHHHHHhcc-----CCCCEEEEcCccCCcccccC----C--------------hHHHHHHHHHHHHHHHHHHHHc--
Q 005949 67 ASADLVNFLLIT-----ESIDTIMHFAAQTHVDNSFG----N--------------SFEFTKNNIYGTHVLLEACKVT-- 121 (668)
Q Consensus 67 ~d~~~~~~~~~~-----~~~d~Vih~a~~~~~~~~~~----~--------------~~~~~~~nv~~~~~l~~~~~~~-- 121 (668)
++.+.+.++++. .++|++||+||........+ + ....+.+|+.++..+.+++.+.
T Consensus 80 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 159 (284)
T d1e7wa_ 80 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 159 (284)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence 888888776632 47999999999754321111 1 1135678888888888765431
Q ss_pred -------CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeC
Q 005949 122 -------GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYG 191 (668)
Q Consensus 122 -------~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G 191 (668)
+....+|.+||.....+.. ....|+.+|...+.+.+.++.+ +|+++..+.||.+-.
T Consensus 160 ~~~~~~~~~~~~ii~~~s~~~~~~~~--------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 160 GTPAKHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred hhHHHhcCCCCcccccccccccCCcc--------------ceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 2234677777755432221 2346999999999999998765 389999999996433
Q ss_pred CCCCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCccc
Q 005949 192 PNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKERR 257 (668)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 257 (668)
... ..+.........-++ . ..+...+|+|++++.++... ..|+.+.+.+|..++
T Consensus 226 ~~~----~~~~~~~~~~~~~pl--~------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 226 VDD----MPPAVWEGHRSKVPL--Y------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp GGG----SCHHHHHHHHTTCTT--T------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred ccc----CCHHHHHHHHhcCCC--C------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 222 222334444433221 0 12457899999999888643 257889998887554
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.31 E-value=5.5e-12 Score=119.29 Aligned_cols=185 Identities=14% Similarity=0.155 Sum_probs=130.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccC-ChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLE-DCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~-d~~~~~~~l~~~-----~~ 432 (668)
+.|+||||++-||..++++|+++|++| .++..|++ +.++++++++.+ ++
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~i 85 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV 85 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999999999999999999853 34567886 545555554443 68
Q ss_pred CEEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc--------CCcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--------GILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 433 d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--------~~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
|++||+||.. ..+..+..+++|+.|+.++.+++... +.+++++||...+.
T Consensus 86 DilvnnAG~~-------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--------------- 143 (254)
T d1sbya1 86 DILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--------------- 143 (254)
T ss_dssp CEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred CEEEeCCCCC-------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc---------------
Confidence 9999999966 34556778999999999999987542 23578888866441
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccce------eecCCCcccHhhHH
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKV------VNIPNSMTVLDELL 575 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~v~D~a 575 (668)
+.+....|+.||.....+.+.+.. ..++++..+.|+.+..+ +.+.+...... ..........+++|
T Consensus 144 ---~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va 218 (254)
T d1sbya1 144 ---AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP--LVHTFNSWLDVEPRVAELLLSHPTQTSEQCG 218 (254)
T ss_dssp ---CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH--HHHSCCCGGGSCTTHHHHHTTSCCEEHHHHH
T ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc--cccccccchhHHHHHHhccccCCCCCHHHHH
Confidence 122346799999999998887642 46899999999887655 22222111100 01112344588999
Q ss_pred HHHHHHHhccC-CceeeecCC
Q 005949 576 PISIEMAKRNL-RGIWNFTNP 595 (668)
Q Consensus 576 ~~~~~~~~~~~-~g~~ni~~~ 595 (668)
++++.+++... +.++.+.+|
T Consensus 219 ~~~~~~~~~~~tG~vi~vdgG 239 (254)
T d1sbya1 219 QNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETT
T ss_pred HHHHHhhhCCCCCCEEEECCC
Confidence 99998887664 446777665
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.30 E-value=6.8e-12 Score=117.35 Aligned_cols=190 Identities=12% Similarity=0.093 Sum_probs=127.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------cccccccCChhHHHHHhhhc-CCCEEEEcccccCCCCc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------EYGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTGRPNV 447 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------~~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~~~~~ 447 (668)
++++||||++-||+++++.|+++|++| .++..|+++. ++.+++.+ ++|++||.||.......
T Consensus 5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~--~~~~~~~~g~iD~lVnnAG~~~~~~~ 82 (234)
T d1o5ia_ 5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD--LDLLFEKVKEVDILVLNAGGPKAGFF 82 (234)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTC--HHHHHHHSCCCSEEEECCCCCCCBCG
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHH--HHHHHHHhCCCcEEEecccccCCcch
Confidence 579999999999999999999999976 3345677653 44455544 57999999996621111
Q ss_pred -cccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHH
Q 005949 448 -DWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAM 521 (668)
Q Consensus 448 -~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~ 521 (668)
+...++....+++|+.++..+.+++.. .+ .++++++|..... +.+....|+.+|..
T Consensus 83 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~------------------~~~~~~~Y~asKaa 144 (234)
T d1o5ia_ 83 DELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS------------------PIENLYTSNSARMA 144 (234)
T ss_dssp GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------------CCTTBHHHHHHHHH
T ss_pred hhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc------------------cccccccchhHHHH
Confidence 223345566788999999988887743 33 3677887764331 12233579999999
Q ss_pred HHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc----eeecC-CCcccHhhHHHHHHHHHhcc----CCce
Q 005949 522 VEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK----VVNIP-NSMTVLDELLPISIEMAKRN----LRGI 589 (668)
Q Consensus 522 ~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~~v~D~a~~~~~~~~~~----~~g~ 589 (668)
.+.+.+.+. ..+++|+-.+.|+.+..+. ......... ....+ .-+...+|+|.++++++... .+++
T Consensus 145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~--~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~ 222 (234)
T d1o5ia_ 145 LTGFLKTLSFEVAPYGITVNCVAPGWTETER--VKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT 222 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTT--HHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHHHHhcccCeEEeecccCccchhh--hhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcE
Confidence 998877753 2368999999998876653 111111000 00011 13556899999999988543 4567
Q ss_pred eeecCC
Q 005949 590 WNFTNP 595 (668)
Q Consensus 590 ~ni~~~ 595 (668)
+.+.+|
T Consensus 223 i~vDGG 228 (234)
T d1o5ia_ 223 IVVDGG 228 (234)
T ss_dssp EEESTT
T ss_pred EEECcc
Confidence 777665
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=3.2e-12 Score=121.27 Aligned_cols=184 Identities=14% Similarity=0.099 Sum_probs=126.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc--------------------------cccccccCChhHHHHHhhhc-----CC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF--------------------------EYGKGRLEDCSSLIADVQSV-----KP 432 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~-----~~ 432 (668)
+.+|||||++-||.++++.|+++|++| ..+.+|++++++++++++.+ ++
T Consensus 11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~i 90 (257)
T d1xg5a_ 11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGV 90 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 369999999999999999999999853 45678999999888877655 68
Q ss_pred CEEEEcccccCC-CCccccccccccceehhhhhhHHHHHHHH----HcC---CcEEEEecceeEeecCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGR-PNVDWCESHKTDTIRTNVAGTLTLADVCR----DHG---ILMMNYATGCIFEYDAAHPEGSGIGYKE 504 (668)
Q Consensus 433 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~---~~~v~~sS~~vy~~~~~~p~~~~~~~~e 504 (668)
|++||+||.... +-.+...++....+++|+.++.++.+++. +.+ .+++++||.+.+..
T Consensus 91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-------------- 156 (257)
T d1xg5a_ 91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-------------- 156 (257)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--------------
T ss_pred CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC--------------
Confidence 999999997621 11123345556778899999999877763 332 47888888653311
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHhcc-----CeeEeEEeeeecCCCCChhhHHHHhhcccc----eeecCCCcccHhhHH
Q 005949 505 EDTPNFTGSFYSKTKAMVEELLKEYD-----NVCTLRVRMPISSDLNNPRNFITKISRYNK----VVNIPNSMTVLDELL 575 (668)
Q Consensus 505 e~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~v~D~a 575 (668)
.|......|+.+|...+.+.+.+. ..+++++..+-|+.+-.+. ......... ......-+...+|+|
T Consensus 157 --~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~--~~~~~~~~~~~~~~~~~~~r~~~pedvA 232 (257)
T d1xg5a_ 157 --LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF--AFKLHDKDPEKAAATYEQMKCLKPEDVA 232 (257)
T ss_dssp --CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH--HHHHTTTCHHHHHHHHC---CBCHHHHH
T ss_pred --CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh--hhhcChhhHHHHHhcCCCCCCcCHHHHH
Confidence 122223569999999999987653 3468999999887665443 111111100 000112355689999
Q ss_pred HHHHHHHhcc
Q 005949 576 PISIEMAKRN 585 (668)
Q Consensus 576 ~~~~~~~~~~ 585 (668)
+++++++..+
T Consensus 233 ~~v~fL~s~~ 242 (257)
T d1xg5a_ 233 EAVIYVLSTP 242 (257)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHhCCh
Confidence 9999998754
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.30 E-value=6.3e-12 Score=120.50 Aligned_cols=197 Identities=13% Similarity=0.072 Sum_probs=131.5
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcc---------------------------cccccccCChhHHHHHhhhc-----
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------------EYGKGRLEDCSSLIADVQSV----- 430 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------------~~~~~D~~d~~~~~~~l~~~----- 430 (668)
.++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++..
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g 84 (272)
T d1xkqa_ 5 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG 84 (272)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3579999999999999999999999854 35678999999888877754
Q ss_pred CCCEEEEcccccCCCCcc-cccc----ccccceehhhhhhHHHHHHHHH----cCCcEEEEecce-eEeecCCCCCCCCC
Q 005949 431 KPTHVFNAAGVTGRPNVD-WCES----HKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGC-IFEYDAAHPEGSGI 500 (668)
Q Consensus 431 ~~d~Vih~a~~~~~~~~~-~~~~----~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~-vy~~~~~~p~~~~~ 500 (668)
++|++||+||........ ...+ .....+++|+.++..+.+++.. .+...|+++|+. ...
T Consensus 85 ~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~----------- 153 (272)
T d1xkqa_ 85 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ----------- 153 (272)
T ss_dssp CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS-----------
T ss_pred CceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc-----------
Confidence 789999999976211111 1111 2445678999999999988754 344566666642 221
Q ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------H----HHHhhcccceeecC
Q 005949 501 GYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------F----ITKISRYNKVVNIP 565 (668)
Q Consensus 501 ~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~----~~~~~~~~~~~~~~ 565 (668)
+.+....|+.+|...+.+.+.+. ..+++|+..+.|+.+--+.. . .............
T Consensus 154 -------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl- 225 (272)
T d1xkqa_ 154 -------AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI- 225 (272)
T ss_dssp -------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-
T ss_pred -------CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-
Confidence 11223579999999999887764 23689999999988765431 0 0001111111111
Q ss_pred CCcccHhhHHHHHHHHHhc---c--CCceeeecCCCcc
Q 005949 566 NSMTVLDELLPISIEMAKR---N--LRGIWNFTNPGVV 598 (668)
Q Consensus 566 ~~~~~v~D~a~~~~~~~~~---~--~~g~~ni~~~~~~ 598 (668)
.-+...+|+|+++++++.. . .+.++.+.+|..+
T Consensus 226 gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 226 GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 1244578999999998842 2 4557777776443
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.29 E-value=6.6e-12 Score=120.40 Aligned_cols=195 Identities=12% Similarity=0.074 Sum_probs=130.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.. +
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 84 (274)
T d1xhla_ 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGK 84 (274)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999854 34668999999888777654 6
Q ss_pred CCEEEEcccccCCCCccc---cccccccceehhhhhhHHHHHHHHHc----CC-cEEEEecceeEeecCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNVDW---CESHKTDTIRTNVAGTLTLADVCRDH----GI-LMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~~~---~~~~~~~~~~~Nv~~~~~ll~~~~~~----~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
+|++||+||......... ..++....+++|+.++..+.+++..+ +. .++++||...+.
T Consensus 85 iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-------------- 150 (274)
T d1xhla_ 85 IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-------------- 150 (274)
T ss_dssp CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS--------------
T ss_pred ceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc--------------
Confidence 899999999652111111 22345677889999999999888543 33 444444433221
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhH-----------HHHhhcc-cceeecCCCc
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNF-----------ITKISRY-NKVVNIPNSM 568 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~-----------~~~~~~~-~~~~~~~~~~ 568 (668)
+.+....|+.+|...+.+.+... ..+++|+..+-|+.+.-|..- ....+.. ...... .-+
T Consensus 151 ----~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-gR~ 225 (274)
T d1xhla_ 151 ----AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHC 225 (274)
T ss_dssp ----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSC
T ss_pred ----cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-CCC
Confidence 11223579999999999887753 236899999999988655310 0011110 010111 124
Q ss_pred ccHhhHHHHHHHHHhc---c--CCceeeecCCCc
Q 005949 569 TVLDELLPISIEMAKR---N--LRGIWNFTNPGV 597 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~---~--~~g~~ni~~~~~ 597 (668)
...+|+|+++++++.. . .+.++.+.+|..
T Consensus 226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 4689999999998842 2 456788777643
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=8.4e-12 Score=117.42 Aligned_cols=193 Identities=13% Similarity=0.067 Sum_probs=132.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc-------------------ccccccCChhHHHHHhhhc-CCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE-------------------YGKGRLEDCSSLIADVQSV-KPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~-------------------~~~~D~~d~~~~~~~l~~~-~~d~Vih~a~~~~ 443 (668)
++++||||++-||+++++.|+++|++|. ....|+.+.+.++...+.+ ++|++||+||...
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~ 86 (245)
T d2ag5a1 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH 86 (245)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccccC
Confidence 5799999999999999999999999752 3345666666666666654 6899999999872
Q ss_pred CCC-ccccccccccceehhhhhhHHHHHHHHHc-----CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 444 RPN-VDWCESHKTDTIRTNVAGTLTLADVCRDH-----GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 444 ~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
... .+.+.++....+++|+.++..+.+++..+ +.+++++||...- ..+.+....|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-----------------~~~~~~~~~Y~~ 149 (245)
T d2ag5a1 87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS-----------------VKGVVNRCVYST 149 (245)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-----------------TBCCTTBHHHHH
T ss_pred CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc-----------------cCCccchhHHHH
Confidence 111 11233455667889999999999887542 3378888875420 012233467999
Q ss_pred hHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------------HHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 518 TKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 518 sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
+|...+.+++.++ ...++|+..+.|+.+..|.. +...+... .. -.-+...+|+|+++..++
T Consensus 150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---~p-l~R~~~pedva~~v~fL~ 225 (245)
T d2ag5a1 150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR---QK-TGRFATAEEIAMLCVYLA 225 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT---CT-TSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhc---CC-CCCCcCHHHHHHHHHHHh
Confidence 9999999888864 24689999999988766541 11111111 00 113556899999999999
Q ss_pred hcc----CCceeeecCCCc
Q 005949 583 KRN----LRGIWNFTNPGV 597 (668)
Q Consensus 583 ~~~----~~g~~ni~~~~~ 597 (668)
... .+.++.+.+|..
T Consensus 226 s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 226 SDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp SGGGTTCCSCEEEECTTGG
T ss_pred ChhhCCCcCceEEeCCCcC
Confidence 653 456777777643
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.29 E-value=4.8e-12 Score=120.56 Aligned_cols=192 Identities=12% Similarity=0.082 Sum_probs=130.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+.+|||||++-||.++++.|+++|++| ..+.+|++|++++++.++.. ++|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 86 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD 86 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 579999999999999999999999854 45678999998888777654 689
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecc-eeEeecCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATG-CIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~-~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
++||+||....... ....+.....+++|+.+..++++++..+ +-..++++|+ ..+. +
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~------------------~ 148 (259)
T d1ja9a_ 87 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT------------------G 148 (259)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC------------------S
T ss_pred EEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc------------------C
Confidence 99999997721111 1234455677889999999999998764 2244555443 2221 1
Q ss_pred CCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc----------------eeecC-CCc
Q 005949 509 NFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK----------------VVNIP-NSM 568 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~----------------~~~~~-~~~ 568 (668)
.+....|+.+|...+.+++.+. ...++|+-.+.|+.+.-+. ......... ....+ .-+
T Consensus 149 ~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~ 226 (259)
T d1ja9a_ 149 IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM--FDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRI 226 (259)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH--HHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChh--hhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCC
Confidence 1223579999999998887753 2468999999998876542 111110000 00011 135
Q ss_pred ccHhhHHHHHHHHHhcc----CCceeeecCC
Q 005949 569 TVLDELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 569 ~~v~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
...+|+|+++++++... .+.++++-+|
T Consensus 227 g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 227 GYPADIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 56899999999999653 3456666554
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.28 E-value=4.8e-12 Score=120.54 Aligned_cols=192 Identities=10% Similarity=0.010 Sum_probs=129.7
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+| -||+++++.|+++|++| ..+..|++|+++++++++.. ++|
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 88 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLD 88 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCce
Confidence 4799999998 69999999999999865 35678999998888877653 689
Q ss_pred EEEEcccccCC-----CCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGR-----PNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 434 ~Vih~a~~~~~-----~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
++||+|+.... +..+....+....+++|+.++..+.+++... +..++++||.....
T Consensus 89 ilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~---------------- 152 (256)
T d1ulua_ 89 YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK---------------- 152 (256)
T ss_dssp EEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----------------
T ss_pred EEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC----------------
Confidence 99999986510 0011112233456789999999999887643 33678888765431
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh--------hHHHHhhcccceeecCCCcccHhhH
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR--------NFITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+.+....|+.+|...+.+.+.+.. .+++|+-.+.|+.+..+. .+...+.+.-+ . .-+...+|+
T Consensus 153 --~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~p---l-~R~~~pedv 226 (256)
T d1ulua_ 153 --VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAP---L-RRNITQEEV 226 (256)
T ss_dssp --BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHST---T-SSCCCHHHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCC---C-CCCcCHHHH
Confidence 112336799999999998887632 368999999998776543 11122221111 1 124458999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCc
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|+++.+++... .+.++.+.+|..
T Consensus 227 A~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 227 GNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhCCccCCeEEECcCEe
Confidence 99999998643 455777766643
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=7.7e-12 Score=120.61 Aligned_cols=190 Identities=14% Similarity=0.085 Sum_probs=128.4
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcc------------------------------cccccccCChhHHHHHhhhc---C
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPF------------------------------EYGKGRLEDCSSLIADVQSV---K 431 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v------------------------------~~~~~D~~d~~~~~~~l~~~---~ 431 (668)
-||||||++-||+++++.|+++|.++ ..+.+|++|++++.++++.. .
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 46899999999999999999998642 34568999999998887765 6
Q ss_pred CCEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHH----HcC-CcEEEEecceeEeecCCCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCR----DHG-ILMMNYATGCIFEYDAAHPEGSGIGYKEE 505 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~-~~~v~~sS~~vy~~~~~~p~~~~~~~~ee 505 (668)
+|+++|.|+....... ....++....+++|+.|+.++.+++. +.+ .++|++||...+.
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~---------------- 147 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM---------------- 147 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS----------------
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC----------------
Confidence 8999999997722121 12334556678899999999988863 344 4888888875431
Q ss_pred CCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccc-------------e-------e
Q 005949 506 DTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNK-------------V-------V 562 (668)
Q Consensus 506 ~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-------------~-------~ 562 (668)
+.+....|+.||...+.+.+.+. ..+++++..+.|+.+--+. ......... . .
T Consensus 148 --~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T d1jtva_ 148 --GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF--MEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK 223 (285)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---------CCHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChH--HHHhccCHHHHhhccchhHHHHHHHHHHHHh
Confidence 12234679999999998887763 2468999999998775431 111111000 0 0
Q ss_pred e-cCCCcccHhhHHHHHHHHHhccCCceeeecC
Q 005949 563 N-IPNSMTVLDELLPISIEMAKRNLRGIWNFTN 594 (668)
Q Consensus 563 ~-~~~~~~~v~D~a~~~~~~~~~~~~g~~ni~~ 594 (668)
. ....+...+|+|++++.+++.+.+..+.+..
T Consensus 224 ~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g 256 (285)
T d1jtva_ 224 QVFREAAQNPEEVAEVFLTALRAPKPTLRYFTT 256 (285)
T ss_dssp HHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred hhhcccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence 0 0001334689999999999876544444443
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.27 E-value=7.1e-12 Score=121.51 Aligned_cols=184 Identities=11% Similarity=0.101 Sum_probs=124.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc------------------------------cccccCChhHHHHHhhh----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY------------------------------GKGRLEDCSSLIADVQS---- 429 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~------------------------------~~~D~~d~~~~~~~l~~---- 429 (668)
+.++||||++.||+.+++.|+++|++|.+ ...|++|.+++++.++.
T Consensus 8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~ 87 (302)
T d1gz6a_ 8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDT 87 (302)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 47999999999999999999999987633 22456666665555443
Q ss_pred c-CCCEEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHHH----cC-CcEEEEecceeEeecCCCCCCCCCCC
Q 005949 430 V-KPTHVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCRD----HG-ILMMNYATGCIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 430 ~-~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~-~~~v~~sS~~vy~~~~~~p~~~~~~~ 502 (668)
+ ++|++||.||...... .+...++....+++|+.|+.++.+++.. .+ .++|++||...+.+.
T Consensus 88 ~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~----------- 156 (302)
T d1gz6a_ 88 FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN----------- 156 (302)
T ss_dssp TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC-----------
Confidence 2 6899999999873111 1223345567889999999999998743 34 488999887654221
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--HHHHhhcccceeecCCCcccHhhHHHH
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--FITKISRYNKVVNIPNSMTVLDELLPI 577 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~v~D~a~~ 577 (668)
+....|+.||...+.+.+.+. ..+++++..+-|+.+--+.. +-..+. .....+|+|.+
T Consensus 157 -------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~~~~----------~~~~PedvA~~ 219 (302)
T d1gz6a_ 157 -------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLV----------EALKPEYVAPL 219 (302)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCHHHH----------HHSCGGGTHHH
T ss_pred -------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcHhhH----------hcCCHHHHHHH
Confidence 223679999999999887753 34689999999976543220 001111 11236899999
Q ss_pred HHHHHhcc---CCceeeecCC
Q 005949 578 SIEMAKRN---LRGIWNFTNP 595 (668)
Q Consensus 578 ~~~~~~~~---~~g~~ni~~~ 595 (668)
++++.... .++++.+.+|
T Consensus 220 v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 220 VLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp HHHHTSTTCCCCSCEEEEETT
T ss_pred HHHHcCCCcCCCCcEEEeCCC
Confidence 99987532 3445555443
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=5.5e-12 Score=118.24 Aligned_cols=177 Identities=12% Similarity=0.032 Sum_probs=123.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc------------------------cccccccCChhHHHHHhhhc-----CCCE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF------------------------EYGKGRLEDCSSLIADVQSV-----KPTH 434 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v------------------------~~~~~D~~d~~~~~~~l~~~-----~~d~ 434 (668)
+.++||||++-||++++++|+++|.+| ..+.+|++|+++++++++.. ++|+
T Consensus 8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idi 87 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI 87 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCce
Confidence 479999999999999999999999853 46789999999888877644 6999
Q ss_pred EEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----cCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 435 VFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 435 Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+||+||....... +...+..+..+++|+.|+.++.+++-. .+. ++|++||...+.+
T Consensus 88 linnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~------------------ 149 (244)
T d1yb1a_ 88 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS------------------ 149 (244)
T ss_dssp EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC------------------
T ss_pred eEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC------------------
Confidence 9999998721111 122344567889999999999887643 343 7888888765421
Q ss_pred CCCCCcchhhHHHHHHHHHhccC------eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN------VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~------~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
.+....|+.||...+.+.+.+.. ..|+++..+.|+.+-- .+.+... ... ......+|+|+.++..+
T Consensus 150 ~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T------~~~~~~~-~~~-~~~~~pe~va~~i~~~~ 221 (244)
T d1yb1a_ 150 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT------GFIKNPS-TSL-GPTLEPEEVVNRLMHGI 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH------CSTTCTH-HHH-CCCCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCC------hhhhCcC-ccc-cCCCCHHHHHHHHHHHH
Confidence 12236799999999988877642 2479999998863311 1121111 111 12334689999998887
Q ss_pred hccC
Q 005949 583 KRNL 586 (668)
Q Consensus 583 ~~~~ 586 (668)
..+.
T Consensus 222 ~~~~ 225 (244)
T d1yb1a_ 222 LTEQ 225 (244)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 7643
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.27 E-value=4.7e-12 Score=121.03 Aligned_cols=182 Identities=14% Similarity=0.094 Sum_probs=126.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCc-c---------------------------cccccccCChhHHHHHhhhc----CC
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIP-F---------------------------EYGKGRLEDCSSLIADVQSV----KP 432 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~-v---------------------------~~~~~D~~d~~~~~~~l~~~----~~ 432 (668)
.++||||+|.||.++++.|.++|++ | .++.+|++|++++.++++.+ +.
T Consensus 11 t~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i 90 (259)
T d2fr1a1 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPL 90 (259)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccc
Confidence 5999999999999999999999974 2 34567999999998887765 47
Q ss_pred CEEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHcCC-cEEEEecceeEeecCCCCCCCCCCCCCCCCCCC
Q 005949 433 THVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDHGI-LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNF 510 (668)
Q Consensus 433 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~ 510 (668)
|.|||++|....... +....+....+++|+.++.+|.++++..+. .++++||...+.+ .+
T Consensus 91 ~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g------------------~~ 152 (259)
T d2fr1a1 91 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG------------------AP 152 (259)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC------------------CT
T ss_pred cccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccC------------------Cc
Confidence 899999997721111 112233455688999999999999887765 6778888765422 12
Q ss_pred CCCcchhhHHHHHHHHHhccCeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhccCC
Q 005949 511 TGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLR 587 (668)
Q Consensus 511 ~~~~Y~~sK~~~E~~~~~~~~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~~~ 587 (668)
....|+.+|...+.+...+.. .|+++..+.++.+.++.. ....... .....+...+..+++++++..++.+...
T Consensus 153 ~~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~-~~~~~~~-~~~~~G~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 153 GLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGM-AEGPVAD-RFRRHGVIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp TCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC--------------CTTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred ccHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCcc-ccchHHH-HHHhcCCCCCCHHHHHHHHHHHHhCCCc
Confidence 236799999999998877644 588999998887665531 1111100 0001122345688999999999987643
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.25 E-value=2.8e-10 Score=110.96 Aligned_cols=227 Identities=15% Similarity=0.040 Sum_probs=140.8
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHHhCCCCEEEEEcCCCcc-----------CCccccCCCcCCCC---eEEEEccC-
Q 005949 4 YTPKNILITGAAG--FIASHVCNRLIRNYPEYKIVVLDKLDYC-----------SNLKNLIPSKASSN---FKFVKGDI- 66 (668)
Q Consensus 4 ~~~~~vLVtGgtG--~iG~~l~~~L~~~g~~~~v~~~~r~~~~-----------~~~~~~~~~~~~~~---~~~~~~Dl- 66 (668)
+++|++|||||+| .||+++++.|+++ |.+|++.+|.... .............. +..+..++
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 5689999999987 8999999999999 7888877663210 00000001101111 12222222
Q ss_pred --------------------CCHHHH-HHHhcc-CCCCEEEEcCccCC------cccccCChHHHHHHHHHHHHHHHHHH
Q 005949 67 --------------------ASADLV-NFLLIT-ESIDTIMHFAAQTH------VDNSFGNSFEFTKNNIYGTHVLLEAC 118 (668)
Q Consensus 67 --------------------~d~~~~-~~~~~~-~~~d~Vih~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~ 118 (668)
.+.+.+ +.+.++ .++|++||+||... .+.+.+++...+++|+.+...+.+++
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 163 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence 222222 222221 47999999998643 12233446678899999999999877
Q ss_pred HHcCC-CcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH----hcCCCEEEEeeCceeCCC
Q 005949 119 KVTGQ-IRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGR----SYGLPVITTRGNNVYGPN 193 (668)
Q Consensus 119 ~~~~~-~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~----~~~~~~~ilR~~~v~G~~ 193 (668)
..... -...+.+++.+...... .....|+.+|...+.+.+..+. ++++++..+.||.+..+.
T Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~ 230 (297)
T d1d7oa_ 164 LPIMNPGGASISLTYIASERIIP-------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCT-------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred HHHhhcCCcceeeeehhhccccc-------------ccccceecccccccccccccchhccccceEEecccccccccchh
Confidence 65321 13455666544322211 1244699999998888776443 458999999999998887
Q ss_pred CCCCChHHHHHHHHHcCCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCC
Q 005949 194 QFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKK 254 (668)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~ 254 (668)
.........+.+...+.-++. .+...+|++.+++.++... -.|+++.+.+|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 231 AKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp SSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 644444445555544433221 2457899999999888542 257888888775
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.25 E-value=1.2e-11 Score=118.80 Aligned_cols=194 Identities=13% Similarity=0.096 Sum_probs=134.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||++-||+++++.|+++|++| ..+.+|++|++++.+.++.. ++|
T Consensus 19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 98 (272)
T d1g0oa_ 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD 98 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999999999854 34568999998888877654 689
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPN 509 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~ 509 (668)
++||.++....... +....+....+++|+.++..+++++..+ +-+.++++|+.... .+.
T Consensus 99 ilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~-----------------~~~ 161 (272)
T d1g0oa_ 99 IVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------------KAV 161 (272)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------------SSC
T ss_pred ccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc-----------------ccc
Confidence 99999997721111 2233455567889999999999999764 33566666643210 112
Q ss_pred CCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccc-----e-----------eecC-CCcc
Q 005949 510 FTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNK-----V-----------VNIP-NSMT 569 (668)
Q Consensus 510 ~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~-----~-----------~~~~-~~~~ 569 (668)
+....|+.+|...+.+.+.+.. ..++|+-.+.|+.+-.+. ...+..... . ...+ .-+.
T Consensus 162 ~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~ 239 (272)
T d1g0oa_ 162 PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM--YHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVG 239 (272)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH--HHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCB
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH--HHHHHHhhhhcccccchHHHHHHHHHccCCCCCCc
Confidence 2336799999999998877532 368999999999887653 222211100 0 0011 2456
Q ss_pred cHhhHHHHHHHHHhcc----CCceeeecCCC
Q 005949 570 VLDELLPISIEMAKRN----LRGIWNFTNPG 596 (668)
Q Consensus 570 ~v~D~a~~~~~~~~~~----~~g~~ni~~~~ 596 (668)
..+|+|.++..++... .+.++.+.+|.
T Consensus 240 ~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 240 LPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 7899999999999643 34566666653
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.25 E-value=2e-11 Score=117.13 Aligned_cols=193 Identities=18% Similarity=0.154 Sum_probs=126.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------cccccccCChhHHHHHhhhc-----CCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------EYGKGRLEDCSSLIADVQSV-----KPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------~~~~~D~~d~~~~~~~l~~~-----~~d~Vih 437 (668)
++++||||++.||+++++.|+++|++| ..+.+|++++++++++++.. ++|++||
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvn 85 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIP 85 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccc
Confidence 579999999999999999999999864 45678999998887776654 7899999
Q ss_pred cccccCCCCccc--cc----cccccceehhhhhhHHHHHHHH----HcCCcEEEEecceeEeecCCCCCCCCCCCCCCCC
Q 005949 438 AAGVTGRPNVDW--CE----SHKTDTIRTNVAGTLTLADVCR----DHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDT 507 (668)
Q Consensus 438 ~a~~~~~~~~~~--~~----~~~~~~~~~Nv~~~~~ll~~~~----~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~ 507 (668)
+||......... .. .+....+++|+.++..+.+++. +.+..+|+++|+..+.
