Citrus Sinensis ID: 006085

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660--
MALLFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNYTGKN
cHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHccccccccccccEEEEEEEEcccEEEEEEEcccccEEEEEEEcccccccccHHHHHHHHHHHHHcHHHHHHHHHcccccccEEEcccccccccccccEEEEEEEEEEEEccccccccccccccEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccEEEcccEEEEccEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEccEEEEEccccccccccEEEEcccccccccccccccccccccccEEEEEEEEEccccccEEEccEEEEEEEEccccEEEcccccccccEEEEEEcEEEEEEEEEEEcccccEEEEEEEEcccEEEEEEEEEEEEEEEEEccccccccccccccEEccccccccccEEEEEEEEEccccccccEEEEEEEEEccccccccccEEEEEEEEEEEcHHHHHHcccccccEEEEEcccccccccccEEEEEccccccccccccccHHHHccccccccEEEEEcccccccccccccccccccccHHHHcccccccccccEEEEEEEccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccc
cHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEccccHHHHHHHccccccccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEEEEEEccccccccccccEEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHcccccccccccEEEccccccEEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEcEEEEEccccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEccccccccccccccccEcccccccccc
MALLFLLFSVTAvlpissskrhpldslrpseftRVQTIVKtsypsnnlsfhyvgmdepdkAVVYSWLsnsktkfprRAIVIARHNHQTHEIIVDLSkrsivsdkvytghgfplltlEEQHAGAALVLAYEPFkasvkkrglnisdvvcsastvgwygekkskrvlkfpcfytdqgtinmflrpiegITIVVDIEEmkvteyndrevapipkpepteyrlsklkppfgprlnsvatsstrpgfkingntVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISelfipyqdpsegwyhityfdngefgfgltavplerlndcpanavfmdgyfasqdgtpvktpnaVCIFErhagdvmwrhteaempghvrevrpEVSLVVRMVATVgnydyiidwefkpsgsikmgvglsgvlevkpveytyvdqikedqhgtlvadnsiainhDHFLNYYLDLDIDGYANSFEKTKLvtrrntnvntprksyWTVEKETAKTEFEARlnldtkpmefalvnpskktkighpvgyrllpgsiigpmlmeddypqiragftnynvwvtpykksekysggnyvdqshgddtllqwtdgnreienTDIVLWYTmgihhapcqedfpvmptvscgfelrptnffeynpvlkvippkhvqrpnytgkn
MALLFLLFSVTAvlpissskrhpldslrpsefTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVcsastvgwygekkskrvlkFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVteyndrevapipkpepteyrlsklkppfgprlnsvatsstrpgfkingntVKWANWVFNVGFDARVGTIISTAsiydinmhKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAempghvrevrpeVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEktklvtrrntnvntprksywtvekETAKTEFearlnldtkpmEFALvnpskktkighpvgYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEynpvlkvippkhvqrpnytgkn
MALLFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNYTGKN
**LLFLLFSVTAVLPI***************FTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYN**************************************GFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIP*************
MALLF**F*************HPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPT**************************FKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPML****YPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKV***************
MALLFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNYTGKN
MALLFLLFSVTAVLPI***KRHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKH**********
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SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALLFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYPSNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNYTGKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query662 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.980 0.962 0.537 0.0
P49252667 Primary amine oxidase (Fr N/A no 0.981 0.974 0.534 0.0
Q8H1H9712 Primary amine oxidase OS= no no 0.945 0.879 0.473 1e-171
P46883757 Primary amine oxidase OS= N/A no 0.924 0.808 0.331 8e-89
P49250755 Primary amine oxidase OS= yes no 0.919 0.806 0.336 1e-86
P80695752 Primary amine oxidase OS= yes no 0.919 0.809 0.325 4e-83
Q07123648 Copper methylamine oxidas N/A no 0.906 0.925 0.292 9e-69
Q07121648 Primary amine oxidase OS= N/A no 0.906 0.925 0.292 9e-69
Q59118684 Histamine oxidase OS=Arth N/A no 0.927 0.897 0.294 1e-67
P46881638 Phenylethylamine oxidase N/A no 0.918 0.952 0.271 1e-58
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/658 (53%), Positives = 472/658 (71%), Gaps = 9/658 (1%)

Query: 4   LFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYP--SNNLSFHYVGMDEPDKA 61
           L    +V +V P+    +HPLD L   EF  VQTIV+  YP  +N L+FHY+G+D+P+K 
Sbjct: 17  LLSFHAVVSVTPLHV--QHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKD 74

