Citrus Sinensis ID: 006110

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-
MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
cccccccccccccccEEcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccccccccEEHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHccHHHHHHHHHHccccEEEEcccHHHHHccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEcHHHHHHHHHHHHHEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccEEEEEEccccccccHHHHHHHHHcccccEEEEEEEEEEEccccccccccEEEEEEccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccEEEEEEEcEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc
ccccccHHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
mlpnrqpadeqissfrlklptpELERALQLKDILERTSSLKTLLLLLVLMGTSliigdgiltPAISVMSAVsglqgeihgfgESALVIVSIIILVALFSiqrfgtgkvgfMFAPVLALWFFSLgsiglynlvKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYlmkypdsanrifydsvpdslfWPVFVLAALAAMIASQAMISATFSCIKQAMalgcfprlkiIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKiaeggwlpLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLgstlgtvrvpgIGLLYNELVQGIPSIFGqfllslpaiHSTIVFVCIkyvpvpmvrleerflfrrvgpkdyhmfrcvtrygykdvrkeDHHVFEQLLVASLEKFLRKEAQDLALERNLLesdldsvsvasrdpeasgsygteelkiplmherrfdesgtsaseettsalpssvmaldedpslEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCragaanmsvphmnilqvgmtymv
mlpnrqpadeqissfrlklptpeLERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLfrrvgpkdyhmfrCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLlesdldsvsvasrdpeasgsygteelkiplMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
MLPNRQPADEQISSFRLKLPTPELERALQLKDIlertsslktlllllvlmgtslIIGDGILTPAISVMSAVSGLQGEIHGFGEsalvivsiiilvalfsiQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVlaalaamiasqamisaTFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDesgtsaseettsalpssVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
**************************ALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLAL*********************************************************************YELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMT***
MLPNR*PADEQ********************DILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRK******************************************************************************LSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
***********ISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDS*************YGTEELKIPLMHERR*****************SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
*LP*RQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDL******************************************************************DPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query661 2.2.26 [Sep-21-2011]
Q6H4R6877 Potassium transporter 23 yes no 0.995 0.750 0.746 0.0
O80739827 Putative potassium transp yes no 0.983 0.785 0.776 0.0
Q9FY75858 Potassium transporter 7 O no no 0.992 0.764 0.557 0.0
Q8LPL8855 Potassium transporter 13 no no 0.995 0.769 0.562 0.0
Q69RI8859 Probable potassium transp no no 0.996 0.767 0.547 0.0
Q7XPL3867 Probable potassium transp no no 0.992 0.756 0.498 0.0
Q8H3P9811 Potassium transporter 7 O no no 0.978 0.797 0.454 1e-180
Q942X8783 Probable potassium transp no no 0.990 0.836 0.450 1e-177
Q9M7K4785 Potassium transporter 5 O no no 0.966 0.814 0.45 1e-172
O64769792 Potassium transporter 11 no no 0.981 0.819 0.465 1e-171
>sp|Q6H4R6|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1 Back     alignment and function desciption
 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/662 (74%), Positives = 577/662 (87%), Gaps = 4/662 (0%)

Query: 1   MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGI 60
           +LPN+Q  DE ISSFRLKLPTPELERAL +K+ LE+    K +LL LVLMGTS++IGDGI
Sbjct: 219 LLPNQQRVDEDISSFRLKLPTPELERALSVKESLEKNPVFKNILLFLVLMGTSMVIGDGI 278

Query: 61  LTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWF 120
           LTP++SVMSAVSGLQG + GFG  A+VIVSI+ LV LFS+QRFGTGKVGFMFAP+LALWF
Sbjct: 279 LTPSMSVMSAVSGLQGRVPGFGTDAVVIVSILFLVLLFSVQRFGTGKVGFMFAPILALWF 338

Query: 121 FSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLG 180
            +LG+IG+YNL KYDISVVRAFNP+YIYLFF+ NG  AWSALGGCVLCITGAEAMFADLG
Sbjct: 339 INLGTIGIYNLAKYDISVVRAFNPVYIYLFFQTNGIKAWSALGGCVLCITGAEAMFADLG 398