T Consensus 86 nAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~------------------ 147 (276)
T d1bdba_ 86 NAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY------------------ 147 (276)
T ss_dssp CCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS------------------
T ss_pred cccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc------------------
Confidence 999752111111 01 1235668899999999988874 4456778887765331
Q ss_pred CCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh------hHHHHhhccccee-----ecC-CCcccHh
Q 005949 508 PNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVV-----NIP-NSMTVLD 572 (668)
Q Consensus 508 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~-----~~~-~~~~~v~ 572 (668)
+.+....|+.+|...+.+.+.+.. .. +|+-.+.|+.+.-+. ............. ..+ .-+...+
T Consensus 148 ~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 226 (276)
T d1bdba_ 148 PNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE 226 (276)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH
Confidence 112235799999999988777531 23 899999998775431 0000000000000 011 1244578
Q ss_pred hHHHHHHHHHh-c--c--CCceeeecCC
Q 005949 573 ELLPISIEMAK-R--N--LRGIWNFTNP 595 (668)
Q Consensus 573 D~a~~~~~~~~-~--~--~~g~~ni~~~ 595 (668)
|+|.+++.++. . . .+.++++.+|
T Consensus 227 eva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 227 EYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp GGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred HHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 99999988773 2 2 4667887765
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.25 E-value=1.2e-11 Score=118.11 Aligned_cols=194 Identities=13% Similarity=0.102 Sum_probs=128.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc---------------------------cccccccCChhHHHHHhhhc-----C
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF---------------------------EYGKGRLEDCSSLIADVQSV-----K 431 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v---------------------------~~~~~D~~d~~~~~~~l~~~-----~ 431 (668)
+.++||||++-||+++++.|+++|++| ..+.+|++|+++++++++.+ +
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 85 (264)
T d1spxa_ 6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 85 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999854 35678999999888877765 7
Q ss_pred CCEEEEcccccCCCCcc-----ccccccccceehhhhhhHHHHHHHHH----cCCcEEEEeccee-EeecCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNVD-----WCESHKTDTIRTNVAGTLTLADVCRD----HGILMMNYATGCI-FEYDAAHPEGSGIG 501 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~~-----~~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~~~v~~sS~~v-y~~~~~~p~~~~~~ 501 (668)
+|++||+||........ ...++....+++|+.++.++.+++.. .+...|+++|+.. +
T Consensus 86 iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~------------- 152 (264)
T d1spxa_ 86 LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL------------- 152 (264)
T ss_dssp CCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS-------------
T ss_pred CCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc-------------
Confidence 89999999965110000 12234456788999999999888754 3456777766532 2
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh------------HHHHhhcccceeecCC
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN------------FITKISRYNKVVNIPN 566 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~------------~~~~~~~~~~~~~~~~ 566 (668)
.+.+....|+.||...+.+.+.+. ..+++|+..+.|+.+.-+.. +............ -.
T Consensus 153 -----~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P-l~ 226 (264)
T d1spxa_ 153 -----HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP-AG 226 (264)
T ss_dssp -----SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT-TS
T ss_pred -----ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCC-CC
Confidence 111223579999999999887753 24689999999987754421 0000000000001 11
Q ss_pred CcccHhhHHHHHHHHHhc---c--CCceeeecCCC
Q 005949 567 SMTVLDELLPISIEMAKR---N--LRGIWNFTNPG 596 (668)
Q Consensus 567 ~~~~v~D~a~~~~~~~~~---~--~~g~~ni~~~~ 596 (668)
-+...+|+|+++++++.. . .+.++.+.+|.
T Consensus 227 R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 227 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 244579999999998842 2 45577776654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.22 E-value=1.1e-11 Score=116.26 Aligned_cols=186 Identities=13% Similarity=0.015 Sum_probs=123.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc--------------ccccCChhHHH-------HHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG--------------KGRLEDCSSLI-------ADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~--------------~~D~~d~~~~~-------~~l~~~~~d~Vih~a~~~ 442 (668)
++|+||||+|.||+++++.|+++|++|..+ ..|..+.+..+ +.+...++|++||+||..
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~ 82 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGW 82 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCccc
Confidence 589999999999999999999999977432 22232222222 222222579999999843
Q ss_pred C--CCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 443 G--RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 443 ~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
. .+......++....+++|+.++.++.+++..+ +.+++++||...+. +.+....|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------------~~~~~~~Y~a 144 (236)
T d1dhra_ 83 AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD------------------GTPGMIGYGM 144 (236)
T ss_dssp CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHHH
T ss_pred ccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC------------------CccCCcccHH
Confidence 1 11111223445567899999999999998764 44788888865431 1122367999
Q ss_pred hHHHHHHHHHhccC-----eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc----CCc
Q 005949 518 TKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN----LRG 588 (668)
Q Consensus 518 sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g 588 (668)
||...+.+.+.+.. ..++++..+.|+.+.-|. .+...... -...++..+++|+.+..++... .++
T Consensus 145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~--~~~~~~~~----~~~~~~~pe~va~~~~~l~s~~~~~i~G~ 218 (236)
T d1dhra_ 145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM--NRKSMPEA----DFSSWTPLEFLVETFHDWITGNKRPNSGS 218 (236)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH--HHHHSTTS----CGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc--chhhCccc----hhhcCCCHHHHHHHHHHHhCCCccCCCCC
Confidence 99999999998743 257999999998877653 22222111 1124566899999999998653 345
Q ss_pred eeeec
Q 005949 589 IWNFT 593 (668)
Q Consensus 589 ~~ni~ 593 (668)
.+.+.
T Consensus 219 ~i~v~ 223 (236)
T d1dhra_ 219 LIQVV 223 (236)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 55553
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.20 E-value=1.9e-10 Score=110.20 Aligned_cols=220 Identities=17% Similarity=0.137 Sum_probs=136.4
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcccc---CCCcCCCCeEEEEccCCC----HHHHHHHh----
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL---IPSKASSNFKFVKGDIAS----ADLVNFLL---- 76 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d----~~~~~~~~---- 76 (668)
..|||||++.||+++++.|+++ |++|++.+|..... .+.+ ...........+..|..+ .+.+.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGA-AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 79 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHH-HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHH
Confidence 5799999999999999999999 78999999864321 1111 111223456667766655 23333322
Q ss_pred cc-CCCCEEEEcCccCCcccc---------------cCChHHHHHHHHHHHHHHHHHHHHc--------CCCcEEEEEcC
Q 005949 77 IT-ESIDTIMHFAAQTHVDNS---------------FGNSFEFTKNNIYGTHVLLEACKVT--------GQIRRFIHVST 132 (668)
Q Consensus 77 ~~-~~~d~Vih~a~~~~~~~~---------------~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~v~~SS 132 (668)
++ .++|++||+||....... .......+..|+.+........... .....++.+||
T Consensus 80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (266)
T d1mxha_ 80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 159 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence 11 479999999997542111 0112234455555555444433321 11245566666
Q ss_pred ccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHc
Q 005949 133 DEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR 209 (668)
Q Consensus 133 ~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~ 209 (668)
........ ....|+.+|...+.+.+..+.+ +|+++..+.||.+..+...+ ........+
T Consensus 160 ~~~~~~~~--------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~----~~~~~~~~~ 221 (266)
T d1mxha_ 160 AMTDLPLP--------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP----QETQEEYRR 221 (266)
T ss_dssp GGGGSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC----HHHHHHHHT
T ss_pred ccccccCc--------------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC----HHHHHHHHh
Confidence 54432222 2456999999999999988765 48999999999988765432 233333333
Q ss_pred CCCceeecCCCceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCCCcc
Q 005949 210 GLPLPIHGDGSNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTKKER 256 (668)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~~~~ 256 (668)
.-++ + +.+...+|++.+++.++... -.|+++.+.+|..+
T Consensus 222 ~~pl---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 222 KVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp TCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cCCC---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 3221 1 12357899999999998653 36788999887543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.18 E-value=2.3e-11 Score=113.99 Aligned_cols=176 Identities=18% Similarity=0.152 Sum_probs=115.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc--------------ccccCChhH-------HHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG--------------KGRLEDCSS-------LIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~--------------~~D~~d~~~-------~~~~l~~~~~d~Vih~a~~~ 442 (668)
.||+||||+|.||+++++.|+++|++|..+ .+|..+.+. +...++.-++|+|||+||..
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~ 82 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGW 82 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccc
Confidence 489999999999999999999999987433 233332222 22222223679999999964
Q ss_pred C--CCCccccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchh
Q 005949 443 G--RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSK 517 (668)
Q Consensus 443 ~--~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~ 517 (668)
. .+......+..+..+++|+.++..+.+++..+ +.+++++||...+. +.+....|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~------------------~~~~~~~Y~a 144 (235)
T d1ooea_ 83 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------------------PTPSMIGYGM 144 (235)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------------------CCTTBHHHHH
T ss_pred ccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC------------------CcccccchHH
Confidence 1 11111112334556889999999999988764 34677777765331 1122368999
Q ss_pred hHHHHHHHHHhccC-----eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 518 TKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 518 sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
||...+.+.+.+.. ..++++..+.|+.+.-+ +.+....... ...++..+|+++.++..+.
T Consensus 145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~--~~~~~~~~~~----~~~~~~~~~va~~~~~~l~ 209 (235)
T d1ooea_ 145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP--MNRKWMPNAD----HSSWTPLSFISEHLLKWTT 209 (235)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH--HHHHHSTTCC----GGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc--chhhhCcCCc----cccCCCHHHHHHHHHHHhc
Confidence 99999999888632 24678888888877654 3333332211 1245668899999876554
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.13 E-value=5.8e-11 Score=113.00 Aligned_cols=182 Identities=13% Similarity=0.108 Sum_probs=124.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHH---cCCcc--------------------------cccccccCChhHHHHHhhhc----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEK---EGIPF--------------------------EYGKGRLEDCSSLIADVQSV---- 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~---~g~~v--------------------------~~~~~D~~d~~~~~~~l~~~---- 430 (668)
+.++||||++.||..+++.|.+ +|++| ..+.+|++++++++++++..
T Consensus 7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~ 86 (259)
T d1oaaa_ 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence 3579999999999999999975 67643 45778999999888776432
Q ss_pred -----CCCEEEEcccccCCCCcc-c---cccccccceehhhhhhHHHHHHHHHc----C---CcEEEEecceeEeecCCC
Q 005949 431 -----KPTHVFNAAGVTGRPNVD-W---CESHKTDTIRTNVAGTLTLADVCRDH----G---ILMMNYATGCIFEYDAAH 494 (668)
Q Consensus 431 -----~~d~Vih~a~~~~~~~~~-~---~~~~~~~~~~~Nv~~~~~ll~~~~~~----~---~~~v~~sS~~vy~~~~~~ 494 (668)
.+|+++|.||..+..... . ..++....+++|+.++..+.+++..+ + .+++++||...+
T Consensus 87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~------ 160 (259)
T d1oaaa_ 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL------ 160 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT------
T ss_pred hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc------
Confidence 467999999975211111 1 12334567889999999999998653 2 256777776533
Q ss_pred CCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc-CeeEeEEeeeecCCCCChhhHHHHhhcccc---------eeec
Q 005949 495 PEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD-NVCTLRVRMPISSDLNNPRNFITKISRYNK---------VVNI 564 (668)
Q Consensus 495 p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~---------~~~~ 564 (668)
.+.+....|+.||...+.+.+.+. +..++++..+.|+.+..+. ......... ....
T Consensus 161 ------------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~--~~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T d1oaaa_ 161 ------------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM--QQLARETSKDPELRSKLQKLKS 226 (259)
T ss_dssp ------------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH--HHHHHHHCSCHHHHHHHHHHHH
T ss_pred ------------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH--HHHhhhcCCCHHHHHHHHhcCC
Confidence 122234689999999999988862 3568999999998887663 111111100 0001
Q ss_pred CCCcccHhhHHHHHHHHHhcc
Q 005949 565 PNSMTVLDELLPISIEMAKRN 585 (668)
Q Consensus 565 ~~~~~~v~D~a~~~~~~~~~~ 585 (668)
..-+...+|+|++++.++...
T Consensus 227 ~~r~~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 227 DGALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp TTCSBCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHhhhc
Confidence 123456889999999888653
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.13 E-value=8.9e-11 Score=111.07 Aligned_cols=191 Identities=14% Similarity=0.009 Sum_probs=119.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-----------------------ccccccccCChhHHHHHhhhc-------CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-----------------------FEYGKGRLEDCSSLIADVQSV-------KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-----------------------v~~~~~D~~d~~~~~~~l~~~-------~~d 433 (668)
+.||||||++-||.+++++|+++|+. +.++.+|++|+++++++++.+ ++|
T Consensus 4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~id 83 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS 83 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 47999999999999999999999952 356778999998877665533 489
Q ss_pred EEEEcccccCCCC--ccccccccccceehhhhhhHHHHHHHHHc----------------CCcEEEEecceeEeecCCCC
Q 005949 434 HVFNAAGVTGRPN--VDWCESHKTDTIRTNVAGTLTLADVCRDH----------------GILMMNYATGCIFEYDAAHP 495 (668)
Q Consensus 434 ~Vih~a~~~~~~~--~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----------------~~~~v~~sS~~vy~~~~~~p 495 (668)
++||+||...... .....++....+++|+.|+.++.+++..+ ....+.+||...+-...
T Consensus 84 ilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~--- 160 (250)
T d1yo6a1 84 LLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN--- 160 (250)
T ss_dssp EEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC---
T ss_pred EEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC---
Confidence 9999999762111 11222344567899999999998886421 11344444433221110
Q ss_pred CCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHh
Q 005949 496 EGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLD 572 (668)
Q Consensus 496 ~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 572 (668)
....+..+...|+.||.....+.+.+. ...++++..+.|+.+--+. .. .......+
T Consensus 161 --------~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m------~~-------~~~~~~~e 219 (250)
T d1yo6a1 161 --------TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL------GG-------KNAALTVE 219 (250)
T ss_dssp --------CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------H
T ss_pred --------cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC------CC-------CCCCCCHH
Confidence 011122333569999999998887753 3468999999998664221 10 01123467
Q ss_pred hHHHHHHHHHhcc---CCceeeecCCCcc
Q 005949 573 ELLPISIEMAKRN---LRGIWNFTNPGVV 598 (668)
Q Consensus 573 D~a~~~~~~~~~~---~~g~~ni~~~~~~ 598 (668)
+.++.++..+.+. ..|.|-.-++++.
T Consensus 220 ~~a~~~~~~~~~~~~~~sG~f~~~~g~p~ 248 (250)
T d1yo6a1 220 QSTAELISSFNKLDNSHNGRFFMRNLKPY 248 (250)
T ss_dssp HHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred HHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence 8888888888653 4455544444443
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.13 E-value=5e-11 Score=112.67 Aligned_cols=152 Identities=15% Similarity=0.037 Sum_probs=106.1
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHH---cCCc-----------------------ccccccccCChhHHHHHhhh------
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEK---EGIP-----------------------FEYGKGRLEDCSSLIADVQS------ 429 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~---~g~~-----------------------v~~~~~D~~d~~~~~~~l~~------ 429 (668)
+|++||||||++-||..+++.|++ +|++ +.++.+|++|+++++++++.
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 366899999999999999999974 6763 35678999999888776553
Q ss_pred -cCCCEEEEcccccCCCCc--cccccccccceehhhhhhHHHHHHHHHc----------------CCcEEEEecceeEee
Q 005949 430 -VKPTHVFNAAGVTGRPNV--DWCESHKTDTIRTNVAGTLTLADVCRDH----------------GILMMNYATGCIFEY 490 (668)
Q Consensus 430 -~~~d~Vih~a~~~~~~~~--~~~~~~~~~~~~~Nv~~~~~ll~~~~~~----------------~~~~v~~sS~~vy~~ 490 (668)
-++|++||.||....... +....+....+++|+.|+..+.+++..+ +.+++++||....
T Consensus 81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~-- 158 (248)
T d1snya_ 81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS-- 158 (248)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--
T ss_pred cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--
Confidence 268999999997621111 1122334567889999999998886421 2367778775422
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCCh
Q 005949 491 DAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNP 548 (668)
Q Consensus 491 ~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~ 548 (668)
... .+.+....|+.||.....+.+.+. ...++++..+.|+.+--+
T Consensus 159 ~~~-------------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 159 IQG-------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp STT-------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred cCC-------------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 111 122233579999999998877753 345899999999876543
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.13 E-value=1.6e-10 Score=112.35 Aligned_cols=192 Identities=13% Similarity=0.023 Sum_probs=125.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++||||+|.||+++++.|+++|++| ..+.+|+++++++++.++.. ++|
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 105 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 105 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence 579999999999999999999999864 35668999998887766543 789
Q ss_pred EEEEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHH----c-CC-cEEEEecceeEeecCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRD----H-GI-LMMNYATGCIFEYDAAHPEGSGIGYKEED 506 (668)
Q Consensus 434 ~Vih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~----~-~~-~~v~~sS~~vy~~~~~~p~~~~~~~~ee~ 506 (668)
++||+||....... .....+....+.+|..+...+...+.. . +. ..+.++|.....
T Consensus 106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~----------------- 168 (294)
T d1w6ua_ 106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET----------------- 168 (294)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH-----------------
T ss_pred hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh-----------------
Confidence 99999997721111 111223445566788777777665432 1 22 333334432211
Q ss_pred CCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh---------HHHHhhcccceeecCCCcccHhhH
Q 005949 507 TPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN---------FITKISRYNKVVNIPNSMTVLDEL 574 (668)
Q Consensus 507 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~---------~~~~~~~~~~~~~~~~~~~~v~D~ 574 (668)
+.+....|+.+|...+.+.+.+. ...++|+-.+-|+.+..+.. +.......- . -.-+...+|+
T Consensus 169 -~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~---p-l~R~~~pedi 243 (294)
T d1w6ua_ 169 -GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI---P-CGRLGTVEEL 243 (294)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC---T-TSSCBCHHHH
T ss_pred -cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcC---C-CCCCCCHHHH
Confidence 11223579999999999988764 24689999999988865531 111111111 0 1134458999
Q ss_pred HHHHHHHHhcc----CCceeeecCCCc
Q 005949 575 LPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 575 a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
|+++..++... .+.++.+.+|..
T Consensus 244 A~~v~fL~sd~s~~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 244 ANLAAFLCSDYASWINGAVIKFDGGEE 270 (294)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred HHHHHHHhCchhcCCCCcEEEECCChh
Confidence 99999998643 456888877744
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.08 E-value=2.5e-10 Score=110.50 Aligned_cols=194 Identities=12% Similarity=0.042 Sum_probs=122.7
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccc-------------------------------------------cccccCChh
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEY-------------------------------------------GKGRLEDCS 421 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~-------------------------------------------~~~D~~d~~ 421 (668)
-++||||++-||+++++.|+++|++|.+ ...|+++++
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 5799999999999999999999987632 234577777
Q ss_pred HHHHHhhhc-----CCCEEEEcccccCCCCcc-cccccc--------------ccceehhhhhhHHHHHHHHHc------
Q 005949 422 SLIADVQSV-----KPTHVFNAAGVTGRPNVD-WCESHK--------------TDTIRTNVAGTLTLADVCRDH------ 475 (668)
Q Consensus 422 ~~~~~l~~~-----~~d~Vih~a~~~~~~~~~-~~~~~~--------------~~~~~~Nv~~~~~ll~~~~~~------ 475 (668)
+++++++.. ++|++||+||........ ....+. ...+.+|+.++..+.+++.+.
T Consensus 84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 163 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA 163 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence 777766543 789999999976211111 111111 124678999999888886542
Q ss_pred ---CC--cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCC
Q 005949 476 ---GI--LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNN 547 (668)
Q Consensus 476 ---~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g 547 (668)
+. .++.++|.... .+......|+.+|...+.+.+.+. ..+++|+-.+-|+....
T Consensus 164 ~~~~~~~~ii~~~s~~~~------------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 164 KHRGTNYSIINMVDAMTN------------------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp GGSCSCEEEEEECCTTTT------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred HhcCCCCccccccccccc------------------CCccceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 11 23333332211 122334679999999999888763 24689999998874332
Q ss_pred hh----hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCCccC
Q 005949 548 PR----NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVVS 599 (668)
Q Consensus 548 ~~----~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~s 599 (668)
.. .+........ ....-+...+|+|+++++++... .+.++.+-+|..+|
T Consensus 226 ~~~~~~~~~~~~~~~~---pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 226 VDDMPPAVWEGHRSKV---PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp GGGSCHHHHHHHHTTC---TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cccCCHHHHHHHHhcC---CCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 22 2222222211 11123456899999999998643 45678887776544
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.06 E-value=4.7e-09 Score=103.14 Aligned_cols=171 Identities=11% Similarity=0.042 Sum_probs=109.1
Q ss_pred CCeEEEEc--CCChhHHHHHHHHHHhCCCCEEEEEcCCCccC---------Cc--cccCCCc-CCCCeEEEEc-------
Q 005949 6 PKNILITG--AAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS---------NL--KNLIPSK-ASSNFKFVKG------- 64 (668)
Q Consensus 6 ~~~vLVtG--gtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~---------~~--~~~~~~~-~~~~~~~~~~------- 64 (668)
.|.+|||| ++..||+.+++.|+++ |.+|++.++..... .. ....... .........+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhh
Confidence 47899999 5569999999999999 78888776532100 00 0000000 0011122222
Q ss_pred -------------cCCCHHHHHHHhc-----cCCCCEEEEcCccCCc------ccccCChHHHHHHHHHHHHHHHHHHHH
Q 005949 65 -------------DIASADLVNFLLI-----TESIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKV 120 (668)
Q Consensus 65 -------------Dl~d~~~~~~~~~-----~~~~d~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~ 120 (668)
|+.+.+.+++++. ..++|++||+||.... +..++++...+++|+.++..+.+.+..
T Consensus 80 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~ 159 (329)
T d1uh5a_ 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN 159 (329)
T ss_dssp GGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence 4444433333321 1579999999986431 223445667889999998888877665
Q ss_pred c-CCCcEEEEEcCccccCCCCCCcCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHh----cCCCEEEEeeCceeC
Q 005949 121 T-GQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYG 191 (668)
Q Consensus 121 ~-~~~~~~v~~SS~~vyg~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~v~G 191 (668)
. ..-.++|.+||.+...... .+...|+.+|...+.+.+.++.+ +|+++..+.||.|-.
T Consensus 160 ~m~~~GsIv~iss~~~~~~~p-------------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 160 IMKPQSSIISLTYHASQKVVP-------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp GEEEEEEEEEEECGGGTSCCT-------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred hcccccccccceeehhccccc-------------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 3 2235899998866533221 12346999999999999887643 589999999998754
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.06 E-value=1.3e-09 Score=103.68 Aligned_cols=218 Identities=15% Similarity=0.084 Sum_probs=125.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHh----cc--C
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLL----IT--E 79 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~--~ 79 (668)
||.||||||++.||++++++|+++ |++|++.++... -...|+.+.+...... .+ .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~-----------------~~~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDA-----------------EVIADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSS-----------------SEECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChH-----------------HHHHHhcCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999 789999988531 0246777765544332 11 3
Q ss_pred CCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEcCccccCCCCCCcCCC------C---
Q 005949 80 SIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDAVVG------N--- 147 (668)
Q Consensus 80 ~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~------~--- 147 (668)
.+|+++++|+.... .+........|..+...+.+..... ........+++.............. .
T Consensus 62 ~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 138 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAK 138 (257)
T ss_dssp CCSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred CCcEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEE
Confidence 58999999987543 2344556677777777666543321 2234555555532221110000000 0
Q ss_pred -----CCCCCCCCCChhHHHHHHHHHHHHHHHHh---cCCCEEEEeeCceeCCCCCCCChHHHHHHHHHcCCCceeecCC
Q 005949 148 -----HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDG 219 (668)
Q Consensus 148 -----~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (668)
.......+...|+.+|...+.+.+.++.+ +|+++..+.||.+-.|.......-+.......+.. .+
T Consensus 139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~P----- 212 (257)
T d1fjha_ 139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFV-PP----- 212 (257)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CC-CS-----
T ss_pred EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcC-CC-----
Confidence 00000011235999999999999987754 48999999999987664311000001111111110 01
Q ss_pred CceEeceeHHHHHHHHHHHHhcC---CCCceEEEcCC
Q 005949 220 SNVRSYLYCEDVAEAFECILHKG---EVGHVYNVGTK 253 (668)
Q Consensus 220 ~~~~~~i~v~D~a~ai~~~~~~~---~~~~~~ni~~~ 253 (668)
..-+...+|++.++..++... -.|+.+.+.+|
T Consensus 213 --lgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 213 --MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp --TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred --CCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 112557899999999988543 35778888776
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=4.8e-10 Score=107.08 Aligned_cols=180 Identities=12% Similarity=0.002 Sum_probs=120.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-------------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-------------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-------------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
++++|||||+.||.++++.|+++|++| ..+..|+.+.+.+...++.. ..|
T Consensus 15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~ 94 (269)
T d1xu9a_ 15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD 94 (269)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCcc
Confidence 479999999999999999999999865 23445666666555544432 579
Q ss_pred EEEEcccccCCCC-ccccccccccceehhhhhhHHHHHHHH----HcCCcEEEEecceeEeecCCCCCCCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPN-VDWCESHKTDTIRTNVAGTLTLADVCR----DHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTP 508 (668)
Q Consensus 434 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~Nv~~~~~ll~~~~----~~~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~ 508 (668)
+++|.|+...... .....++....+++|+.++..+.+++. +.+.+++++||...+. +
T Consensus 95 ~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~------------------~ 156 (269)
T d1xu9a_ 95 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV------------------A 156 (269)
T ss_dssp EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS------------------C
T ss_pred ccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC------------------C
Confidence 9999998762111 112233445678899999988888774 3455788888876431 1
Q ss_pred CCCCCcchhhHHHHHHHHHhccC-----eeEeEEeeeecCCCCChhhHHHHhhcccceeecCCCcccHhhHHHHHHHHHh
Q 005949 509 NFTGSFYSKTKAMVEELLKEYDN-----VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 509 ~~~~~~Y~~sK~~~E~~~~~~~~-----~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
.+....|+.||...+.+.+.+.. .+++++..+.|+.+--+ +..+...+.. .......+++|+.++..+.
T Consensus 157 ~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~--~~~~~~~~~~----~~~~~~~e~~a~~i~~~~~ 230 (269)
T d1xu9a_ 157 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE--TAMKAVSGIV----HMQAAPKEECALEIIKGGA 230 (269)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH--HHHHHSCGGG----GGGCBCHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc--HHHHhccCCc----cccCCCHHHHHHHHHHHhh
Confidence 22346899999999988877642 35788888999877654 2233322211 1123347889988887776
Q ss_pred ccCC
Q 005949 584 RNLR 587 (668)
Q Consensus 584 ~~~~ 587 (668)
....
T Consensus 231 ~~~~ 234 (269)
T d1xu9a_ 231 LRQE 234 (269)
T ss_dssp TTCS
T ss_pred cCCC
Confidence 5433
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=4.5e-10 Score=106.12 Aligned_cols=184 Identities=13% Similarity=0.130 Sum_probs=117.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc---------------------ccccCChhHHHHHhhh-----cCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG---------------------KGRLEDCSSLIADVQS-----VKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~---------------------~~D~~d~~~~~~~l~~-----~~~d~Vih 437 (668)
+.++||||++.||.++++.|+++|++|.+. ..|+.+.+.++..... ...|.+++
T Consensus 6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (248)
T d2o23a1 6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 85 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccccc
Confidence 568999999999999999999999976332 2344454444333322 25799988
Q ss_pred cccccCCCCc-------cccccccccceehhhhhhHHHHHHHHHc-----------CCcEEEEecceeEeecCCCCCCCC
Q 005949 438 AAGVTGRPNV-------DWCESHKTDTIRTNVAGTLTLADVCRDH-----------GILMMNYATGCIFEYDAAHPEGSG 499 (668)
Q Consensus 438 ~a~~~~~~~~-------~~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----------~~~~v~~sS~~vy~~~~~~p~~~~ 499 (668)
.++....... ....+.....+++|+.++.++.+++..+ +..+|++||...+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--------- 156 (248)
T d2o23a1 86 CAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG--------- 156 (248)
T ss_dssp CCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC---------
T ss_pred ccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC---------
Confidence 8765510011 1112234466889999999999998553 225888888764421
Q ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh--hHHHHhhcc-cceeecCCCcccHhh
Q 005949 500 IGYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR--NFITKISRY-NKVVNIPNSMTVLDE 573 (668)
Q Consensus 500 ~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~--~~~~~~~~~-~~~~~~~~~~~~v~D 573 (668)
.+....|+.+|...+.+.+.+. ..+++|+..+.|+.+.-+. .+....... ........-+...+|
T Consensus 157 ---------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~pee 227 (248)
T d2o23a1 157 ---------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAE 227 (248)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHH
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHH
Confidence 2233679999999999988864 2468999999998776543 111111100 000111123556899
Q ss_pred HHHHHHHHHhcc
Q 005949 574 LLPISIEMAKRN 585 (668)
Q Consensus 574 ~a~~~~~~~~~~ 585 (668)
+|++++.+++.+
T Consensus 228 vA~~v~fL~s~~ 239 (248)
T d2o23a1 228 YAHLVQAIIENP 239 (248)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHhCC
Confidence 999999998754
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=1.2e-09 Score=103.97 Aligned_cols=189 Identities=10% Similarity=0.036 Sum_probs=121.3
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCccc-----------------------ccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPFE-----------------------YGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v~-----------------------~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+++|||||+| -||+++++.|+++|++|. ....|+.+..++.+.+... ++|
T Consensus 6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 85 (258)
T d1qsga_ 6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD 85 (258)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccc
Confidence 5899999999 788999999999999763 2234455555554444332 578
Q ss_pred EEEEcccccCCCCccccc---------cccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCE---------SHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAHPEGSGIG 501 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~---------~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~p~~~~~~ 501 (668)
++||.|+... ..... +.....+..|+.+...+++++... +..++++||....
T Consensus 86 ~~v~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~------------- 149 (258)
T d1qsga_ 86 GFVHSIGFAP---GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------- 149 (258)
T ss_dssp EEEECCCCCC---GGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-------------
T ss_pred eEEEeecccc---cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-------------
Confidence 9999998762 21110 112234557777777777777653 2245666665422
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCccc
Q 005949 502 YKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTV 570 (668)
Q Consensus 502 ~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~ 570 (668)
.+.+....|+.+|...+.+++.+. ..+++|+-.+.|+.+..+.. +.......- . -.-+..
T Consensus 150 -----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---p-l~R~~~ 220 (258)
T d1qsga_ 150 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT---P-IRRTVT 220 (258)
T ss_dssp -----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS---T-TSSCCC
T ss_pred -----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCC---C-CCCCcC
Confidence 112233679999999999887753 23689999999998875531 111111110 1 123556
Q ss_pred HhhHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 571 LDELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 571 v~D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
.+|+|.++..++... .+.++.+.+|-.
T Consensus 221 peeia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 221 IEDVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 899999999999643 455677776644
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.92 E-value=2e-09 Score=101.28 Aligned_cols=191 Identities=15% Similarity=0.134 Sum_probs=123.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc------------ccccccCChhHHHHHhh----hcCCCEEEEcccccCCCCc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE------------YGKGRLEDCSSLIADVQ----SVKPTHVFNAAGVTGRPNV 447 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~------------~~~~D~~d~~~~~~~l~----~~~~d~Vih~a~~~~~~~~ 447 (668)
++++||||++.||+++++.|+++|++|. ...+|+++.....+... ....+.+++.++.......
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKI 81 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccc
Confidence 4799999999999999999999999763 33466666554443333 2244566666654310000
Q ss_pred -c----ccccccccceehhhhhhHHHHHHHHHc-----------CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCC
Q 005949 448 -D----WCESHKTDTIRTNVAGTLTLADVCRDH-----------GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFT 511 (668)
Q Consensus 448 -~----~~~~~~~~~~~~Nv~~~~~ll~~~~~~-----------~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~ 511 (668)
. .........++.|+.+..++.+.+... ...+|++||...+.+ .+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------------------~~~ 143 (241)
T d1uaya_ 82 LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG------------------QIG 143 (241)
T ss_dssp BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC------------------CTT
T ss_pred cccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC------------------CCC
Confidence 0 111233456789999988888877543 236888888765422 122
Q ss_pred CCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChh------hHHHHhhcccceeecCCCcccHhhHHHHHHHHH
Q 005949 512 GSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPR------NFITKISRYNKVVNIPNSMTVLDELLPISIEMA 582 (668)
Q Consensus 512 ~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~ 582 (668)
...|+.+|...+.+.+.+.. .+++|+-.+-|+.+.-+. .....+.... ....-+...+|+|+++++++
T Consensus 144 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~---~~~~R~g~pedvA~~v~fL~ 220 (241)
T d1uaya_ 144 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQV---PFPPRLGRPEEYAALVLHIL 220 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTC---CSSCSCCCHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcC---CCCCCCcCHHHHHHHHHHHH
Confidence 36899999999998888642 468999999999887663 1111121111 11122445899999999998
Q ss_pred hcc--CCceeeecCC
Q 005949 583 KRN--LRGIWNFTNP 595 (668)
Q Consensus 583 ~~~--~~g~~ni~~~ 595 (668)
... .+.++++.+|
T Consensus 221 s~~~iTG~~i~VDGG 235 (241)
T d1uaya_ 221 ENPMLNGEVVRLDGA 235 (241)
T ss_dssp HCTTCCSCEEEESTT
T ss_pred hCCCCCCCEEEECCc
Confidence 755 4567777665
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=6e-10 Score=106.89 Aligned_cols=185 Identities=15% Similarity=0.020 Sum_probs=117.5
Q ss_pred EEEEcCCcchhHHHHHHHHHc-CCc------------------------ccccccccCChhHHHHHhhhc-----CCCEE
Q 005949 386 FLIYGRTGWIGGLLGKLCEKE-GIP------------------------FEYGKGRLEDCSSLIADVQSV-----KPTHV 435 (668)
Q Consensus 386 vli~G~~G~iG~~l~~~l~~~-g~~------------------------v~~~~~D~~d~~~~~~~l~~~-----~~d~V 435 (668)
.+||||++-||..+++.|+++ |++ +.++.+|++|.++++++++.. ++|++
T Consensus 6 AlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiL 85 (275)
T d1wmaa1 6 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVL 85 (275)
T ss_dssp EEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEE
Confidence 499999999999999999986 764 356778999999887766554 68999
Q ss_pred EEcccccCCCCc-cccccccccceehhhhhhHHHHHHHHHc---CCcEEEEecceeEeecCCC-CCCC----CCCC----
Q 005949 436 FNAAGVTGRPNV-DWCESHKTDTIRTNVAGTLTLADVCRDH---GILMMNYATGCIFEYDAAH-PEGS----GIGY---- 502 (668)
Q Consensus 436 ih~a~~~~~~~~-~~~~~~~~~~~~~Nv~~~~~ll~~~~~~---~~~~v~~sS~~vy~~~~~~-p~~~----~~~~---- 502 (668)
||.||....... .....+....+++|+.|+..+.+++... +.+++++||...+.+.... |.-. ....