Query: 62  VVYSWLSN-SKTKFPRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQH 120
            V  + ++ +    PR+  V+A  N QTHEI+++L  RSIVSD ++ G+GFP+L+++EQ 
Sbjct: 75  HVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQS 134

Query: 121 AGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMF 180
               L L Y PF  SVKKRGLN+S++VCS+ T+GW+GE+K+ R ++  CF   + T+N++
Sbjct: 135 LAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCF-MKESTVNIY 193

Query: 181 LRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTR- 239
           +RPI GITIV D++ MK+ EY+DR++  +P  E TEY++SK  PPFGP+ +S+ +   + 
Sbjct: 194 VRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQG 253

Query: 240 PGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQD 299
           PGF+ING++V WANW F++GFD R G +IS ASIYD+  HK RRVLY+G+ISELF+PYQD
Sbjct: 254 PGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQD 313

Query: 300 PSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFE 359
           P+E +Y  T+FD+GEFGFGL+ V L    DCP +A F+D Y  S +GTP+   NA+C+FE
Sbjct: 314 PTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFE 373

Query: 360 RHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGL 418
           ++ G++MWRHTE  +P   + E R EV+L+VR + TVGNYD +IDWEFK SGSIK  + L
Sbjct: 374 QY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIAL 432

Query: 419 SGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLV 478
           SG+LE+K     + D+IKED HG LV+ NSI I HDHF  YYLD DIDG  NSFEKT L 
Sbjct: 433 SGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLK 492

Query: 479 TRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLP 538
           T R  + ++ RKSYWT E +TAKTE +A++ +   P E  +VNP+ KT +G+ VGYRL+P
Sbjct: 493 TVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIP 552

Query: 539 GSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNRE 598
                P+L EDDYPQIR  FTNYNVWVT Y ++EK++GG YVD S GDDTL  WT  NRE
Sbjct: 553 AIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNRE 612

Query: 599 IENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRP 656
           I N DIV+W+ +GIHH P QEDFP+MP +S  FELRPTNFFE NPVLK + P+ V  P
Sbjct: 613 IVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWP 670

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query662
225432636674 PREDICTED: primary amine oxidase [Vitis 0.969 0.952 0.663 0.0
225432632667 PREDICTED: primary amine oxidase [Vitis 0.966 0.959 0.638 0.0
147794975644 hypothetical protein VITISV_029120 [Viti 0.925 0.951 0.633 0.0
357444253675 Primary amine oxidase [Medicago truncatu 0.989 0.970 0.612 0.0
147806124654 hypothetical protein VITISV_012123 [Viti 0.947 0.958 0.629 0.0
356574404 1162 PREDICTED: primary amine oxidase-like [G 0.965 0.549 0.610 0.0
356575837675 PREDICTED: primary amine oxidase-like [G 0.966 0.948 0.606 0.0
356574406677 PREDICTED: primary amine oxidase-like [G 0.989 0.967 0.600 0.0
255551463666 Amine oxidase [copper-containing] precur 0.954 0.948 0.619 0.0
224102055668 predicted protein [Populus trichocarpa] 0.975 0.967 0.577 0.0
>gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/650 (66%), Positives = 515/650 (79%), Gaps = 8/650 (1%)

Query: 19  SKRHPLDSLRPSEFTRVQTIVKTSYP--SNNLSFHYVGMDEPDKAVVYSWLSNSKTKF-- 74
           S  HPLDSL PSEF +VQ IV  S P  S+N++F YVG+DEPDK  + SWLSN  +    
Sbjct: 25  SHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTLP 84

Query: 75  -PRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFK 133
            PRRA VI R + QTHEIIVDLS +SIVSDKVY+GHG+PLLT EEQ A + L L Y PF 
Sbjct: 85  PPRRAFVITRLHSQTHEIIVDLSTQSIVSDKVYSGHGYPLLTSEEQTAASELPLTYPPFI 144

Query: 134 ASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDI 193
           AS++KR L +SDVVCS  TVGW+GE+KS+RVLK  CFYTD GT N+++RPIEG+TIVVD+
Sbjct: 145 ASIRKRKLKLSDVVCSTFTVGWFGEEKSRRVLKILCFYTD-GTANLYMRPIEGVTIVVDL 203

Query: 194 EEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVAT-SSTRPGFKINGNTVKWA 252
           +EMK+TEY+DR   P+P+ E TEYRLSK KPPFGPRLN V++     PGFKI+G+ ++WA
Sbjct: 204 DEMKITEYHDRLTVPMPEAEGTEYRLSKQKPPFGPRLNGVSSMQPDGPGFKIDGHNIRWA 263