Query: 181 HFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240
           HFSVK+IQ+AFT VVFPCLL+AYMGQAAYLMKYP +  RIFYDSVP+ LFWPVFV+A LA
Sbjct: 399 HFSVKSIQVAFTAVVFPCLLIAYMGQAAYLMKYPFAVERIFYDSVPEILFWPVFVIATLA 458

Query: 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSI 300
           AMIASQAMISATFSCIKQAMALGCFPR+KIIHTS+K MGQIYIPV+NWFLM+MC+++V+ 
Sbjct: 459 AMIASQAMISATFSCIKQAMALGCFPRIKIIHTSKKVMGQIYIPVMNWFLMVMCIIIVAT 518

Query: 301 FQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVL 360
           F+ST DIANAYGIAEVGVM+VS+ LVT+VMLLIWQTNL LV+CFP++FGSVE +Y++AVL
Sbjct: 519 FRSTNDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLVMCFPVIFGSVEFVYLTAVL 578

Query: 361 SKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGI 420
           SKI EGGWLPLAF+S+FLC+MY WNYGSVLKY+SE+R KIS+DF+LDLGSTLGTVRVPGI
Sbjct: 579 SKIQEGGWLPLAFSSLFLCIMYTWNYGSVLKYQSEMRGKISLDFILDLGSTLGTVRVPGI 638

Query: 421 GLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 480
           GL+YNELVQGIPSIFG  L++LPA+HSTIVFVCIKYVPVP V  EERFLFRR+G KDYHM
Sbjct: 639 GLVYNELVQGIPSIFGHLLVTLPAMHSTIVFVCIKYVPVPYVPFEERFLFRRIGQKDYHM 698

Query: 481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDP 540
           FRCV RYGYKDVRKE+H  FEQLLV +LEKFLRKE+Q++ALE + +  + D VSV S  P
Sbjct: 699 FRCVARYGYKDVRKEEHGFFEQLLVETLEKFLRKESQEMALEASAMAVERDDVSVVSDIP 758

Query: 541 EASGSYGTEELKIPLMHERRF-DESGTSASEETTSALPSSVMALDEDPSLEYELSALREA 599
            +    G  +L +PL+ ++R  D + T  +E  T  LP+S ++ +EDPSLEYEL +LREA
Sbjct: 759 SSPVEAG--DLHVPLLSDQRLGDGTQTFITEGNTPVLPTSSIS-EEDPSLEYELESLREA 815

Query: 600 IDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTY 659
           I SGFTYLLAHGDVRA+K+SFF KK +INYFYAFLRRNCRAG A + VPH NI++VGMTY
Sbjct: 816 IASGFTYLLAHGDVRARKESFFTKKFIINYFYAFLRRNCRAGTATLKVPHSNIMRVGMTY 875