T Consensus 86 VnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~ 165 (275)
T d1wmaa1 86 VNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEE 165 (275)
T ss_dssp EECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHH
T ss_pred EEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhh
Confidence 999997721111 1112234457889999999999998643 3378888886433211100 0000 0000
Q ss_pred --------------CCCCCCCCCCCcchhhHHHHHHHHHhcc-------CeeEeEEeeeecCCCCChhhHHHHhhcccce
Q 005949 503 --------------KEEDTPNFTGSFYSKTKAMVEELLKEYD-------NVCTLRVRMPISSDLNNPRNFITKISRYNKV 561 (668)
Q Consensus 503 --------------~ee~~~~~~~~~Y~~sK~~~E~~~~~~~-------~~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~ 561 (668)
.....+..+...|+.||.....+.+.+. +..++++..+.|+.+.-+. .+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m------~~---- 235 (275)
T d1wmaa1 166 LVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM------AG---- 235 (275)
T ss_dssp HHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT------TC----
T ss_pred hccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc------cc----
Confidence 0001122344679999998887655432 2247899999898665331 10
Q ss_pred eecCCCcccHhhHHHHHHHHHh
Q 005949 562 VNIPNSMTVLDELLPISIEMAK 583 (668)
Q Consensus 562 ~~~~~~~~~v~D~a~~~~~~~~ 583 (668)
.......+|.|+.++.+..
T Consensus 236 ---~~~~~~pee~A~~~~~~a~ 254 (275)
T d1wmaa1 236 ---PKATKSPEEGAETPVYLAL 254 (275)
T ss_dssp ---TTCSBCHHHHTHHHHHHHS
T ss_pred ---CcccCCHHHHHHHHHHHHc
Confidence 1112347888888887763
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.77 E-value=6.8e-09 Score=101.98 Aligned_cols=144 Identities=13% Similarity=0.092 Sum_probs=96.7
Q ss_pred EEEEEc--CCcchhHHHHHHHHHcCCccccc-------------------------------------------------
Q 005949 385 KFLIYG--RTGWIGGLLGKLCEKEGIPFEYG------------------------------------------------- 413 (668)
Q Consensus 385 kvli~G--~~G~iG~~l~~~l~~~g~~v~~~------------------------------------------------- 413 (668)
..|||| ++.-||+.+++.|.++|.+|.+.
T Consensus 4 VAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (329)
T d1uh5a_ 4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID 83 (329)
T ss_dssp EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCC
T ss_pred EEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccc
Confidence 589999 55799999999999999866321
Q ss_pred -------ccccCChhHHHHHhhhc-----CCCEEEEcccccC---CCCccccccccccceehhhhhhHHHHHHHHHc---
Q 005949 414 -------KGRLEDCSSLIADVQSV-----KPTHVFNAAGVTG---RPNVDWCESHKTDTIRTNVAGTLTLADVCRDH--- 475 (668)
Q Consensus 414 -------~~D~~d~~~~~~~l~~~-----~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~--- 475 (668)
..|+++.++++++++.. +.|++||.||... .+-.+...++....+++|+.++..+++++..+
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~ 163 (329)
T d1uh5a_ 84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP 163 (329)
T ss_dssp HHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc
Confidence 11344444444443322 6799999998651 01112233455667889999999998888764
Q ss_pred CCcEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc----CeeEeEEeeeecCCC
Q 005949 476 GILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD----NVCTLRVRMPISSDL 545 (668)
Q Consensus 476 ~~~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~l~~~~~r~~~~ 545 (668)
+..+|.+||...... .| ...+.|+.+|...|.+++.+. ..+++|+-.+.|+.+
T Consensus 164 ~GsIv~iss~~~~~~----------------~p-~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 164 QSSIISLTYHASQKV----------------VP-GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp EEEEEEEECGGGTSC----------------CT-TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred ccccccceeehhccc----------------cc-ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 235677776543211 11 123579999999999888863 336899999988755
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.74 E-value=1.4e-08 Score=98.64 Aligned_cols=191 Identities=12% Similarity=-0.029 Sum_probs=118.9
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCccccccc------------------------------------c---------
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPFEYGKG------------------------------------R--------- 416 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v~~~~~------------------------------------D--------- 416 (668)
+++|||||+| -||+.+++.|+++|.+|.+... |
T Consensus 9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (297)
T d1d7oa_ 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV 88 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence 5799999987 7999999999999987633210 0
Q ss_pred -----------cCChhHHHHH----hhhc-CCCEEEEcccccC---CCCccccccccccceehhhhhhHHHHHHHHHcCC
Q 005949 417 -----------LEDCSSLIAD----VQSV-KPTHVFNAAGVTG---RPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477 (668)
Q Consensus 417 -----------~~d~~~~~~~----l~~~-~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~ 477 (668)
..+...++++ .+.+ ++|++||.||... .|..+...++....+++|+.+..++.+++...-.
T Consensus 89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~ 168 (297)
T d1d7oa_ 89 PEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMN 168 (297)
T ss_dssp CHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred hhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhh
Confidence 1111122222 2222 6799999998641 1112223344566788999999999998876522
Q ss_pred ---cEEEEecceeEeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhc----cCeeEeEEeeeecCCCCChh-
Q 005949 478 ---LMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEY----DNVCTLRVRMPISSDLNNPR- 549 (668)
Q Consensus 478 ---~~v~~sS~~vy~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~----~~~~~l~~~~~r~~~~~g~~- 549 (668)
..++++++.... ........|+.+|...+.+.+.. ...+++|+..+.|+.+..+.
T Consensus 169 ~~g~~~~~~~~~~~~-----------------~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~ 231 (297)
T d1d7oa_ 169 PGGASISLTYIASER-----------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA 231 (297)
T ss_dssp EEEEEEEEECGGGTS-----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred cCCcceeeeehhhcc-----------------cccccccceecccccccccccccchhccccceEEecccccccccchhh
Confidence 234444433211 11122367999999988877654 23468999999998876553
Q ss_pred -------hHHHHhhcccceeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCC
Q 005949 550 -------NFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNP 595 (668)
Q Consensus 550 -------~~~~~~~~~~~~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~ 595 (668)
.+.....+.-+ -.-+...+|+|++++.++... .+.++.+-+|
T Consensus 232 ~~~~~~~~~~~~~~~~~P----lgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG 284 (297)
T d1d7oa_ 232 KAIGFIDTMIEYSYNNAP----IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp SCCSHHHHHHHHHHHHSS----SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred hhccCCHHHHHHHHhCCC----CCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 12222222111 113556899999999998543 4557777665
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.73 E-value=1.6e-08 Score=96.43 Aligned_cols=197 Identities=9% Similarity=-0.007 Sum_probs=116.8
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCcc----------------------cccccccCChhHHHHHhhhc--------C
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPF----------------------EYGKGRLEDCSSLIADVQSV--------K 431 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v----------------------~~~~~D~~d~~~~~~~l~~~--------~ 431 (668)
++++||||+| .||+++++.|+++|++| ..+.+|+++++++.++++.. +
T Consensus 7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ 86 (268)
T d2h7ma1 7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNK 86 (268)
T ss_dssp CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCC
Confidence 4799999654 59999999999999865 34567888876655554432 4
Q ss_pred CCEEEEcccccCCCCc------cccccccccceehhhhhhHHHHHHHHHcCC--cEEEEecceeEeecCCCCCCCCCCCC
Q 005949 432 PTHVFNAAGVTGRPNV------DWCESHKTDTIRTNVAGTLTLADVCRDHGI--LMMNYATGCIFEYDAAHPEGSGIGYK 503 (668)
Q Consensus 432 ~d~Vih~a~~~~~~~~------~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~--~~v~~sS~~vy~~~~~~p~~~~~~~~ 503 (668)
.|+++|+||....... +.........+..|......+......... ..++++|+...
T Consensus 87 ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~--------------- 151 (268)
T d2h7ma1 87 LDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS--------------- 151 (268)
T ss_dssp EEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS---------------
T ss_pred cceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc---------------
Confidence 6999999996510000 001112222345556666655555544322 23333332211
Q ss_pred CCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--HH------------HHhhcc-cceeecC
Q 005949 504 EEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--FI------------TKISRY-NKVVNIP 565 (668)
Q Consensus 504 ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--~~------------~~~~~~-~~~~~~~ 565 (668)
.+.+....|+.+|...+.+.+.+.. ..++|+-.+.|+.+-.+.. +. ...... .......
T Consensus 152 ---~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 228 (268)
T d2h7ma1 152 ---RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG 228 (268)
T ss_dssp ---SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC
T ss_pred ---ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC
Confidence 1112236899999999998887632 3579999999987765421 10 000000 0001112
Q ss_pred CCcccHhhHHHHHHHHHhcc----CCceeeecCCCcc
Q 005949 566 NSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 566 ~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
..+...+|+|+++.+++... .+.++.+-+|...
T Consensus 229 rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 229 WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 23566899999999998542 3456777766543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.71 E-value=9.5e-10 Score=98.86 Aligned_cols=84 Identities=8% Similarity=0.017 Sum_probs=64.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCC-cCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPS-KASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
.+++|+||||||+|.||+.+++.|+++ +.+|++++|.... ...+... ....++....+|+.|.+.+.+++ .++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~i 93 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDK--AQAAADSVNKRFKVNVTAAETADDASRAEAV--KGA 93 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHHHHHHHHTCCCEEEECCSHHHHHHHT--TTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHH--HHHHHHHHHhccchhhhhhhcccHHHHHHHh--cCc
Confidence 357899999999999999999999999 6889999886421 1111111 11124567889999999999998 789
Q ss_pred CEEEEcCccCC
Q 005949 82 DTIMHFAAQTH 92 (668)
Q Consensus 82 d~Vih~a~~~~ 92 (668)
|+|||+||...
T Consensus 94 Dilin~Ag~g~ 104 (191)
T d1luaa1 94 HFVFTAGAIGL 104 (191)
T ss_dssp SEEEECCCTTC
T ss_pred CeeeecCcccc
Confidence 99999998643
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.68 E-value=4.1e-08 Score=93.84 Aligned_cols=189 Identities=10% Similarity=-0.046 Sum_probs=112.3
Q ss_pred cEEEEEcCCc--chhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhc-----CCC
Q 005949 384 MKFLIYGRTG--WIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSV-----KPT 433 (668)
Q Consensus 384 mkvli~G~~G--~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~-----~~d 433 (668)
+++|||||+| -||.++++.|+++|++| .+...|+++++++.+++..+ ++|
T Consensus 6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id 85 (274)
T d2pd4a1 6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD 85 (274)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCC
Confidence 5799999887 79999999999999976 23456777777766665443 689
Q ss_pred EEEEcccccCCCCcccccccc-----ccceehh---hhhhHHHHHHHHHcC--CcEEEEecc-eeEeecCCCCCCCCCCC
Q 005949 434 HVFNAAGVTGRPNVDWCESHK-----TDTIRTN---VAGTLTLADVCRDHG--ILMMNYATG-CIFEYDAAHPEGSGIGY 502 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~-----~~~~~~N---v~~~~~ll~~~~~~~--~~~v~~sS~-~vy~~~~~~p~~~~~~~ 502 (668)
++||+++... ........ ......+ ..+...+........ ...++++|+ ....
T Consensus 86 ~lV~nag~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------------- 149 (274)
T d2pd4a1 86 FIVHSVAFAP---KEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------- 149 (274)
T ss_dssp EEEECCCCCC---GGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------------
T ss_pred eEEeeccccc---ccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc-------------
Confidence 9999999762 21111111 1111122 222333333332221 123333332 2221
Q ss_pred CCCCCCCCCCCcchhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhh--------HHHHhhcccceeecCCCcccH
Q 005949 503 KEEDTPNFTGSFYSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRN--------FITKISRYNKVVNIPNSMTVL 571 (668)
Q Consensus 503 ~ee~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~v 571 (668)
+......|+.+|...+.+++.... ..++|+-.+.|+.+.-+.. +...... .....-+...
T Consensus 150 -----~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~----~~p~~r~~~p 220 (274)
T d2pd4a1 150 -----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEI----NAPLRKNVSL 220 (274)
T ss_dssp -----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHH----HSTTSSCCCH
T ss_pred -----ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhh----hhhccCCcCH
Confidence 112236799999999998877532 3579999999987765421 1111111 1112245568
Q ss_pred hhHHHHHHHHHhcc----CCceeeecCCCc
Q 005949 572 DELLPISIEMAKRN----LRGIWNFTNPGV 597 (668)
Q Consensus 572 ~D~a~~~~~~~~~~----~~g~~ni~~~~~ 597 (668)
+|+|.++.+++... .+.++.+-+|..
T Consensus 221 edIA~~v~fL~S~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 221 EEVGNAGMYLLSSLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence 99999999998643 455788777653
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.63 E-value=6.5e-08 Score=92.06 Aligned_cols=193 Identities=11% Similarity=0.047 Sum_probs=111.8
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccccc--------------------------cccCC----hhHHHHHhh----hc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGK--------------------------GRLED----CSSLIADVQ----SV 430 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~~--------------------------~D~~d----~~~~~~~l~----~~ 430 (668)
..|||||++-||..+++.|+++|++|.+.. .|..+ .+.+.++++ .+
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999762221 22222 233333322 21
Q ss_pred -CCCEEEEcccccCCCCc-cccc-----------cccccceehhhhhhHHHHHHHHHcC----------CcEEEEeccee
Q 005949 431 -KPTHVFNAAGVTGRPNV-DWCE-----------SHKTDTIRTNVAGTLTLADVCRDHG----------ILMMNYATGCI 487 (668)
Q Consensus 431 -~~d~Vih~a~~~~~~~~-~~~~-----------~~~~~~~~~Nv~~~~~ll~~~~~~~----------~~~v~~sS~~v 487 (668)
++|++||.||....... .... ......+..|..+...........- ...+.++|...
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T d1mxha_ 83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT 162 (266)
T ss_dssp SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence 68999999997621000 0000 1111233445555555555444421 12222222221
Q ss_pred EeecCCCCCCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHhcc---CeeEeEEeeeecCCCCChh----hHHHHhhcccc
Q 005949 488 FEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYD---NVCTLRVRMPISSDLNNPR----NFITKISRYNK 560 (668)
Q Consensus 488 y~~~~~~p~~~~~~~~ee~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~l~~~~~r~~~~~g~~----~~~~~~~~~~~ 560 (668)
. .+.+....|+.||...+.+.+.+. ...++|+..+.|+.+.-+. .+...+.+.-
T Consensus 163 ~------------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~- 223 (266)
T d1mxha_ 163 D------------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV- 223 (266)
T ss_dssp G------------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTC-
T ss_pred c------------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcC-
Confidence 1 122234689999999999887753 2468999999998776443 3333333221
Q ss_pred eeecCCCcccHhhHHHHHHHHHhcc----CCceeeecCCCcc
Q 005949 561 VVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVV 598 (668)
Q Consensus 561 ~~~~~~~~~~v~D~a~~~~~~~~~~----~~g~~ni~~~~~~ 598 (668)
..+.-+...+|+|+++++++... .+.++++-+|-.+
T Consensus 224 --pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 224 --PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp --TTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred --CCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 12222346899999999999653 4557888776443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.49 E-value=3.3e-08 Score=93.61 Aligned_cols=205 Identities=11% Similarity=0.021 Sum_probs=110.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccc-------cccCChhHHHHHhh----hc--CCCEEEEcccccCCCCccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK-------GRLEDCSSLIADVQ----SV--KPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~-------~D~~d~~~~~~~l~----~~--~~d~Vih~a~~~~~~~~~~ 449 (668)
|+.|+||||++.||+++++.|+++|++|.+.. .|+.+.+....... +. ..|+++|+|+.. .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~---~--- 74 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG---P--- 74 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC---T---
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCC---C---
Confidence 45689999999999999999999999875442 34555444333322 21 479999999866 1
Q ss_pred cccccccceehhhhhhHHHHHHHHH----cCC-cEEEEeccee-EeecCCCCCCC----CC-CC----CCCCCCCCCCCc
Q 005949 450 CESHKTDTIRTNVAGTLTLADVCRD----HGI-LMMNYATGCI-FEYDAAHPEGS----GI-GY----KEEDTPNFTGSF 514 (668)
Q Consensus 450 ~~~~~~~~~~~Nv~~~~~ll~~~~~----~~~-~~v~~sS~~v-y~~~~~~p~~~----~~-~~----~ee~~~~~~~~~ 514 (668)
...........|..+...+.+.... ... ....+++... +-.....+... +. .. .......+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~ 154 (257)
T d1fjha_ 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHH
Confidence 1222234455777777776665443 222 2333333211 11100000000 00 00 000001111235
Q ss_pred chhhHHHHHHHHHhccC---eeEeEEeeeecCCCCChhhHHHHhhcccceee------cC-CCcccHhhHHHHHHHHHhc
Q 005949 515 YSKTKAMVEELLKEYDN---VCTLRVRMPISSDLNNPRNFITKISRYNKVVN------IP-NSMTVLDELLPISIEMAKR 584 (668)
Q Consensus 515 Y~~sK~~~E~~~~~~~~---~~~l~~~~~r~~~~~g~~~~~~~~~~~~~~~~------~~-~~~~~v~D~a~~~~~~~~~ 584 (668)
|+.||...+.+.+.+.. ..++|+-.+-|+.+-.|. ............ .+ .-+...+|+|+++.+++..
T Consensus 155 Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~--~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~ 232 (257)
T d1fjha_ 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL--LQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSP 232 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTTSCCCTHHHHHHHHHHTSG
T ss_pred HHHHhhhhhccccccccccccccccccccccCCcCChh--HHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999999988742 357999999998776542 111111111000 11 1244689999999999854
Q ss_pred c----CCceeeecCC
Q 005949 585 N----LRGIWNFTNP 595 (668)
Q Consensus 585 ~----~~g~~ni~~~ 595 (668)
. .+.++.+-+|
T Consensus 233 ~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 233 AASYVHGAQIVIDGG 247 (257)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhCCccCceEEeCCC
Confidence 3 3556776554
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.29 E-value=1.2e-07 Score=84.70 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=60.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcc-----------------------cccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPF-----------------------EYGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v-----------------------~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
++|+||||+|.||+.+++.|.++|.+| .+...|++|.+++++.+.+. |+|||+||
T Consensus 24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i--Dilin~Ag 101 (191)
T d1luaa1 24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA--HFVFTAGA 101 (191)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC--SEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCc--CeeeecCc
Confidence 589999999999999999999999864 34567889999999999876 99999998
Q ss_pred ccCCCCccccccccccceehhhhhhHHHH
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLA 469 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll 469 (668)
.. ......++....++.|+.+..++.
T Consensus 102 ~g---~~~~~~e~~~~~~~~nv~~~~~~~ 127 (191)
T d1luaa1 102 IG---LELLPQAAWQNESSIEIVADYNAQ 127 (191)
T ss_dssp TT---CCCBCHHHHHTCTTCCEEEECCCS
T ss_pred cc---cccCCHHHHHhhhcceeehhHhhH
Confidence 65 122233334444555655554443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.16 E-value=7.2e-06 Score=68.34 Aligned_cols=116 Identities=15% Similarity=0.054 Sum_probs=77.9
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMHF 87 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 87 (668)
||.|+||+|.+|++++-.|..++.--+++++|.........++...........+.. .....+.+ .++|+||.+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~----~~~~~~~~--~~aDivVit 75 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCL--KGCDVVVIP 75 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHH--TTCSEEEEC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEc----CCChHHHh--CCCCEEEEC
Confidence 899999999999999999998876678999987543222222221111112222221 23333444 789999999
Q ss_pred CccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 88 AAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 88 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
||.... ...+..+.+..|+.-.+.+++.+.++++-..++.+|
T Consensus 76 ag~~~~--~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 76 AGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp CSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCcCCC--CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 996432 224566889999999999999999987444555554
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.00 E-value=4.5e-05 Score=63.40 Aligned_cols=117 Identities=14% Similarity=0.020 Sum_probs=76.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHh-CCCCEEEEEcCCCccC-CccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRN-YPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~-g~~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
|||.|+|++|.+|++++-.|..+ +...++.++|..+... ...++..-........ ...-.+.+. + .+.|+|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~----~--~~aDvv 73 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDATPA----L--EGADVV 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE-ECSSCCHHH----H--TTCSEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE-EEcCCCccc----c--CCCCEE
Confidence 68999999999999999887654 5567899998743110 0001111111112222 223334443 3 689999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcC
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS 132 (668)
|-+||.... ...+..+.+..|..-.+.+.+.+.+.++-..++.+|.
T Consensus 74 vitaG~~~k--~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 74 LISAGVRRK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp EECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EECCCccCC--CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 999997542 2345668899999999999999998875455666653
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.90 E-value=3.2e-05 Score=64.34 Aligned_cols=115 Identities=10% Similarity=0.113 Sum_probs=75.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc----ccCC--CcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK----NLIP--SKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~----~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
|||.|+||+|.+|+.++..|+.++--.++.++|+.......+ ++.. .....+++....--.|.+. + .+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----l--~~ 74 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----I--DE 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----G--TT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----h--cc
Confidence 589999999999999999999886556899998753211111 1111 1112233333222223332 2 68
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~ 130 (668)
+|+||-+||.... .-.+..+.+..|+.-.+.+.+.+.+.++ +.++.+
T Consensus 75 aDvVVitAG~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~-~~iivV 121 (145)
T d1hyea1 75 SDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICD-TKIFVI 121 (145)
T ss_dssp CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEC
T ss_pred ceEEEEecccccC--CCCChhhhhhhhHHHHHHHHHHHhccCC-CeEEEE
Confidence 9999999997442 2235668899999999999999988763 455544
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.84 E-value=1e-05 Score=67.59 Aligned_cols=115 Identities=11% Similarity=0.140 Sum_probs=72.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIP-SKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
++|||.|+|+ |++|+.++..|+.++-..+++++|+...... ..++.. ...........+|. ++ + .++
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----~--~~a 73 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----C--KDA 73 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----G--TTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----h--ccc
Confidence 4679999995 9999999999999976679999998542111 111111 01122344555553 22 2 689
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+||.+||..... ..+..+.+..|+.-.+.+.+.+.+.++-..++.+|
T Consensus 74 divvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 74 DLVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp SEEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred cEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 9999999875432 23455778899999999999999887433444443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.83 E-value=6.7e-05 Score=62.82 Aligned_cols=119 Identities=17% Similarity=0.199 Sum_probs=80.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCC--CcCCCCeEEEEccCCCHHHHHHHh
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIP--SKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
|.+..++||.|+|+ |++|+.++-.|+.++...++.++|+...... ..++.. ......+.....|. +. +
T Consensus 1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~----l 72 (148)
T d1ldna1 1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD----C 72 (148)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG----T
T ss_pred CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH----h
Confidence 66666789999996 9999999999999976779999997543211 111111 11122344444443 22 3
Q ss_pred ccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 77 ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
.++|+||.+||.... ......+.+..|+.-.+.+.+.+.++++-..++.+|
T Consensus 73 --~daDvvvitag~~~~--~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 73 --RDADLVVICAGANQK--PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp --TTCSEEEECCSCCCC--TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred --ccceeEEEecccccc--cCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 689999999997542 224456788899999999999988887445555554
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.70 E-value=0.00011 Score=60.61 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=77.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC----ccccCC-CcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN----LKNLIP-SKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~----~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
.||.|+||+|.+|+.++-.|+.++...++.++|....... ..++.. .......+...+|. +. + .++
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~--~~a 71 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----T--AGS 71 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----G--TTC
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----h--hhc
Confidence 3899999999999999999999977778999885322111 111111 01123444444443 32 2 689
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+|+-+||.... ...+..+.+..|+.-.+.+.+.+.+.++-..++.+|
T Consensus 72 DiVvitaG~~~~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 72 DVVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred CEEEEecccccc--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 999999996442 224567899999999999999999887444555554
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.68 E-value=5.3e-05 Score=62.93 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhC--CCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNY--PEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g--~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|++|.|+||||++|+.+++.|+++. +..+++.+.+....... . ...... ....++.+.+.+ .++|+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~--~--~~~~~~--~~~~~~~~~~~~------~~~Di 68 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA--P--SFGGTT--GTLQDAFDLEAL------KALDI 68 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC--C--GGGTCC--CBCEETTCHHHH------HTCSE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccc--c--cccCCc--eeeecccchhhh------hcCcE
Confidence 5699999999999999999888753 34567666554321110 0 000111 112234444332 57899
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCC
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET 139 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~ 139 (668)
||.+++.. -...+...+.+.| .+.+.+|.++.|...
T Consensus 69 vF~a~~~~------------------~s~~~~~~~~~~g--~~~~VID~Ss~fR~~ 104 (146)
T d1t4ba1 69 IVTCQGGD------------------YTNEIYPKLRESG--WQGYWIDAASSLRMK 104 (146)
T ss_dssp EEECSCHH------------------HHHHHHHHHHHTT--CCCEEEECSSTTTTC
T ss_pred EEEecCch------------------HHHHhhHHHHhcC--CCeecccCCcccccC
Confidence 99887531 1255566666656 344455555555443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.65 E-value=0.00016 Score=59.77 Aligned_cols=113 Identities=13% Similarity=0.144 Sum_probs=72.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc--ccCCCc-CCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK--NLIPSK-ASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
+||.|+|+ |.+|+.++-.|+.++...++.++|........+ ++..-. .........+ +++ .+ .++|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~----~~--~~adi 71 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS----DV--KDCDV 71 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----GG--TTCSE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH----Hh--CCCce
Confidence 58999996 999999999999987667999999765432211 121111 1122333333 232 23 68999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+-+||.... ...+..+.+..|+.-.+.+++.+.++++-..++.+|
T Consensus 72 vvitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 72 IVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp EEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred EEEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 9999996542 234566888999999999999999887444455554
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.61 E-value=6.7e-05 Score=61.77 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=55.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+|+|+|+ |.+|+.+++.|.+. +++|+++++... ..+.+.. ..+...+.||.+|++.+.++- -..+|.++-
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid~d~~--~~~~~~~---~~~~~vi~Gd~~~~~~l~~~~-i~~a~~vv~ 71 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDKD--ICKKASA---EIDALVINGDCTKIKTLEDAG-IEDADMYIA 71 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHH--HHHHHHH---HCSSEEEESCTTSHHHHHHTT-TTTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCCcceecCChh--hhhhhhh---hhhhhhccCcccchhhhhhcC-hhhhhhhcc
Confidence 68999996 99999999999998 788999988532 2222211 125788999999999998873 257898886
Q ss_pred cC
Q 005949 87 FA 88 (668)
Q Consensus 87 ~a 88 (668)
+.
T Consensus 72 ~t 73 (132)
T d1lssa_ 72 VT 73 (132)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.42 E-value=0.00052 Score=58.82 Aligned_cols=118 Identities=16% Similarity=0.093 Sum_probs=74.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhC-----CCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNY-----PEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g-----~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
..||.||||+|.||++++-.|++.. ....+.++|.......++.+.. .........+..--.+ .+.+
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~----~~~~- 98 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDP----YEVF- 98 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH----HHHT-
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccc----hhhc-
Confidence 3489999999999999999998742 1236667776543222222211 1122233322221122 2344
Q ss_pred cCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEc
Q 005949 78 TESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI-RRFIHVS 131 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~S 131 (668)
.+.|+||-+||... .......+.+..|+.-.+.+.+++.+..+. -+++.+|
T Consensus 99 -~~aDvVvi~ag~~r--kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 99 -EDVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp -TTCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -cCCceEEEeeccCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 78999999998754 234566789999999999999999986432 3455554
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.39 E-value=0.00029 Score=58.33 Aligned_cols=87 Identities=22% Similarity=0.193 Sum_probs=64.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCc--ccccc--------cc------------cCChhHHHHHhhhcCCCEEEEccccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIP--FEYGK--------GR------------LEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~--v~~~~--------~D------------~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
||.|+||+|.+|++++-.|..+|.- +.++. .| .....+..+.++++ |+||.+||..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~a--DivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGC--DVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTC--SEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCC--CEEEECCCcC
Confidence 7999999999999999999988862 11110 01 11234555677777 9999999955
Q ss_pred CCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 443 GRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
. ....+..+.++.|+.....+++.+.+++.+
T Consensus 80 ~-----~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~ 110 (144)
T d1mlda1 80 R-----KPGMTRDDLFNTNATIVATLTAACAQHCPD 110 (144)
T ss_dssp C-----CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred C-----CCCCCcchHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 223456677889999999999999999763
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=0.0001 Score=61.10 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=53.0
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC-Ccc----------------cccccccCChhH-HHHHhhhcCCCEEEEcccccCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG-IPF----------------EYGKGRLEDCSS-LIADVQSVKPTHVFNAAGVTGR 444 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g-~~v----------------~~~~~D~~d~~~-~~~~l~~~~~d~Vih~a~~~~~ 444 (668)
|+||.|.||||++|+.+++.|+++. +.+ .+...++...+. -...++++ |+||-+++-.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~--DivF~a~~~~-- 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKAL--DIIVTCQGGD-- 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTC--SEEEECSCHH--
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcC--cEEEEecCch--
Confidence 5699999999999999999887763 221 111111111111 11234555 9999998622
Q ss_pred CCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeE
Q 005949 445 PNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIF 488 (668)
Q Consensus 445 ~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy 488 (668)
-+..+...+.+.|.+.++++.|+.|
T Consensus 77 -------------------~s~~~~~~~~~~g~~~~VID~Ss~f 101 (146)
T d1t4ba1 77 -------------------YTNEIYPKLRESGWQGYWIDAASSL 101 (146)
T ss_dssp -------------------HHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred -------------------HHHHhhHHHHhcCCCeecccCCccc
Confidence 2445677777888887788777766
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.36 E-value=0.00071 Score=55.97 Aligned_cols=114 Identities=17% Similarity=0.057 Sum_probs=74.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC--CC--cCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI--PS--KASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
|||.|+|+ |.+|+.++..|+..+-..++.++|..........+. .. ......++... .|.+. + .++|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~----~--~dad 71 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD----T--ANSD 71 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG----G--TTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH----h--cCCe
Confidence 58999996 999999999999987667999999865322211111 10 01123333322 22332 3 6899
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
+|+-+||..... -....+....|+.-.+.+.+.+.+.++-..++.+|
T Consensus 72 vvvitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1guza1 72 IVIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (142)
T ss_dssp EEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEEEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence 999999974422 23456788999999999999998877433444443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.35 E-value=0.00015 Score=59.89 Aligned_cols=113 Identities=15% Similarity=0.062 Sum_probs=74.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccC--C-CcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLI--P-SKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~--~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
|||.|+|+ |.+|+.++-.|+.++...++.++|........+.+. . ...........+| .++ + .++|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~----~--~~adi 70 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD----L--KGSDV 70 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG----G--TTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH----h--cCCCE
Confidence 58999996 999999999999987667999999754321111111 0 0112234444433 322 3 68999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
||-+||..... .....+.+..|+.-.+.+.+.+.+.++-..++.+|
T Consensus 71 vvitag~~~~~--g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 71 VIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEecccccCC--CcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence 99999975432 23456788889999999999999887434444443
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.35 E-value=0.00052 Score=56.60 Aligned_cols=114 Identities=9% Similarity=0.087 Sum_probs=75.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc--ccCCC-cCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK--NLIPS-KASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
.||.|+|+ |.+|++++-.|+.++-..+++++|........+ ++..- ........... .+.+. + .++|+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~----~--~daDv 72 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----C--RDADM 72 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----G--TTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH----h--hCCcE
Confidence 58999996 999999999999997777999999764321111 11111 01112233222 22322 2 67999
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
||-+||.... .-....+.+..|+.-.+.+.+.+.++++-..++.+|
T Consensus 73 VVitaG~~~~--~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 73 VVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEEecccccC--CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9999997542 224456788999999999999999887434455554
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.21 E-value=0.00019 Score=58.03 Aligned_cols=73 Identities=18% Similarity=0.277 Sum_probs=53.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVA 463 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~ 463 (668)
|||.|.|++|-.|+.+.+.+.++|+++... .|....+. +. ++|+||.+.. -.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~-id~~~~~~----~~--~~DVvIDFS~---------------------p~ 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK-VDVNGVEE----LD--SPDVVIDFSS---------------------PE 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EETTEEEE----CS--CCSEEEECSC---------------------GG
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE-ECCCcHHH----hc--cCCEEEEecC---------------------HH
Confidence 799999999999999999999998876322 23222221 22 4699999865 23
Q ss_pred hhHHHHHHHHHcCCcEEEEec
Q 005949 464 GTLTLADVCRDHGILMMNYAT 484 (668)
Q Consensus 464 ~~~~ll~~~~~~~~~~v~~sS 484 (668)
++..+++.|.++++++|.=+|
T Consensus 53 ~~~~~l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 53 ALPKTVDLCKKYRAGLVLGTT 73 (128)
T ss_dssp GHHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEEcC
Confidence 567899999999987654444
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.21 E-value=0.00095 Score=55.95 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCc--CCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSK--ASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
+.+||-|+|+ |.+|+.++-.|..++.--++.++|....... ..++.... .........+| .+. + .+
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~----~--~~ 88 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSV----T--AN 88 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGG----G--TT
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhh----c--cc
Confidence 3569999995 9999999999999977779999998543221 11111111 11122222233 332 2 68
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
+|+||.+||..... -.+..+.+..|+.-.+.+...+.+.++-.-++.+|
T Consensus 89 adiVVitAg~~~~~--g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 89 SKIVVVTAGVRQQE--GESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp CSEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccEEEEecCCcccc--CcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999999975432 24456788899999999999998877444566665
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.20 E-value=0.00027 Score=59.42 Aligned_cols=117 Identities=10% Similarity=0.058 Sum_probs=76.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCC--ccccCCCc--CCCCeEEEEccCCCHHHHHHHhcc
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN--LKNLIPSK--ASSNFKFVKGDIASADLVNFLLIT 78 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~--~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 78 (668)
.|+..||.|+|+ |.+|++++-.|+.++...+++++|....... ..++.... ..........| .+. +
T Consensus 16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~----~-- 85 (159)
T d2ldxa1 16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNV----S-- 85 (159)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGG----G--
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhh----h--
Confidence 345668999995 9999999999999977779999997643211 11121111 11122233333 332 2
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
.++|+||-+||..... ..+..+.++.|+.-.+.+...+.+.++-..++.+|
T Consensus 86 ~~adivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 86 ANSKLVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp TTEEEEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred ccccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence 6789999999875432 23344677889999999998888877545566555
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.19 E-value=0.00082 Score=56.45 Aligned_cols=119 Identities=13% Similarity=0.041 Sum_probs=72.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCC-----CEEEEEcCCCccCCccccC---CCcCCCCeEEEEccCCCHHHHHHHh
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPE-----YKIVVLDKLDYCSNLKNLI---PSKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~-----~~v~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
.++||.|+||+|++|++++-.|.....- ....+++........+... ..........+...-.+. +.+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 78 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VAF 78 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----hhc
Confidence 4679999999999999999999876321 1122222211111111111 111223344444433333 334
Q ss_pred ccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEc
Q 005949 77 ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI-RRFIHVS 131 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~v~~S 131 (668)
.+.|+||-+||.... ...+..+.+..|+.-.+.+.+.+.+..+. ..++.+|
T Consensus 79 --~~advViitaG~~~~--pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 79 --KDADYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp --TTCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred --ccccEEEeecCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 789999999997542 33456788899999999999999885422 3454555
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.14 E-value=0.00064 Score=56.29 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=72.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCc--cccCCC--cCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL--KNLIPS--KASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
|||.|+| +|++|+.++-.|+.++-..+++++|........ .++... ...........| .+. + .++|
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----l--~~ad 71 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----L--ADAD 71 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----G--TTCS
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----h--cccc
Confidence 6899999 599999999999998766689999975432111 111111 112233444444 332 2 6899
Q ss_pred EEEEcCccCCccc--ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 83 TIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 83 ~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
+||-+||...... ...+..+.+..|+.-.+.+.+.+++.++-..++.+|
T Consensus 72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt 122 (146)
T d1hyha1 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (146)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence 9999998643111 111234577889999999999998877444455444
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.10 E-value=0.00068 Score=55.85 Aligned_cols=113 Identities=15% Similarity=0.100 Sum_probs=73.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc--ccCCC--cCCCCeEEEE-ccCCCHHHHHHHhccCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK--NLIPS--KASSNFKFVK-GDIASADLVNFLLITESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~--~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~ 81 (668)
|||.|+|+ |.+|++++-.|+.++--.++.++|........+ ++... .......... .| .+. + .+.