Query: 253 NWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDN 312
           NW F+V FDAR G IIS ASIYD+    +RRVLYRG++SELF+PY DP+E WY+ T+FD 
Sbjct: 264 NWDFHVSFDARAGLIISLASIYDLQKRTFRRVLYRGYLSELFVPYMDPTEEWYYKTFFDL 323

Query: 313 GEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEA 372
           GEFGFGL  VPL+ L DCP+NAVFMDGY+A QDG PVK  NA CIFE+ AG +MWRHTE 
Sbjct: 324 GEFGFGLCTVPLQPLADCPSNAVFMDGYYAGQDGKPVKISNAFCIFEQQAGRIMWRHTEV 383

Query: 373 EMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTY 431
           E+PG  +REVRPEVSLVVRMVATVGNYDYI+DWEFKPSGSIK+GVGL+G+LEVK V YT+
Sbjct: 384 EIPGEEIREVRPEVSLVVRMVATVGNYDYILDWEFKPSGSIKLGVGLTGILEVKGVSYTH 443

Query: 432 VDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKS 491
             QIKED +GTL+A N+I +NHDHFL Y+LDLD+DG ANSF K  L T+R  +  +PRKS
Sbjct: 444 TSQIKEDVYGTLLAHNTIGVNHDHFLTYHLDLDVDGDANSFVKANLETKRVKDNISPRKS 503

Query: 492 YWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDY 551
           YWTV  ETAKTE +A++ L  KP E  +VNP+KKTK+G+ VGYRL+PGS+  P+L +DDY
Sbjct: 504 YWTVVSETAKTESDAQIQLGLKPAELIVVNPNKKTKLGNYVGYRLIPGSLSSPLLSDDDY 563

Query: 552 PQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMG 611
           PQIR  FT Y+VW+TPY KSEK++GG Y+DQS GDDTL  W+  NREIEN DIVLWYT+G
Sbjct: 564 PQIRGAFTKYDVWITPYNKSEKWAGGLYMDQSRGDDTLAVWSQRNREIENKDIVLWYTIG 623

Query: 612 IHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNYTGK 661
            HH PCQEDFPVMPT+S GFELRPTNFFE NPVLK  PP +   PN T K
Sbjct: 624 FHHVPCQEDFPVMPTLSGGFELRPTNFFERNPVLKTKPPTYGHWPNCTTK 673

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357444253|ref|XP_003592404.1| Primary amine oxidase [Medicago truncatula] gi|355481452|gb|AES62655.1| Primary amine oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|147806124|emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574404|ref|XP_003555338.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356575837|ref|XP_003556043.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356574406|ref|XP_003555339.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255551463|ref|XP_002516777.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543865|gb|EEF45391.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224102055|ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query662
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.993 0.966 0.571 3.7e-213
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.998 0.976 0.568 1.6e-212
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.941 0.840 0.569 1e-203
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.981 0.964 0.542 3.3e-198
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.959 0.976 0.525 3.8e-181
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.945 0.879 0.473 6.5e-161
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.954 0.852 0.460 1.6e-157
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.977 0.941 0.443 5.8e-153
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.922 0.807 0.339 2.8e-89
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.410 0.906 0.503 9e-77
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2060 (730.2 bits), Expect = 3.7e-213, P = 3.7e-213
 Identities = 385/674 (57%), Positives = 500/674 (74%)

Query:     4 LFLLFSVTAVLPISS--SKRHPLDSLRPSEFTRVQTIVKTSYP---SNNLSFHYVGMDEP 58
             + +LFS   V+  SS    RHP D L  +E   V+TI+  SYP   ++  +F YVG++EP
Sbjct:     8 ILILFSFVIVVSSSSFTPPRHPFDPLTETELKLVRTIINKSYPVGPNHKFTFQYVGLNEP 67

Query:    59 DKAVVYSWLSNSKTKF---PRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLT 115
             +K++V SW S+        PR+A VIAR N +T EI++D S R+IVSDK++ G+G+P+L+
Sbjct:    68 NKSLVLSWYSSPNHTIKPPPRQAFVIARDNGKTREIVLDFSSRAIVSDKIHVGNGYPMLS 127

Query:   116 LEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSK--RVLKFPCFYTD 173
              +EQ A   LV+ ++PF  SV KRGLN+S++V + ST+GWYGE K++  RV++   FY D
Sbjct:   128 NDEQEASTELVVKFKPFIDSVAKRGLNVSEIVFTTSTIGWYGETKAEAERVIRLMPFYLD 187