Query: 660 MV 661
           MV
Sbjct: 876 MV 877
High-affinity potassium transporter.
Oryza sativa subsp. japonica (taxid: 39947)
>sp|O80739|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2 Back     alignment and function description
>sp|Q9FY75|POT7_ARATH Potassium transporter 7 OS=Arabidopsis thaliana GN=POT7 PE=1 SV=2 Back     alignment and function description
>sp|Q8LPL8|POT13_ARATH Potassium transporter 13 OS=Arabidopsis thaliana GN=POT13 PE=1 SV=1 Back     alignment and function description
>sp|Q69RI8|HAK14_ORYSJ Probable potassium transporter 14 OS=Oryza sativa subsp. japonica GN=HAK14 PE=2 SV=1 Back     alignment and function description
>sp|Q7XPL3|HAK15_ORYSJ Probable potassium transporter 15 OS=Oryza sativa subsp. japonica GN=HAK15 PE=2 SV=2 Back     alignment and function description
>sp|Q8H3P9|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3 Back     alignment and function description
>sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1 Back     alignment and function description
>sp|Q9M7K4|POT5_ARATH Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1 Back     alignment and function description
>sp|O64769|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query661
224111290 847 predicted protein [Populus trichocarpa] 0.998 0.779 0.839 0.0
255587597 957 Potassium transporter, putative [Ricinus 0.990 0.684 0.824 0.0
359473336 829 PREDICTED: putative potassium transporte 0.986 0.786 0.814 0.0
449481295 838 PREDICTED: LOW QUALITY PROTEIN: putative 0.989 0.780 0.803 0.0
147771544 889 hypothetical protein VITISV_038659 [Viti 0.993 0.739 0.774 0.0
356526821 841 PREDICTED: putative potassium transporte 1.0 0.785 0.775 0.0
296086539731 unnamed protein product [Vitis vinifera] 0.947 0.856 0.800 0.0
92109214 860 potassium transporter [Phragmites austra 0.996 0.766 0.740 0.0
92109212 860 potassium transporter [Phragmites austra 0.996 0.766 0.740 0.0
18138061 837 putative potassium transporter [Vicia fa 0.995 0.786 0.776 0.0
>gi|224111290|ref|XP_002315805.1| predicted protein [Populus trichocarpa] gi|222864845|gb|EEF01976.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1144 bits (2960), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/661 (83%), Positives = 614/661 (92%), Gaps = 1/661 (0%)

Query: 1   MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGI 60
           MLPNRQPADE ISS+RLKLPTPELERAL +K+ LE+ SSLKT+LLLLVL GTS++IGDGI
Sbjct: 188 MLPNRQPADENISSYRLKLPTPELERALNIKETLEKRSSLKTVLLLLVLTGTSMVIGDGI 247

Query: 61  LTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWF 120
           LTPA+SVMSAVSGLQGEI  FG SA+V+VSIIIL+ +FSIQRFGTGKVGFMFAPVLALWF
Sbjct: 248 LTPAMSVMSAVSGLQGEISDFGTSAVVVVSIIILLGIFSIQRFGTGKVGFMFAPVLALWF 307

Query: 121 FSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLG 180
           FSLG+IG+YNLVK+DI V++A NP YIY FFKKN   AWSALGGCVLCITGAEAMFADLG
Sbjct: 308 FSLGAIGIYNLVKHDIRVLKALNPAYIYFFFKKNSSAAWSALGGCVLCITGAEAMFADLG 367

Query: 181 HFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240
           HFSV++IQIAFT VVFPCLLLAYMGQA+YLMKYPDSA+RIFYDSVP+SLFWPVFV+A LA
Sbjct: 368 HFSVQSIQIAFTCVVFPCLLLAYMGQASYLMKYPDSASRIFYDSVPESLFWPVFVIATLA 427

Query: 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSI 300
           AMIASQAMISATFSC+KQAMALGCFPRLKI+HTSRK MGQIYIP+IN+FLMIMC++VVSI
Sbjct: 428 AMIASQAMISATFSCVKQAMALGCFPRLKIVHTSRKLMGQIYIPIINYFLMIMCIIVVSI 487

Query: 301 FQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVL 360
           F+ TTDIANAYGIAEVGVM+VS+TLVT+VMLLIW+TNL L LCFPLVFGS+EL+Y+SAVL
Sbjct: 488 FRRTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWRTNLFLALCFPLVFGSIELIYLSAVL 547

Query: 361 SKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGI 420
           SKI EGGWLPLAFA+ FLCVMY WNYGSVLKY+SEVREKISMDF+L+LGSTLGTVRVPGI
Sbjct: 548 SKILEGGWLPLAFATFFLCVMYTWNYGSVLKYQSEVREKISMDFMLELGSTLGTVRVPGI 607

Query: 421 GLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 480
           GLLYNELVQG+PSIFGQFLLSLPAIHSTIVFVCIKYVPVP+V  EERFLFRRV PKDYHM
Sbjct: 608 GLLYNELVQGVPSIFGQFLLSLPAIHSTIVFVCIKYVPVPVVPQEERFLFRRVCPKDYHM 667

Query: 481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDP 540
           FRCV RYGYKDVRKE HHVFEQLLV SLEKFLR+EAQDLA+E NL E   D+VS  SRD 
Sbjct: 668 FRCVARYGYKDVRKEGHHVFEQLLVESLEKFLRREAQDLAIESNLNEY-FDNVSERSRDS 726

Query: 541 EASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAI 600
            A+G  GT+EL++PLMH+RR +++G+S SEET+SA PSSVM+LDEDPSLEYELSALREA+
Sbjct: 727 GAAGGDGTDELRVPLMHDRRLEDAGSSISEETSSAFPSSVMSLDEDPSLEYELSALREAM 786

Query: 601 DSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYM 660
           DSGFTYLLAHGDVRAKK SFF KKLVINYFYAFLR+NCRAGAANMSVPHMNILQVGMTYM
Sbjct: 787 DSGFTYLLAHGDVRAKKNSFFFKKLVINYFYAFLRKNCRAGAANMSVPHMNILQVGMTYM 846

Query: 661 V 661
           V
Sbjct: 847 V 847

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255587597|ref|XP_002534326.1| Potassium transporter, putative [Ricinus communis] gi|223525500|gb|EEF28062.1| Potassium transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359473336|ref|XP_002264951.2| PREDICTED: putative potassium transporter 12-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449481295|ref|XP_004156141.1| PREDICTED: LOW QUALITY PROTEIN: putative potassium transporter 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147771544|emb|CAN75896.1| hypothetical protein VITISV_038659 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356526821|ref|XP_003532015.1| PREDICTED: putative potassium transporter 12-like [Glycine max] Back     alignment and taxonomy information
>gi|296086539|emb|CBI32128.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|92109214|dbj|BAE93350.1| potassium transporter [Phragmites australis] Back     alignment and taxonomy information
>gi|92109212|dbj|BAE93349.1| potassium transporter [Phragmites australis] Back     alignment and taxonomy information
>gi|18138061|emb|CAD20577.1| putative potassium transporter [Vicia faba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query661
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.986 0.788 0.706 2.5e-248
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 1.0 0.773 0.516 2e-184
TAIR|locus:2184722858 KUP7 "K+ uptake permease 7" [A 0.998 0.769 0.509 1.8e-183
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.903 0.752 0.444 2.8e-144
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.989 0.821 0.418 1.1e-142
TAIR|locus:2045639712 KT1 "potassium transporter 1" 0.776 0.720 0.442 6.5e-138
TAIR|locus:2142110785 HAK5 "high affinity K+ transpo 0.966 0.814 0.409 1.1e-137
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.773 0.643 0.450 6.6e-136
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.996 0.835 0.395 8.5e-136
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.771 0.653 0.448 1.6e-134
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2392 (847.1 bits), Expect = 2.5e-248, P = 2.5e-248
 Identities = 466/660 (70%), Positives = 527/660 (79%)

Query:     2 LPNRQPADEQISSFRLKLPTPELERALQLKDIXXXXXXXXXXXXXXXXXXXXXIIGDGIL 61
             LPN+QPADEQISSFRLKLPTPELERAL +K+                      IIGDGIL
Sbjct:   176 LPNQQPADEQISSFRLKLPTPELERALGIKEALETKGYLKTLLLLLVLMGTSMIIGDGIL 235

Query:    62 TPAISVMSAVSGLQGEIHGFGEXXXXXXXXXXXXXXXXXQRFGTGKVGFMFAPVLALWFF 121
             TPA+SVMSA+SGLQGE+ GFG                  QRFGTGKVGF+FAPVLALWFF
Sbjct:   236 TPAMSVMSAMSGLQGEVKGFGTNALVMSSIVILVALFSIQRFGTGKVGFLFAPVLALWFF 295

Query:   122 SLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGH 181
             SLG+IG+YNL+KYD +V+RA NP YI LFF KN K AWSALGGCVLCITGAEAMFADLGH
Sbjct:   296 SLGAIGIYNLLKYDFTVIRALNPFYIVLFFNKNSKQAWSALGGCVLCITGAEAMFADLGH 355

Query:   182 FSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVXXXXXX 241
             FSV++IQ+AFT VVFPCLLLAYMGQAAYL K+P+++ RIFYDSVP SLFWPVFV      
Sbjct:   356 FSVRSIQMAFTCVVFPCLLLAYMGQAAYLTKHPEASARIFYDSVPKSLFWPVFVIATLAA 415

Query:   242 XXXXXXXXXXTFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIF 301
                       TFSC+KQAMALGCFPRLKIIHTS+KR+GQIYIPVINWFLMIMC++VVSIF
Sbjct:   416 MIASQAMISATFSCVKQAMALGCFPRLKIIHTSKKRIGQIYIPVINWFLMIMCILVVSIF 475

Query:   302 QSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLS 361
             +STT IANAYGIAEVGVM+VS+ LVT+VMLLIWQTN+ L LCFPL+FGSVE +Y+ AVL+
Sbjct:   476 RSTTHIANAYGIAEVGVMMVSTVLVTLVMLLIWQTNIFLALCFPLIFGSVETIYLLAVLT 535

Query:   362 KIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIG 421
             KI EGGW+PL FA+ FL VMYIWNYGSVLKY+SEVRE+ISMDF+ +LGSTLGT+R+PGIG
Sbjct:   536 KILEGGWVPLVFATFFLTVMYIWNYGSVLKYQSEVRERISMDFMRELGSTLGTIRIPGIG 595

Query:   422 LLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMF 481
             LLYNELVQGIPSIFGQFLL+LPAIHSTI+FVCIKYVPVP+V  EERFLFRRV PKDYHMF
Sbjct:   596 LLYNELVQGIPSIFGQFLLTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMF 655

Query:   482 RCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPE 541
             RC+ RYGYKDVRKED  VFEQLL+ SLEKFLR EA + ALE  L + D D VSVAS D  
Sbjct:   656 RCIARYGYKDVRKEDSRVFEQLLIESLEKFLRCEALEDALESTLNDFDPDRVSVAS-D-- 712

Query:   542 ASGSYGTEELKIPLMHERRFDXXXXXXXXXXXXXXXXXVMALDEDPSLEYELSALREAID 601
                +Y T++L  PL+H  +                     +++EDP+LEYEL+ALREA D
Sbjct:   713 ---TY-TDDLMAPLIHRAKRSEPEQELDSEVLPSSSVG-SSMEEDPALEYELAALREATD 767

Query:   602 SGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 661
             SG TYLLAHGDVRAKK S F+KKLVINYFYAFLRRNCRAGAAN++VPHMNILQ GMTYMV
Sbjct:   768 SGLTYLLAHGDVRAKKNSIFVKKLVINYFYAFLRRNCRAGAANLTVPHMNILQAGMTYMV 827
GO:0005634 "nucleus" evidence=ISM
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80739POT12_ARATHNo assigned EC number0.77640.98330.7859yesno
Q6H4R6HAK23_ORYSJNo assigned EC number0.74620.99540.7502yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_X000361
potassium ion transporter family protein (847 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query661
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-130
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 6e-96
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information 
 Score = 1253 bits (3245), Expect = 0.0
 Identities = 467/664 (70%), Positives = 555/664 (83%), Gaps = 3/664 (0%)

Query: 1   MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGI 60
           +LPN+ P+DE+ISSFRLKLPTPELER+L++K+ LE +S LK LLLLLVL GTS++IGDG+
Sbjct: 189 LLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGV 248

Query: 61  LTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWF 120
           LTPA+SVMSAVSGL+  + GFG+ A+V++S+  LV LFS+QRFGT KVGF F P LALWF
Sbjct: 249 LTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWF 308

Query: 121 FSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLG 180
            SLG IG+YNLVKYD SV RAFNP+YIY FFK+N   AWSALGGCVLC TG+EAMFADLG
Sbjct: 309 CSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLG 368

Query: 181 HFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 240
           +FSV++IQ+AFT +V PCLLLAYMGQAAYLMK PDSA +IF+ SVP SLFWPVF++A LA
Sbjct: 369 YFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLA 428

Query: 241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSI 300
           A+IAS+AM +ATFSCIKQ+MALGCFPRLKIIHTSRK MGQIYIPVINWFL++MC+VVV  
Sbjct: 429 ALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCS 488

Query: 301 FQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVL 360
           F+S TDI NAYGIAEVGVM+VS+ LVT+VMLLIWQTN+ LVLCFP+VF SVEL++ S+VL
Sbjct: 489 FRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVL 548

Query: 361 SKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGI 420
           S + +GGW+PL FASVFLC+MYIWNYGS LKY+SEVR+K+SMD + +LGS LGT+R PGI
Sbjct: 549 SSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGI 608

Query: 421 GLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 480
           GLLYNELV+GIP+IFG FL +LPAIHSTI+FVCIKYVPVP+V  EERFLFRRV PKDYHM
Sbjct: 609 GLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHM 668

Query: 481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDP 540
           FRC+ RYGYKDVRKE+H  FEQLL+ SLEKF+R+EAQ+ ALE +  +   D  SV S   
Sbjct: 669 FRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRV 728

Query: 541 EASGSYGTEELKIPLMHERR---FDESGTSASEETTSALPSSVMALDEDPSLEYELSALR 597
             + +     L +PL+ + R         S SEE +  LPSS M+ DED SLEYELS +R
Sbjct: 729 LIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYELSFIR 788

Query: 598 EAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGM 657
           EA +SG  YLL HGDVRA+K S+F+KKLVINYFYAFLR+NCR G AN+SVPH NI+QVGM
Sbjct: 789 EAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGM 848

Query: 658 TYMV 661
           TYMV
Sbjct: 849 TYMV 852

Length = 852
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 661
PLN00151852 potassium transporter; Provisional 100.0
PLN00148785 potassium transporter; Provisional 100.0
PLN00149779 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 92.72
COG0531466 PotE Amino acid transporters [Amino acid transport 86.39
TIGR00909429 2A0306 amino acid transporter. 81.4
>PLN00151 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2e-209  Score=1751.62  Aligned_cols=656  Identities=71%  Similarity=1.186  Sum_probs=589.9

Q ss_pred             CCCCCcchhhhccccccCCCChhhHHHHHHHHHHhhccchhhHHHHHHHhhhhhhhcCccccccceeeccccccccccCC
Q 006110            1 MLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHG   80 (661)
Q Consensus         1 l~~n~~~~d~~~s~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~al~~gDgviTPAiSVLSAveGl~v~~p~   80 (661)
                      ++||||++|+++|+|+++.++++++++.++|++||+|+++|++++++|++|+||+||||+||||||||||||||+++.|+
T Consensus       189 llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~  268 (852)
T PLN00151        189 LLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPG  268 (852)
T ss_pred             ccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceeehhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcceeeecChHHHHHHHHhcCcchhh
Q 006110           81 FGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS  160 (661)
Q Consensus        81 ~~~~~Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPIm~~WF~~i~~~Gi~ni~~~~p~Vl~AlnP~yai~f~~~~~~~~~~  160 (661)
                      +++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+||||+|+++||++||.+||.
T Consensus       269 l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~  348 (852)
T PLN00151        269 FGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWS  348 (852)
T ss_pred             CCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEE
Confidence            98899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccceeeeecchhhhhccCCCCCccchhhhhhhhHhHHHHHhhccchhhhccCcccccccccccccCcchHHHHHHHHHH
Q 006110          161 ALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA  240 (661)
Q Consensus       161 ~LG~VvL~vTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~L~Y~GQgA~Ll~~p~~~~npFf~~~P~~~~~P~~vlAtlA  240 (661)
                      +||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+++|+|++||+|++||+|
T Consensus       349 ~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlA  428 (852)
T PLN00151        349 ALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLA  428 (852)
T ss_pred             EecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhhhhchhhHHHHHHHhCCCcceeEEeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 006110          241 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML  320 (661)
Q Consensus       241 tIIASQA~ISg~FSl~~Qai~Lg~~Pr~~i~hTS~~~~GQIYiP~vNw~Lm~~~i~vv~~F~~s~~l~~AYGiAVt~~M~  320 (661)
                      |||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||+
T Consensus       429 aIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~  508 (852)
T PLN00151        429 ALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMM  508 (852)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhcC
Q 006110          321 VSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKI  400 (661)
Q Consensus       321 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~  400 (661)
                      +||+|+++||+.+|||+++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++++.++++
T Consensus       509 iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~v  588 (852)
T PLN00151        509 VSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKL  588 (852)
T ss_pred             HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcE
Q 006110          401 SMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM  480 (661)
Q Consensus       401 ~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lh~~vvfl~v~~~~~P~V~~~eR~~v~~~~~~~~~~  480 (661)
                      |++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++||+++++++++++|+
T Consensus       589 s~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~  668 (852)
T PLN00151        589 SMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHM  668 (852)
T ss_pred             CHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCE
Confidence            99999999888888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEeeecccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCccccccccCCCCC-CCCCCCcccccccccccc
Q 006110          481 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPE-ASGSYGTEELKIPLMHER  559 (661)
Q Consensus       481 ~r~~~ryGy~d~~~~~~~~Fe~~lv~~L~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~p~~~~~  559 (661)
                      |||++||||||..+.+++|||++|+++|++|||.|+++..++.+..+..+++.+....... .++. +..+.+.+.....
T Consensus       669 yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  747 (852)
T PLN00151        669 FRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNG-SVYSLGVPLLADY  747 (852)
T ss_pred             EEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCc-ccccccccccccc
Confidence            9999999999998634899999999999999999975321211000000000000000000 0000 0000011100000


Q ss_pred             cccc---CCCCCcccc----cccccCCCccCCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHH
Q 006110          560 RFDE---SGTSASEET----TSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYA  632 (661)
Q Consensus       560 ~~~~---e~~~~~~~~----~~~v~~~~~~~~~~~~~~~el~~L~~A~e~gvvY~lGr~~v~a~~~S~~~kKi~i~~lf~  632 (661)
                      .+..   .....+.+.    .++++    ..+.++++++|+++|++|||+|++|++||++|++|++|+++||+++|++|+
T Consensus       748 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~  823 (852)
T PLN00151        748 RLTSKPIPEASTSEEVSPVLPSSSM----SSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYA  823 (852)
T ss_pred             ccccccccccccccccccccccccc----ccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHH
Confidence            0000   000000000    01111    122246789999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccccccccCCCCEEEEeeEEEC
Q 006110          633 FLRRNCRAGAANMSVPHMNILQVGMTYMV  661 (661)
Q Consensus       633 fLrrN~r~~~~~l~IP~~rlvEvG~~~ei  661 (661)
                      |||||||++...|+|||+|++||||+|+|
T Consensus       824 fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        824 FLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             HHHHhccCcccccCCChHHeEEeceEEEC
Confidence            99999999999999999999999999997

>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00909 2A0306 amino acid transporter Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query661
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 6e-06
 Identities = 95/656 (14%), Positives = 165/656 (25%), Gaps = 235/656 (35%)

Query: 19  LPTPELERALQLKDILERTSSLKTLLL------LLVLMGTSLIIGDGILTPAISV----- 67
           L   E++  +  KD +  T  L   LL      +   +   L I    L   I       
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 68  -------MSAVSGLQGEIHGFGESALVIVSIIILV--ALFSIQR---------FGTGKVG 109
                  +     L  +   F +  +  +   + +  AL  ++           G+GK  
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK-- 163

Query: 110 FMFAPVLALWFFSLGSIGLYNLVKYDISVVRAF-NPIYIYLFFKKNGKDAWSALGGCV-- 166
                 +AL             V     V       I+            W  L  C   
Sbjct: 164 ----TWVAL------------DVCLSYKVQCKMDFKIF------------WLNLKNCNSP 195

Query: 167 ---------LCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSA 217
                    L     +  +      S        ++      LL           Y +  
Sbjct: 196 ETVLEMLQKLLYQ-IDPNWTSRSDHSSNIKLRIHSIQAELRRLLK-------SKPYENCL 247

Query: 218 NRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKR 277
             +   +V ++  W                           A  L C    KI+ T+R  
Sbjct: 248 --LVLLNVQNAKAW--------------------------NAFNLSC----KILLTTR-- 273

Query: 278 MGQIYIPVINWFLMIMCVVVVSIFQS----TTD-----IANAYGI--------AEVGVML 320
               +  V + FL       +S+       T D     +                     
Sbjct: 274 ----FKQVTD-FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 321 VSSTLVTIV--MLLIWQTNLLLVLCFPL---VFGSVELL--------YMSAVLSKIAEGG 367
             S +   +   L  W  N   V C  L   +  S+ +L        +    LS      
Sbjct: 329 RLSIIAESIRDGLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR--LSVFPPSA 385

Query: 368 WLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDF----LLDLGSTLGTVRVPGIGLL 423
            +P     + L +  IW               +        L++      T+ +P I L 
Sbjct: 386 HIP---TIL-LSL--IWFDVI-----KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE 434

Query: 424 YNELVQGIPSIFGQFLLSLPAIHSTIV--------FVCIKYVPVPM-------------- 461
               ++              A+H +IV        F     +P  +              
Sbjct: 435 LKVKLEN-----------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483

Query: 462 VRLEERF-LFRRVGPKDYHMFR------------CVTRYG----------YKDVRKEDHH 498
           +   ER  LFR V    +  FR                            YK    ++  
Sbjct: 484 IEHPERMTLFRMV----FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 499 VFEQLLVASLEKFLRKEAQDLALERNLLESD-LDSVSVASRDPEASGSYGTEELKI 553
            +E+L V ++  FL K      +E NL+ S   D + +A    +    +     ++
Sbjct: 540 KYERL-VNAILDFLPK------IEENLICSKYTDLLRIALMAED-EAIFEEAHKQV 587
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query661
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 96.28
3gia_A444 Uncharacterized protein MJ0609; membrane protein, 96.05
3l1l_A445 Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC 95.81
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
Probab=96.28  E-value=0.058  Score=58.11  Aligned_cols=99  Identities=20%  Similarity=0.162  Sum_probs=53.3

Q ss_pred             eehhHHHHHHHHHHhhhccccccccchhhH----HHHHHHHHHhhhhhhccccCccee----eecChHHHHHHHHhcCcc
Q 006110           86 LVIVSIIILVALFSIQRFGTGKVGFMFAPV----LALWFFSLGSIGLYNLVKYDISVV----RAFNPIYIYLFFKKNGKD  157 (661)
Q Consensus        86 Vv~is~~ILv~LF~iQ~~GT~kvg~~FgPI----m~~WF~~i~~~Gi~ni~~~~p~Vl----~AlnP~yai~f~~~~~~~  157 (661)
                      ...+++++++++..+--+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|..       .+..
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  202 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVG  202 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccch
Confidence            456788888888899999998777654322    122344455566665544233211    1122210       1234


Q ss_pred             hhhhccceeeeecchhhhhccCCCC--Cccchhhhh
Q 006110          158 AWSALGGCVLCITGAEAMFADLGHF--SVKAIQIAF  191 (661)
Q Consensus       158 ~~~~LG~VvL~vTG~EALyADmGHF--g~~~Ir~aw  191 (661)
                      +|..+..++.+.+|-|+.-.=-+-.  .+|.+..|=
T Consensus       203 ~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai  238 (511)
T 4djk_A          203 TLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAM  238 (511)
T ss_dssp             TTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHH
Confidence            5666777889999999764333322  234454443
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C Back     alignment and structure
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00