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d---~~~----~--~~a 70 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD---YSL----L--KGS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC---GGG----G--TTC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC---HHH----h--ccc
Confidence 68999996 999999999999887566899999754221111 11110 0111222222 23 222 2 689
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+||-.||.... .-....+.+..|+.-...+.+.+.+.++-..++.+|
T Consensus 71 diVvitag~~~~--~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 71 EIIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp SEEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred cEEEEeccccCC--CCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 999999986542 224556788899999999999998877434444444
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.00068 Score=56.03 Aligned_cols=86 Identities=19% Similarity=0.161 Sum_probs=59.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHc-CC--ccccccc---------ccCC------------hhHHHHHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKE-GI--PFEYGKG---------RLED------------CSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~-g~--~v~~~~~---------D~~d------------~~~~~~~l~~~~~d~Vih~a 439 (668)
|||.|+|++|.+|++++-.|..+ +. ++.++.. |+.+ .... +.+++. |+||.+|
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~a--Dvvvita 77 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGA--DVVLISA 77 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTC--SEEEECC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCC--CEEEECC
Confidence 79999999999999999877543 43 3322211 1110 1112 245555 9999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCC
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~ 477 (668)
|... ....+..+.+..|......+.+.+.+++-
T Consensus 78 G~~~-----k~g~~R~dl~~~N~~i~~~v~~~i~~~~p 110 (145)
T d2cmda1 78 GVRR-----KPGMDRSDLFNVNAGIVKNLVQQVAKTCP 110 (145)
T ss_dssp SCCC-----CTTCCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred CccC-----CCCcchhhHHHHHHHHHHHHHHHHHhhCC
Confidence 9652 22345567788999999999999999865
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.07 E-value=0.0011 Score=54.65 Aligned_cols=34 Identities=15% Similarity=0.334 Sum_probs=26.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHh--CCCCEEEEEcC
Q 005949 7 KNILITGAAGFIASHVCNRLIRN--YPEYKIVVLDK 40 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~--g~~~~v~~~~r 40 (668)
|||.|+||||++|+.|++.|+++ .+..++..++.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss 36 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST 36 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence 58999999999999999998864 23456665544
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.05 E-value=0.00032 Score=59.10 Aligned_cols=86 Identities=10% Similarity=0.008 Sum_probs=60.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-----c--ccccc-----------------------ccCChhHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-----F--EYGKG-----------------------RLEDCSSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-----v--~~~~~-----------------------D~~d~~~~~~~l~~~~~d 433 (668)
|||.|+||+|++|++++-.|...+.- + +.+.. ...........+++. |
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--d 82 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDA--D 82 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC--S
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccc--c
Confidence 79999999999999999999887641 0 00000 011112234566666 9
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG 476 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~ 476 (668)
+||-+||... ....+..+.++.|+.....+.+.+.++.
T Consensus 83 vViitaG~~~-----~pg~~r~dl~~~N~~i~~~~~~~i~k~a 120 (154)
T d1y7ta1 83 YALLVGAAPR-----KAGMERRDLLQVNGKIFTEQGRALAEVA 120 (154)
T ss_dssp EEEECCCCCC-----CTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEeecCcCC-----CCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999662 2234556677889999999999999864
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.02 E-value=0.00073 Score=55.82 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=61.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--cccccccc--cCChh----HHH--------------------HHhhhcCCCEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--PFEYGKGR--LEDCS----SLI--------------------ADVQSVKPTHV 435 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--~v~~~~~D--~~d~~----~~~--------------------~~l~~~~~d~V 435 (668)
|||.|+||+|.+|+.++..|..+|. ++.++..+ +...+ ++. +.+++ .|+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~--aDvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDE--SDVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTT--CSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhcc--ceEE
Confidence 7999999999999999999998885 33332211 00000 111 13333 4999
Q ss_pred EEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEe
Q 005949 436 FNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYA 483 (668)
Q Consensus 436 ih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~s 483 (668)
|-+||.... ...+..+.++.|..-...++....+++-+.+++-
T Consensus 79 VitAG~~~~-----~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 79 IITSGVPRK-----EGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp EECCSCCCC-----TTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEecccccC-----CCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 999996521 2234456788999999999999988865544443
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.0012 Score=51.49 Aligned_cols=69 Identities=12% Similarity=0.180 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
..||.|.| +|++|+-++....+. +++++++|+.... ..... --+++.+|..|.+.+.+.....++|+|-
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~l--G~~v~v~d~~~~~-PA~~v-------a~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRL--GVEVIAVDRYADA-PAMHV-------AHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTT--TCEEEEEESSTTC-GGGGG-------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHC--CCEEEEEcCCCCC-chhhc-------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 46899999 599999999998888 7899999986432 11111 2367899999999998887555789885
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.94 E-value=0.00088 Score=56.27 Aligned_cols=119 Identities=19% Similarity=0.141 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhC-----CCCEEEEEcCCCccCCccccCC---CcCCCCeEEEEccCCCHHHHHHHh
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNY-----PEYKIVVLDKLDYCSNLKNLIP---SKASSNFKFVKGDIASADLVNFLL 76 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g-----~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~ 76 (668)
+++||.|+||+|.+|++++-.|++.+ ....+.++|........+.+.. .........+..--.+. +.+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~ 77 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE----IAF 77 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----HHT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc----ccc
Confidence 46799999999999999999998642 1235666665433222222211 11122333333222222 333
Q ss_pred ccCCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCc-EEEEEc
Q 005949 77 ITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR-RFIHVS 131 (668)
Q Consensus 77 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~v~~S 131 (668)
.+.|+||-+||..... .....+.+..|+.-.+.+.+.+.+..+-. .++.+|
T Consensus 78 --~~~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 78 --KDLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp --TTCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred --CCceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 6899999999975432 23445678899999999998887753223 344444
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.94 E-value=0.00091 Score=58.05 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=53.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
.|+|||+|| |++|+++++.|.++ +++|++.+|.... ...+... .........+..+.......+ ...|.++
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~--g~~V~v~dr~~~~--a~~l~~~--~~~~~~~~~~~~~~~~~~~~i--~~~~~~i 72 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDS--GIKVTVACRTLES--AKKLSAG--VQHSTPISLDVNDDAALDAEV--AKHDLVI 72 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTT--TCEEEEEESCHHH--HHHHHTT--CTTEEEEECCTTCHHHHHHHH--TTSSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECChHH--HHHHHhc--ccccccccccccchhhhHhhh--hccceeE
Confidence 479999986 99999999999999 6789999997532 2222111 234555667777777777777 6678888
Q ss_pred EcC
Q 005949 86 HFA 88 (668)
Q Consensus 86 h~a 88 (668)
.+.
T Consensus 73 ~~~ 75 (182)
T d1e5qa1 73 SLI 75 (182)
T ss_dssp ECS
T ss_pred eec
Confidence 654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.93 E-value=0.0022 Score=53.53 Aligned_cols=118 Identities=18% Similarity=0.117 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCc--cccCCCc--CCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNL--KNLIPSK--ASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
+++||.|+|+ |.+|+.++-.|...+. .+++++|........ .++.... ....... .+. .+ ..+++ .+
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~-~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~~-~~---~~~~~--~~ 76 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-RAE-YS---YEAAL--TG 76 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-EEE-CS---HHHHH--TT
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCC-ceEEEEEeccccchhHHHHHhhhccccCCeeEE-ecc-Cc---hhhhh--cC
Confidence 3579999997 9999999988888753 489999875421111 1111000 0111111 111 11 12334 68
Q ss_pred CCEEEEcCccCCccc---ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcC
Q 005949 81 IDTIMHFAAQTHVDN---SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS 132 (668)
.|+|+-+||...... ......+.+..|+.-.+.+++.+.+.++ +-++.+-|
T Consensus 77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p-~aiviivs 130 (154)
T d1pzga1 77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCP-KTFIIVVT 130 (154)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECC
T ss_pred CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCC-CcEEEEeC
Confidence 999999998754321 1124457888999999999999998874 44444433
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.92 E-value=0.0018 Score=52.92 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=53.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|+++|+|+ |.+|+.+++.|.++ +++|++++... ...+.+ .......+.+|.++++.+.++- -.++|.||-
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~--g~~vvvid~d~--~~~~~~----~~~~~~~~~gd~~~~~~l~~a~-i~~a~~vi~ 70 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRM--GHEVLAVDINE--EKVNAY----ASYATHAVIANATEENELLSLG-IRNFEYVIV 70 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESCH--HHHHHT----TTTCSEEEECCTTCTTHHHHHT-GGGCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCeEEEecCcH--HHHHHH----HHhCCcceeeecccchhhhccC-CccccEEEE
Confidence 57899975 99999999999999 67777787743 222222 2345678899999999998772 257898875
Q ss_pred cCc
Q 005949 87 FAA 89 (668)
Q Consensus 87 ~a~ 89 (668)
+..
T Consensus 71 ~~~ 73 (134)
T d2hmva1 71 AIG 73 (134)
T ss_dssp CCC
T ss_pred EcC
Confidence 543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.90 E-value=0.0022 Score=53.52 Aligned_cols=96 Identities=20% Similarity=0.180 Sum_probs=64.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCC-------------------------hhHHHHHhhhcCCCEEEE
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED-------------------------CSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d-------------------------~~~~~~~l~~~~~d~Vih 437 (668)
++||.|.|+ |.+|+.++..|...+.. +++-.|+.. ....+..+++. |+|+-
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~a--diVvi 82 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGA--DCVIV 82 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTC--SEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCC--CeEEE
Confidence 369999996 99999999888888852 222222211 11233456666 99999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEE
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNY 482 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~ 482 (668)
+||....|+-........+.+..|+.....+++.+.+++.+-+++
T Consensus 83 tag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivi 127 (154)
T d1pzga1 83 TAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127 (154)
T ss_dssp CCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEE
Confidence 999764332222223455677899999999999999988753433
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.78 E-value=0.00045 Score=57.21 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHh-CCCCEEEEEcC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRN-YPEYKIVVLDK 40 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~-g~~~~v~~~~r 40 (668)
+|+|.|+||||++|+.+++.|.++ .+..++..+..
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s 37 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 37 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence 579999999999999999999765 35677776644
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.77 E-value=0.00066 Score=56.17 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=23.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP 409 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~ 409 (668)
|||.|.||||++|+.|++.|.+++|.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP 28 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFP 28 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 89999999999999999999877763
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.76 E-value=0.00073 Score=55.23 Aligned_cols=29 Identities=28% Similarity=0.305 Sum_probs=25.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG 413 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~ 413 (668)
|||+|.|+ |.+|+.+++.|.+.|++|.++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vi 29 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLI 29 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCccee
Confidence 79999996 999999999999999976443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.72 E-value=0.0016 Score=55.58 Aligned_cols=93 Identities=9% Similarity=-0.021 Sum_probs=62.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-----cccccccccCC-------------------------hhHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-----PFEYGKGRLED-------------------------CSSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-----~v~~~~~D~~d-------------------------~~~~~~~l~~~~~d 433 (668)
.||.|+||+|.||.+++-.|+.... .+.+.-.|+.. .....+.+++. |
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~a--D 102 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV--D 102 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC--S
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCC--c
Confidence 5899999999999999998887532 12222122111 12233455555 9
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHcC---CcEEEEe
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHG---ILMMNYA 483 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~---~~~v~~s 483 (668)
+||-+||.. +.......+.++.|......+.+++.++. ++++++|
T Consensus 103 vVvi~ag~~-----rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 103 WALLIGAKP-----RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp EEEECCCCC-----CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred eEEEeeccC-----CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 999999965 22345566778899999999999999973 3444443
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.60 E-value=0.0021 Score=53.27 Aligned_cols=116 Identities=18% Similarity=0.116 Sum_probs=71.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc--ccCCC--cCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK--NLIPS--KASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
++||-|+|+ |.+|+.++-.|...+ -.++.++|+.......+ ++... ....+......+ +.+. + .+.
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~-l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~----~--~~a 72 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN-LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD----L--AGA 72 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG----G--TTC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc----c--CCC
Confidence 468999995 999999998777765 35899999754321111 11110 011122232222 2222 2 679
Q ss_pred CEEEEcCccCCccc---ccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 82 DTIMHFAAQTHVDN---SFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 82 d~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+|+-+||...... ...+..+.+..|+.-.+.+.+.+++.++-..++.+|
T Consensus 73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt 125 (150)
T d1t2da1 73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 125 (150)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99999999654321 112355788999999999999999887434445444
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.55 E-value=0.0013 Score=54.07 Aligned_cols=82 Identities=15% Similarity=0.089 Sum_probs=49.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcC-Ccc---cc------------cccc-cCChh-HHHHHhhhcCCCEEEEcccccCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEG-IPF---EY------------GKGR-LEDCS-SLIADVQSVKPTHVFNAAGVTGRP 445 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g-~~v---~~------------~~~D-~~d~~-~~~~~l~~~~~d~Vih~a~~~~~~ 445 (668)
|||.|.|||||.|+.|++.|+++. |.+ .. ...+ ....+ .-.+.++++ |+||-++.-.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~--DvvF~alp~~--- 75 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQL--DAVITCQGGS--- 75 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTC--SEEEECSCHH---
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccc--cEEEEecCch---
Confidence 799999999999999999888653 322 00 1111 11100 111234555 9999998622
Q ss_pred CccccccccccceehhhhhhHHHHHHHHHcCCcEEEEecceeE
Q 005949 446 NVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYATGCIF 488 (668)
Q Consensus 446 ~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy 488 (668)
-+..+...+.+.|.+.++++-|+-|
T Consensus 76 ------------------~s~~~~~~l~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 76 ------------------YTEKVYPALRQAGWKGYWIDAASTL 100 (147)
T ss_dssp ------------------HHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred ------------------HHHHHhHHHHHcCCceEEEeCCccc
Confidence 1345677777788775556554444
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.54 E-value=0.0056 Score=51.11 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
+++||.|+||.|.+|+++++.|.++ +++|.+.|+.
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~ 42 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDRE 42 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTT
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEecccc
Confidence 4679999999999999999999999 6788888875
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.52 E-value=0.0069 Score=45.54 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=50.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
.+++|+|+|.|. |-.|.++++.|.++ +.+|++.|..........+ ........+.. +.+.+ .++|
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~------~~~d 66 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKL-----PEAVERHTGSL-NDEWL------MAAD 66 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGS-----CTTSCEEESBC-CHHHH------HHCS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHH-----hhccceeeccc-chhhh------ccCC
Confidence 467899999995 88999999999999 6788888876543333222 23444555543 23322 3579
Q ss_pred EEEEcCccC
Q 005949 83 TIMHFAAQT 91 (668)
Q Consensus 83 ~Vih~a~~~ 91 (668)
.||-.-|..
T Consensus 67 ~vi~SPGi~ 75 (93)
T d2jfga1 67 LIVASPGIA 75 (93)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCC
Confidence 999877753
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.48 E-value=0.0006 Score=60.55 Aligned_cols=46 Identities=24% Similarity=0.273 Sum_probs=36.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQS 429 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~ 429 (668)
|||.|+||+|.+|++|++.|.+.||+|.+..+|-...+++.+.+..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~ 46 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR 46 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence 7999999999999999999999999998887665444444444443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.47 E-value=0.0026 Score=54.88 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=27.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVL 38 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~ 38 (668)
|+||.|+|||||.|+.|++.|.++ +.+++..+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l 32 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITAL 32 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhC-CCCceEee
Confidence 579999999999999999988774 57777654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.45 E-value=0.0021 Score=53.83 Aligned_cols=56 Identities=20% Similarity=0.269 Sum_probs=43.2
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
..|+||.|.||.|.+|+.|++.|.+.||+|..+..+ ........+++. |.++.+..
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~--~~~~~~~~~~~~--~~v~~~~~ 62 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRE--DWAVAESILANA--DVVIVSVP 62 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT--CGGGHHHHHTTC--SEEEECSC
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccc--cccccchhhhhc--cccccccc
Confidence 456799999999999999999999999988776444 334444555555 88887765
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.44 E-value=0.0063 Score=51.66 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=30.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCc
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY 43 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~ 43 (668)
|||+|+|+ |.+|+.++..|.+. +++|++++|...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~--G~~V~~~~r~~~ 34 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQ--GHEVQGWLRVPQ 34 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred CEEEEECc-CHHHHHHHHHHHHC--CCceEEEEcCHH
Confidence 69999996 99999999999998 678999988653
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.43 E-value=0.0055 Score=50.25 Aligned_cols=112 Identities=20% Similarity=0.144 Sum_probs=66.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCcc--ccCCC--cCCCCeEEE-EccCCCHHHHHHHhccCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLK--NLIPS--KASSNFKFV-KGDIASADLVNFLLITESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~--~~~~~--~~~~~~~~~-~~Dl~d~~~~~~~~~~~~~ 81 (668)
+||.|+|+ |.+|+.++-.|+.++ -.+++++|......... ++... .......+. ..| ++. + .+.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~-l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d---~~~----~--~~a 70 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN---YAD----T--ANS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC---GGG----G--TTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC-cceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc---HHH----h--cCC
Confidence 68999995 999999999888875 34899998754321111 11100 011122222 233 222 2 679
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+||-+||..... .....+.+..|+.-.+.+++...+.++-..++.+|
T Consensus 71 dvvvitag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 71 DVIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp SEEEECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred CEEEEeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence 9999999975421 23445677899999999999999877434444433
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.43 E-value=0.0017 Score=56.03 Aligned_cols=25 Identities=24% Similarity=0.425 Sum_probs=23.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG 407 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g 407 (668)
||||.|.|||||.|+.|++.|.++.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP 25 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHP 25 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT
T ss_pred CcEEEEECcccHHHHHHHHHHHhCC
Confidence 7999999999999999999999874
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.38 E-value=0.006 Score=49.22 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=51.1
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccccc-ccccCChhHHHHHhhhcCCCEEEEcccccCCCCccccccccccceehhhh
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYG-KGRLEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHKTDTIRTNVA 463 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~-~~D~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~ 463 (668)
||.|.|++|-.|+.+++.+.+.. ++++. ..|..+... .+...++|+||.+... .
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~-~~~l~~~~d~~~~~~---~~~~~~~DvvIDFS~p---------------------~ 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAAD-DLTLSAELDAGDPLS---LLTDGNTEVVIDFTHP---------------------D 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHST-TSEEEEEECTTCCTH---HHHTTTCSEEEECCCT---------------------T
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCchh---hhccccCCEEEEcccH---------------------H
Confidence 79999999999999999877654 23222 224333222 3334467999999752 3
Q ss_pred hhHHHHHHHHHcCCcEEEEec
Q 005949 464 GTLTLADVCRDHGILMMNYAT 484 (668)
Q Consensus 464 ~~~~ll~~~~~~~~~~v~~sS 484 (668)
++...++.|.++++++|.=+|
T Consensus 56 ~~~~~~~~~~~~~~~~ViGTT 76 (135)
T d1yl7a1 56 VVMGNLEFLIDNGIHAVVGTT 76 (135)
T ss_dssp THHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEecc
Confidence 466789999999988665444
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.31 E-value=0.0081 Score=53.41 Aligned_cols=78 Identities=14% Similarity=0.082 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcC----------------CChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccC
Q 005949 3 TYTPKNILITGA----------------AGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI 66 (668)
Q Consensus 3 ~~~~~~vLVtGg----------------tG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl 66 (668)
-+++++||||+| ||..|.+|++.+..+ |.+|+++.-.... ..+..+..+..
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~--Ga~V~li~g~~~~---------~~p~~~~~~~~-- 69 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVSL---------PTPPFVKRVDV-- 69 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCCC---------CCCTTEEEEEC--
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHc--CCchhhhhccccc---------Cccccccccee--
Confidence 457899999976 799999999999999 6777777653211 11235555543
Q ss_pred CCHHHHHHHhc--cCCCCEEEEcCccCCc
Q 005949 67 ASADLVNFLLI--TESIDTIMHFAAQTHV 93 (668)
Q Consensus 67 ~d~~~~~~~~~--~~~~d~Vih~a~~~~~ 93 (668)
...+.+.+.+. ..++|++|++|+..+.
T Consensus 70 ~t~~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 70 MTALEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp CSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred hhhHHHHHHHHhhhccceeEeeeechhhh
Confidence 44444443331 1478999999998764
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.30 E-value=0.0042 Score=53.72 Aligned_cols=109 Identities=17% Similarity=0.085 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
++.+|||+||+|.+|...++..... +.+|+++.++... .+.+.. ......+..-|-...+.+.+.....++|+|
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~--~~~~~~--~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v 102 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEK--IAYLKQ--IGFDAAFNYKTVNSLEEALKKASPDGYDCY 102 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHH--HHHHHH--TTCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHH--HHHHHh--hhhhhhcccccccHHHHHHHHhhcCCCcee
Confidence 3579999999999999999988877 7899988875421 111111 111222222333444555555556789999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccCCCC
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg~~~ 140 (668)
|++.|.. .....++.++.. .+++.+.....|+...
T Consensus 103 ~D~vG~~------------------~~~~~~~~l~~~---G~~v~~G~~~~~~~~~ 137 (182)
T d1v3va2 103 FDNVGGE------------------FLNTVLSQMKDF---GKIAICGAISVYNRMD 137 (182)
T ss_dssp EESSCHH------------------HHHHHGGGEEEE---EEEEECCCGGGTTCTT
T ss_pred EEecCch------------------hhhhhhhhccCC---CeEEeecceeeccccc
Confidence 9998731 113444555543 4788887776665543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.24 E-value=0.0017 Score=57.38 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=30.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||.|+||+|.+|++|++.|++. +++|++.+|..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 58999999999999999999999 78888888853
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.24 E-value=0.0022 Score=53.74 Aligned_cols=85 Identities=11% Similarity=0.031 Sum_probs=58.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-----cccccccccCCh-------------------------hHHHHHhhhcCCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-----PFEYGKGRLEDC-------------------------SSLIADVQSVKPT 433 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-----~v~~~~~D~~d~-------------------------~~~~~~l~~~~~d 433 (668)
|||.|+||+|.+|++++-.|...+. .+.+.-.|+... ....+.+++. |
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d 81 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDL--D 81 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTC--S
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCc--e
Confidence 7999999999999999998876542 122222222111 1123345555 9
Q ss_pred EEEEcccccCCCCccccccccccceehhhhhhHHHHHHHHHc
Q 005949 434 HVFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDH 475 (668)
Q Consensus 434 ~Vih~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~ 475 (668)
+||-++|... ....+..+.++.|..-...+.+.+.++
T Consensus 82 vVVitag~~~-----~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 82 VAILVGSMPR-----RDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp EEEECCSCCC-----CTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccCC-----CCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 9999999652 223455567889999999999999876
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.16 E-value=0.0064 Score=50.04 Aligned_cols=85 Identities=19% Similarity=0.222 Sum_probs=54.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--cccccccccCChh------HHH----------------HHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--PFEYGKGRLEDCS------SLI----------------ADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--~v~~~~~D~~d~~------~~~----------------~~l~~~~~d~Vih~a 439 (668)
|||.|.|+ |++|+.++..|..+|. ++.++ |+.... ++. +.+++ .|+||.+|
T Consensus 6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~--D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~--adivvita 80 (146)
T d1ez4a1 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIV--DVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKD--ADLVVITA 80 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE--CSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTT--CSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEe--ecccchhHHHHHHHhccccccCCceEeeccHHHhcc--ccEEEEec
Confidence 79999995 9999999999999984 33333 221100 000 12344 49999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
|.. .....+..+.+..|+.....+++.+.+++.+
T Consensus 81 g~~-----~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~ 114 (146)
T d1ez4a1 81 GAP-----QKPGESRLDLVNKNLNILSSIVKPVVDSGFD 114 (146)
T ss_dssp CC---------------CHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccc-----cCCCCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 855 2223455667789999999999999998764
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.15 E-value=0.0063 Score=49.68 Aligned_cols=87 Identities=17% Similarity=0.088 Sum_probs=59.9
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccccccccCChh--------HHHH----------------HhhhcCCCEEEEccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS--------SLIA----------------DVQSVKPTHVFNAAG 440 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~--------~~~~----------------~l~~~~~d~Vih~a~ 440 (668)
||.|+|++|.+|+.++-.|..++.-=+++-.|+.+.+ ++.+ .+++ .|+|+-+||
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~--aDiVvitaG 79 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAG--SDVVVITAG 79 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTT--CSEEEECCC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhh--cCEEEEecc
Confidence 7999999999999999999999863222323321100 1111 1233 499999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
... ....+..+.++.|..-...+.+.+.+++-+
T Consensus 80 ~~~-----~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~ 112 (142)
T d1o6za1 80 IPR-----QPGQTRIDLAGDNAPIMEDIQSSLDEHNDD 112 (142)
T ss_dssp CCC-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred ccc-----ccCCchhhHHHHHHHHHHHHHHHHHhcCCC
Confidence 552 122345567889999999999999998753
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.10 E-value=0.0045 Score=52.67 Aligned_cols=34 Identities=29% Similarity=0.326 Sum_probs=28.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK 40 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r 40 (668)
|+||.|+||||++|+.|++.|.+ ++.+++..+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s 34 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKN-HPEAKITYLSS 34 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEEC
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-CCCceEEEeec
Confidence 56999999999999999997776 45788876643
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.09 E-value=0.0035 Score=54.12 Aligned_cols=35 Identities=23% Similarity=0.508 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEc
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLD 39 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~ 39 (668)
.++.||.|+||||+.|+.|++.|.++ +.+++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhC-CCceEEEEe
Confidence 45679999999999999999988874 678877664
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.97 E-value=0.0056 Score=47.57 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=43.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc----------------ccccccCChhHHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE----------------YGKGRLEDCSSLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~----------------~~~~D~~d~~~~~~~l~~~~~d~Vih 437 (668)
.||.|.| +|.+|+-|+....+.|+++. ++.+|..|.+.+.++...+++|+|-.
T Consensus 12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 5899999 79999999999999999763 44566778888888887777898853
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.96 E-value=0.014 Score=46.57 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=24.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVV 37 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~ 37 (668)
|||.|.|++|-+|+.|.+.+.++ +++++.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~ 29 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVL 29 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEE
Confidence 58999999999999999888777 566653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=95.96 E-value=0.016 Score=45.27 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
.++++|||+| +|-+|..-++.|++. +.+|++++...... ...+ ....++++......+.+ + .+++.
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~--ga~v~v~~~~~~~~-~~~~---~~~~~i~~~~~~~~~~d-----l--~~~~l 75 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEA--GARLTVNALTFIPQ-FTVW---ANEGMLTLVEGPFDETL-----L--DSCWL 75 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHT--TBEEEEEESSCCHH-HHHH---HTTTSCEEEESSCCGGG-----G--TTCSE
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHC--CCeEEEEeccCChH-HHHH---HhcCCceeeccCCCHHH-----h--CCCcE
Confidence 4579999999 599999999999999 67787777643221 1111 12346777776665433 2 56788
Q ss_pred EEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcC
Q 005949 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
Q Consensus 84 Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS 132 (668)
|+-+.+.. .-...+.+.|++.+ .+|.+..
T Consensus 76 v~~at~d~-----------------~~n~~i~~~a~~~~---ilVNv~D 104 (113)
T d1pjqa1 76 AIAATDDD-----------------TVNQRVSDAAESRR---IFCNVVD 104 (113)
T ss_dssp EEECCSCH-----------------HHHHHHHHHHHHTT---CEEEETT
T ss_pred EeecCCCH-----------------HHHHHHHHHHHHcC---CEEEeCC
Confidence 87554321 01245677888755 5677654
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.92 E-value=0.014 Score=48.04 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=58.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh------hHH-----------------HHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC------SSL-----------------IADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~------~~~-----------------~~~l~~~~~d~Vih~a~ 440 (668)
.||.|+|+ |++|+.++..|..+|.-=+++-.|+... .++ .+.++++ |+||.+||
T Consensus 7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~da--Dvvvitag 83 (148)
T d1ldna1 7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDA--DLVVICAG 83 (148)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTC--SEEEECCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccc--eeEEEecc
Confidence 58999996 9999999999999986211222222110 001 1234444 99999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCC
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~ 477 (668)
.. ........+.+..|+.....+++.+.+++.
T Consensus 84 ~~-----~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p 115 (148)
T d1ldna1 84 AN-----QKPGETRLDLVDKNIAIFRSIVESVMASGF 115 (148)
T ss_dssp CC-----CCTTTCSGGGHHHHHHHHHHHHHHHHHHTC
T ss_pred cc-----cccCcchhHHHHHHHHHHHHHHHHHHhhCC
Confidence 55 222345567778999999999999999875
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.92 E-value=0.028 Score=44.83 Aligned_cols=90 Identities=16% Similarity=0.249 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCC---ChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCC
Q 005949 4 YTPKNILITGAA---GFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITES 80 (668)
Q Consensus 4 ~~~~~vLVtGgt---G~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (668)
+..++|.|+|+| |..|..+.+.|.+.+ ..+|+.+.+... .. .++. ..-++.|.. ..
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~--~i---------~G~~-~y~sl~dlp--------~~ 64 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEE--EV---------QGVK-AYKSVKDIP--------DE 64 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCS--EE---------TTEE-CBSSTTSCS--------SC
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCcc--cc---------CCeE-eecchhhcC--------CC
Confidence 467899999998 999999999987654 679999887421 11 1111 122333321 56
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCc
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD 133 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~ 133 (668)
+|.++-+... ..+..+++.|.+.| ++.++.+|+.
T Consensus 65 vDlvvi~vp~------------------~~~~~~~~~~~~~g-~~~~vi~s~G 98 (129)
T d2csua1 65 IDLAIIVVPK------------------RFVKDTLIQCGEKG-VKGVVIITAG 98 (129)
T ss_dssp CSEEEECSCH------------------HHHHHHHHHHHHHT-CCEEEECCCS
T ss_pred CceEEEecCh------------------HHhHHHHHHHHHcC-CCEEEEeccc
Confidence 8988855421 12355677777777 8888888863
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.86 E-value=0.0056 Score=52.04 Aligned_cols=26 Identities=27% Similarity=0.289 Sum_probs=23.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGI 408 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~ 408 (668)
||||.|.||||+.|+.|++.|.++.+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~ 26 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPE 26 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCC
Confidence 78999999999999999999998753
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.84 E-value=0.011 Score=48.68 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=59.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh------------hH------------HHHHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC------------SS------------LIADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~------------~~------------~~~~l~~~~~d~Vih~a 439 (668)
+||.|.|+ |.+|+.++..|..++.. ++.-.|+... .. ..+.+++ .|+|+-+|
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~-el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~--advvvita 79 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAG--ADVVIVTA 79 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTT--CSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCC--CcEEEEec
Confidence 69999995 99999999888777642 3333333211 00 0112333 49999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
|....|+......+....+..|+.....+++.+++++-+
T Consensus 80 g~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~ 118 (150)
T d1t2da1 80 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPN 118 (150)
T ss_dssp SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 976333222222345566789999999999999998753
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.82 E-value=0.011 Score=50.85 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=27.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D 416 (668)
++|+|.|+ |++|+++++.|.++||+|.++..+
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~ 34 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT 34 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC
Confidence 58999985 999999999999999988666544
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.79 E-value=0.0034 Score=53.86 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHH---HHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADL---VNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~ 81 (668)
.+.+|||+||+|.+|...++.+... +.+|+++++++. ..+.... .+... ..|..+.+. +.+.....++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~--~~~~~~~----~Ga~~-vi~~~~~~~~~~i~~~t~~~g~ 98 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEE--GQKIVLQ----NGAHE-VFNHREVNYIDKIKKYVGEKGI 98 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHH--HHHHHHH----TTCSE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred CCCEEEEEecccccccccccccccc--Cccccccccccc--ccccccc----cCccc-ccccccccHHHHhhhhhccCCc
Confidence 3579999999999999999988777 678888876532 1111111 12222 235555433 3344445679
Q ss_pred CEEEEcCc
Q 005949 82 DTIMHFAA 89 (668)
Q Consensus 82 d~Vih~a~ 89 (668)
|+||++.|
T Consensus 99 d~v~d~~g 106 (174)
T d1yb5a2 99 DIIIEMLA 106 (174)
T ss_dssp EEEEESCH
T ss_pred eEEeeccc
Confidence 99999876
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=95.77 E-value=0.0051 Score=50.54 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=56.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--cccccccccCChh------------------------HHHHHhhhcCCCEEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--PFEYGKGRLEDCS------------------------SLIADVQSVKPTHVFN 437 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--~v~~~~~D~~d~~------------------------~~~~~l~~~~~d~Vih 437 (668)
|||.|+|+ |.+|+.++..|...|. ++.++ |+.+.. .-.+.++++ |+|+-
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~--Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~da--dvvvi 75 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLL--DVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANS--DIVII 75 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE--CSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTC--SEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEe--ccccccchhhhhhhhcccchhcccceEEecCCHHHhcCC--eEEEE
Confidence 79999995 9999999999999874 22222 221100 001134444 99999
Q ss_pred cccccCCCCccccccccccceehhhhhhHHHHHHHHHcCC
Q 005949 438 AAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477 (668)
Q Consensus 438 ~a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~ 477 (668)
+||.... ......+.++.|..-...+++.+.+++-
T Consensus 76 tag~~~~-----~g~~r~~l~~~N~~i~~~i~~~i~~~~p 110 (142)
T d1guza1 76 TAGLPRK-----PGMTREDLLMKNAGIVKEVTDNIMKHSK 110 (142)
T ss_dssp CCSCCCC-----TTCCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred EEecCCC-----CCCchHHHHHHHHHHHHHHHHHhhccCC
Confidence 9996521 1223456677899999999999998865
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.66 E-value=0.0093 Score=51.47 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHH---HHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADL---VNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~d 82 (668)
+.+|||+||+|.+|...++.+... +.++++..+... ..+.+.. .+... ..|..+.+. +.+.....++|
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~--~~~~l~~----~Ga~~-vi~~~~~~~~~~v~~~t~~~g~d 96 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDA--KREMLSR----LGVEY-VGDSRSVDFADEILELTDGYGVD 96 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHH--HHHHHHT----TCCSE-EEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCEEEEECCCCCcccccchhhccc--cccceeeecccc--ccccccc----ccccc-cccCCccCHHHHHHHHhCCCCEE
Confidence 579999999999999999988888 688888776532 1222211 12222 234444433 33333346799
Q ss_pred EEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccc
Q 005949 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV 135 (668)
Q Consensus 83 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v 135 (668)
+||++.|.. .....++.++.. .++|.++....
T Consensus 97 ~v~d~~g~~------------------~~~~~~~~l~~~---G~~v~~G~~~~ 128 (183)
T d1pqwa_ 97 VVLNSLAGE------------------AIQRGVQILAPG---GRFIELGKKDV 128 (183)
T ss_dssp EEEECCCTH------------------HHHHHHHTEEEE---EEEEECSCGGG
T ss_pred EEEecccch------------------HHHHHHHHhcCC---CEEEEEccCCC
Confidence 999998731 113344555553 48888765443
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.57 E-value=0.0053 Score=52.43 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=56.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCH-HHHHHHhccCCCCEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASA-DLVNFLLITESIDTI 84 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~~~d~V 84 (668)
+.+|||+||+|.+|...++..... +.+|++..+++.. .+... .. ... ..+ |..+. +.........++|+|
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k--~~~~~-~l-Ga~-~vi--~~~~~~~~~~~~~~~~gvD~v 102 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAE--HDYLR-VL-GAK-EVL--AREDVMAERIRPLDKQRWAAA 102 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTC--HHHHH-HT-TCS-EEE--ECC---------CCSCCEEEE
T ss_pred CCEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHH--HHHHH-hc-ccc-eee--ecchhHHHHHHHhhccCcCEE
Confidence 468999999999999999988887 7788887765421 11111 11 111 122 22221 112223344689999
Q ss_pred EEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCc
Q 005949 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD 133 (668)
Q Consensus 85 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~ 133 (668)
|++.|-... ...++.++.. .|+|.++..
T Consensus 103 id~vgg~~~------------------~~~l~~l~~~---Griv~~G~~ 130 (176)
T d1xa0a2 103 VDPVGGRTL------------------ATVLSRMRYG---GAVAVSGLT 130 (176)
T ss_dssp EECSTTTTH------------------HHHHHTEEEE---EEEEECSCC
T ss_pred EEcCCchhH------------------HHHHHHhCCC---ceEEEeecc
Confidence 999885321 3344555543 488887764
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.02 Score=47.81 Aligned_cols=96 Identities=14% Similarity=0.187 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEE-EcCCCccCCccccCCCc--CCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVV-LDKLDYCSNLKNLIPSK--ASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~-~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
..+||.|.|++|-+|+.+++.+.+.. +++++. +++......-.++-... ...++ .+.-|+. .++ ..+
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~-~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~-~~~~~~~------~~~--~~~ 72 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLLGSDAGELAGAGKTGV-TVQSSLD------AVK--DDF 72 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTCSCCTTCSSSSSCCSC-CEESCST------TTT--TSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecccchhccchhhhhhccccCCc-eeeccHH------HHh--ccc
Confidence 35699999999999999999998864 666653 34433221111111110 11122 2233332 233 579
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~ 130 (668)
|+||++.-+ .++...++.|.+.+ ..+|.=
T Consensus 73 DViIDFs~p------------------~~~~~~~~~a~~~~--~~~ViG 101 (162)
T d1diha1 73 DVFIDFTRP------------------EGTLNHLAFCRQHG--KGMVIG 101 (162)
T ss_dssp SEEEECSCH------------------HHHHHHHHHHHHTT--CEEEEC
T ss_pred ceEEEeccH------------------HHHHHHHHHHHhcc--ceeEEe
Confidence 999988532 24467788888876 445543
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.47 E-value=0.015 Score=47.34 Aligned_cols=86 Identities=21% Similarity=0.155 Sum_probs=57.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChh------HH----------------HHHhhhcCCCEEEEcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS------SL----------------IADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~------~~----------------~~~l~~~~~d~Vih~a~~ 441 (668)
|||.|.|+ |.+|..++-.|+.++.--++.-.|+.+.. ++ .+.+++. |+|+-+||.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~a--divvitag~ 77 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGS--DVVIVAAGV 77 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTC--SEEEECCCC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCC--CEEEEeccc
Confidence 79999996 99999999999988852122222222110 00 1134444 999999996
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCC
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~ 477 (668)
... ......+.+..|..-...+++.+.+++-
T Consensus 78 ~~~-----~g~~r~dl~~~N~~I~~~i~~~i~~~~p 108 (140)
T d1a5za1 78 PQK-----PGETRLQLLGRNARVMKEIARNVSKYAP 108 (140)
T ss_dssp CCC-----SSCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ccC-----CCcchhhhhccccchHHHHHHHHHhcCC
Confidence 521 1233445677899999999999999875
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=95.40 E-value=0.021 Score=47.41 Aligned_cols=76 Identities=13% Similarity=0.225 Sum_probs=54.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
-+|+|+|. |-+|..+++.|.+. +.++++++..+.. ...........++.++.||.+|++.+.++-- .+++.||-
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~--~~~v~vId~d~~~--~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i-~~a~~vi~ 77 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQR--GQNVTVISNLPED--DIKQLEQRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILA 77 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHT--TCCEEEEECCCHH--HHHHHHHHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEeccchh--HHHHHHHhhcCCcEEEEccCcchHHHHHhcc-ccCCEEEE
Confidence 46899985 99999999999998 6677777664311 0011111123578999999999999877732 57899986
Q ss_pred cC
Q 005949 87 FA 88 (668)
Q Consensus 87 ~a 88 (668)
+.
T Consensus 78 ~~ 79 (153)
T d1id1a_ 78 LS 79 (153)
T ss_dssp CS
T ss_pred cc
Confidence 64
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.36 E-value=0.037 Score=44.57 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=37.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccc------------------cccccCChhHHHHH-hhhcCCCEEEEccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEY------------------GKGRLEDCSSLIAD-VQSVKPTHVFNAAG 440 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~------------------~~~D~~d~~~~~~~-l~~~~~d~Vih~a~ 440 (668)
+++|.| .|.+|+.+++.|.++|++|.+ +.+|.++++.+.++ +.++ |+||-+.+
T Consensus 2 ~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a--~~vi~~~~ 73 (134)
T d2hmva1 2 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNF--EYVIVAIG 73 (134)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGC--SEEEECCC
T ss_pred EEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccc--cEEEEEcC
Confidence 578887 599999999999999997643 34556666655544 4443 66665544
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=95.28 E-value=0.025 Score=47.97 Aligned_cols=98 Identities=9% Similarity=0.026 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccC--CCHHHHHHHhc---cCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDI--ASADLVNFLLI---TES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~---~~~ 80 (668)
+.+|||+| +|.+|...++.+... +.+|+++++.... ++.. ... .... .+..|- .+.....+.+. ..+
T Consensus 27 g~~vlV~G-~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r--~~~a-~~~-ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 27 GTTVLVIG-AGPIGLVSVLAAKAY--GAFVVCTARSPRR--LEVA-KNC-GADV-TLVVDPAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHHH--HHHH-HHT-TCSE-EEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CCEEEEEc-ccccchhhHhhHhhh--cccccccchHHHH--HHHH-HHc-CCcE-EEeccccccccchhhhhhhcccccC
Confidence 57999997 799999999888777 6789999886421 1111 000 1122 223332 33333333332 257
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
+|+||+++|... .....++.++.. .++++++
T Consensus 99 ~D~vid~~g~~~-----------------~~~~a~~~~~~~---G~iv~~G 129 (170)
T d1e3ja2 99 PNVTIDCSGNEK-----------------CITIGINITRTG---GTLMLVG 129 (170)
T ss_dssp CSEEEECSCCHH-----------------HHHHHHHHSCTT---CEEEECS
T ss_pred CceeeecCCChH-----------------HHHHHHHHHhcC---CceEEEe
Confidence 999999987521 123345566653 4788776
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.25 E-value=0.01 Score=49.72 Aligned_cols=79 Identities=23% Similarity=0.173 Sum_probs=50.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC-Cccc---------ccccccC-----------ChhHHHHHhhhcCCCEEEEcccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG-IPFE---------YGKGRLE-----------DCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g-~~v~---------~~~~D~~-----------d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
.|||.|.|++|.+|+.+++.+.+.. .++. .+..|+. -..+++..+. ++|+||.+.-
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~--~~DViIDFs~- 80 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFDVFIDFTR- 80 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCSEEEECSC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhc--ccceEEEecc-
Confidence 4899999999999999999888764 2221 0111110 0111222333 3488888753
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEEEEec
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMMNYAT 484 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS 484 (668)
..++..+++.|.++++++|.=+|
T Consensus 81 --------------------p~~~~~~~~~a~~~~~~~ViGTT 103 (162)
T d1diha1 81 --------------------PEGTLNHLAFCRQHGKGMVIGTT 103 (162)
T ss_dssp --------------------HHHHHHHHHHHHHTTCEEEECCC
T ss_pred --------------------HHHHHHHHHHHHhccceeEEecC
Confidence 34567789999999988665555
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.22 E-value=0.07 Score=42.66 Aligned_cols=29 Identities=10% Similarity=0.236 Sum_probs=24.3
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEE
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVV 37 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~ 37 (668)
||.|+|++|-+|+.+++.+.+.. ++++..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~-~~~l~~ 29 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAAD-DLTLSA 29 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHST-TSEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCEEEE
Confidence 79999999999999999887753 677654
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.20 E-value=0.021 Score=46.50 Aligned_cols=86 Identities=14% Similarity=0.062 Sum_probs=57.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh-------------------------hHHHHHhhhcCCCEEEEc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC-------------------------SSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~-------------------------~~~~~~l~~~~~d~Vih~ 438 (668)
|||.|+|+ |.+|+.++-.|..+|.-=+++-.|+... .+. +.+++. |+||-.
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-~~~~~a--diVvit 76 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGS--EIIVVT 76 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-GGGTTC--SEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-HHhccc--cEEEEe
Confidence 79999995 9999999999998885211111222110 011 134444 999999
Q ss_pred ccccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 439 AGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 439 a~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
||... ....+..+.+..|..-...+++.+.+++-+
T Consensus 77 ag~~~-----~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~ 111 (142)
T d1ojua1 77 AGLAR-----KPGMTRLDLAHKNAGIIKDIAKKIVENAPE 111 (142)
T ss_dssp CCCCC-----CSSCCHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred ccccC-----CCCCchHHHHHHhhHHHHHHHHHHHhhCCC
Confidence 98552 222345566778999999999999998753
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.18 E-value=0.013 Score=52.03 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=36.8
Q ss_pred CcchhHHHHHHHHHcCCcccccccccC-------------ChhHHH----HHhhhcCCCEEEEccccc
Q 005949 392 TGWIGGLLGKLCEKEGIPFEYGKGRLE-------------DCSSLI----ADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 392 ~G~iG~~l~~~l~~~g~~v~~~~~D~~-------------d~~~~~----~~l~~~~~d~Vih~a~~~ 442 (668)
||..|.+|++++..+|++|.++.+-.. ..+++. +.+.. .|++|++|+.+
T Consensus 31 SGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~~~~~~--~D~~i~aAAvs 96 (223)
T d1u7za_ 31 SGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQ--QNIFIGCAAVA 96 (223)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHHGGG--CSEEEECCBCC
T ss_pred cHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHHhhhcc--ceeEeeeechh
Confidence 899999999999999999988766422 233333 33344 59999999976
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.08 E-value=0.057 Score=44.68 Aligned_cols=87 Identities=14% Similarity=0.010 Sum_probs=59.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChh------HH-----------------HHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS------SL-----------------IADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~------~~-----------------~~~l~~~~~d~Vih~a~ 440 (668)
.||.|+|+ |.+|+.++-.|..+|.-=+++-.|+.... ++ .+.++++ |+|+.+||
T Consensus 21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~a--diVVitAg 97 (160)
T d1i0za1 21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANS--KIVVVTAG 97 (160)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTC--SEEEECCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccc--cEEEEecC
Confidence 59999995 99999999999999872222222222110 01 1124444 99999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
... ....+..+.++.|+.....++..+.+.+.+
T Consensus 98 ~~~-----~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~ 130 (160)
T d1i0za1 98 VRQ-----QEGESRLNLVQRNVNVFKFIIPQIVKYSPD 130 (160)
T ss_dssp CCC-----CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred Ccc-----ccCcchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 662 223345567789999999999999998764
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.05 E-value=0.034 Score=46.04 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=24.7
Q ss_pred eEEEEcCCChhHHHHHHHHHHhC-CCCEEEEEc
Q 005949 8 NILITGAAGFIASHVCNRLIRNY-PEYKIVVLD 39 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g-~~~~v~~~~ 39 (668)
||.|+|||||+|..|++.|.++. +..++..+.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 79999999999999999777653 344555544
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=94.94 E-value=0.021 Score=49.12 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.|||.|+|+ |.+|..++..|.++ +++|++.+|..
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~--G~~V~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 379999995 99999999999999 67899999864
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.94 E-value=0.02 Score=50.19 Aligned_cols=30 Identities=20% Similarity=0.364 Sum_probs=26.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
|||.|.| .||+|..++..|++.||+|..+.
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D 30 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVD 30 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEe
Confidence 7999996 89999999999999999875443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=94.74 E-value=0.015 Score=47.57 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=56.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC--ccccccc----------ccCC----------hhHHHHHhhhcCCCEEEEcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI--PFEYGKG----------RLED----------CSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~--~v~~~~~----------D~~d----------~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
.||.|+|+ |.+|..++-.|+.++. ++.++.. |+.+ ...-...++++ |+|+-+||.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~a--divvitag~ 78 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDC--DVIVVTAGA 78 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTC--SEEEECCCC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCC--ceEEEeccc
Confidence 48999996 9999999999999886 2222211 1111 00011234444 999999995
Q ss_pred cCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 442 TGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
. .....+..+.+..|+.-...+++.+.+++-+
T Consensus 79 ~-----~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ 110 (142)
T d1y6ja1 79 N-----RKPGETRLDLAKKNVMIAKEVTQNIMKYYNH 110 (142)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred c-----cCcCcchhHHhhHHHHHHHHHHHHhhccCCC
Confidence 5 2223445567789999999999999998764
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.01 Score=50.99 Aligned_cols=76 Identities=9% Similarity=0.012 Sum_probs=50.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHH---HHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASAD---LVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~~d 82 (668)
+.+|||+||+|.+|..+++..... +.+|++.+++... .+.+.. .+... ..|..+.+ .+.++-...++|
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k--~~~~~~----lGa~~-vi~~~~~d~~~~v~~~t~g~g~d 99 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQK--AQSALK----AGAWQ-VINYREEDLVERLKEITGGKKVR 99 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHH--HHHHHH----HTCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCEEEEEccccccchHHHHHHHHh--CCeEeecccchHH--HHHHHh----cCCeE-EEECCCCCHHHHHHHHhCCCCeE
Confidence 579999999999999999988887 7899999886432 111111 12222 23555543 333333445789
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+|+++.+.
T Consensus 100 ~v~d~~g~ 107 (179)
T d1qora2 100 VVYDSVGR 107 (179)
T ss_dssp EEEECSCG
T ss_pred EEEeCccH
Confidence 99999874
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.73 E-value=0.012 Score=48.86 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=22.2
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCC
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGI 408 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~ 408 (668)
||.|.|||||+|..|++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999988865
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.67 E-value=0.019 Score=48.69 Aligned_cols=36 Identities=31% Similarity=0.344 Sum_probs=32.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|++|+|+| .|.+|..+++.|.+.|+.++|++.|+..
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~ 36 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence 46899997 6999999999999998888999999864
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=94.60 E-value=0.013 Score=50.43 Aligned_cols=27 Identities=15% Similarity=0.386 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcCC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEGI 408 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g~ 408 (668)
.++||.|.|||||.|+.|++.|.++.+
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~ 30 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQ 30 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSS
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCC
Confidence 347999999999999999999998753
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.54 E-value=0.082 Score=44.11 Aligned_cols=93 Identities=14% Similarity=0.131 Sum_probs=56.1
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCC-----------hhHHHHHhhhcCCCEEEEcccccCCCCc-cc-
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLED-----------CSSLIADVQSVKPTHVFNAAGVTGRPNV-DW- 449 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d-----------~~~~~~~l~~~~~d~Vih~a~~~~~~~~-~~- 449 (668)
|+||-+.| .|.+|..|++.|++.||+|..+..+-.. .....+.++.+ |+|+-+.... .. ..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~--diii~~v~~~---~~~~~v 74 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGA--DVVISMLPAS---QHVEGL 74 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSC--SEEEECCSCH---HHHHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhcccc--Ceeeecccch---hhHHHH
Confidence 67999997 8999999999999999988665433111 12233455544 7777765422 00 00
Q ss_pred --------ccc-cccccee---hhhhhhHHHHHHHHHcCCcEEE
Q 005949 450 --------CES-HKTDTIR---TNVAGTLTLADVCRDHGILMMN 481 (668)
Q Consensus 450 --------~~~-~~~~~~~---~Nv~~~~~ll~~~~~~~~~~v~ 481 (668)
... ...-+++ .....+..+.+.+++.|++++-
T Consensus 75 ~~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~d 118 (162)
T d3cuma2 75 YLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 118 (162)
T ss_dssp HHSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEe
Confidence 001 1122333 2234567788888888876653
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=94.53 E-value=0.0081 Score=50.29 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
.++++|||+|+ |-+|+.+++.|...| -.++++..|.... ...+... -+.+. .+.+.+.+.+ .++|+
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g-~~~i~v~nRt~~k--a~~l~~~---~~~~~-----~~~~~~~~~l--~~~Di 87 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRG-VRAVLVANRTYER--AVELARD---LGGEA-----VRFDELVDHL--ARSDV 87 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHC-CSEEEEECSSHHH--HHHHHHH---HTCEE-----CCGGGHHHHH--HTCSE
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcC-CcEEEEEcCcHHH--HHHHHHh---hhccc-----ccchhHHHHh--ccCCE
Confidence 46789999996 999999999999984 2378888886321 1111111 01222 2345566666 67999
Q ss_pred EEEcCccC
Q 005949 84 IMHFAAQT 91 (668)
Q Consensus 84 Vih~a~~~ 91 (668)
||.+.+..
T Consensus 88 vi~atss~ 95 (159)
T d1gpja2 88 VVSATAAP 95 (159)
T ss_dssp EEECCSSS
T ss_pred EEEecCCC
Confidence 99998754
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.51 E-value=0.0084 Score=49.15 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
||+|.|.|+||.||...+.-+.+....++|.++.-..
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 5789999999999999999887765568998886543
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=94.48 E-value=0.014 Score=49.58 Aligned_cols=74 Identities=9% Similarity=0.078 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.+.+|||+||+|-+|...++.+... +.+|++.+++.. ..+.... .+...+ .|..+ ...+.-...++|+|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~--~~~~~~~----lGa~~~-i~~~~--~~~~~~~~~g~D~v 95 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPE--KLALPLA----LGAEEA-ATYAE--VPERAKAWGGLDLV 95 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGG--GSHHHHH----TTCSEE-EEGGG--HHHHHHHTTSEEEE
T ss_pred CCCEEEEEeccccchhhhhhhhccc--cccccccccccc--ccccccc----ccccee-eehhh--hhhhhhcccccccc
Confidence 4679999999999999999988877 678888877542 1111111 122221 23333 22333334689999
Q ss_pred EEcCc
Q 005949 85 MHFAA 89 (668)
Q Consensus 85 ih~a~ 89 (668)
|++.|
T Consensus 96 ~d~~G 100 (171)
T d1iz0a2 96 LEVRG 100 (171)
T ss_dssp EECSC
T ss_pred ccccc
Confidence 99877
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.36 E-value=0.026 Score=48.67 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=29.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|.|+||.|+| +|..|.+++..|.+. +++|++.+|.
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~--g~~V~l~~r~ 39 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKK--CREVCVWHMN 39 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTT--EEEEEEECSC
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHc--CCeEEEEEec
Confidence 4567899999 599999999999998 6788887774
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=94.28 E-value=0.054 Score=43.99 Aligned_cols=85 Identities=14% Similarity=0.071 Sum_probs=58.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh------------------------hHHHHHhhhcCCCEEEEccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC------------------------SSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~------------------------~~~~~~l~~~~~d~Vih~a~ 440 (668)
||.|+|+ |.+|++++-.|..+|.-=+++-.|+... ++. +.+++. |+||-+||
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~-~~~~da--DvVVitaG 78 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDA--DMVVITAG 78 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTC--SEEEECCC
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH-HHhhCC--cEEEEecc
Confidence 8999996 9999999999999986212222222110 111 124444 99999999
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
... .......+.+..|+.-...++..+.+++-+
T Consensus 79 ~~~-----~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ 111 (143)
T d1llda1 79 PRQ-----KPGQSRLELVGATVNILKAIMPNLVKVAPN 111 (143)
T ss_dssp CCC-----CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccc-----CCCCchhhhhhhhHHHHHHHHHHHHhhCCC
Confidence 652 122344567789999999999999998763
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.23 E-value=0.067 Score=43.42 Aligned_cols=86 Identities=14% Similarity=0.104 Sum_probs=53.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChh------------HH------------HHHhhhcCCCEEEEcc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS------------SL------------IADVQSVKPTHVFNAA 439 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~------------~~------------~~~l~~~~~d~Vih~a 439 (668)
+||.|+|+ |.+|..++-.|..++. .+++-.|+.... .+ .+.++ +.|+||-+|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l-~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~--~advvvita 77 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKEL-GDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTA--NSDVIVVTS 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGT--TCSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCc-ceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhc--CCCEEEEee
Confidence 58999995 9999999999888875 123323332110 00 01223 349999999
Q ss_pred cccCCCCccccccccccceehhhhhhHHHHHHHHHcCCc
Q 005949 440 GVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
|... ....+..+.+..|+.....++....+++-+
T Consensus 78 g~~~-----~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~ 111 (142)
T d1uxja1 78 GAPR-----KPGMSREDLIKVNADITRACISQAAPLSPN 111 (142)
T ss_dssp SCC--------------CHHHHHHHHHHHHHHHGGGCTT
T ss_pred eccC-----CcCcchhHHHhHHHHHHHHHHHHHhccCCC
Confidence 9552 223445566789999999999999988653
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=94.23 E-value=0.043 Score=46.20 Aligned_cols=94 Identities=9% Similarity=0.062 Sum_probs=56.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC-cccccccccCChhHHHHHhh--------hcCCCEEEEcccccCCCCcccc----
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI-PFEYGKGRLEDCSSLIADVQ--------SVKPTHVFNAAGVTGRPNVDWC---- 450 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~-~v~~~~~D~~d~~~~~~~l~--------~~~~d~Vih~a~~~~~~~~~~~---- 450 (668)
++|+|.| +|..|++++..|.+.|. ++.++.++....+.+.+.+. ..++|+|||+......|.....
T Consensus 18 ~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~~~~DliINaTpiGm~~~~~~~~l~~ 96 (167)
T d1npya1 18 AKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADILVNVTSIGMKGGKEEMDLAF 96 (167)
T ss_dssp SCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTTCTTSTTTTSCSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccccchhhheeccccCCccccccccccc
Confidence 5799998 58899999999999997 57777666544444443332 1257999998764421111100
Q ss_pred ----ccccccceehhhh-hhHHHHHHHHHcCCc
Q 005949 451 ----ESHKTDTIRTNVA-GTLTLADVCRDHGIL 478 (668)
Q Consensus 451 ----~~~~~~~~~~Nv~-~~~~ll~~~~~~~~~ 478 (668)
.......++.++. ---.+++.|++.|++
T Consensus 97 ~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~ 129 (167)
T d1npya1 97 PKAFIDNASVAFDVVAMPVETPFIRYAQARGKQ 129 (167)
T ss_dssp CHHHHHHCSEEEECCCSSSSCHHHHHHHHTTCE
T ss_pred cHhhcCCcceEEEEeeccCCCHHHHHHHHCCCe
Confidence 0112233554443 222477778887765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.17 E-value=0.029 Score=47.99 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=44.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcC--CCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKA--SSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
|+|.|+| +|..|.+++..|.+. +++|++..|.........+..... .........++.-.+.+.+++ .++|+|
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ad~I 75 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL--ENAEVV 75 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH--TTCSEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH--hccchh
Confidence 6899999 599999999999999 567777766422111111110000 001111111122245567777 679999
Q ss_pred EEcC
Q 005949 85 MHFA 88 (668)
Q Consensus 85 ih~a 88 (668)
|-+.
T Consensus 76 i~av 79 (180)
T d1txga2 76 LLGV 79 (180)
T ss_dssp EECS
T ss_pred hccc
Confidence 8754
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.13 E-value=0.047 Score=45.20 Aligned_cols=89 Identities=16% Similarity=0.044 Sum_probs=59.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChh------HH-----------------HHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS------SL-----------------IADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~------~~-----------------~~~l~~~~~d~Vih~a~ 440 (668)
.||.|+|+ |.+|..++-.|..+|.-=+++-.|+.... ++ .+.++++ |+||-+||
T Consensus 20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~a--divvitag 96 (159)
T d2ldxa1 20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANS--KLVIITAG 96 (159)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTE--EEEEECCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccc--cEEEEecc
Confidence 48999995 99999999999999862122222222100 01 1123444 89999998
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCCcEE
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGILMM 480 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~~~v 480 (668)
.. .....+..+.++.|+.....++..+.+++.+-+
T Consensus 97 ~~-----~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~i 131 (159)
T d2ldxa1 97 AR-----MVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCK 131 (159)
T ss_dssp CC-----CCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCE
T ss_pred cc-----cCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeE
Confidence 55 222345566788999999999999988876433
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.09 E-value=0.021 Score=40.66 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
..+|||+||+|.+|...++.+... +.+|++..+++
T Consensus 32 ~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~ 66 (77)
T d1o8ca2 32 DGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE 66 (77)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG
T ss_pred CCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCH
Confidence 568999999999999999977777 67888877753
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.05 E-value=0.013 Score=49.48 Aligned_cols=32 Identities=25% Similarity=0.178 Sum_probs=28.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D 416 (668)
|||+|.|+ |.+|..++..|.+.||+|.++..+
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~ 32 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRV 32 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcC
Confidence 79999996 999999999999999998766544
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=93.94 E-value=0.11 Score=43.74 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=27.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK 40 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r 40 (668)
|+++||.|.| +|.+|+.+++.|.+. ++++++++..
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~ 35 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFS 35 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEE
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEe
Confidence 4567999998 799999999988764 4788886544
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.93 E-value=0.028 Score=48.46 Aligned_cols=105 Identities=10% Similarity=-0.043 Sum_probs=52.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
.+|||+||+|.+|...++.....|. ..|+..+.... ....+.... .. -..+...-.+...........++|+||+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga-~~vi~~~~~~e--~~~~l~~~~-ga-d~vi~~~~~~~~~~~~~~~~~GvDvv~D 106 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC-SRVVGICGTQE--KCLFLTSEL-GF-DAAVNYKTGNVAEQLREACPGGVDVYFD 106 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC-SEEEEEESSHH--HHHHHHHHS-CC-SEEEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC-cceecccchHH--HHhhhhhcc-cc-eEEeeccchhHHHHHHHHhccCceEEEe
Confidence 6799999999999999998777742 24544444321 111111000 11 1223332233332222233468999999
Q ss_pred cCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccccC
Q 005949 87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG 137 (668)
Q Consensus 87 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~vyg 137 (668)
+.|-. .....++.++. -.++|.+.+++-|.