Query:   174 QGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRL-NS 232
              GT+NM+LRPIEG+TI+V+++EMKV+E+ DR V  +P    TEYR+SKL PPFGP L N+
Sbjct:   188 -GTVNMYLRPIEGMTIIVNLDEMKVSEFKDRSVVTMPIANGTEYRISKLNPPFGPTLHNA 246

Query:   233 VATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISE 292
             V      PGFK++G+ V+WANW F++ FD R G +IS AS++D +++KYR+VLY+G +SE
Sbjct:   247 VLLQPDGPGFKVDGHIVRWANWEFHISFDVRAGIVISLASLFDTDVNKYRQVLYKGHLSE 306

Query:   293 LFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTP 352
             +FIPY DPS+ WY ITY D G+FG G  AV L+   DCPA AVFMDG FA QDGTP K P
Sbjct:   307 MFIPYMDPSDDWYFITYLDCGDFGCGQCAVSLQPYTDCPAGAVFMDGIFAGQDGTPAKIP 366

Query:   353 NAVCIFERHAGDVMWRHTEAEMPG-HVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGS 411
               +CIFE++AGD+MWRHTEAE+P   + EVRP+VSLV R+V TVGNYDYI+D+EFKPSGS
Sbjct:   367 KVMCIFEKYAGDIMWRHTEAEIPNLEITEVRPDVSLVARIVTTVGNYDYIVDYEFKPSGS 426

Query:   412 IKMGVGLSGVLEVKPVEYTYVDQIK--EDQHGTLVADNSIAINHDHFLNYYLDLDIDGYA 469
             IKMGVGL+GVLEVKPVEY +  +IK  ED HGT+VADN++ +NHDHF+ + L LDIDG  
Sbjct:   427 IKMGVGLTGVLEVKPVEYIHTSEIKLGEDIHGTIVADNTVGVNHDHFVTFRLHLDIDGTE 486

Query:   470 NSFEKTKLVTRRNT-NVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKI 528
             NSF + +LVT R+  +VNTPRK+YWT + +TAKTE EAR+ L  K  E  +VNP++KTK 
Sbjct:   487 NSFVRNELVTTRSPKSVNTPRKTYWTTKPKTAKTEAEARVKLGLKAEELVVVNPNRKTKH 546

Query:   529 GHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDT 588
             G+ VGYRLL GS  GP+L +DD+PQIRA FTNYNVW+TPY +SE ++GG Y D+S GDDT
Sbjct:   547 GNEVGYRLLHGSAAGPLLAQDDFPQIRAAFTNYNVWITPYNRSEVWAGGLYADRSQGDDT 606

Query:   589 LLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVI 648
             L  W+  NR+IE  DIV+WYT+G HH P QED+P MPT+S GFELRPTNFFE NPVLK  
Sbjct:   607 LAVWSQRNRKIEKEDIVMWYTVGFHHVPSQEDYPTMPTLSGGFELRPTNFFERNPVLKTK 666

Query:   649 PPKHVQRPNYTGKN 662
             P K       T KN
Sbjct:   667 PVKVTTARKCTPKN 680
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006569 "tryptophan catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49252AMO_LENCU1, ., 4, ., 3, ., 2, 10.53460.98180.9745N/Ano
P80695AMO_KLEOK1, ., 4, ., 3, ., 2, 10.32550.91990.8098yesno
P49250AMO_ENTAE1, ., 4, ., 3, ., 2, 10.33640.91990.8066yesno
Q43077AMO_PEA1, ., 4, ., 3, ., 2, 10.53790.98030.9629N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.946
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 1e-178
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-164
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-151
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-113
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 3e-23
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 2e-19
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  823 bits (2128), Expect = 0.0
 Identities = 363/654 (55%), Positives = 464/654 (70%), Gaps = 18/654 (2%)

Query: 1   MALLFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYPSN--NLSFHYVGMDEP 58
           + +L L+F +       +S  HPLD L P E  +++ IV+ S+  N  NL+FH++ ++EP
Sbjct: 3   IPILALVFILQCCF--VASLYHPLDPLNPQEINKIRLIVQKSHLGNLPNLTFHFLDLEEP 60

Query: 59  DKAVVYSWLSNSKTKF---PRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLT 115
           +K  V  WLS++ +     PRRA V+ R   +T+E+IVDL+  SI S +VYTGHG+P LT
Sbjct: 61  EKRDVLKWLSSNPSNKSPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLT 120

Query: 116 LEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQG 175
             E    + L L Y  FK S+ +RGLNIS+V C   TVGWYGE  +KR LK  CFY   G
Sbjct: 121 FIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGWYGETVTKRALKISCFYRG-G 179

Query: 176 TINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVAT 235
           ++N+F RPIEGI+I++D++ M++ +Y+DR  AP+PK E T++R    KP       S   
Sbjct: 180 SVNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRTKH-KP------FSFPC 232

Query: 236 SSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFI 295
           + +  GF I G+ VKWANW F+VGFDAR G  ISTAS++D  + ++RRVLYRG +SE F+
Sbjct: 233 NVSDSGFTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFV 292

Query: 296 PYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAV 355
           PY DP+  WY  T+ D GEFGFG +AV L+ L DCPANAV++DGY A  DG   K  N +
Sbjct: 293 PYMDPTSEWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVI 352

Query: 356 CIFERHAGDVMWRHTEAEMPGHV-REVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKM 414
           CIFER++GDV +RHTE  +PG V R   PE+SLVVRMVAT+GNYDYI+DWEFK SGSIK+
Sbjct: 353 CIFERYSGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKSGSIKV 412

Query: 415 GVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEK 474
           GV L+GVLE+K   YT  DQI +D +GTLVA+N+IA+NHDHFL YYLDLD+DG  NSF K
Sbjct: 413 GVDLTGVLEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVK 472

Query: 475 TKLVTRRNTNVNT--PRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPV 532
            KL T R T VN   PRKSYWTV KETAKTE E R+ L ++P E  +VNP+KKTK+G+ V
Sbjct: 473 AKLQTARVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTKLGNQV 532

Query: 533 GYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQW 592
           GYRL+ G  +  +L +DDYPQIRA +T Y VWVT Y KSE+++GG Y D+S GDD L  W
Sbjct: 533 GYRLITGQPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVW 592

Query: 593 TDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLK 646
           +  NREIEN DIVLWYT+G HH P QEDFPVMPT+  GFELRP NFFE NP+L+
Sbjct: 593 SSRNREIENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 662
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.89
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.77
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9.5e-191  Score=1596.14  Aligned_cols=625  Identities=34%  Similarity=0.590  Sum_probs=590.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCC-CCCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEe--CCeEEEEEEEC
Q 006085           19 SKRHPLDSLRPSEFTRVQTIVKTSYP-SNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARH--NHQTHEIIVDL   95 (662)
Q Consensus        19 ~~~HPldpLt~~Ei~~a~~il~~~~~-~~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~--~~~~~e~vV~L   95 (662)
                      ..+|||||||++||++|++||+++.+ +..++|.+|+|+||+|++|++|+.+++  ++|+|+|++++  +++++|++|||
T Consensus        11 ~~~HPLdpLt~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~g~~--~~R~a~v~~~~~~~~~~~e~vVdL   88 (647)
T PRK11504         11 AVSHPLDPLTAAEIEAAVAILRAEGLLGESTRFVSIELAEPPKAEVLAFDPGDP--IDRRAFVVLYDRATGKTYEAVVSL   88 (647)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhccccCCceEEEEeeccCCCHHHHHhhhcCCC--CCcEEEEEEEECCCCcEEEEEEEC
Confidence            33799999999999999999999875 689999999999999999999999865  47999999996  67899999999


Q ss_pred             CCCeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCC-C-CeeEEEEEEEEe
Q 006085           96 SKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGEK-K-SKRVLKFPCFYT  172 (662)
Q Consensus        96 ~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~~~~~~gi-~~~~v~~d~w~~G~~~~~-~-~rRl~~~~~~~~  172 (662)
                      ++++|++++.++ ++||+++.+|+.+||++|++||+|+++|+|||| +++.|+||||++||++.. + +|||+|++||+|
T Consensus        89 ~~~~V~~~~~~~-~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r  167 (647)
T PRK11504         89 TAGEVVSWEEIP-GVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEERGRRLARGLAFVR  167 (647)
T ss_pred             CCCEEEEEEECC-CccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcCCceEEEEEEEEe
Confidence            999999999887 679999999999999999999999999999999 588999999999988763 3 699999999999


Q ss_pred             eCCCCCcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEeceEEEe
Q 006085          173 DQGTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKINGNTVKW  251 (662)
Q Consensus       173 ~~~~~n~Ya~Pl~g~~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~~kP~~i~q-eG~sf~v~g~~V~W  251 (662)
                      .++++|+||||||||.++||++++||++|+|.+..|+|+.+ .+|+++.+. ++|+++||++|+| ||+||+|+||+|+|
T Consensus       168 ~~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v~g~~V~W  245 (647)
T PRK11504        168 ADPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTVDGNEVEW  245 (647)
T ss_pred             cCCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEEcCCEEEE
Confidence            88899999999999999999999999999999887888776 699988764 6899999999999 99999999999999