T Consensus 107 ~vGg~------------------~~~~~~~~l~~---~G~iv~~G~~s~~~ 136 (187)
T d1vj1a2 107 NVGGD------------------ISNTVISQMNE---NSHIILCGQISQYN 136 (187)
T ss_dssp SSCHH------------------HHHHHHTTEEE---EEEEEEC-------
T ss_pred cCCch------------------hHHHHhhhccc---cccEEEeccccccc
Confidence 98731 11333444444 35888887665543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=93.89 E-value=0.083 Score=44.49 Aligned_cols=58 Identities=10% Similarity=0.026 Sum_probs=42.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhh--------------hcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQ--------------SVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~--------------~~~~d~Vih~a~~~ 442 (668)
++|+|.| +|-.+++++..|.+.|.++.++.++....+.+.+.+. ..++|+|||+....
T Consensus 19 k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 19 LRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 90 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeecccccC
Confidence 5899999 5777999999999999887777666544444443332 22579999998644
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=93.74 E-value=0.13 Score=42.79 Aligned_cols=54 Identities=20% Similarity=0.169 Sum_probs=38.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh-----------hHHHHHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC-----------SSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~-----------~~~~~~l~~~~~d~Vih~a~ 440 (668)
|||-|.| .|.+|..+++.|++.||+|.....+-... .+..+.++++ |+||-|..
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~--d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQC--DVIITMLP 65 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHC--SEEEECCS
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCC--CeEEEEcC
Confidence 7999998 79999999999999999876554331111 1233455555 88887764
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=93.68 E-value=0.036 Score=47.48 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccC-CccccCCC-cCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPS-KASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
++++|||+|+ |..|++++..|.+.+ ..++++.+|..... ....+... ...........|+.+.+.+.+.+ ..+|
T Consensus 17 ~~k~vlIlGa-GGaarai~~al~~~g-~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d 92 (182)
T d1vi2a1 17 KGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL--ASAD 92 (182)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH--HTCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHhhcC-CceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh--cccc
Confidence 4689999995 889999999999985 44788888864211 11111100 01113445678899988888777 6799
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||++...
T Consensus 93 iiIN~Tp~ 100 (182)
T d1vi2a1 93 ILTNGTKV 100 (182)
T ss_dssp EEEECSST
T ss_pred eeccccCC
Confidence 99999764
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.64 E-value=0.056 Score=44.07 Aligned_cols=56 Identities=16% Similarity=0.271 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
++|+|.|.|+||.||.....-+.+....++|.++.-. .+.+.+.+...+++|.+|
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~-------------------------~N~~~L~~q~~ef~Pk~v 55 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN-------------------------RNVKDLADAAKRTNAKRA 55 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES-------------------------SCHHHHHHHHHHTTCSEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC-------------------------CCHHHHHHHHHhhccccc
Confidence 3689999999999999999988775446788776542 234555566666777777
Q ss_pred E
Q 005949 85 M 85 (668)
Q Consensus 85 i 85 (668)
+
T Consensus 56 ~ 56 (150)
T d1r0ka2 56 V 56 (150)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=93.37 E-value=0.042 Score=46.13 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=29.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||.|+| +|.+|+.+++.|.++ +++|++.||..
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~--g~~V~~~d~~~ 33 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRR--GHYLIGVSRQQ 33 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCc
Confidence 5899997 699999999999998 78999999864
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=93.32 E-value=0.048 Score=38.66 Aligned_cols=35 Identities=9% Similarity=-0.042 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCc
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY 43 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~ 43 (668)
+|+|.|.| +|++|+-++..-.+. ++++++++....
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~L--G~~v~vldp~~~ 35 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPL--GIAVWPVGLDAE 35 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGG--TEEEEEECTTSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHc--CCEEEEEcCCCC
Confidence 47999999 599999999999888 899999987643
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.32 E-value=0.051 Score=46.87 Aligned_cols=36 Identities=14% Similarity=0.362 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|+-++|.|+|| |.+|+.++..++.+ |++|++.|+..
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~ 37 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAAT--GHTVVLVDQTE 37 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhC--CCcEEEEECCh
Confidence 45689999996 99999999999998 79999999864
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.29 E-value=0.051 Score=46.22 Aligned_cols=36 Identities=8% Similarity=0.264 Sum_probs=32.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+|||+|+|| |+.|-.++..|.+.++..+|+++++.+
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999995 999999999999998889999998764
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=93.15 E-value=0.068 Score=44.36 Aligned_cols=56 Identities=16% Similarity=0.216 Sum_probs=42.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-ccccccc--------------cCChhHHHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-FEYGKGR--------------LEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-v~~~~~D--------------~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
.+|+|.|+ |-+|+.+++.|..+|.+ +.+.... ..+.+++.+.+.++ |+||.+.+..
T Consensus 25 ~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~--Divi~atss~ 95 (159)
T d1gpja2 25 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARS--DVVVSATAAP 95 (159)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTC--SEEEECCSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccC--CEEEEecCCC
Confidence 58999996 99999999999999984 5443332 33445667777766 9999998743
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.15 E-value=0.11 Score=43.68 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|++||.|-| .|-||+.+++.|+++ .+.+++.+...
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~-~dieiVaINd~ 35 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQ-DDMELIGITKT 35 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTC-TTEEEEEEEES
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhC-CCceEEEEecC
Confidence 346999998 799999999999875 37888877653
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=93.07 E-value=0.069 Score=45.60 Aligned_cols=98 Identities=12% Similarity=-0.006 Sum_probs=56.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCCCHHH----HHHHhccCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIASADL----VNFLLITES 80 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~----~~~~~~~~~ 80 (668)
+.+|||+|+ |.+|...++.+...|. .+|+++++.+.. ++.. .+ .+. ..+...-.+... +.+.....+
T Consensus 29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga-~~Vi~~~~~~~~--~~~a-~~---lGa~~vi~~~~~~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 29 GKTVVIQGA-GPLGLFGVVIARSLGA-ENVIVIAGSPNR--LKLA-EE---IGADLTLNRRETSVEERRKAIMDITHGRG 100 (182)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTB-SEEEEEESCHHH--HHHH-HH---TTCSEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCEEEEECC-Cccchhheeccccccc-cccccccccccc--cccc-cc---ccceEEEeccccchHHHHHHHHHhhCCCC
Confidence 579999986 9999999998888742 278888885421 1111 11 122 223222223222 222233356
Q ss_pred CCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 81 IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 81 ~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
+|+||.+.|... .....++.++.. .++++++
T Consensus 101 ~Dvvid~vG~~~-----------------~~~~a~~~l~~~---G~iv~~G 131 (182)
T d1vj0a2 101 ADFILEATGDSR-----------------ALLEGSELLRRG---GFYSVAG 131 (182)
T ss_dssp EEEEEECSSCTT-----------------HHHHHHHHEEEE---EEEEECC
T ss_pred ceEEeecCCchh-----------------HHHHHHHHhcCC---CEEEEEe
Confidence 999999987532 114445566653 4777765
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=93.03 E-value=0.19 Score=40.78 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=54.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh------hHHH-----------------HHhhhcCCCEEEEccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC------SSLI-----------------ADVQSVKPTHVFNAAG 440 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~------~~~~-----------------~~l~~~~~d~Vih~a~ 440 (668)
+||.|+| .|.+|..++-.|+.+|.-=+++-.|+... .++. +.+++. |+||-+||
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~a--diVVitaG 78 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADA--DVVISTLG 78 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTC--SEEEECCS
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccc--cEEEEecc
Confidence 5899999 59999999999999885211111222110 0011 123444 99999998
Q ss_pred ccCCCCccccccccccceehhhhhhHHHHHHHHHcCC
Q 005949 441 VTGRPNVDWCESHKTDTIRTNVAGTLTLADVCRDHGI 477 (668)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~Nv~~~~~ll~~~~~~~~ 477 (668)
....+. .....+..+.++.|+.....+++.+.+++-
T Consensus 79 ~~~~~~-~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p 114 (146)
T d1hyha1 79 NIKLQQ-DNPTGDRFAELKFTSSMVQSVGTNLKESGF 114 (146)
T ss_dssp CGGGTC--------CTTHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccc-ccCCccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 551000 001112345567899999999999998865
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.00 E-value=0.068 Score=42.02 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.++|+|+|| |++|-.++..|.++ +.+|+++.+.+
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~--g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTA--GVHVSLVETQP 63 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcc--cceEEEEeecc
Confidence 579999984 99999999999999 78999998864
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=92.95 E-value=0.04 Score=46.77 Aligned_cols=98 Identities=9% Similarity=0.043 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCC---HHHHHHHhccCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIAS---ADLVNFLLITESI 81 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~~~ 81 (668)
.+.+|||.|+ |.+|...++.+...|. .+|+++++.... ++.. .. .+... ..|..+ .+.+.+.....++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga-~~Vi~~d~~~~r--~~~a-~~---lGa~~-~i~~~~~~~~~~v~~~t~g~G~ 97 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGA-GRIIGVGSRPIC--VEAA-KF---YGATD-ILNYKNGHIEDQVMKLTNGKGV 97 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTC-SCEEEECCCHHH--HHHH-HH---HTCSE-EECGGGSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEEcC-Ccchhhhhhhhhcccc-cccccccchhhh--HHHH-Hh---hCccc-cccccchhHHHHHHHHhhccCc
Confidence 3568999975 9999999998887742 368888875421 1111 00 12211 123333 3334444444579
Q ss_pred CEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 82 d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
|+||.++|.... ....++.++.. .++++++
T Consensus 98 D~vid~~g~~~~-----------------~~~a~~~~~~~---G~iv~~G 127 (174)
T d1jqba2 98 DRVIMAGGGSET-----------------LSQAVKMVKPG---GIISNIN 127 (174)
T ss_dssp EEEEECSSCTTH-----------------HHHHHHHEEEE---EEEEECC
T ss_pred ceEEEccCCHHH-----------------HHHHHHHHhcC---CEEEEEe
Confidence 999999985321 13345666653 4777765
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=92.78 E-value=0.21 Score=41.76 Aligned_cols=44 Identities=23% Similarity=0.317 Sum_probs=32.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhh
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQ 428 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~ 428 (668)
|+||+|.| .|.+|..|++.|.+.|+.++++-.|.. ++.++.+.+
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-~~~~~~a~~ 44 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-PESISKAVD 44 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-HHHHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-hHHHHHHHH
Confidence 56799997 699999999999999987776666653 334443333
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.55 E-value=0.11 Score=43.95 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
..+++|.|+| .|-||+.+++.|..- +.+|++.++..
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~--g~~v~~~d~~~ 75 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAAL--GAQVRGFSRTP 75 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred ccCceEEEec-cccccccceeeeecc--ccccccccccc
Confidence 4578999998 699999999999877 78999999854
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.54 E-value=0.059 Score=45.45 Aligned_cols=78 Identities=10% Similarity=0.187 Sum_probs=47.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCCCH-HHHHHHhccCCCCE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIASA-DLVNFLLITESIDT 83 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~-~~~~~~~~~~~~d~ 83 (668)
+.+|+|+|++|.+|...+..+...| ..+|+++++.... ++.. .. .+. ..+..+-.|. +.+.+.....++|+
T Consensus 28 g~~vlV~G~~G~vG~~~~~~~~~~g-~~~V~~~~~~~~~--~~~~-~~---~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~ 100 (170)
T d1jvba2 28 TKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEA--VEAA-KR---AGADYVINASMQDPLAEIRRITESKGVDA 100 (170)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHH--HHHH-HH---HTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CCEEEEEeccccceeeeeecccccc-cccccccccchhh--HHHH-HH---cCCceeeccCCcCHHHHHHHHhhcccchh
Confidence 5699999999999999999888874 3588888875321 1111 00 122 2333332232 22333333356899
Q ss_pred EEEcCcc
Q 005949 84 IMHFAAQ 90 (668)
Q Consensus 84 Vih~a~~ 90 (668)
||.+++.
T Consensus 101 vid~~g~ 107 (170)
T d1jvba2 101 VIDLNNS 107 (170)
T ss_dssp EEESCCC
T ss_pred hhccccc
Confidence 9999874
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.51 E-value=0.086 Score=41.15 Aligned_cols=34 Identities=21% Similarity=0.472 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++|+|+|| |++|-.++..|.+. +.+|+++.+.+
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~ 55 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANF--GTKVTILEGAG 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCeEEEECC-Cccceeeeeeeccc--ccEEEEEEecc
Confidence 579999995 99999999999998 78899998864
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.46 E-value=0.1 Score=43.74 Aligned_cols=25 Identities=24% Similarity=0.254 Sum_probs=22.2
Q ss_pred CCcEEEEEcCCcchhHHHHHHHHHcC
Q 005949 382 PSMKFLIYGRTGWIGGLLGKLCEKEG 407 (668)
Q Consensus 382 ~~mkvli~G~~G~iG~~l~~~l~~~g 407 (668)
|+|||.|-| .|.||+.+++.+.++.
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~ 25 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQD 25 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCC
Confidence 568999999 7999999999998775
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=92.40 E-value=0.1 Score=40.69 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++|+|+|| |++|-.++..|.+. +.+|+++.|.+
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRL--GIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTT--TCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhc--cccceeeehhc
Confidence 679999995 99999999999988 78999998864
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.33 E-value=0.018 Score=48.86 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=28.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|-||.|-| .|.||+.++|.|+++. +++++.+...
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~-dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQP-DMKLVGVAKT 34 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEECS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCC-CCEEEEEECC
Confidence 45899998 8999999999999864 7899988654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.25 E-value=0.079 Score=44.20 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|++|.|+| .|.+|+.+++.|+++ +++|++.||..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~--g~~v~~~d~~~ 34 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQ 34 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHC--CCeEEEEECch
Confidence 46899997 899999999999999 78899998864
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=92.10 E-value=0.059 Score=38.20 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=31.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCS 421 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~ 421 (668)
++|+|+||+|-+|...++.+...|++|....+.-.+.+
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~ 70 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE 70 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence 57999999999999999999999998876655444433
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.05 E-value=0.4 Score=40.02 Aligned_cols=77 Identities=13% Similarity=0.004 Sum_probs=48.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCCCHHHHHHHhc---cCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIASADLVNFLLI---TESI 81 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~---~~~~ 81 (668)
+.+|+|+|+ |.+|...+..+...| ..+|++.++.+.. ++.. .. -+. ..+..+-.+.....+.+. ..++
T Consensus 27 gd~VlI~G~-G~iG~~~~~~a~~~G-~~~Vi~~d~~~~r--l~~a-~~---~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (171)
T d1pl8a2 27 GHKVLVCGA-GPIGMVTLLVAKAMG-AAQVVVTDLSATR--LSKA-KE---IGADLVLQISKESPQEIARKVEGQLGCKP 98 (171)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEESCHHH--HHHH-HH---TTCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECC-CccHHHHHHHHHHcC-CceEEeccCCHHH--HHHH-HH---hCCcccccccccccccccccccccCCCCc
Confidence 568999985 999999999888874 2378888875421 1111 10 122 233444455544444332 2479
Q ss_pred CEEEEcCcc
Q 005949 82 DTIMHFAAQ 90 (668)
Q Consensus 82 d~Vih~a~~ 90 (668)
|+||.+.|.
T Consensus 99 Dvvid~~G~ 107 (171)
T d1pl8a2 99 EVTIECTGA 107 (171)
T ss_dssp SEEEECSCC
T ss_pred eEEEeccCC
Confidence 999999874
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.03 E-value=0.11 Score=40.96 Aligned_cols=35 Identities=26% Similarity=0.553 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+.++|+|+| +|++|..++..|.+. +.+|+++.+.+
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~--g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKA--GKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhcc--ceEEEEEEecC
Confidence 357999998 599999999999999 78899888753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.94 E-value=0.11 Score=40.47 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++|+|+|| |++|-.++..|.+. +.+|+++.+.+
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGL--GAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhcc--ccEEEEEeecc
Confidence 579999985 99999999999998 67999998864
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.83 E-value=0.12 Score=40.70 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++++|+|| |+||-.++..|.+. +.+|+++.+.+
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~l--G~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRL--GSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhh--CcceeEEEecc
Confidence 589999995 99999999999998 78999988854
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=91.78 E-value=0.12 Score=40.15 Aligned_cols=34 Identities=15% Similarity=0.412 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++++|+| +|++|-.++..|.+. +.+|+++.+.+
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~--g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKL--GAQVSVVEARE 54 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhc--ccceEEEeeec
Confidence 58999998 499999999999999 78899998854
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.73 E-value=0.098 Score=45.27 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=31.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||+|+|| |++|-.++..|.+.+.+.+|++++|..
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999995 999999999999998889999998754
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=91.71 E-value=0.25 Score=41.10 Aligned_cols=30 Identities=27% Similarity=0.236 Sum_probs=26.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
|||.|.| .|.+|+.+++.|.+.||+|..+.
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d 30 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVS 30 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEE
Confidence 7999997 69999999999999999886553
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=91.39 E-value=0.14 Score=41.67 Aligned_cols=56 Identities=14% Similarity=0.141 Sum_probs=42.3
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccccccccc-CChhHHHHHhhhcCCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL-EDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~-~d~~~~~~~l~~~~~d~Vih~ 438 (668)
|++|.|.|+||-||.....-+.+...++.++-.-. ++.+.+.+....++|.+|+-.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~ 57 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMD 57 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccc
Confidence 56899999999999999998888765554433222 355677778888889888765
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.39 E-value=0.11 Score=46.89 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
..+||+|+|| |..|-..+..|.++ +++|++++|.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~--G~~V~vier~ 38 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARK--GYSVHILARD 38 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 4579999995 99999999999999 6789999874
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=91.29 E-value=0.067 Score=44.24 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=42.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
++.||.|+| +|.+|+.+...+++..+..+++++ +|.......... ...++.... .+.+.+.+..+..++|+
T Consensus 3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a----~~~~i~~~~---~~~d~l~~~~~~~~iDi 74 (157)
T d1nvmb1 3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARA----QRMGVTTTY---AGVEGLIKLPEFADIDF 74 (157)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHH----HHTTCCEES---SHHHHHHHSGGGGGEEE
T ss_pred CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhh----hhcCCcccc---cceeeeeecccccccCE
Confidence 456999999 899999766556666667788776 443221111000 011233322 12344444333357899
Q ss_pred EEEcC
Q 005949 84 IMHFA 88 (668)
Q Consensus 84 Vih~a 88 (668)
||.+.
T Consensus 75 Vf~AT 79 (157)
T d1nvmb1 75 VFDAT 79 (157)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 98753
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.12 E-value=0.099 Score=43.88 Aligned_cols=76 Identities=14% Similarity=0.086 Sum_probs=45.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.+.+|+|+|+ |.+|...++.+... +.+|+++++... .++... . .+...+.-...+.+...... ..+|+|
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~--G~~vi~~~~~~~--k~~~a~-~---lGa~~~i~~~~~~~~~~~~~--~~~d~v 95 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSR--KREDAM-K---MGADHYIATLEEGDWGEKYF--DTFDLI 95 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSST--THHHHH-H---HTCSEEEEGGGTSCHHHHSC--SCEEEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhc--cccccccccchh--HHHHhh-c---cCCcEEeeccchHHHHHhhh--cccceE
Confidence 3579999986 99999999887777 678999988642 111111 1 12222111111222223322 578999
Q ss_pred EEcCccC
Q 005949 85 MHFAAQT 91 (668)
Q Consensus 85 ih~a~~~ 91 (668)
+.+.+..
T Consensus 96 i~~~~~~ 102 (168)
T d1piwa2 96 VVCASSL 102 (168)
T ss_dssp EECCSCS
T ss_pred EEEecCC
Confidence 9997753
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.06 E-value=0.15 Score=40.28 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++|+|+|| |+||-.++..|.+. +.+|+++.|.+
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~--G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSAL--GSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcC--CcEEEEEeecc
Confidence 579999995 99999999999998 78999998864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.01 E-value=0.16 Score=40.64 Aligned_cols=35 Identities=20% Similarity=0.494 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
..++|+|+| +|++|-.++..|.+. +.+|+++.+.+
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~--g~~Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKA--NMHVTLLDTAA 68 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhh--Ccceeeeeecc
Confidence 357999998 599999999999998 78999998864
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=91.00 E-value=0.35 Score=40.90 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=37.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-ccccccc--------------------------cCChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-FEYGKGR--------------------------LEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-v~~~~~D--------------------------~~d~~~~~~~l~~~~~d~Vi 436 (668)
.+|+|.|+ |..|+.++..|.+.|.+ +.++.++ +.+.+.+.+.+. .+|+||
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~diiI 95 (182)
T d1vi2a1 19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--SADILT 95 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--TCSEEE
T ss_pred CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--ccceec
Confidence 47999995 78899999999999873 3333332 223333444444 459999
Q ss_pred Eccccc
Q 005949 437 NAAGVT 442 (668)
Q Consensus 437 h~a~~~ 442 (668)
|+....
T Consensus 96 N~Tp~G 101 (182)
T d1vi2a1 96 NGTKVG 101 (182)
T ss_dssp ECSSTT
T ss_pred cccCCc
Confidence 998644
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.91 E-value=0.2 Score=38.45 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=42.8
Q ss_pred cEEEEEcCCc----------chhHHHHHHHHHcCCcccccccc---------cC--------ChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTG----------WIGGLLGKLCEKEGIPFEYGKGR---------LE--------DCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G----------~iG~~l~~~l~~~g~~v~~~~~D---------~~--------d~~~~~~~l~~~~~d~Vi 436 (668)
.||+|.|+.. |.+.+.++.|.+.|+++.++..+ +. ..+.+.+.++..+||.|+
T Consensus 5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~E~p~~ii 84 (121)
T d1a9xa4 5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVI 84 (121)
T ss_dssp CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHHhCCCEEE
Confidence 5899999743 57789999999999987544332 22 347788899999999886
Q ss_pred Eccc
Q 005949 437 NAAG 440 (668)
Q Consensus 437 h~a~ 440 (668)
-..|
T Consensus 85 ~~~G 88 (121)
T d1a9xa4 85 VQYG 88 (121)
T ss_dssp CSSS
T ss_pred eehh
Confidence 6554
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.91 E-value=0.14 Score=40.28 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=29.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.++|+|.|| |++|-.++..|.+. +.+|+++.+.+
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEA--GYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCcEEEECC-cHHHHHHHHHhhcc--cceEEEEeccc
Confidence 368999985 99999999999998 78899988753
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.85 E-value=0.11 Score=45.09 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=28.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|||.|+| .||+|..++..|+++ +++|+++|..
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~--g~~V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSAR--GHEVIGVDVS 32 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSC
T ss_pred CEEEEEC-CCHhHHHHHHHHHhC--CCcEEEEeCC
Confidence 6899996 799999999999999 7899999874
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=90.73 E-value=0.17 Score=39.40 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+++++|+|| |+||-.++..|.+. +.+|+++.+..
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~--G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARL--GAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHc--CCceEEEEeec
Confidence 3589999995 99999999999998 78888888754
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.72 E-value=0.38 Score=37.38 Aligned_cols=79 Identities=16% Similarity=0.239 Sum_probs=54.9
Q ss_pred CCCC-CCCeEEEEcCC----------ChhHHHHHHHHHHhCCCCEEEEEcCCCcc-CCccccCCCcCCCCeEEEEccCCC
Q 005949 1 MATY-TPKNILITGAA----------GFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNLIPSKASSNFKFVKGDIAS 68 (668)
Q Consensus 1 m~~~-~~~~vLVtGgt----------G~iG~~l~~~L~~~g~~~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d 68 (668)
|+.- ..+||||+|+. -|-+.+.++.|.+. ++++++++..+.. ....+. ..-+...--.
T Consensus 1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd~d~--------aD~lYfePlt 70 (127)
T d1a9xa3 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDPEM--------ADATYIEPIH 70 (127)
T ss_dssp CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCGGG--------SSEEECSCCC
T ss_pred CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcChhh--------cceeeeecCC
Confidence 4432 35899999983 47899999999999 8999999876432 111111 1233555566
Q ss_pred HHHHHHHhccCCCCEEEEcCc
Q 005949 69 ADLVNFLLITESIDTIMHFAA 89 (668)
Q Consensus 69 ~~~~~~~~~~~~~d~Vih~a~ 89 (668)
.+.+.++++..++|.|+-..|
T Consensus 71 ~e~v~~Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 71 WEVVRKIIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHHHHHHHCCSEEECSSS
T ss_pred HHHHHHHHHHhCcCCeEEEee
Confidence 888999998889999985443
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.65 E-value=0.086 Score=43.40 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=25.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG 413 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~ 413 (668)
|||.|.| .|.+|+.|++.|+++|+++...
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~ 29 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTS 29 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEE
Confidence 7999997 7999999999999999987544
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=90.62 E-value=0.16 Score=41.21 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=42.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCccccccccc-CChhHHHHHhhhcCCCEEEEc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRL-EDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~-~d~~~~~~~l~~~~~d~Vih~ 438 (668)
|++|.|.|+||-||....+-+.+...++.++-.-. .+.+.+.+....++|..|+-.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~ 58 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIA 58 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceec
Confidence 36899999999999999999888654444433222 356777788888899988655
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=90.49 E-value=0.19 Score=41.38 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=43.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
++|+|.|.|.-+|+.|+..|.++|..|......-.+ +.+.+++. |+||.++|..
T Consensus 38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~---l~~~~~~A--DivI~a~G~p 91 (166)
T d1b0aa1 38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN---LRHHVENA--DLLIVAVGKP 91 (166)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC---HHHHHHHC--SEEEECSCCT
T ss_pred ceEEEEeccccccHHHHHHHHHhhccccccccccch---hHHHHhhh--hHhhhhccCc
Confidence 589999999999999999999999988665533333 34566777 9999999966
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.44 E-value=0.6 Score=35.71 Aligned_cols=74 Identities=9% Similarity=0.069 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCC----------hhHHHHHHHHHHhCCCCEEEEEcCCCccCC-ccccCCCcCCCCeEEEEccCCCHHHHH
Q 005949 5 TPKNILITGAAG----------FIASHVCNRLIRNYPEYKIVVLDKLDYCSN-LKNLIPSKASSNFKFVKGDIASADLVN 73 (668)
Q Consensus 5 ~~~~vLVtGgtG----------~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 73 (668)
..++|||+|+.. |-+.+.++.|.+. ++++++++..+..-. ..+ -..-+...--..+.+.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVstd~d--------~aD~lYfeplt~e~v~ 72 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVSTDYD--------TSDRLYFEPVTLEDVL 72 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSSTTSTT--------SSSEEECCCCSHHHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhhcChh--------hcCceEEccCCHHHHH
Confidence 457999999743 7899999999998 799999987543211 111 1223344455678888
Q ss_pred HHhccCCCCEEEEcC
Q 005949 74 FLLITESIDTIMHFA 88 (668)
Q Consensus 74 ~~~~~~~~d~Vih~a 88 (668)
++++..++|.|+-..
T Consensus 73 ~Ii~~E~p~~ii~~~ 87 (121)
T d1a9xa4 73 EIVRIEKPKGVIVQY 87 (121)
T ss_dssp HHHHHHCCSEEECSS
T ss_pred HHHHHhCCCEEEeeh
Confidence 888878899887443
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=90.40 E-value=0.095 Score=37.07 Aligned_cols=37 Identities=22% Similarity=0.189 Sum_probs=30.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCCh
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDC 420 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~ 420 (668)
|++|.|.| +|.+|+-++......|+++.++.-|-.++
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p 37 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA 37 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence 56899998 79999999999999999987776554443
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=90.38 E-value=0.79 Score=33.18 Aligned_cols=44 Identities=14% Similarity=0.034 Sum_probs=28.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSV 430 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~ 430 (668)
|||.++|-.|-==+.|++.|+++|+.|.-. |+.+.+..+ .|+..
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGS--D~~~~~~t~-~L~~~ 45 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGS--NIEETERTA-YLRKL 45 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE--CSSCCHHHH-HHHHT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEE--eCCCChhHH-HHHHC
Confidence 789999854443357999999999977544 554433333 34443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=90.36 E-value=0.13 Score=43.80 Aligned_cols=28 Identities=18% Similarity=0.423 Sum_probs=25.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE 411 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~ 411 (668)
.+|+|+||+|-+|...++.....|.+|.
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi 58 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKGCKVV 58 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeCCCchhHHHHHHHHccCCEEE
Confidence 4799999999999999999999998764
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=90.34 E-value=0.16 Score=42.23 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=29.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||-|+| .|.+|+.+++.|+++ +++|++.||..
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~--G~~V~~~d~~~ 33 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKA--GYSLVVSDRNP 33 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHC--CCeEEEEeCCc
Confidence 5899998 799999999999998 78899999864
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=90.17 E-value=0.22 Score=41.74 Aligned_cols=78 Identities=17% Similarity=0.105 Sum_probs=47.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
+.+|||.|+ |.+|...+..+...| ...|++.++.+. .++.... ....+++..+-.+.+...+.....++|+||
T Consensus 33 g~~vli~Ga-G~vG~~~~~~a~~~g-~~~vv~~~~~~~--k~~~~~~---~ga~~~i~~~~~~~~~~~~~~~~~g~d~vi 105 (172)
T d1h2ba2 33 GAYVAIVGV-GGLGHIAVQLLKVMT-PATVIALDVKEE--KLKLAER---LGADHVVDARRDPVKQVMELTRGRGVNVAM 105 (172)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHC-CCEEEEEESSHH--HHHHHHH---TTCSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEeCC-ChHHHHHHHHHHhhc-CcccccccchhH--HHHHHhh---cccceeecCcccHHHHHHHhhCCCCceEEE
Confidence 568999885 999999999888775 456777777532 1111111 111234443323334444444445799999
Q ss_pred EcCcc
Q 005949 86 HFAAQ 90 (668)
Q Consensus 86 h~a~~ 90 (668)
.++|.
T Consensus 106 d~~g~ 110 (172)
T d1h2ba2 106 DFVGS 110 (172)
T ss_dssp ESSCC
T ss_pred EecCc
Confidence 99985
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.15 E-value=0.11 Score=42.66 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=28.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK 40 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r 40 (668)
+++++|||+|| |.+|..-++.|++. |.+|++++.
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~--GA~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPT--GCKLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGG--TCEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeC
Confidence 46799999996 99999999999999 566776654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=90.00 E-value=0.081 Score=45.38 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=27.7
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccccc
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D 416 (668)
|+||.|.| +|-.|.+++..|.+.||+|.+...|
T Consensus 7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~ 39 (189)
T d1n1ea2 7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN 39 (189)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC
T ss_pred eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec
Confidence 45799999 6888999999999999988765543
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=89.99 E-value=0.59 Score=39.14 Aligned_cols=72 Identities=8% Similarity=0.169 Sum_probs=45.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
.+|-|+| .|.+|+.+++.|+++ +++|++.||... ..+.+......... . . -....+.+.+.+ ..+|.+|-
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~--G~~V~v~dr~~~--~~~~l~~~~~~~~~-~-~-~a~~~~~~~~~~--~~~~~ii~ 72 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDH--GFVVCAFNRTVS--KVDDFLANEAKGTK-V-L-GAHSLEEMVSKL--KKPRRIIL 72 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSTH--HHHHHHHTTTTTSS-C-E-ECSSHHHHHHHB--CSSCEEEE
T ss_pred CcEEEEe-EhHHHHHHHHHHHHC--CCeEEEEcCCHH--HHHHHHHhcccccc-c-c-chhhhhhhhhhh--cccceEEE
Confidence 4789998 799999999999999 678888898642 12221111111010 0 1 123455666666 67888886
Q ss_pred cC
Q 005949 87 FA 88 (668)
Q Consensus 87 ~a 88 (668)
+.
T Consensus 73 ~~ 74 (176)
T d2pgda2 73 LV 74 (176)
T ss_dssp CS
T ss_pred ec
Confidence 64
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=89.83 E-value=0.22 Score=39.19 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++++|+|| |+||-.++..|.+. +.+|+++.+.+
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~--G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTL--GSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcC--CCEEEEEEeec
Confidence 579999995 99999999999999 78999998854
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=89.74 E-value=0.18 Score=42.69 Aligned_cols=30 Identities=23% Similarity=0.214 Sum_probs=26.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
|||.|.| +|-.|.+|+..|.+.|++|.+..
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~ 30 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWG 30 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence 7999999 69999999999999999886543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.71 E-value=0.16 Score=42.71 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=25.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY 412 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~ 412 (668)
.+|+|+||+|-+|...++.+...|.++..
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~ 58 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYGLKILG 58 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeccccccccccccccccCccccc
Confidence 47999999999999999999999987633
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.67 E-value=0.19 Score=47.52 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCc
Q 005949 1 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY 43 (668)
Q Consensus 1 m~~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~ 43 (668)
|+.| |||+|+|| |.-|-..+..|++++.+++|+++.+...