Q ss_pred             eceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCCCCcccceeeeecCCCCcccCCcCCCCCCCCC
Q 006085          252 ANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCP  331 (662)
Q Consensus       252 ~~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCp  331 (662)
                      |||+||||||+||||+||||+|+|  .|+.||||||+|||||+||||||+++|++|+|||+||||+|.+||+|++|||||
T Consensus       246 ~~W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCp  323 (647)
T PRK11504        246 QKWSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCL  323 (647)
T ss_pred             CCcEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCcccccccccCCCCC
Confidence            999999999999999999999999  788899999999999999999999999999999999999999999999999999


Q ss_pred             CccEEeeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCCCceeecccceEEEEEEEEEecccceEEEEEEecCcc
Q 006085          332 ANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGHVREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGS  411 (662)
Q Consensus       332 g~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGt  411 (662)
                      |+|+|||+++++++|+|++++|||||||+| +|+||||++++++..  .+||+++||||+|+|||||||||+|+|||||+
T Consensus       324 g~i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~--~v~r~r~LVvr~I~TVgNYdYi~~w~F~qdG~  400 (647)
T PRK11504        324 GEIRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSA--EVRRSRRLVISFFATVGNYDYGFYWYFYQDGT  400 (647)
T ss_pred             CCCEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcE--EEEeccEEEEEEEEecccccEEEEEEEecCce
Confidence            999999999999999999999999999999 789999999997655  23455599999999999999999999999999


Q ss_pred             EEEEEEEeEEEeeecccccccCccccCCccceecCCccccccceEEEeeeecCCCCCCCceEEEEEEEecCCCCCCCcce
Q 006085          412 IKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKS  491 (662)
Q Consensus       412 Ie~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~  491 (662)
                      ||++|+|||||+|++..     +.++.+||++|+|+++|++|||+|||||||||||.+|||+++|+++++.. ++||+++
T Consensus       401 Ie~eV~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~-~~np~g~  474 (647)
T PRK11504        401 IEFEVKLTGIVFTAAVP-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG-PDNPHGN  474 (647)
T ss_pred             EEEEEEeeeEEEeeeeC-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC-CCCccce
Confidence            99999999999986541     12356899999999999999999999999999999999999999999876 5899999


Q ss_pred             eEEEEEEEeechhhhhhcCCC-CCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCC
Q 006085          492 YWTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKK  570 (662)
Q Consensus       492 ~~~~~~~~l~tE~ea~~~~~~-~~r~~~ivN~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~  570 (662)
                      +|++++++++||++|++++++ ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+||||||+|+|
T Consensus       475 ~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d  554 (647)
T PRK11504        475 AFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDP  554 (647)
T ss_pred             EEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCcEEEeccCC
Confidence            999999999999999999999 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCcCCCCCCCChhccccCCCceeeCCcEEEEEeceecCCCCCCCCcccceeeeeEEEecCCCCCCCCCCCCCC
Q 006085          571 SEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPP  650 (662)
Q Consensus       571 ~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~  650 (662)
                      +|+||||+|+||+.+++||++|+++||+|+|||||||||||+||+||+|||||||++++||+|||+|||++||+||+||+
T Consensus       555 ~E~~aag~y~~Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~NPaldvp~s  634 (647)
T PRK11504        555 DERYAAGDYPNQSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRNPALDLPPE  634 (647)
T ss_pred             CccccCCCCcccCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCCccccCCCc
Confidence            99999999999999989999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC
Q 006085          651 KHVQRPNYT  659 (662)
Q Consensus       651 ~~~~~~~~~  659 (662)
                      .+..+|.|.
T Consensus       635 ~~~~~~~~~  643 (647)
T PRK11504        635 PPAACHEHG  643 (647)
T ss_pred             ccccccccC
Confidence            887666554

>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 0.0
1w2z_A649 Psao And Xenon Length = 649 0.0
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 6e-90
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 4e-89
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 1e-88
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 2e-88
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 2e-88
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 3e-88
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 7e-60
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 4e-59
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 4e-59
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 7e-59
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 7e-59
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 3e-58
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 3e-58
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 6e-58
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 4e-57
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 4e-57
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 3e-56
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 3e-55
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 2e-54
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 9e-54
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 4e-53
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 6e-53
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 3e-49
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 1e-35
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 5e-32
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 5e-31
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 6e-31
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 7e-31
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 2e-29
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 6e-18
1rky_A747 Pplo + Xe Length = 747 1e-17
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure 
Iteration: 1

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/641 (54%), Positives = 464/641 (72%), Gaps = 7/641 (1%)
Query: 21  RHPLDSLRPSEFTRVQTIVKTSYP--SNNLSFHYVGMDEPDKAVVYSWLSN-SKTKFPRR 77
           +HPLD L   EF  VQTIV+  YP  +N L+FHY+G+D+P+K  V  + ++ +    PR+
Sbjct: 2   QHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRK 61
Query: 78  AIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVK 137
             V+A  N QTHEI+++L  RSIVSD ++ G+GFP+L+++EQ     L L Y PF  SVK
Sbjct: 62  IFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVK 121
Query: 138 KRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDIEEMK 197
           KRGLN+S++VCS+ T+GW+GE+K+ R ++  CF   + T+N+++RPI GITIV D++ MK
Sbjct: 122 KRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCF-MKESTVNIYVRPITGITIVADLDLMK 180
Query: 198 VTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSSTR-PGFKINGNTVKWANWVF 256
           + EY+DR++  +P  E TEY++SK  PPFGP+ +S+ +   + PGF+ING++V WANW F
Sbjct: 181 IVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKF 240
Query: 257 NVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFG 316
           ++GFD R G +IS ASIYD+  HK RRVLY+G+ISELF+PYQDP+E +Y  T+FD+GEFG
Sbjct: 241 HIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFG 300
Query: 317 FGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPG 376
           FGL+ V L    DCP +A F+D Y  S +GTP+   NA+C+FE++ G++MWRHTE  +P 
Sbjct: 301 FGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPN 359
Query: 377 H-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQI 435
             + E R EV+L+VR + TVGN D +IDWEFK SGSIK  + LSG+LE+K     + D+I
Sbjct: 360 ESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEI 419
Query: 436 KEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTV 495
           KED HG LV+ NSI I HDHF  YYLD DIDG  NSFEKT L T R  + ++ RKSYWT 
Sbjct: 420 KEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTT 479
Query: 496 EKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIR 555
           E +TAKTE +A++ +   P E  +VNP+ KT +G+ VGYRL+P     P+L EDDYPQIR
Sbjct: 480 ETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIR 539
Query: 556 AGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHA 615
             FTNYNVWVT Y ++EK++GG YVD S GDDTL  WT  NREI N DIV+W+ +GIHH 
Sbjct: 540 GAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHV 599
Query: 616 PCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRP 656
           P QEDFP+MP +S  FELRPTNFFE NPVLK + P+ V  P
Sbjct: 600 PAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWP 640
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-179
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-174
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-173
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-165
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-150
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-143
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-142
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-140
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query662
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 662
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-174
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-152
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-148
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-148
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-134
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 4e-38
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 2e-29
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 9e-29
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 6e-26
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 7e-24
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 2e-23
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 3e-23
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 3e-18
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  502 bits (1293), Expect = e-174
 Identities = 253/441 (57%), Positives = 318/441 (72%), Gaps = 3/441 (0%)

Query: 219 LSKLKPPFGPRLNS-VATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDIN 277
           +SK  PPFGP+ +S  +     PGF+ING++V WANW F++GFD R G +IS ASIYD+ 
Sbjct: 1   VSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLE 60

Query: 278 MHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFM 337
            HK RRVLY+G+ISELF+PYQDP+E +Y  T+FD+GEFGFGL+ V L    DCP +A F+
Sbjct: 61  KHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFI 120

Query: 338 DGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVG 396
           D Y  S +GTP+   NA+C+FE++   +MWRHTE  +P   + E R EV+L+VR + TVG
Sbjct: 121 DTYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVG 179

Query: 397 NYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHF 456
           NYD +IDWEFK SGSIK  + LSG+LE+K     + D+IKED HG LV+ NSI I HDHF
Sbjct: 180 NYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHF 239

Query: 457 LNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPME 516
             YYLD DIDG  NSFEKT L T R  + ++ RKSYWT E +TAKTE +A++ +   P E
Sbjct: 240 YIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAE 299

Query: 517 FALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSG 576
             +VNP+ KT +G+ VGYRL+P     P+L EDDYPQIR  FTNYNVWVT Y ++EK++G
Sbjct: 300 LVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAG 359

Query: 577 GNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPT 636
           G YVD S GDDTL  WT  NREI N DIV+W+ +GIHH P QEDFP+MP +S  FELRPT
Sbjct: 360 GLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPT 419