T Consensus 1 m~~~--KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 1 LPTI--RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCSC--CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCC--CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 6644 69999994 9999999999999876789999988753
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=89.66 E-value=0.31 Score=35.92 Aligned_cols=29 Identities=17% Similarity=0.120 Sum_probs=25.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYG 413 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~ 413 (668)
+||+|.|. |-.|..++++|.++|++|...
T Consensus 6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~ 34 (93)
T d2jfga1 6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVM 34 (93)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEEeE-CHHHHHHHHHHHHCCCEEEEe
Confidence 47999985 778999999999999988554
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.66 E-value=0.62 Score=38.52 Aligned_cols=83 Identities=8% Similarity=0.015 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
..+|+|+|+|-+.-+|+.++..|+++ +..|+..+.............. ..........-...+.+.+.. ...|+
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~--gaTVt~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lk~~~--~~aDI 100 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGESLK--LNKHHVEDLGEYSEDLLKKCS--LDSDV 100 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCCSS--CCCCEEEEEEECCHHHHHHHH--HHCSE
T ss_pred CCCCEEEEECCccccHHHHHHHHHHC--CCEEEEecccccccccccccee--eeeeccccccccchhHHhhcc--ccCCE
Confidence 45799999999999999999999998 6788877654211100000000 001111111113355566666 56899
Q ss_pred EEEcCccCC
Q 005949 84 IMHFAAQTH 92 (668)
Q Consensus 84 Vih~a~~~~ 92 (668)
||..+|...
T Consensus 101 vIsavG~p~ 109 (171)
T d1edza1 101 VITGVPSEN 109 (171)
T ss_dssp EEECCCCTT
T ss_pred EEEccCCCc
Confidence 999888654
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=89.58 E-value=0.2 Score=41.93 Aligned_cols=75 Identities=15% Similarity=0.047 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.+.+|||.|+ |.+|...++.+... +.+++++++.... .+.. .. .+... ..|..+.+...... .++|+|
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~~~--~~~a-~~---lGad~-~i~~~~~~~~~~~~--~~~D~v 97 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSEAK--REAA-KA---LGADE-VVNSRNADEMAAHL--KSFDFI 97 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSGGG--HHHH-HH---HTCSE-EEETTCHHHHHTTT--TCEEEE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcc--cccchhhccchhH--HHHH-hc---cCCcE-EEECchhhHHHHhc--CCCcee
Confidence 3579999985 88999999888777 6777888775421 1111 11 12222 24566665544443 679999
Q ss_pred EEcCccC
Q 005949 85 MHFAAQT 91 (668)
Q Consensus 85 ih~a~~~ 91 (668)
|.+.|..
T Consensus 98 id~~g~~ 104 (168)
T d1uufa2 98 LNTVAAP 104 (168)
T ss_dssp EECCSSC
T ss_pred eeeeecc
Confidence 9998753
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=89.55 E-value=0.37 Score=40.42 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=21.8
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG 407 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g 407 (668)
|-||.|-| .|.||+.+++.+.+++
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~ 24 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQP 24 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCC
Confidence 56999998 8999999999999876
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=89.47 E-value=0.18 Score=39.53 Aligned_cols=34 Identities=24% Similarity=0.422 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+++++|+|| |+||-.++..|.+. +.+|+++.|.+
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~--G~~Vtvi~~~~ 58 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRI--GSEVTVVEFAS 58 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhc--CCeEEEEEEcc
Confidence 579999985 99999999999999 78999998864
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=89.44 E-value=1.2 Score=32.79 Aligned_cols=42 Identities=12% Similarity=-0.005 Sum_probs=27.2
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHH
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIAD 426 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~ 426 (668)
++||.+.|-.|-==+.|++.|.++|+.|.-. |.......+.+
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~G~~VsGS--D~~~~~~~~~L 49 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNEGYQISGS--DIADGVVTQRL 49 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEE--ESCCSHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHhCCCEEEEE--eCCCChhhhHH
Confidence 4689998744432277899999999987544 44443333333
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=89.16 E-value=0.34 Score=37.70 Aligned_cols=35 Identities=11% Similarity=0.128 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+++|+|+| +|++|-.++..|.+. +.+|+++.+.+
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~--g~~vt~i~~~~ 55 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNAT--GRRTVMLVRTE 55 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhc--chhheEeeccc
Confidence 358999998 599999999999988 78888888853
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=89.07 E-value=0.39 Score=39.45 Aligned_cols=58 Identities=12% Similarity=0.189 Sum_probs=43.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCE
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDT 83 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 83 (668)
..+|+|+|+|.+..+|+.++..|.++ +.+|+..+.... + +.+.. .+.|+
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~------------------------~---l~~~~--~~ADi 83 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTK------------------------N---LRHHV--ENADL 83 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCS------------------------C---HHHHH--HHCSE
T ss_pred cccceEEEEeccccccHHHHHHHHHh--hccccccccccc------------------------h---hHHHH--hhhhH
Confidence 45799999999999999999999988 678887765320 1 22233 46799
Q ss_pred EEEcCccCC
Q 005949 84 IMHFAAQTH 92 (668)
Q Consensus 84 Vih~a~~~~ 92 (668)
||.++|...
T Consensus 84 vI~a~G~p~ 92 (166)
T d1b0aa1 84 LIVAVGKPG 92 (166)
T ss_dssp EEECSCCTT
T ss_pred hhhhccCcc
Confidence 999998654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=89.07 E-value=0.64 Score=39.38 Aligned_cols=35 Identities=17% Similarity=0.105 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
..++|.|.| .|.||+.+++.|..- +.+|+..++..
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 77 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAESL--GMYVYFYDIEN 77 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred cceEEEEee-cccchhhhhhhcccc--cceEeeccccc
Confidence 467999997 899999999988765 89999998753
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.99 E-value=0.21 Score=39.15 Aligned_cols=32 Identities=22% Similarity=0.397 Sum_probs=26.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDK 40 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r 40 (668)
+++++|+|| |+||-.++..|.+. +.+|+++.+
T Consensus 20 P~~vvIIGg-G~iG~E~A~~l~~l--G~~Vtii~~ 51 (122)
T d1h6va2 20 PGKTLVVGA-SYVALECAGFLAGI--GLDVTVMVR 51 (122)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEES
T ss_pred CCeEEEECC-CccHHHHHHHHhhc--CCeEEEEEe
Confidence 578999995 99999999999999 566666665
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=88.96 E-value=0.17 Score=42.56 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=25.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY 412 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~ 412 (668)
.+|+|+||+|-+|...++.+...|.+|..
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~ 57 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMGLRVLA 57 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEeccccchhhhhhhhccccccccc
Confidence 47999999999999999999999987643
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=88.94 E-value=0.22 Score=41.73 Aligned_cols=58 Identities=16% Similarity=0.051 Sum_probs=40.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhh--------------cCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQS--------------VKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~--------------~~~d~Vih~a~~~ 442 (668)
++|+|.| +|-.++.++..|.+.+-++.++.++....+.+.+.+.. .++|+|||+....
T Consensus 19 k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiIN~tp~g 90 (171)
T d1p77a1 19 QHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAG 90 (171)
T ss_dssp CEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-
T ss_pred CEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccceeeeccccc
Confidence 4799998 56679999999998877777777665444444444431 1569999997654
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=88.92 E-value=0.22 Score=40.73 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=28.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||.|+| .|.+|+.+++.|+++ +++|++.++..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~--g~~v~~~~~~~ 33 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSR--GVEVVTSLEGR 33 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHT--TCEEEECCTTC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHC--CCeEEEEcCch
Confidence 5899997 799999999999998 67888887653
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.75 E-value=0.32 Score=37.81 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=43.4
Q ss_pred cEEEEEcCCc----------chhHHHHHHHHHcCCcccccccc---------cC--------ChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTG----------WIGGLLGKLCEKEGIPFEYGKGR---------LE--------DCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G----------~iG~~l~~~l~~~g~~v~~~~~D---------~~--------d~~~~~~~l~~~~~d~Vi 436 (668)
.||+|.|+.. |.+.+.++.|.+.|+++..+..+ +. ..+.+.+.++..+||.|+
T Consensus 8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E~pd~il 87 (127)
T d1a9xa3 8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVL 87 (127)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHhCcCCeE
Confidence 5899999743 56789999999999987544322 22 347899999999999997
Q ss_pred Eccc
Q 005949 437 NAAG 440 (668)
Q Consensus 437 h~a~ 440 (668)
-..|
T Consensus 88 ~~~G 91 (127)
T d1a9xa3 88 PTMG 91 (127)
T ss_dssp CSSS
T ss_pred EEee
Confidence 5544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=88.49 E-value=0.11 Score=41.23 Aligned_cols=70 Identities=17% Similarity=0.167 Sum_probs=48.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEEE
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIMH 86 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 86 (668)
|.|+|+| .|-+|+.+++.|... + +++++.... ....+ ...++.++.||.++++.+.++- -.+++.||-
T Consensus 1 kHivI~G-~g~~g~~l~~~L~~~--~--i~vi~~d~~--~~~~~----~~~~~~~i~Gd~~~~~~L~~a~-i~~A~~vi~ 68 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELRGS--E--VFVLAEDEN--VRKKV----LRSGANFVHGDPTRVSDLEKAN-VRGARAVIV 68 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSCGG--G--EEEEESCTT--HHHHH----HHTTCEEEESCTTSHHHHHHTT-CTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHcCC--C--CEEEEcchH--HHHHH----HhcCccccccccCCHHHHHHhh-hhcCcEEEE
Confidence 4688888 599999999998533 3 555555322 11111 2347899999999999988763 257888885
Q ss_pred cC
Q 005949 87 FA 88 (668)
Q Consensus 87 ~a 88 (668)
+.
T Consensus 69 ~~ 70 (129)
T d2fy8a1 69 NL 70 (129)
T ss_dssp CC
T ss_pred ec
Confidence 43
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=88.38 E-value=0.44 Score=42.58 Aligned_cols=103 Identities=14% Similarity=0.088 Sum_probs=62.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCc-ccccccc-----------------cCC--hhHHHHHhhhcCCCEEEEcccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIP-FEYGKGR-----------------LED--CSSLIADVQSVKPTHVFNAAGVTG 443 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~-v~~~~~D-----------------~~d--~~~~~~~l~~~~~d~Vih~a~~~~ 443 (668)
.||+|.| .|-+|++++..|...|.. +.++..| +-. .+...+.++...|++-|..-....
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~ 109 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 109 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence 3899999 678999999999999973 3333322 221 234556677777887666544220
Q ss_pred CCCcccc---cccccccee--hhhhhhHHHHHHHHHcCCcEEEEecceeEe
Q 005949 444 RPNVDWC---ESHKTDTIR--TNVAGTLTLADVCRDHGILMMNYATGCIFE 489 (668)
Q Consensus 444 ~~~~~~~---~~~~~~~~~--~Nv~~~~~ll~~~~~~~~~~v~~sS~~vy~ 489 (668)
..... .......++ .|...-..+-++|.++++++++-+....+|
T Consensus 110 --~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip~i~g~~~~~~g 158 (247)
T d1jw9b_ 110 --DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEG 158 (247)
T ss_dssp --CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred --hhccccccccccceeeeccchhhhhhhHHHHHHHhCCCccccccccccc
Confidence 00000 011111122 455666778889999999988765554443
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=88.32 E-value=0.35 Score=40.57 Aligned_cols=77 Identities=12% Similarity=-0.027 Sum_probs=46.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEE-E-EccCCC-HHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKF-V-KGDIAS-ADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~-~~Dl~d-~~~~~~~~~~~~~d 82 (668)
+.+|||.|+ |.+|...+..+...+ ..+|+++++...... . ... .+... + ..+..+ .+.........++|
T Consensus 29 GdtVlV~Ga-GG~G~~~~~~~~~~g-~~~Vi~~~~~~~k~~--~-a~~---~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D 100 (176)
T d2jhfa2 29 GSTCAVFGL-GGVGLSVIMGCKAAG-AARIIGVDINKDKFA--K-AKE---VGATECVNPQDYKKPIQEVLTEMSNGGVD 100 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGGHH--H-HHH---TTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCEEEEECC-CCcHHHHHHHHHHcC-CceEEeecCcHHHHH--H-HHH---hCCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence 569999998 668999999888874 568888888643211 1 111 12222 2 122222 23333444446899
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.|.
T Consensus 101 ~vid~~G~ 108 (176)
T d2jhfa2 101 FSFEVIGR 108 (176)
T ss_dssp EEEECSCC
T ss_pred EEEecCCc
Confidence 99999885
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.30 E-value=0.16 Score=43.16 Aligned_cols=29 Identities=21% Similarity=0.161 Sum_probs=25.7
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEY 412 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~ 412 (668)
.+|||+||+|-+|...++.+...|.++..
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~ 55 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYT 55 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEEECCCCCcccccchhhcccccccee
Confidence 47999999999999999999999987643
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=88.26 E-value=0.28 Score=40.08 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=29.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|+|.++| +|-+|+++++.|++.+ .+++++.+|..
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~-~~~i~v~~r~~ 34 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQG-GYRIYIANRGA 34 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHC-SCEEEEECSSH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCC-CCcEEEEeCCh
Confidence 5899998 5999999999999986 48999998864
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=88.26 E-value=1.6 Score=38.59 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=27.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
..+|+|.| .|.+|++++..|...| --+++++|..
T Consensus 30 ~~~VliiG-~GglGs~va~~La~~G-vg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVG-LGGLGCAASQYLASAG-VGNLTLLDFD 63 (247)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHHT-CSEEEEECCC
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcC-CCeEEEECCc
Confidence 46999999 6889999999999996 3377777753
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=88.19 E-value=0.25 Score=35.83 Aligned_cols=52 Identities=15% Similarity=0.126 Sum_probs=35.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc--------cCChhHHHHHhhhcCCCEEE
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR--------LEDCSSLIADVQSVKPTHVF 436 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D--------~~d~~~~~~~l~~~~~d~Vi 436 (668)
|||||.| +|-=-.+|+..|.+..+++.+.+++ ..+.+.+..+....++|.||
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~G~~~~~~~~~~~~~~~~~~~~~idlvi 60 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNAGTKRDGTNHPYEGEKTLKAIPEEDIVI 60 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCTTGGGTSEECCCCTHHHHHTSCSSCEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCccccccceeccchhhHHHHHhccceeEE
Confidence 7999999 5666889999999888877655543 12334444555555677653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.12 E-value=0.9 Score=37.42 Aligned_cols=36 Identities=8% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
..+|+|+|+|-+.-+|+.++..|+++ +.+|+..+..
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~ 72 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSK 72 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT
T ss_pred cccceEEEEecCCccchHHHHHHHhc--cCceEEEecc
Confidence 35799999999999999999999998 7888887764
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=88.01 E-value=0.24 Score=40.52 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=26.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKG 415 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~ 415 (668)
|||.|.| +|-+|++|++.|.+.|+++.+...
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r 31 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGS 31 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcC
Confidence 7999997 899999999999999998765543
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.99 E-value=0.4 Score=39.63 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=44.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
++|+|.|.|.-+|+.|+..|+++|..|.....+-.+ +.+.+.+. |+||.++|..
T Consensus 40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~---l~~~~~~a--Divi~a~G~~ 93 (170)
T d1a4ia1 40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---LDEEVNKG--DILVVATGQP 93 (170)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---HHHHHTTC--SEEEECCCCT
T ss_pred ceEEEEecCCccchHHHHHHHhccCceEEEeccccc---HHHHHhhc--cchhhccccc
Confidence 579999999999999999999999888776554434 34466666 9999999966
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=87.62 E-value=0.21 Score=42.21 Aligned_cols=33 Identities=12% Similarity=0.402 Sum_probs=29.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||-|+| .|.+|..++++|+++ +++|++.||..
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~--G~~V~~~dr~~ 34 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEK--GFKVAVFNRTY 34 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 5799997 899999999999999 68888888854
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=87.52 E-value=0.32 Score=40.54 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=28.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|++|.|-| .|-||+.++|.|++++ +.+++.+...
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~-di~vvaInd~ 34 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQD-DMKVIGVSKT 34 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSS-SEEEEEEEES
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCC-CceEEEEecC
Confidence 56899997 8999999999888764 6888877654
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=87.44 E-value=0.26 Score=41.06 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
+.+|||+||+|.+|...++..... +.+|+...++.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~ 58 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNR 58 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSS
T ss_pred CCEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCH
Confidence 347999999999999999988888 67888887754
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=87.41 E-value=0.18 Score=42.93 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
-++|.|+|+ |.+|+.++..++.+ |++|++.|+..
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~ 37 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASK--GTPILMKDINE 37 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 468999996 99999999999998 78899998864
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=87.06 E-value=0.18 Score=43.27 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+++|.|+| .|.||+.+++.|..- +.+|++.|+..
T Consensus 42 ~gk~vgIiG-~G~IG~~va~~l~~f--g~~V~~~d~~~ 76 (197)
T d1j4aa1 42 RDQVVGVVG-TGHIGQVFMQIMEGF--GAKVITYDIFR 76 (197)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred cCCeEEEec-ccccchhHHHhHhhh--cccccccCccc
Confidence 468999998 899999999999765 88999998753
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=86.88 E-value=0.53 Score=39.35 Aligned_cols=75 Identities=11% Similarity=0.091 Sum_probs=43.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCCCHHHHHHH--hccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIASADLVNFL--LITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~--~~~~~~d 82 (668)
+.+|||.|+ |.+|...+..+...| ...|++.++.+.. ++.. .. .+. +++ |..+.+..+++ +...++|
T Consensus 29 g~~VlI~G~-G~iG~~~~~~ak~~g-~~~v~~~~~~~~k--~~~a-~~---~Ga~~~i--~~~~~~~~~~i~~~t~gg~D 98 (174)
T d1f8fa2 29 ASSFVTWGA-GAVGLSALLAAKVCG-ASIIIAVDIVESR--LELA-KQ---LGATHVI--NSKTQDPVAAIKEITDGGVN 98 (174)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHHHT-CSEEEEEESCHHH--HHHH-HH---HTCSEEE--ETTTSCHHHHHHHHTTSCEE
T ss_pred CCEEEEeCC-CHHHhhhhhcccccc-cceeeeeccHHHH--HHHH-HH---cCCeEEE--eCCCcCHHHHHHHHcCCCCc
Confidence 569999986 999999999888875 3356666664321 1111 11 122 333 33343333322 2234799
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.|.
T Consensus 99 ~vid~~G~ 106 (174)
T d1f8fa2 99 FALESTGS 106 (174)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCc
Confidence 99999875
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=86.87 E-value=0.42 Score=40.03 Aligned_cols=77 Identities=10% Similarity=-0.023 Sum_probs=44.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeE-EEEc-c-CCCHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK-FVKG-D-IASADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~-D-l~d~~~~~~~~~~~~~d 82 (668)
+.+|||.|+ |.+|...+..+...| ...|++.++.+.. . ++... -+.. .+.. + -.+...........++|
T Consensus 29 G~tVlI~Ga-GGvG~~aiq~ak~~G-~~~vi~~~~~~~k--~-~~ak~---lGa~~~i~~~~~~~~~~~~~~~~~~~g~D 100 (176)
T d2fzwa2 29 GSVCAVFGL-GGVGLAVIMGCKVAG-ASRIIGVDINKDK--F-ARAKE---FGATECINPQDFSKPIQEVLIEMTDGGVD 100 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSCGGG--H-HHHHH---HTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCEEEEecc-hhHHHHHHHHHHHHh-cCceEEEcccHHH--H-HHHHH---hCCcEEEeCCchhhHHHHHHHHHcCCCCc
Confidence 579999987 678999999888884 3567777664321 1 11111 1222 2221 1 12222333333346899
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.|.
T Consensus 101 ~vid~~G~ 108 (176)
T d2fzwa2 101 YSFECIGN 108 (176)
T ss_dssp EEEECSCC
T ss_pred EeeecCCC
Confidence 99999874
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=86.78 E-value=0.32 Score=41.14 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|+.+|+|+| +|++|-.++..|.+.|..++++.+.+.
T Consensus 2 m~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~~~ 37 (183)
T d1d7ya1 2 LKAPVVVLG-AGLASVSFVAELRQAGYQGLITVVGDE 37 (183)
T ss_dssp CCSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEESS
T ss_pred CCCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEecc
Confidence 345799999 599999999999999888888877654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=86.69 E-value=0.27 Score=41.61 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=27.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D 416 (668)
+||.|.|+ |-+|..++..|.++||+|.++..+
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~ 33 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDID 33 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECC
Confidence 58999995 999999999999999988766543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=86.63 E-value=0.49 Score=39.56 Aligned_cols=77 Identities=10% Similarity=-0.030 Sum_probs=46.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEccCC--CHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGDIA--SADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dl~--d~~~~~~~~~~~~~d 82 (668)
+.+|+|+| +|.||...+..+...| -..|++.++.+... .+... -+. ..+...-. ..+.........++|
T Consensus 29 G~~VlV~G-~G~iGl~a~~~ak~~G-a~~Vi~~d~~~~r~---~~a~~---~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d 100 (174)
T d1e3ia2 29 GSTCAVFG-LGCVGLSAIIGCKIAG-ASRIIAIDINGEKF---PKAKA---LGATDCLNPRELDKPVQDVITELTAGGVD 100 (174)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTT-CSEEEEECSCGGGH---HHHHH---TTCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCEEEEEC-CChHHHHHHHHHHHhC-CceeeeeccchHHH---HHHHH---hCCCcccCCccchhhhhhhHhhhhcCCCc
Confidence 57999997 5999999999888884 34677777754211 11111 122 22222111 223333334446899
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.|.
T Consensus 101 ~vie~~G~ 108 (174)
T d1e3ia2 101 YSLDCAGT 108 (174)
T ss_dssp EEEESSCC
T ss_pred EEEEeccc
Confidence 99999985
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=86.40 E-value=2.9 Score=32.97 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=30.7
Q ss_pred CCeEEEEcCC---ChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAA---GFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgt---G~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.++|.|+|++ +-.|..+++.|.+. +++|+.+.+..
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~~ 56 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKY 56 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTC
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCcc
Confidence 5799999998 88999999999998 67899988753
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.04 E-value=0.27 Score=42.03 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=27.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D 416 (668)
.||.|.|+ |.+|+.++..++..|++|.++..|
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~ 36 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQT 36 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECC
Confidence 48999995 999999999999999998766544
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=85.68 E-value=1.1 Score=37.24 Aligned_cols=77 Identities=8% Similarity=-0.080 Sum_probs=46.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeE-EEEccCCC--HHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK-FVKGDIAS--ADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d--~~~~~~~~~~~~~d 82 (668)
+.+|||.|+ |.+|...+..+...| ..+|+++++.... ++. .. ..+.. ++...-.| .+.........+.|
T Consensus 28 G~~VlV~Ga-GgvGl~a~~~ak~~G-~~~Vi~~d~~~~k--l~~-a~---~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d 99 (174)
T d1p0fa2 28 GSTCAVFGL-GGVGFSAIVGCKAAG-ASRIIGVGTHKDK--FPK-AI---ELGATECLNPKDYDKPIYEVICEKTNGGVD 99 (174)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSCGGG--HHH-HH---HTTCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCEEEEECC-CchhHHHHHHHHHcC-CceeeccCChHHH--HHH-HH---HcCCcEEEcCCCchhHHHHHHHHhcCCCCc
Confidence 579999985 999999999998885 3578888875421 111 11 11222 22211122 23333334445899
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.+.
T Consensus 100 ~vid~~g~ 107 (174)
T d1p0fa2 100 YAVECAGR 107 (174)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCC
Confidence 99999875
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=85.66 E-value=0.39 Score=44.74 Aligned_cols=35 Identities=31% Similarity=0.557 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
++|||+|+| +|.-|...+..|.++ +++|+++.+..
T Consensus 1 k~KKI~IIG-aG~sGL~aA~~L~k~--G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVG-AGFSGAVIGRQLAEK--GHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 368999999 599999999999988 78999998864
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=85.44 E-value=0.17 Score=42.55 Aligned_cols=30 Identities=30% Similarity=0.428 Sum_probs=26.6
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
+|||.||+|-+|...++.+...|.+|....
T Consensus 34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~ 63 (176)
T d1xa0a2 34 PVLVTGATGGVGSLAVSMLAKRGYTVEAST 63 (176)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeccchHHHHHHHHHHHcCCceEEec
Confidence 699999999999999999999999874443
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=85.43 E-value=0.58 Score=39.29 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
.+++|+|+| +|++|-.++..|.+.+..++|+.+.+.
T Consensus 2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence 357999998 599999999999999877888777664
|
| >d1iu8a_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphorylase/hydrolase-like superfamily: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) family: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) domain: Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=85.41 E-value=0.37 Score=41.53 Aligned_cols=59 Identities=15% Similarity=0.055 Sum_probs=41.3
Q ss_pred cEEEEEcCCcchh------HHHHHHHHHcCCcccccccccC--C-hhHHHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIG------GLLGKLCEKEGIPFEYGKGRLE--D-CSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG------~~l~~~l~~~g~~v~~~~~D~~--d-~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
|||||||=.-|-| ..+++.|.+.+.++......+. + .+.+.+++++.+||+|||++-..
T Consensus 1 mkILvTGF~pF~~~~~NpS~~i~~~L~~~~~~i~~~~LpV~~~~~~~~~~~~~~~~~pd~vih~G~~~ 68 (206)
T d1iu8a_ 1 MKILLTGFEPFGGDDKNPTMDIVEALSERIPEVVGEILPVSFKRAREKLLKVLDDVRPDITINLGLAP 68 (206)
T ss_dssp CCEEEEEECCCTTCSCCHHHHHHHHHHHHCTTEEEEEECSCHHHHHHHHHHHHHHHCCSEEEEEEECT
T ss_pred CEEEEEeeCCCCCCCCChHHHHHHHhhcccCeEEEEEeeccHHHHHHHHHHHHHhcCCcEEEEEEecC
Confidence 7899999777755 6788888888776644333332 2 23456677788999999998644
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.31 E-value=0.36 Score=39.42 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=28.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
|||.++| +|-+|+++++.|++. ++++++.+|..
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~--~~~i~v~~r~~ 33 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQT--PHELIISGSSL 33 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTS--SCEEEEECSSH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhC--CCeEEEEcChH
Confidence 5899997 799999999999988 67888888753
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=85.26 E-value=4.8 Score=30.48 Aligned_cols=33 Identities=12% Similarity=0.339 Sum_probs=28.8
Q ss_pred CeEEEEcCC---ChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 7 KNILITGAA---GFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 7 ~~vLVtGgt---G~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|+|.|+|++ +-.|..+++.|++. +++|+.+.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccc
Confidence 689999988 78999999999998 6789988765
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.18 E-value=0.36 Score=41.18 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=28.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
++||+|+|| |..|-..+..|.++|+. .|+++.+..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~-~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYS-DITIFEKQE 38 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCC-eEEEEEecC
Confidence 589999995 99999999999999432 477888754
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=85.17 E-value=0.84 Score=37.84 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=21.6
Q ss_pred CcEEEEEcCCcchhHHHHHHHHHcC
Q 005949 383 SMKFLIYGRTGWIGGLLGKLCEKEG 407 (668)
Q Consensus 383 ~mkvli~G~~G~iG~~l~~~l~~~g 407 (668)
|.||.|-| .|.||+.+.+.+.+++
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~ 24 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQD 24 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSS
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCC
Confidence 67899997 8999999999998887
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=84.99 E-value=0.63 Score=38.96 Aligned_cols=77 Identities=9% Similarity=0.007 Sum_probs=47.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeE-EEE-ccCCC-HHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK-FVK-GDIAS-ADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~-~Dl~d-~~~~~~~~~~~~~d 82 (668)
+.+|+|+|+ |.+|...+..+...| ..+|+++|..+.. ++ +... .+.. ++. -|-.+ .+.+.+.....++|
T Consensus 30 g~tVlI~G~-GgvGl~ai~~ak~~G-~~~Vi~vd~~~~k--l~-~Ak~---~GA~~~in~~~~~~~~~~~~~~~~g~G~d 101 (176)
T d1d1ta2 30 GSTCVVFGL-GGVGLSVIMGCKSAG-ASRIIGIDLNKDK--FE-KAMA---VGATECISPKDSTKPISEVLSEMTGNNVG 101 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGG--HH-HHHH---HTCSEEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred CCEEEEECC-CchhHHHHHHHHHcC-CceEEEecCcHHH--HH-HHHh---cCCcEEECccccchHHHHHHHHhccccce
Confidence 568999985 999999999998874 3689999986431 11 1111 1222 221 22222 33344444456899
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.+.
T Consensus 102 ~vi~~~g~ 109 (176)
T d1d1ta2 102 YTFEVIGH 109 (176)
T ss_dssp EEEECSCC
T ss_pred EEEEeCCc
Confidence 99999875
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=84.76 E-value=0.55 Score=39.37 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
++|+|+|+| +|..|-..+..|.++ +++|+++.+..
T Consensus 42 ~~k~V~IIG-aGPAGL~AA~~la~~--G~~Vtl~E~~~ 76 (179)
T d1ps9a3 42 QKKNLAVVG-AGPAGLAFAINAAAR--GHQVTLFDAHS 76 (179)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCcEEEEEC-ccHHHHHHHHHHHhh--ccceEEEeccC
Confidence 468999999 599999999999999 68999998854
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.75 E-value=0.84 Score=38.16 Aligned_cols=57 Identities=16% Similarity=0.221 Sum_probs=39.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhh-----------------h--cCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQ-----------------S--VKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~-----------------~--~~~d~Vih~a~~~ 442 (668)
++|+|.| +|..++.++..|.+.| ++.++.++....+.+.+.+. . .++|.|||+....
T Consensus 19 k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~g 94 (177)
T d1nvta1 19 KNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIG 94 (177)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTT
T ss_pred CEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCccc
Confidence 5799998 5778999999998777 77777666544333332221 0 1568999998755
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=84.57 E-value=0.57 Score=40.11 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+++|.|+| .|-||+.+++.|..- +.+|++.|+..
T Consensus 44 ~~ktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 78 (199)
T d1dxya1 44 GQQTVGVMG-TGHIGQVAIKLFKGF--GAKVIAYDPYP 78 (199)
T ss_dssp GGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred cceeeeeee-ccccccccccccccc--ceeeeccCCcc
Confidence 358999998 799999999999766 89999999853
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=84.50 E-value=2 Score=38.68 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
.++++|+|-| .|-+|+++++.|.+. +.+|+.++..
T Consensus 34 L~gktvaIqG-fGnVG~~~A~~L~e~--Gakvv~vsD~ 68 (293)
T d1hwxa1 34 FGDKTFAVQG-FGNVGLHSMRYLHRF--GAKCVAVGES 68 (293)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEEET
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEcc
Confidence 4578999998 799999999999998 7888877653
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=84.49 E-value=0.37 Score=43.78 Aligned_cols=31 Identities=16% Similarity=0.362 Sum_probs=27.8
Q ss_pred eEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 8 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 8 ~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
.|+|+|| |..|..++.+|.++ +.+|+++++.
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~--G~~V~vlE~~ 36 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKE--NKNTALFESG 36 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHC--CCcEEEEeCC
Confidence 4999995 99999999999999 6889999874
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=84.41 E-value=0.24 Score=42.25 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+++|.|+| .|.||+.+++.|..- +.+|+..++..
T Consensus 46 ~g~tvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 80 (191)
T d1gdha1 46 DNKTLGIYG-FGSIGQALAKRAQGF--DMDIDYFDTHR 80 (191)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECSSC
T ss_pred cccceEEee-cccchHHHHHHHHhh--ccccccccccc
Confidence 468999998 799999999988766 88999988753
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=84.26 E-value=1.7 Score=32.94 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=28.8
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE 418 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~ 418 (668)
.+|+|.| .|-+|..-++.|++.|.++.++..+..
T Consensus 13 k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 13 RDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 4899999 689999999999999998877755444
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=84.08 E-value=0.38 Score=40.46 Aligned_cols=28 Identities=18% Similarity=0.253 Sum_probs=25.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE 411 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~ 411 (668)
.+|+|+||+|-+|..+++.+...|.+|.
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi 57 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKLI 57 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEEccccccchHHHHHHHHhCCeEe
Confidence 3799999999999999999999998763
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=83.97 E-value=0.64 Score=38.66 Aligned_cols=118 Identities=11% Similarity=0.033 Sum_probs=61.1
Q ss_pred CCeEEEEcCCChhHHH--HHHHHHHh--CCCCEEEEEcCCCccCCccc--cCC--CcCCCCeEEEEccCCCHHHHHHHhc
Q 005949 6 PKNILITGAAGFIASH--VCNRLIRN--YPEYKIVVLDKLDYCSNLKN--LIP--SKASSNFKFVKGDIASADLVNFLLI 77 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~--l~~~L~~~--g~~~~v~~~~r~~~~~~~~~--~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~ 77 (668)
+|||.|+|| |.+|.. ++..|+.. ....+++++|.......... +.. .......++... +| ..+++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL- 74 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI- 74 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH-
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc-
Confidence 469999996 988865 34445532 22459999998642111000 000 001112222221 12 34455
Q ss_pred cCCCCEEEEcCccCCcccccCChH------------------------HHHHHHHHHHHHHHHHHHHcCCCcEEEEEc
Q 005949 78 TESIDTIMHFAAQTHVDNSFGNSF------------------------EFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
Q Consensus 78 ~~~~d~Vih~a~~~~~~~~~~~~~------------------------~~~~~nv~~~~~l~~~~~~~~~~~~~v~~S 131 (668)
.++|+|+..++.........+.. ....-|+.-.+.+++.+++..+-..++.+|
T Consensus 75 -~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T 151 (171)
T d1obba1 75 -IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA 151 (171)
T ss_dssp -TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred -cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence 78999999987643211000000 011247777788888888876434445444
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=83.70 E-value=0.64 Score=39.42 Aligned_cols=107 Identities=4% Similarity=-0.082 Sum_probs=0.0
Q ss_pred CCCeEEEE-cCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhc-----c
Q 005949 5 TPKNILIT-GAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLI-----T 78 (668)
Q Consensus 5 ~~~~vLVt-GgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~ 78 (668)
.+.+|+|. ||+|.+|...++..... +.+|+++.+....................+..-+....+....+-+ .
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g 105 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 105 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhcc
Q ss_pred CCCCEEEEcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCcc
Q 005949 79 ESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE 134 (668)
Q Consensus 79 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~ 134 (668)
.++|+||++.|. ..+-+.++...+-.++|.+++.+
T Consensus 106 ~~vdvv~D~vg~---------------------~~~~~~~~~l~~~G~~v~~G~~~ 140 (189)
T d1gu7a2 106 GEAKLALNCVGG---------------------KSSTGIARKLNNNGLMLTYGGMS 140 (189)
T ss_dssp CCEEEEEESSCH---------------------HHHHHHHHTSCTTCEEEECCCCS
T ss_pred CCceEEEECCCc---------------------chhhhhhhhhcCCcEEEEECCcc
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=83.65 E-value=0.49 Score=35.80 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
+.+|+|+|+| +|.-|.-++..|... ..+++.+.++
T Consensus 30 f~gK~VlVVG-~g~Sa~dia~~l~~~--ak~v~~~~~r 64 (107)
T d2gv8a2 30 FVGESVLVVG-GASSANDLVRHLTPV--AKHPIYQSLL 64 (107)
T ss_dssp GTTCCEEEEC-SSHHHHHHHHHHTTT--SCSSEEEECT
T ss_pred cCCCeEEEEC-CCCCHHHHHHHHHHh--cCEEEEEEec
Confidence 4679999999 599999999999876 3444444443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=83.63 E-value=0.89 Score=36.87 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=36.6
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCccc----------------------ccccccCChhHHHHHhhhcCCCEEEEccc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFE----------------------YGKGRLEDCSSLIADVQSVKPTHVFNAAG 440 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~----------------------~~~~D~~d~~~~~~~l~~~~~d~Vih~a~ 440 (668)
+|+|.|. |-+|..+++.|.+.|+++. ++.+|.+|++.++++--+ +.++||-+..
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~-~a~~vi~~~~ 80 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID-RCRAILALSD 80 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT-TCSEEEECSS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccc-cCCEEEEccc
Confidence 5899985 8999999999999998653 345666666555433222 3466665543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=83.58 E-value=0.39 Score=37.27 Aligned_cols=30 Identities=27% Similarity=0.298 Sum_probs=27.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
.+++|.| +|+||..++..|.+.|.+|.++.
T Consensus 23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~ 52 (119)
T d3lada2 23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLE 52 (119)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC-CChHHHHHHHHHHHcCCceEEEE
Confidence 5899998 79999999999999999987765
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=83.52 E-value=0.23 Score=42.46 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
..+++|.|+| .|-||+.+++.|..- +.+|+..++..
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~ 82 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAF--GFNVLFYDPYL 82 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECTTS
T ss_pred eeCceEEEec-cccccccceeeeecc--ccceeeccCcc
Confidence 3578999998 799999999999765 89999998864
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=83.42 E-value=0.44 Score=39.96 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+|||+||+|.+|...++..... +.+|+++.++.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~ 66 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE 66 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecch
Confidence 48999999999999999988777 78888887754
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.35 E-value=1.3 Score=42.81 Aligned_cols=24 Identities=33% Similarity=0.362 Sum_probs=21.6
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCC
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGI 408 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~ 408 (668)
+||||.|+ |-||..+++.|...|.
T Consensus 38 ~kVlvvG~-GglG~ei~k~L~~~Gv 61 (426)
T d1yovb1 38 CKVLVIGA-GGLGCELLKNLALSGF 61 (426)
T ss_dssp CCEEEECS-STTHHHHHHHHHTTTC
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCC
Confidence 48999996 6699999999999997
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=83.34 E-value=1.5 Score=34.18 Aligned_cols=97 Identities=10% Similarity=0.061 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEEE
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTIM 85 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 85 (668)
..+|+|.| +|.+|+.|++.+... .+++++++-.......-.. -.++.+.. .+.+.+... ..++.++
T Consensus 3 ~~~v~I~G-aG~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~G~~------I~Gi~V~~-----~~~l~~~~~-~~i~iai 68 (126)
T d2dt5a2 3 KWGLCIVG-MGRLGSALADYPGFG-ESFELRGFFDVDPEKVGRP------VRGGVIEH-----VDLLPQRVP-GRIEIAL 68 (126)
T ss_dssp CEEEEEEC-CSHHHHHHHHCSCCC-SSEEEEEEEESCTTTTTCE------ETTEEEEE-----GGGHHHHST-TTCCEEE
T ss_pred CceEEEEc-CCHHHHHHHHhHhhc-CCcEEEEEEeCchHhcCCE------ECCEEEec-----HHHHHHHHh-hcccEEE
Confidence 34899999 599999999987543 3788876533221111111 12455543 334555553 4566655
Q ss_pred EcCccCCcccccCChHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEcCccc
Q 005949 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV 135 (668)
Q Consensus 86 h~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~v~~SS~~v 135 (668)
-+... ...+.+.+.|.+++ ++.+.-++....
T Consensus 69 ~~i~~------------------~~~~~I~d~l~~~g-Ik~I~~f~~~~l 99 (126)
T d2dt5a2 69 LTVPR------------------EAAQKAADLLVAAG-IKGILNFAPVVL 99 (126)
T ss_dssp ECSCH------------------HHHHHHHHHHHHHT-CCEEEECSSSCC
T ss_pred EeCCH------------------HHHHHHHHHHHHcC-CCEEeecCceee
Confidence 44321 12256778888877 888877765443
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.33 E-value=0.42 Score=37.24 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=27.0
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
.+++|.| +|+||..++..|.+.|.+|+++.
T Consensus 24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~ 53 (122)
T d1v59a2 24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVE 53 (122)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEEC-CCchHHHHHHHHHhhCcceeEEE
Confidence 4899998 79999999999999999997765
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=83.05 E-value=1 Score=35.82 Aligned_cols=78 Identities=12% Similarity=-0.003 Sum_probs=52.0
Q ss_pred cEEEEEcCC---cchhHHHHHHHHHcCCcccccccc---cCC---hhHHHHHhhhcCCCEEEEcccccCCCCcccccccc
Q 005949 384 MKFLIYGRT---GWIGGLLGKLCEKEGIPFEYGKGR---LED---CSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHK 454 (668)
Q Consensus 384 mkvli~G~~---G~iG~~l~~~l~~~g~~v~~~~~D---~~d---~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~ 454 (668)
.+|.|.|+| +-.|..+.+.|.+.||+|..+.-. +.. ..++.++- ..+|.|+-+..
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp--~~iD~v~i~vp-------------- 83 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIP--DKIEVVDLFVK-------------- 83 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCS--SCCSEEEECSC--------------
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccC--ccceEEEEEeC--------------
Confidence 479999998 789999999999999987544322 111 11222111 14677666543
Q ss_pred ccceehhhhhhHHHHHHHHHcCCcEEEEec
Q 005949 455 TDTIRTNVAGTLTLADVCRDHGILMMNYAT 484 (668)
Q Consensus 455 ~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS 484 (668)
...+..+++.|.+.|++.+.+.+
T Consensus 84 -------~~~~~~~~~e~~~~g~k~v~~~~ 106 (139)
T d2d59a1 84 -------PKLTMEYVEQAIKKGAKVVWFQY 106 (139)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred -------HHHHHHHHHHHHHhCCCEEEEec
Confidence 23456788899999999877754
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.00 E-value=0.37 Score=37.60 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=28.1
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR 416 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D 416 (668)
.+++|.| .|+||..++..|.+.|.+|+++..+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 4699998 6999999999999999999887644
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=82.99 E-value=0.41 Score=36.96 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=26.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
.+|+|.| .|++|..++..|.+.|.+|+++.
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve 52 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFGTKVTILE 52 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC-CCccceeeeeeecccccEEEEEE
Confidence 5899998 69999999999999999987664
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=82.81 E-value=0.31 Score=41.06 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=27.5
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKG 415 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~ 415 (668)
|||-|.| .|.+|..|++.|++.||+|.....
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr 32 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNR 32 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEEC
Confidence 7999998 899999999999999999866543
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=82.76 E-value=0.62 Score=38.73 Aligned_cols=19 Identities=5% Similarity=-0.085 Sum_probs=15.0
Q ss_pred hhhhhhHHHHHHHHHcCCc
Q 005949 460 TNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 460 ~Nv~~~~~ll~~~~~~~~~ 478 (668)
-|+.-...+++.++++.-+
T Consensus 126 rn~~i~~~i~~~i~~~~p~ 144 (171)
T d1obba1 126 NQLKYFVDIARKIEKLSPK 144 (171)
T ss_dssp HHHHHHHHHHHHHHHHCTT
T ss_pred chHHHHHHHHHHHHHHCcC
Confidence 4778888899999888653
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=82.66 E-value=2.3 Score=36.81 Aligned_cols=74 Identities=15% Similarity=0.207 Sum_probs=46.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCC
Q 005949 3 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESID 82 (668)
Q Consensus 3 ~~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (668)
+.++++|+|-| .|-+|+++++.|.+. +.++++.+.... .+..... ..+... .+.+ +++ ..+||
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~--Gakvv~~d~~~~--~~~~~~~---~~g~~~-----~~~~---~~~-~~~cD 98 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTE--GAKLVVTDVNKA--AVSAAVA---EEGADA-----VAPN---AIY-GVTCD 98 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHH--HHHHHHH---HHCCEE-----CCGG---GTT-TCCCS
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEeecccHH--HHHHHHH---hcCCcc-----cCCc---ccc-ccccc
Confidence 35678999998 799999999999999 788888765321 1111100 011111 1222 122 36899
Q ss_pred EEEEcCccCCc
Q 005949 83 TIMHFAAQTHV 93 (668)
Q Consensus 83 ~Vih~a~~~~~ 93 (668)
+++-||-....
T Consensus 99 Il~PcA~~~~I 109 (230)
T d1leha1 99 IFAPCALGAVL 109 (230)
T ss_dssp EEEECSCSCCB
T ss_pred Eeccccccccc
Confidence 99999976543
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=82.55 E-value=1.4 Score=36.26 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=27.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
|||.|=| -|-||+.+.|.|.++ +.+++.+...
T Consensus 1 ikigING-fGRIGR~~~R~l~~~--~i~iv~INd~ 32 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSR--GVEVALINDL 32 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH--TCCEEEEECS
T ss_pred CEEEEEC-CcHHHHHHHHHHhcC--CCEEEEECCC
Confidence 4788886 899999999999988 7888887654
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=82.49 E-value=2.1 Score=35.11 Aligned_cols=43 Identities=26% Similarity=0.312 Sum_probs=32.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhh
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQ 428 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~ 428 (668)
|||.|=| -|.||+.+.+.|.+++.++..+. |+.+.+.+.-+|+
T Consensus 1 ikigING-fGRIGR~~~R~l~~~~i~iv~IN-d~~~~~~~ayLl~ 43 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSRGVEVALIN-DLTDNKTLAHLLK 43 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEE-CSSCHHHHHHHHH
T ss_pred CEEEEEC-CcHHHHHHHHHHhcCCCEEEEEC-CCcchhhhhheee
Confidence 6888887 89999999999999987765444 5566665554444
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.48 E-value=0.53 Score=39.91 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=34.4
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
.|||+||+|-+|...++.+...|.++.+...+ ..+....+.++...|.||+.-
T Consensus 33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~--~~e~~~~l~~~~gad~vi~~~ 85 (187)
T d1vj1a2 33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICG--TQEKCLFLTSELGFDAAVNYK 85 (187)
T ss_dssp EEEESSTTSTTGGGHHHHHHHTTCSEEEEEES--SHHHHHHHHHHSCCSEEEETT
T ss_pred EEEEECCCchhhHHHHHHHHHcCCcceecccc--hHHHHhhhhhcccceEEeecc
Confidence 69999999999999999999999764322211 122222233334456666653
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=82.46 E-value=0.73 Score=41.23 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=30.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.+||+|+|| |..|..++..|.++ +++|+++.+..
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~--G~~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDA--GVDVDVYERSP 37 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 469999995 99999999999998 78999998753
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=82.19 E-value=2 Score=35.26 Aligned_cols=27 Identities=22% Similarity=0.161 Sum_probs=23.2
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFE 411 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~ 411 (668)
.+|+|+| +|-+|...++.+...|.+|.
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi 54 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYGAFVV 54 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEc-ccccchhhHhhHhhhccccc
Confidence 3799997 78999999999999998653
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=82.15 E-value=2.7 Score=36.88 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
.++++|+|-| .|-+|+++++.|.+. +.+|+.++..
T Consensus 29 l~g~~v~IqG-fGnVG~~~a~~L~~~--Gakvv~vsD~ 63 (242)
T d1v9la1 29 IEGKTVAIQG-MGNVGRWTAYWLEKM--GAKVIAVSDI 63 (242)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEECS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHc--CCeEEEeecc
Confidence 4678999998 899999999999998 7888877653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=82.09 E-value=0.94 Score=37.54 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD 42 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~ 42 (668)
.++++|||.|+ |..+++++-.|.+. +.+++++.|..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~--g~~i~I~nRt~ 51 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSL--DCAVTITNRTV 51 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhccc--ceEEEeccchH
Confidence 35789999995 88899999999998 56899988864
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.04 E-value=3 Score=32.39 Aligned_cols=78 Identities=9% Similarity=-0.099 Sum_probs=48.7
Q ss_pred cEEEEEcCC---cchhHHHHHHHHHcC-Ccccccccc---c---CChhHHHHHhhhcCCCEEEEcccccCCCCccccccc
Q 005949 384 MKFLIYGRT---GWIGGLLGKLCEKEG-IPFEYGKGR---L---EDCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESH 453 (668)
Q Consensus 384 mkvli~G~~---G~iG~~l~~~l~~~g-~~v~~~~~D---~---~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~ 453 (668)
.+|.|.|+| +..|..+.+.|.+.| ++|..+.-. + .-..++.++ ...+|.++-+..
T Consensus 9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dl--p~~vDlvvi~vp------------- 73 (129)
T d2csua1 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDI--PDEIDLAIIVVP------------- 73 (129)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSC--SSCCSEEEECSC-------------
T ss_pred CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhc--CCCCceEEEecC-------------
Confidence 479999999 889999999998766 344333211 1 011111111 125688776654
Q ss_pred cccceehhhhhhHHHHHHHHHcCCcEEEEec
Q 005949 454 KTDTIRTNVAGTLTLADVCRDHGILMMNYAT 484 (668)
Q Consensus 454 ~~~~~~~Nv~~~~~ll~~~~~~~~~~v~~sS 484 (668)
-..+..+++.|.+.|++.+++-|
T Consensus 74 --------~~~~~~~~~~~~~~g~~~~vi~s 96 (129)
T d2csua1 74 --------KRFVKDTLIQCGEKGVKGVVIIT 96 (129)
T ss_dssp --------HHHHHHHHHHHHHHTCCEEEECC
T ss_pred --------hHHhHHHHHHHHHcCCCEEEEec
Confidence 23455688999999998655544
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=82.03 E-value=0.83 Score=38.34 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=40.4
Q ss_pred CCCCeEEEEcCCChhHHHH-HHHHHHhCCCCEEEEE-cCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCC
Q 005949 4 YTPKNILITGAAGFIASHV-CNRLIRNYPEYKIVVL-DKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESI 81 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l-~~~L~~~g~~~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
|++.||.|+| +|.+|+.+ +..|.+....++++++ ++... ..+.+.... +...+. ++++++++..++
T Consensus 1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~--~~~~~~~~~---~~~~~~------~~~~ell~~~~i 68 (181)
T d1zh8a1 1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRS--HAEEFAKMV---GNPAVF------DSYEELLESGLV 68 (181)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHH--HHHHHHHHH---SSCEEE------SCHHHHHHSSCC
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHh--hhhhhhccc---ccccee------eeeecccccccc
Confidence 5567999998 79999874 5666654445677755 44321 111111110 111122 234556666789
Q ss_pred CEEEEcC
Q 005949 82 DTIMHFA 88 (668)
Q Consensus 82 d~Vih~a 88 (668)
|+|+-+.
T Consensus 69 d~v~I~t 75 (181)
T d1zh8a1 69 DAVDLTL 75 (181)
T ss_dssp SEEEECC
T ss_pred ceeeccc
Confidence 9988543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=81.88 E-value=0.87 Score=37.89 Aligned_cols=77 Identities=10% Similarity=0.050 Sum_probs=45.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCe-EEEEcc-CC-CHHHHHHHhccCCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNF-KFVKGD-IA-SADLVNFLLITESID 82 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D-l~-d~~~~~~~~~~~~~d 82 (668)
+.+|+|+|+ |-+|...+..+...+ ...|+++++.+.. ++.. . ..+. +.+..+ -. ..+.........++|
T Consensus 29 g~~VlI~G~-Gg~g~~~~~~~~~~g-~~~Vi~~~~~~~r--l~~a-~---~~GAd~~in~~~~~~~~~~~~~~~~~~G~d 100 (175)
T d1cdoa2 29 GSTCAVFGL-GAVGLAAVMGCHSAG-AKRIIAVDLNPDK--FEKA-K---VFGATDFVNPNDHSEPISQVLSKMTNGGVD 100 (175)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSCGGG--HHHH-H---HTTCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCEEEEEec-CCccchHHHHHHHHh-hchheeecchHHH--HHHH-H---HcCCcEEEcCCCcchhHHHHHHhhccCCcc
Confidence 568999986 668888777777765 6688888886431 1111 1 1122 222211 11 123444444456899
Q ss_pred EEEEcCcc
Q 005949 83 TIMHFAAQ 90 (668)
Q Consensus 83 ~Vih~a~~ 90 (668)
+||.+.|.
T Consensus 101 ~vid~~G~ 108 (175)
T d1cdoa2 101 FSLECVGN 108 (175)
T ss_dssp EEEECSCC
T ss_pred eeeeecCC
Confidence 99999885
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=81.84 E-value=0.47 Score=36.89 Aligned_cols=30 Identities=27% Similarity=0.376 Sum_probs=26.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
.+|+|.| +|++|..++..|.++|.+|.++.
T Consensus 31 ~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~ 60 (121)
T d1d7ya2 31 SRLLIVG-GGVIGLELAATARTAGVHVSLVE 60 (121)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEC-cchhHHHHHHHhhcccceEEEEe
Confidence 4799998 79999999999999999887664
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=81.82 E-value=0.96 Score=37.35 Aligned_cols=51 Identities=22% Similarity=0.367 Sum_probs=38.0
Q ss_pred EEEEEcCCcchhHHHHHHHHHcCCcccccccccCChhHHHHHhhhcCCCEEEEcc
Q 005949 385 KFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLEDCSSLIADVQSVKPTHVFNAA 439 (668)
Q Consensus 385 kvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~d~~~~~~~l~~~~~d~Vih~a 439 (668)
.|||+||+|-+|...++.....|.+|....++-...+ .+++...|.|++--
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~----~~~~lGad~vi~~~ 76 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD----YLKQLGASEVISRE 76 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH----HHHHHTCSEEEEHH
T ss_pred EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH----HHHhhcccceEecc
Confidence 5999999999999999999999998865554433333 33444568888754
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=81.79 E-value=0.91 Score=36.93 Aligned_cols=54 Identities=9% Similarity=0.143 Sum_probs=37.5
Q ss_pred EEEEE-cCCcchhHHHHHHHHHcCCcccccccc--------cCChhHHHHHhhhcCCCEEEEc
Q 005949 385 KFLIY-GRTGWIGGLLGKLCEKEGIPFEYGKGR--------LEDCSSLIADVQSVKPTHVFNA 438 (668)
Q Consensus 385 kvli~-G~~G~iG~~l~~~l~~~g~~v~~~~~D--------~~d~~~~~~~l~~~~~d~Vih~ 438 (668)
.++|. .|.||||..++..|.++|++|+++..+ -.....+.+.|.+..++++.+.
T Consensus 41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~~~ 103 (156)
T d1djqa2 41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVEELGDH 103 (156)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTHHHHTTCHHHHHHHHHHTTCEEEETE
T ss_pred ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccccccchhHHHHHHHHHhhccceEEecc
Confidence 45554 467999999999999999999877543 1233456666776655555443
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=81.30 E-value=0.78 Score=38.49 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=42.9
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccccC-----ChhHHHHHhhhcCCCEEEEccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGRLE-----DCSSLIADVQSVKPTHVFNAAGVT 442 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D~~-----d~~~~~~~l~~~~~d~Vih~a~~~ 442 (668)
++|.|.| .|-||+.+++.|..-|.+|..+..+.. -.++++++++.+ |+|+.++..+
T Consensus 43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~s--Div~~~~pl~ 103 (181)
T d1qp8a1 43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREA--RAAVCALPLN 103 (181)
T ss_dssp CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTC--SEEEECCCCS
T ss_pred ceEEEec-cccccccceeeeeccccccccccccccccceeeeechhhhhhcc--chhhcccccc
Confidence 5899998 799999999999999988765543322 234677888887 9988776544
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=81.27 E-value=0.54 Score=36.64 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=26.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
.+|+|.| .||+|..++..|.+.|.+|+++.
T Consensus 31 k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie 60 (123)
T d1nhpa2 31 NNVVVIG-SGYIGIEAAEAFAKAGKKVTVID 60 (123)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEC-ChHHHHHHHHHhhccceEEEEEE
Confidence 4789887 79999999999999999887764
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=81.25 E-value=0.4 Score=40.08 Aligned_cols=95 Identities=11% Similarity=0.057 Sum_probs=56.0
Q ss_pred CCCcEEEEEcCCcchhHHHHHHHHHcCC--cccccccc---------cCChhHHHHHhhhcCCCEEEEcccccCCCCccc
Q 005949 381 KPSMKFLIYGRTGWIGGLLGKLCEKEGI--PFEYGKGR---------LEDCSSLIADVQSVKPTHVFNAAGVTGRPNVDW 449 (668)
Q Consensus 381 ~~~mkvli~G~~G~iG~~l~~~l~~~g~--~v~~~~~D---------~~d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~ 449 (668)
..++||.|.| .|++|+..++.|.+... .+.++..+ -....++++++++.++|+|+-+..... +...
T Consensus 5 ~~k~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~iD~V~I~tp~~~--H~~~ 81 (172)
T d1lc0a1 5 SGKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVRQISLEDALRSQEIDVAYICSESSS--HEDY 81 (172)
T ss_dssp CCSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEEBCCHHHHHHCSSEEEEEECSCGGG--HHHH
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHhhccCcCCHHHHHhCCCcchhhhcccccc--cccc
Confidence 3457999998 69999998887776531 11111100 001124677888878899987664220 0111
Q ss_pred c---cccccc-----ceehhhhhhHHHHHHHHHcCCc
Q 005949 450 C---ESHKTD-----TIRTNVAGTLTLADVCRDHGIL 478 (668)
Q Consensus 450 ~---~~~~~~-----~~~~Nv~~~~~ll~~~~~~~~~ 478 (668)
. ...-.. -+..|+.-...|+++++++++.
T Consensus 82 ~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~ 118 (172)
T d1lc0a1 82 IRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (172)
T ss_dssp HHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred cccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence 0 111111 1246888889999999999865
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.21 E-value=0.57 Score=40.26 Aligned_cols=79 Identities=13% Similarity=0.065 Sum_probs=44.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHhCCCCEEEEE-cCCCccCCccc---cCCCcCCCCeEEEE-ccCCCHHHHHHHhccCCC
Q 005949 7 KNILITGAAGFIASHVCNRLIRNYPEYKIVVL-DKLDYCSNLKN---LIPSKASSNFKFVK-GDIASADLVNFLLITESI 81 (668)
Q Consensus 7 ~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~-~r~~~~~~~~~---~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~ 81 (668)
|||+|.| ++..|..+++.|++. +++|.++ .+.+....... +.......++.++. .++.+.+.+ +.+...++
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~--g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~-~~i~~~~~ 76 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAA--GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWV-ERIAQLSP 76 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHT--TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHH-HHHHHTCC
T ss_pred CeEEEEe-cCHHHHHHHHHHHHC--CCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhh-hhhhhhcc
Confidence 5888886 566899999999998 5666543 33221110000 00000112344444 456665544 55556899
Q ss_pred CEEEEcCc
Q 005949 82 DTIMHFAA 89 (668)
Q Consensus 82 d~Vih~a~ 89 (668)
|++|-+..
T Consensus 77 Dlii~~g~ 84 (203)
T d2blna2 77 DVIFSFYY 84 (203)
T ss_dssp SEEEEESC
T ss_pred cceeeeec
Confidence 99887654
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.15 E-value=1.2 Score=36.36 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCC
Q 005949 4 YTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL 41 (668)
Q Consensus 4 ~~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~ 41 (668)
+.+|+|+|+| .|.||+.+++.|... +.+|++.+..
T Consensus 22 l~Gk~v~V~G-yG~iG~g~A~~~rg~--G~~V~v~e~d 56 (163)
T d1li4a1 22 IAGKVAVVAG-YGDVGKGCAQALRGF--GARVIITEID 56 (163)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred ecCCEEEEec-cccccHHHHHHHHhC--CCeeEeeecc
Confidence 4578999998 899999999999988 7888888774
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=80.85 E-value=3.1 Score=34.32 Aligned_cols=31 Identities=13% Similarity=0.009 Sum_probs=26.4
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCccccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKG 415 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~ 415 (668)
.+|-|.| .|.+|..|++.|++.||+|..+..
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr 33 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNR 33 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcC
Confidence 3688998 799999999999999998866543
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=80.73 E-value=1.7 Score=33.12 Aligned_cols=76 Identities=13% Similarity=0.059 Sum_probs=49.4
Q ss_pred cEEEEEcCC---cchhHHHHHHHHHcCCcccccccc---cC---ChhHHHHHhhhcCCCEEEEcccccCCCCcccccccc
Q 005949 384 MKFLIYGRT---GWIGGLLGKLCEKEGIPFEYGKGR---LE---DCSSLIADVQSVKPTHVFNAAGVTGRPNVDWCESHK 454 (668)
Q Consensus 384 mkvli~G~~---G~iG~~l~~~l~~~g~~v~~~~~D---~~---d~~~~~~~l~~~~~d~Vih~a~~~~~~~~~~~~~~~ 454 (668)
++|.|.|+| +-.|..+.+.|++.||+|..+.-. +. -..++.++-+ .||.++-+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~--~~D~vvi~vp-------------- 65 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPK--DVDVIVFVVP-------------- 65 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCT--TCCEEEECSC--------------
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccc--cceEEEEEeC--------------
Confidence 369999988 668999999999999986444322 11 1122221111 4687765543
Q ss_pred ccceehhhhhhHHHHHHHHHcCCcEEEE
Q 005949 455 TDTIRTNVAGTLTLADVCRDHGILMMNY 482 (668)
Q Consensus 455 ~~~~~~Nv~~~~~ll~~~~~~~~~~v~~ 482 (668)
-..+..+++.|.+.|++.+++
T Consensus 66 -------~~~~~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 66 -------PKVGLQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp -------HHHHHHHHHHHHHTTCCEEEE
T ss_pred -------HHHHHHHHHHHHhcCCceEEe
Confidence 234566888899999987755
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.72 E-value=1.1 Score=36.91 Aligned_cols=57 Identities=16% Similarity=0.093 Sum_probs=42.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccccc--------------------c--CChhHHHHHhhhcCCCEEEEcccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGKGR--------------------L--EDCSSLIADVQSVKPTHVFNAAGV 441 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~~D--------------------~--~d~~~~~~~l~~~~~d~Vih~a~~ 441 (668)
++++|.|.|.-+|+.|+..|+++|..|.....+ + ...+.+.+..... |+||..+|.
T Consensus 30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~a--DIvIsavG~ 107 (171)
T d1edza1 30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS--DVVITGVPS 107 (171)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC--SEEEECCCC
T ss_pred CEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccC--CEEEEccCC
Confidence 589999999999999999999999766433211 1 1234466666666 999999985
Q ss_pred c
Q 005949 442 T 442 (668)
Q Consensus 442 ~ 442 (668)
.
T Consensus 108 p 108 (171)
T d1edza1 108 E 108 (171)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=80.49 E-value=2.3 Score=31.06 Aligned_cols=72 Identities=19% Similarity=0.202 Sum_probs=46.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
+.++|.++|-+|-==++|++.|.++ |++|.+.|+... .....+. ..++.+..++-. +. + .+.|.|
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~--G~~VsGSD~~~~-~~~~~L~----~~Gi~v~~g~~~--~~----i--~~~d~v 71 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADG-VVTQRLA----QAGAKIYIGHAE--EH----I--EGASVV 71 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCS-HHHHHHH----HTTCEEEESCCG--GG----G--TTCSEE
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhC--CCEEEEEeCCCC-hhhhHHH----HCCCeEEECCcc--cc----C--CCCCEE
Confidence 3579999985443337889999999 789999998642 2222221 235666554432 21 2 568999
Q ss_pred EEcCccC
Q 005949 85 MHFAAQT 91 (668)
Q Consensus 85 ih~a~~~ 91 (668)
|...|..
T Consensus 72 V~S~AI~ 78 (96)
T d1p3da1 72 VVSSAIK 78 (96)
T ss_dssp EECTTSC
T ss_pred EECCCcC
Confidence 9887763
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=80.21 E-value=0.65 Score=35.60 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=26.3
Q ss_pred cEEEEEcCCcchhHHHHHHHHHcCCcccccc
Q 005949 384 MKFLIYGRTGWIGGLLGKLCEKEGIPFEYGK 414 (668)
Q Consensus 384 mkvli~G~~G~iG~~l~~~l~~~g~~v~~~~ 414 (668)
.+++|.| .|++|..++..|.+.|++|+++.
T Consensus 22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve 51 (115)
T d1lvla2 22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVE 51 (115)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CeEEEEC-CCHHHHHHHHHHhhcccceEEEe
Confidence 4799998 79999999999999999887664
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=80.20 E-value=1.3 Score=33.84 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=28.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHhCC-CCEEEEEcCCC
Q 005949 6 PKNILITGAAGFIASHVCNRLIRNYP-EYKIVVLDKLD 42 (668)
Q Consensus 6 ~~~vLVtGgtG~iG~~l~~~L~~~g~-~~~v~~~~r~~ 42 (668)
+++++|+|| |++|-.++..|.+... +.+|+++.+.+
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 579999995 9999999987765432 67888888753
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=80.04 E-value=0.89 Score=37.20 Aligned_cols=73 Identities=12% Similarity=0.164 Sum_probs=0.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHHhCCCCEEEEEcCCCccCCccccCCCcCCCCeEEEEccCCCHHHHHHHhccCCCCEE
Q 005949 5 TPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVKGDIASADLVNFLLITESIDTI 84 (668)
Q Consensus 5 ~~~~vLVtGgtG~iG~~l~~~L~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 84 (668)
.+-+|+|+|| |-.|..-++..... +-+|+++|.+. ..++++.......-... ..+.+.+.+.+ .++|+|
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~l--GA~V~~~D~~~--~~l~~l~~~~~~~~~~~----~~~~~~l~~~~--~~aDiv 99 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGL--GAQVQIFDINV--ERLSYLETLFGSRVELL----YSNSAEIETAV--AEADLL 99 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCH--HHHHHHHHHHGGGSEEE----ECCHHHHHHHH--HTCSEE
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhC--CCEEEEEeCcH--HHHHHHHHhhcccceee----hhhhhhHHHhh--ccCcEE
Q ss_pred EEcC
Q 005949 85 MHFA 88 (668)
Q Consensus 85 ih~a 88 (668)
|-++
T Consensus 100 I~aa 103 (168)
T d1pjca1 100 IGAV 103 (168)
T ss_dssp EECC
T ss_pred EEee
|