Query: 637 NFFEYNPVLKVIPPKHVQRPN 657
           NFFE NPVLK + P+ V  P 
Sbjct: 420 NFFERNPVLKTLSPRDVAWPG 440
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query662
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.96
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.95
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.93
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.87
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.86
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.86
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.75
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.21
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 89.04
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=2.6e-144  Score=1182.30  Aligned_cols=436  Identities=58%  Similarity=1.046  Sum_probs=414.7

Q ss_pred             CCCCCCCCCCCceeec-cCCeEEEeceEEEeeceEEEEEecCCcceEEEeeEEecCCCCeEeEEEEeeeceeEEeecCCC
Q 006085          222 LKPPFGPRLNSVATSS-TRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDP  300 (662)
Q Consensus       222 ~~~~~r~~~kP~~i~q-eG~sf~v~g~~V~W~~W~f~vgf~~reGl~L~dv~~~d~~~~~~r~I~yrlsl~Em~vpYgdp  300 (662)
                      +++++|+++|||+|+| ||+||+|+|++|+||+|+|||+||+||||+||||+|+|+..+++|||+||+|||||+||||||
T Consensus         4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp   83 (441)
T d1w2za1           4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP   83 (441)
T ss_dssp             CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred             cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence            4567899999999999 999999999999999999999999999999999999998668999999999999999999999


Q ss_pred             CCcccceeeeecCCCCcccCCcCCCCCCCCCCccEEeeeEeecCCCceeEeCceEEEEEeeCCCceecccccCCCCc-ee
Q 006085          301 SEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VR  379 (662)
Q Consensus       301 ~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-~~  379 (662)
                      +++|++|+|||+||||+|.+|++|++|||||++|+|||+++++++|+|++++|||||||+| +|++|||++++.++. +.
T Consensus        84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~  162 (441)
T d1w2za1          84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE  162 (441)
T ss_dssp             STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred             CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999 779999999988776 77


Q ss_pred             ecccceEEEEEEEEEecccceEEEEEEecCccEEEEEEEeEEEeeecccccccCccccCCccceecCCccccccceEEEe
Q 006085          380 EVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNY  459 (662)
Q Consensus       380 ~~r~~~~LVvr~i~TVgNYdYi~~w~F~~DGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~  459 (662)
                      ++|++++||||+|+|||||||||+|+|||||+||+||+|||||++++......++.++..||++|+|+++|++|||+|||
T Consensus       163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~  242 (441)
T d1w2za1         163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIY  242 (441)
T ss_dssp             EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEE
T ss_pred             eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEE
Confidence            88889999999999999999999999999999999999999999876543333333457899999999999999999999


Q ss_pred             eeecCCCCCCCceEEEEEEEecCCCCCCCcceeEEEEEEEeechhhhhhcCCCCCcEEEEeCCCCCCCCCCceeEEEccC
Q 006085          460 YLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPG  539 (662)
Q Consensus       460 RlD~dIdG~~Nsv~~~d~~~~~~~~~~np~~~~~~~~~~~l~tE~ea~~~~~~~~r~~~ivN~~~~N~~G~p~gYrl~p~  539 (662)
                      ||||||||.+|||+++|+++++...+++|++..++++++++++|++|++.++.++|+|+|+|++++|++|+|+||||+|+
T Consensus       243 RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~  322 (441)
T d1w2za1         243 YLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPA  322 (441)
T ss_dssp             EEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECC
T ss_pred             EEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccC
Confidence            99999999999999999999998766777777778899999999999888877889999999999999999999999999


Q ss_pred             CcccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCcCCCCCCCChhccccCCCceeeCCcEEEEEeceecCCCCC
Q 006085          540 SIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQE  619 (662)
Q Consensus       540 ~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~HvPr~E  619 (662)
                      ++++++++++|+..+||+||+|+||||||+|+|+||+|+|++|+.++++|+.|+++||+|+|||||+|+|||+||+||+|
T Consensus       323 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~E  402 (441)
T d1w2za1         323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQE  402 (441)
T ss_dssp             SCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGG
T ss_pred             CCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccceeeeeEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 006085          620 DFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNY  658 (662)
Q Consensus       620 D~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~~~~~  658 (662)
                      ||||||++++||+|||+|||++||+||+|++++.+.|+|
T Consensus       403 D~Pvmp~~~~gf~L~P~nFF~~nPald~~~~~~~~~~~~  441 (441)
T d1w2za1         403 DFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGC  441 (441)
T ss_dssp             GSSSCCCEEEECEEEEESSSSSCTTTTCCCCCCCCTTCC
T ss_pred             hcCCcceeeeeEEEECCCCCCCCCccCCCCcccccCCCC
Confidence            999999999999999999999999999999999999998
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure