Citrus Sinensis ID: 006113

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660
MVPASKTIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPPS
ccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHccccccccccEEEEEEEEcccEEEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccccEEEccccccccccccccccEEEEEEEEEcccccccccccccEEEEEEccccEEEEEccccccccccccccccccccccccccccccccEEEcccccEEEEEccEEEEccEEEEEEEccccccEEEEEEEEcccccccEEEEEEEEccEEEEEcccccccccEEEEEccccccccccccccccccccccccEEEEEEEEccccccEEEccEEEEEEEEccccEEEEccccccccEEEEEEEcEEEEEEEEEEEcccccEEEEEEEEcccEEEEEEEEEEEEEEEEcccccccccccccccEEccccEEEcccEEEEEEEEEcccccccEEEEEEEEEEEcccccccccEEEEEEEEEEEcHHHHHHHccccccEEEEEcccccccccccEEEEEEEccccccccccccHHHHccccccccEEEEEEccccccccccccccccccccHHHHHccccccccccEEEEEEEccccccccccccccccEEEEEEEEccccccccccccccccc
cccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEEEccccHHHHHHHHHcHHHcccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEEEEEEcccccccccccccEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHcccccccccccEEEEccccccEEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEcccccccccccccccc
MVPASKTIFFTLLLHIFFlipshqyhpldsltpsefTQIQSIVtkaypkstynltfqyvglkeptkQTVLSWLrnetttnpprqAFVVARIDHQTHEIIVDLSLqgitskktyngygyplltgeeqedanklaSTYPLFVASISKRGLKLEEVVCGsftvgwfgeerkNKRIVKMMCYYLDgtlnadmrpiegitmtvdldemkiiqfrdriivpvpksdgteyresklkppfrpslkrttvvqpdgpsfnivgsqirwadwefHLSFDARAGMIISVASiydpekqqsrQVLYKGHVSELFVPYMDLTEEWYYRSFFdvgeygyglsslpleplrdcppnavfmdayfakndgmplkmpnVFCIFERYAGdvmwrhteatdpeklirevrpEVSLVVRTVStvgnydyindwefkqsgsiKVTVGLTGmlevrgtnythkdqieedvygtliaentigvrhdhFLTYrldldvdgdansFVKSKLrtvrvndhgsprksywtvdrETARTESAARIKlgsepvdllfvnpnkktkmgnligyrlvpygvvgpllsdddypqIRAAFTNYNAWVTAYNISekwagglyadqsrgddtlSVWSKrnrsienkDIVLWYTLgfhhvpcqedfpvmptfnggfelrpsnffesnpvlkvvpps
MVPASKTIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRnetttnppRQAFVVARIDHQTHEIIVDlslqgitskktYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCgsftvgwfgeerknkrIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKiiqfrdriivpvpksdgteyresklkppfrpslkrttvvqpdgpsfNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEatdpeklirevrpevslvvrtvstvgnydyindwefkqsgsIKVTVGLTGMLEvrgtnythkdqiEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSfvksklrtvrvndhgsprksywtvdretaRTESAariklgsepvdllfvnpnkktkmgnlIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFElrpsnffesnpvlkvvpps
MVPASKtifftlllhiffliPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPPS
******TIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPV*******************************PSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVN*******SYWTVD**********RIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFF************
**PASKTIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEY*******************QPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSD*DYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKV****
MVPASKTIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPPS
MVPASKTIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKV****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVPASKTIFFTLLLHIFFLIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPPS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query660 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.968 0.948 0.555 0.0
P49252667 Primary amine oxidase (Fr N/A no 0.972 0.962 0.548 0.0
Q8H1H9712 Primary amine oxidase OS= no no 0.957 0.887 0.489 1e-175
P46883757 Primary amine oxidase OS= N/A no 0.928 0.809 0.335 3e-94
P49250755 Primary amine oxidase OS= yes no 0.928 0.811 0.343 2e-92
P80695752 Primary amine oxidase OS= yes no 0.922 0.809 0.335 2e-90
Q07121648 Primary amine oxidase OS= N/A no 0.921 0.938 0.299 2e-75
Q07123648 Copper methylamine oxidas N/A no 0.921 0.938 0.299 2e-75
Q59118684 Histamine oxidase OS=Arth N/A no 0.928 0.896 0.301 4e-71
P46881638 Phenylethylamine oxidase N/A no 0.772 0.799 0.276 7e-53
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/641 (55%), Positives = 467/641 (72%), Gaps = 2/641 (0%)

Query: 19  LIPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETT 78
           + P H  HPLD LT  EF  +Q+IV   YP S   L F Y+GL +P K  VL +  + T 
Sbjct: 26  VTPLHVQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTL 85

Query: 79  TNPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPL 138
            + PR+ FVVA I+ QTHEI+++L ++ I S   +NGYG+P+L+ +EQ  A KL   YP 
Sbjct: 86  VSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPP 145

Query: 139 FVASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTV 198
           F+ S+ KRGL L E+VC SFT+GWFGEE KN R V++ C+  + T+N  +RPI GIT+  
Sbjct: 146 FIDSVKKRGLNLSEIVCSSFTMGWFGEE-KNVRTVRLDCFMKESTVNIYVRPITGITIVA 204

Query: 199 DLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIR 258
           DLD MKI+++ DR I  VP ++ TEY+ SK  PPF P     T  QP GP F I G  + 
Sbjct: 205 DLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVS 264

Query: 259 WADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFF 318
           WA+W+FH+ FD RAG++IS+ASIYD EK +SR+VLYKG++SELFVPY D TEE+Y+++FF
Sbjct: 265 WANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFF 324

Query: 319 DVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHT 378
           D GE+G+GLS++ L P RDCPP+A F+D Y    +G P+ + N  C+FE+Y G++MWRHT
Sbjct: 325 DSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHT 383

Query: 379 EATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNY 438
           E   P + I E R EV+L+VRT+ TVGNYD + DWEFK SGSIK ++ L+G+LE++GTN 
Sbjct: 384 ENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNI 443

Query: 439 THKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPR 498
            HKD+I+ED++G L++ N+IG+ HDHF  Y LD D+DG  NSF K+ L+TVR+ D  S R
Sbjct: 444 KHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKR 503

Query: 499 KSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDD 558
           KSYWT + +TA+TES A+I +G  P +L+ VNPN KT +GN +GYRL+P     PLL++D
Sbjct: 504 KSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTED 563

Query: 559 DYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYT 618
           DYPQIR AFTNYN WVTAYN +EKWAGGLY D SRGDDTL+VW+K+NR I NKDIV+W+ 
Sbjct: 564 DYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHV 623

Query: 619 LGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPP 659
           +G HHVP QEDFP+MP  +  FELRP+NFFE NPVLK + P
Sbjct: 624 VGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSP 664

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query660
224108047673 predicted protein [Populus trichocarpa] 0.968 0.949 0.720 0.0
224102055668 predicted protein [Populus trichocarpa] 0.995 0.983 0.691 0.0
255551473689 Amine oxidase [copper-containing] precur 0.993 0.952 0.687 0.0
225432636674 PREDICTED: primary amine oxidase [Vitis 0.963 0.943 0.685 0.0
225432644676 PREDICTED: primary amine oxidase [Vitis 0.972 0.949 0.673 0.0
449492626678 PREDICTED: LOW QUALITY PROTEIN: primary 0.987 0.961 0.645 0.0
147832635 1265 hypothetical protein VITISV_040530 [Viti 0.972 0.507 0.659 0.0
225432632667 PREDICTED: primary amine oxidase [Vitis 0.963 0.953 0.666 0.0
449444246681 PREDICTED: primary amine oxidase-like [C 0.987 0.957 0.635 0.0
147794975644 hypothetical protein VITISV_029120 [Viti 0.918 0.940 0.658 0.0
>gi|224108047|ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  972 bits (2512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/641 (72%), Positives = 532/641 (82%), Gaps = 2/641 (0%)

Query: 21  PSHQ-YHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTT 79
           P+HQ  HPLDSLTP+EF++I++IV  +YP  ++   F YVGL++P K TVLSWL++ TT 
Sbjct: 21  PTHQRQHPLDSLTPAEFSKIRAIVHSSYPIPSHTTAFHYVGLEDPNKLTVLSWLKDPTTK 80

Query: 80  NPPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLF 139
            PPRQAFV+ARI+  THEI VDL++  I S K Y+GYGYPLLT EEQ  AN L   Y  F
Sbjct: 81  TPPRQAFVIARINQTTHEITVDLTINKIVSDKLYDGYGYPLLTFEEQIAANALPLKYAPF 140

Query: 140 VASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVD 199
           + SI KRGLK+EEVVCG FTVGW+GEER+ KRIV++MCYYLDGT+NA MRP+EG+T+TVD
Sbjct: 141 LESIRKRGLKIEEVVCGGFTVGWYGEERRKKRIVRVMCYYLDGTVNAYMRPVEGVTVTVD 200

Query: 200 LDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRW 259
           L+E KII F+DR+ VP+PK DGT+YR SK  PPF   LK  T+VQPDGPSF I G +IRW
Sbjct: 201 LEETKIIGFKDRLTVPIPKGDGTDYRGSKQNPPFLAQLKGITMVQPDGPSFTIDGHRIRW 260

Query: 260 ADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFD 319
           A+W+FHLSFD+RAG IIS+ASI+D +KQ+ RQVLYKG VSELFVPYMDLTEEWYYR+FFD
Sbjct: 261 ANWDFHLSFDSRAGPIISLASIFDLQKQKFRQVLYKGFVSELFVPYMDLTEEWYYRTFFD 320

Query: 320 VGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTE 379
            GEYGYGL ++PLEP RDCP NAVFMDAYFA  +GMP+ MP+VFCIFE+YAGD+ WRHTE
Sbjct: 321 AGEYGYGLCAVPLEPFRDCPENAVFMDAYFAGQNGMPVNMPDVFCIFEKYAGDITWRHTE 380

Query: 380 ATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYT 439
              P + IREVRPEV+LVVR VSTVGNYDYINDWEFKQSGSIKVTVGLTG+LEVRG+ YT
Sbjct: 381 TLKPGEEIREVRPEVTLVVRMVSTVGNYDYINDWEFKQSGSIKVTVGLTGLLEVRGSVYT 440

Query: 440 HKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRK 499
           H DQI+E+VYGTL+AENT+G  HDHFLTY LDLDVDGDANS VKS L+  RV D  SPRK
Sbjct: 441 HNDQIKEEVYGTLLAENTVGAHHDHFLTYHLDLDVDGDANSLVKSNLQMTRVADQMSPRK 500

Query: 500 SYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDD 559
           SYW V  ETA+TES ARI+LG E  DLL VNPNK+T +GN IGYRL+P  +  P+LSDDD
Sbjct: 501 SYWRVVSETAKTESDARIRLGVEQADLLVVNPNKRTDLGNSIGYRLIPGSLTHPVLSDDD 560

Query: 560 YPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTL 619
           Y QIR AFT YN WVT YN SEKWAGGLYADQSRGDDTL+ WS RNR IENKDIVLWYTL
Sbjct: 561 YSQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGDDTLARWSLRNRGIENKDIVLWYTL 620

Query: 620 GFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKV-VPP 659
           GFHHVP QEDFPVMPT + GFELRP+NFFESNPVLKV +PP
Sbjct: 621 GFHHVPYQEDFPVMPTISSGFELRPANFFESNPVLKVKLPP 661

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224102055|ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551473|ref|XP_002516782.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543870|gb|EEF45396.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432644|ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737038|emb|CBI26239.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449492626|ref|XP_004159052.1| PREDICTED: LOW QUALITY PROTEIN: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147832635|emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444246|ref|XP_004139886.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query660
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.957 0.933 0.586 6.5e-209
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.959 0.929 0.560 5.2e-207
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.965 0.945 0.557 2.7e-203
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.928 0.827 0.569 1.6e-196
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.939 0.953 0.537 8.8e-189
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.957 0.887 0.489 3.9e-163
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.954 0.850 0.482 1e-162
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.957 0.919 0.480 5.9e-160
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.928 0.809 0.339 1.1e-92
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.416 0.916 0.551 4.5e-82
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2020 (716.1 bits), Expect = 6.5e-209, P = 6.5e-209
 Identities = 374/638 (58%), Positives = 470/638 (73%)

Query:    26 HPLDSLTPSEFTQIQSIVTKAYPKS-TYNLTFQYVGLKEPTKQTVLSWLRN--ETTTNPP 82
             HP D LT +E   +++I+ K+YP    +  TFQYVGL EP K  VLSW  +       PP
Sbjct:    27 HPFDPLTETELKLVRNIINKSYPIGHNHKFTFQYVGLNEPEKSLVLSWHSSPDRNVKPPP 86

Query:    83 RQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVAS 142
             RQAFV+AR    + EI++D S + I S K + G G P+LT +EQ+ A  +   Y  F  S
Sbjct:    87 RQAFVIARDKGMSREIVIDFSTRAIVSNKIHVGNGNPMLTIDEQQAATAVVQKYKPFCDS 146

Query:   143 ISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDE 202
             I KRGL L EVV  S T+GWFGE  K KR ++ + +YL+G++N  +RPIEG+T+ V+LD+
Sbjct:   147 IIKRGLNLSEVVVTSSTMGWFGET-KTKRFIRTIPFYLNGSVNTYLRPIEGMTIIVNLDQ 205

Query:   203 MKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADW 262
             MK+  F+DR   P+PK++G EYR SKLKPPF PSL+   V QPDGP F I G  +RWA+W
Sbjct:   206 MKVTGFKDRFTGPMPKANGREYRISKLKPPFGPSLRSAVVFQPDGPGFKIDGHVVRWANW 265

Query:   263 EFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGE 322
             EFH+SFD RAG++IS+ASI+D +  + RQVLYKGH+SE+FVPYMD  ++WY+ S+ D GE
Sbjct:   266 EFHMSFDVRAGLVISLASIFDMDMNRYRQVLYKGHLSEMFVPYMDPNDDWYFISYLDCGE 325

Query:   323 YGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATD 382
             +G G +++ LEP  DCPPNA FMD  F   DG P K+ NV CIFE+YAGD+MWRHTEA  
Sbjct:   326 FGCGQTAVSLEPYTDCPPNAAFMDGIFPGQDGTPTKISNVMCIFEKYAGDIMWRHTEAEV 385

Query:   383 PEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKD 442
             P   I EVRP+VSLV R V+TVGNYDYI ++EFK SGSIK+ VGLTG+LEV+   Y H  
Sbjct:   386 PGLKITEVRPDVSLVARMVTTVGNYDYIIEYEFKPSGSIKMGVGLTGVLEVKPVEYVHTS 445

Query:   443 QI-EEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRV-NDHGSPRKS 500
             +I E+D+YGT++A+NT+GV HDHF+T+RLDLD+DG  NSFV+++L T R      +PRKS
Sbjct:   446 EIKEDDIYGTIVADNTVGVNHDHFVTFRLDLDIDGTENSFVRTELVTKRTPKSVNTPRKS 505

Query:   501 YWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDY 560
             YWT  R TA+TE+ AR+KLG    +L+ VNP KKTK GN +GYRL+P     PLL  DDY
Sbjct:   506 YWTTKRNTAKTEADARVKLGLRAEELVVVNPTKKTKHGNEVGYRLLPGPASSPLLVQDDY 565

Query:   561 PQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLG 620
             PQIRAAFTNYN W+T YN SE WA GLYAD+S+GDDTL+VWS+R+R IENKDIV+WYT+G
Sbjct:   566 PQIRAAFTNYNVWITPYNKSEVWASGLYADRSQGDDTLAVWSQRDREIENKDIVMWYTVG 625

Query:   621 FHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVP 658
             FHHVPCQEDFP MPT  GGFELRP+NFFE NPVLK  P
Sbjct:   626 FHHVPCQEDFPTMPTMFGGFELRPTNFFEQNPVLKAKP 663
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49252AMO_LENCU1, ., 4, ., 3, ., 2, 10.54810.97270.9625N/Ano
P80695AMO_KLEOK1, ., 4, ., 3, ., 2, 10.33530.92270.8098yesno
P49250AMO_ENTAE1, ., 4, ., 3, ., 2, 10.34370.92870.8119yesno
Q43077AMO_PEA1, ., 4, ., 3, ., 2, 10.55530.96810.9480N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.946
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.X.5919.1
hypothetical protein (632 aa)
(Populus trichocarpa)
Predicted Functional Partners:
KNOX3
SubName- Full=KNOX3; Flags- Fragment; (369 aa)
      • 0.510
TUB2
tubulin, beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GT [...] (442 aa)
      • 0.507

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query660
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 1e-180
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-165
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-152
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-126
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 4e-24
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 5e-18
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  853 bits (2206), Expect = 0.0
 Identities = 370/635 (58%), Positives = 472/635 (74%), Gaps = 13/635 (2%)

Query: 25  YHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLR--NETTTNPP 82
           YHPLD L P E  +I+ IV K++  +  NLTF ++ L+EP K+ VL WL       + PP
Sbjct: 21  YHPLDPLNPQEINKIRLIVQKSHLGNLPNLTFHFLDLEEPEKRDVLKWLSSNPSNKSPPP 80

Query: 83  RQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVAS 142
           R+A VV R   +T+E+IVDL+   ITS + Y G+GYP LT  E   A+KL   YP F  S
Sbjct: 81  RRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLTFIELFQASKLPLKYPKFKKS 140

Query: 143 ISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDLDE 202
           I +RGL + EV C  FTVGW+GE    KR +K+ C+Y  G++N   RPIEGI++ +D+D 
Sbjct: 141 ILRRGLNISEVSCIPFTVGWYGET-VTKRALKISCFYRGGSVNVFARPIEGISILIDVDS 199

Query: 203 MKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADW 262
           M+II++ DR   P+PK++GT++R       F  ++  +         F I+G +++WA+W
Sbjct: 200 MQIIKYSDRFRAPLPKAEGTDFRTKHKPFSFPCNVSDS--------GFTILGHRVKWANW 251

Query: 263 EFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGE 322
           +FH+ FDARAG+ IS AS++D + ++ R+VLY+GHVSE FVPYMD T EWY+R+F D+GE
Sbjct: 252 DFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFVPYMDPTSEWYFRTFMDIGE 311

Query: 323 YGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATD 382
           +G+G S++ L+PL DCP NAV++D Y A  DG   KM NV CIFERY+GDV +RHTE   
Sbjct: 312 FGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVICIFERYSGDVAFRHTEINV 371

Query: 383 PEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKD 442
           P ++IR   PE+SLVVR V+T+GNYDYI DWEFK+SGSIKV V LTG+LE++ T+YT+ D
Sbjct: 372 PGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKSGSIKVGVDLTGVLEMKATSYTNND 431

Query: 443 QIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHG--SPRKS 500
           QI +DVYGTL+AENTI V HDHFLTY LDLDVDG+ NSFVK+KL+T RV      SPRKS
Sbjct: 432 QITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVKAKLQTARVTAVNASSPRKS 491

Query: 501 YWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDY 560
           YWTV +ETA+TE+  RI+LGSEP +LL VNPNKKTK+GN +GYRL+    V  LLSDDDY
Sbjct: 492 YWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTKLGNQVGYRLITGQPVTSLLSDDDY 551

Query: 561 PQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLG 620
           PQIRAA+T Y  WVTAYN SE+WAGG YAD+SRGDD L+VWS RNR IENKDIVLWYT+G
Sbjct: 552 PQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVWSSRNREIENKDIVLWYTVG 611

Query: 621 FHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLK 655
           FHH+P QEDFPVMPT +GGFELRP+NFFESNP+L+
Sbjct: 612 FHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 660
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.91
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.77
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-192  Score=1610.61  Aligned_cols=621  Identities=34%  Similarity=0.592  Sum_probs=586.1

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCceEEEEEEccCCChHhhHhhhhcCCCCCCCCEeEEEEEe--CCeeEE
Q 006113           20 IPSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTNPPRQAFVVARI--DHQTHE   97 (660)
Q Consensus        20 ~~~~~~HPLdpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~I~L~EP~K~~vl~~l~~~~~~~p~R~A~vv~~~--~~~~~E   97 (660)
                      .+....|||||||++||++|++|||++.+.+ ..++|.+|+|.||+|++|++|+.++   +++|+|+|++++  ++.++|
T Consensus         8 ~~~~~~HPLdpLt~~Ei~~a~~iv~~~~~~~-~~~~F~~i~L~EP~K~~v~~~~~g~---~~~R~a~v~~~~~~~~~~~e   83 (647)
T PRK11504          8 TAAAVSHPLDPLTAAEIEAAVAILRAEGLLG-ESTRFVSIELAEPPKAEVLAFDPGD---PIDRRAFVVLYDRATGKTYE   83 (647)
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHHHHhccccC-CceEEEEeeccCCCHHHHHhhhcCC---CCCcEEEEEEEECCCCcEEE
Confidence            3444569999999999999999999987543 5789999999999999999999875   247999999996  577999


Q ss_pred             EEEECCCCeEEEEeeeCCCCCCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCC-CCceeEEEE
Q 006113           98 IIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFVASISKRGL-KLEEVVCGSFTVGWFGEE-RKNKRIVKM  175 (660)
Q Consensus        98 ~iV~L~~~~v~~~~~~~~~~~p~~~~eE~~~~e~~~~~~p~~~~a~~~~Gi-~~~~v~~d~w~~G~~~~~-~~~rRl~~~  175 (660)
                      ++|||++++|++++.++ ++||+++.||+.+|+++|++||+|++||+|||| ++++|+||||++||++.+ +.+|||+||
T Consensus        84 ~vVdL~~~~V~~~~~~~-~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~~~Rl~~~  162 (647)
T PRK11504         84 AVVSLTAGEVVSWEEIP-GVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEERGRRLARG  162 (647)
T ss_pred             EEEECCCCEEEEEEECC-CccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcCCceEEEE
Confidence            99999999999999997 479999999999999999999999999999999 578999999999998876 336999999


Q ss_pred             EEEEec-CCCCcccccCCCeEEEEeCCCcEEEEEeCCceeeCCCCCCCCCccCcCCCCCCCCCCCceeeCCCCCeeEEec
Q 006113          176 MCYYLD-GTLNADMRPIEGITMTVDLDEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVG  254 (660)
Q Consensus       176 ~~~~r~-~~~n~YahPl~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~g  254 (660)
                      +||+|. +++|+||||||||.++||++++||++|+|.+.+|+|+.. .+|+++.+. ++|+++|||+|+||||+||+|+|
T Consensus       163 ~~~~r~~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v~g  240 (647)
T PRK11504        163 LAFVRADPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTVDG  240 (647)
T ss_pred             EEEEecCCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEEcC
Confidence            999994 888999999999999999999999999999888888776 499988765 68999999999999999999999


Q ss_pred             cEEeeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCCCcccccceeeecCCCCCCcCCCCCCC
Q 006113          255 SQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEP  334 (660)
Q Consensus       255 ~~V~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp~~~~~~k~~fD~geyG~G~~a~~L~~  334 (660)
                      ++|+||||+||+|||+|||||||||+|+|  .|++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|++
T Consensus       241 ~~V~W~~W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L~l  318 (647)
T PRK11504        241 NEVEWQKWSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLEL  318 (647)
T ss_pred             CEEEECCcEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCccccccccc
Confidence            99999999999999999999999999999  6788999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCCcceEeeeeeceEEEEEEeeeeccccceEEEE
Q 006113          335 LRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWE  414 (660)
Q Consensus       335 G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdY~~~w~  414 (660)
                      ||||||+|+|||+++.+++|+|++++|||||||+| +|+||||++++++.+++   ||+++||||+|+|||||||+|+|+
T Consensus       319 GcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~~v---~r~r~LVvr~I~TVgNYdYi~~w~  394 (647)
T PRK11504        319 GCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSAEV---RRSRRLVISFFATVGNYDYGFYWY  394 (647)
T ss_pred             CCCCCCCCEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcEEE---EeccEEEEEEEEecccccEEEEEE
Confidence            99999999999999999999999999999999999 78999999999876554   455599999999999999999999


Q ss_pred             EeeCccEEEEEeEeeeeeeeeccccCCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEeecCCC
Q 006113          415 FKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDH  494 (660)
Q Consensus       415 F~~DGtIe~ev~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~RlD~dIdG~~Nsv~~~d~v~~~~~~~  494 (660)
                      |||||+||+||+|||||+++++.     ++.+.+||++|+|+++|++|||+|||||||||||.+|||++.|++++|++ +
T Consensus       395 F~qdG~Ie~eV~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~-~  468 (647)
T PRK11504        395 FYQDGTIEFEVKLTGIVFTAAVP-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG-P  468 (647)
T ss_pred             EecCceEEEEEEeeeEEEeeeeC-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC-C
Confidence            99999999999999999987652     22346899999999999999999999999999999999999999999886 5


Q ss_pred             CCCcceeEEEEEEEeechhhHhhhcCC-CCcEEEEecCCCCCCCCCceeEEEeeCCCcCcCCCCCChhhhcccccccceE
Q 006113          495 GSPRKSYWTVDRETARTESAARIKLGS-EPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAW  573 (660)
Q Consensus       495 ~np~~~~~~~~~~~l~tE~~a~~~~~~-~~r~~~ivN~~~~N~~G~p~gY~l~p~~~~~~~~~~~s~~~~ra~fa~~~lw  573 (660)
                      +||++|+|++++++++||++|++++++ ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+||||
T Consensus       469 ~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lw  548 (647)
T PRK11504        469 DNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLW  548 (647)
T ss_pred             CCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCcEE
Confidence            899999999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             EeeecCCccCCCCcCCCCCCCCCChhhhccCCCceecCCeEEEEEecceeCCCCCCCCCcccccceeEEEeCCCCCCCCC
Q 006113          574 VTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSNFFESNPV  653 (660)
Q Consensus       574 VT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~  653 (660)
                      ||+|+|+|+||||+|+||+.+++||++|+++||+|+|||||+|||||+||+||+|||||||++++||+|||+|||++||+
T Consensus       549 VT~y~d~E~~aag~y~~Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~NPa  628 (647)
T PRK11504        549 VTPYDPDERYAAGDYPNQSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRNPA  628 (647)
T ss_pred             EeccCCCccccCCCCcccCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCCcc
Confidence            99999999999999999999989999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q 006113          654 LKVVPP  659 (660)
Q Consensus       654 ldvP~~  659 (660)
                      ||||++
T Consensus       629 ldvp~s  634 (647)
T PRK11504        629 LDLPPE  634 (647)
T ss_pred             ccCCCc
Confidence            999986

>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query660
1w2z_A649 Psao And Xenon Length = 649 0.0
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 0.0
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 3e-95
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 2e-94
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 5e-94
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 6e-94
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 7e-94
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 2e-93
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 1e-57
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 2e-54
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 5e-54
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 7e-54
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 1e-53
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 3e-53
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 4e-53
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 4e-53
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 6e-53
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 2e-52
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 3e-52
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 4e-52
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 5e-52
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 3e-51
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 2e-50
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 2e-50
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 3e-50
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 4e-37
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 1e-31
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 1e-30
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 2e-30
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 2e-30
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 3e-28
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 9e-22
1rky_A747 Pplo + Xe Length = 747 2e-21
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/639 (55%), Positives = 465/639 (72%), Gaps = 2/639 (0%)
Query: 21  PSHQYHPLDSLTPSEFTQIQSIVTKAYPKSTYNLTFQYVGLKEPTKQTVLSWLRNETTTN 80
           P H  HPLD LT  EF  +Q+IV   YP S   L F Y+GL +P K  VL +  + T  +
Sbjct: 3   PLHVQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVS 62
Query: 81  PPRQAFVVARIDHQTHEIIVDLSLQGITSKKTYNGYGYPLLTGEEQEDANKLASTYPLFV 140
            PR+ FVVA I+ QTHEI+++L ++ I S   +NGYG+P+L+ +EQ  A KL   YP F+
Sbjct: 63  IPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFI 122
Query: 141 ASISKRGLKLEEVVCGSFTVGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDL 200
            S+ KRGL L E+VC SFT+GWFGEE KN R V++ C+  + T+N  +RPI GIT+  DL
Sbjct: 123 DSVKKRGLNLSEIVCSSFTMGWFGEE-KNVRTVRLDCFMKESTVNIYVRPITGITIVADL 181
Query: 201 DEMKIIQFRDRIIVPVPKSDGTEYRESKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWA 260
           D MKI+++ DR I  VP ++ TEY+ SK  PPF P     T  QP GP F I G  + WA
Sbjct: 182 DLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWA 241
Query: 261 DWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDV 320
           +W+FH+ FD RAG++IS+ASIYD EK +SR+VLYKG++SELFVPY D TEE+Y+++FFD 
Sbjct: 242 NWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDS 301
Query: 321 GEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEA 380
           GE+G+GLS++ L P RDCPP+A F+D Y    +G P+ + N  C+FE+Y G++MWRHTE 
Sbjct: 302 GEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTEN 360
Query: 381 TDPEKLIREVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTH 440
             P + I E R EV+L+VRT+ TVGN D + DWEFK SGSIK ++ L+G+LE++GTN  H
Sbjct: 361 GIPNESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKGTNIKH 420
Query: 441 KDQIEEDVYGTLIAENTIGVRHDHFLTYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKS 500
           KD+I+ED++G L++ N+IG+ HDHF  Y LD D+DG  NSF K+ L+TVR+ D  S RKS
Sbjct: 421 KDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKS 480
Query: 501 YWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDY 560
           YWT + +TA+TES A+I +G  P +L+ VNPN KT +GN +GYRL+P     PLL++DDY
Sbjct: 481 YWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDY 540
Query: 561 PQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLG 620
           PQIR AFTNYN WVTAYN +EKWAGGLY D SRGDDTL+VW+K+NR I NKDIV+W+ +G
Sbjct: 541 PQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVG 600
Query: 621 FHHVPCQEDFPVMPTFNGGFELRPSNFFESNPVLKVVPP 659
            HHVP QEDFP+MP  +  FELRP+NFFE NPVLK + P
Sbjct: 601 IHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSP 639
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query660
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-180
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-180
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-171
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-168
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-149
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-142
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-142
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-141
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query660
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 660
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-180
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-156
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-156
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-153
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-139
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 3e-39
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 1e-30
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 2e-27
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1e-26
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1e-24
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1e-20
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 2e-20
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 3e-17
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  516 bits (1331), Expect = e-180
 Identities = 255/434 (58%), Positives = 328/434 (75%), Gaps = 1/434 (0%)

Query: 227 SKLKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEK 286
           SK  PPF P     T  QP GP F I G  + WA+W+FH+ FD RAG++IS+ASIYD EK
Sbjct: 2   SKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEK 61

Query: 287 QQSRQVLYKGHVSELFVPYMDLTEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMD 346
            +SR+VLYKG++SELFVPY D TEE+Y+++FFD GE+G+GLS++ L P RDCPP+A F+D
Sbjct: 62  HKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFID 121

Query: 347 AYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIREVRPEVSLVVRTVSTVGN 406
            Y    +G P+ + N  C+FE+Y   +MWRHTE   P + I E R EV+L+VRT+ TVGN
Sbjct: 122 TYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVGN 180

Query: 407 YDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFL 466
           YD + DWEFK SGSIK ++ L+G+LE++GTN  HKD+I+ED++G L++ N+IG+ HDHF 
Sbjct: 181 YDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFY 240

Query: 467 TYRLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDL 526
            Y LD D+DG  NSF K+ L+TVR+ D  S RKSYWT + +TA+TES A+I +G  P +L
Sbjct: 241 IYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAEL 300

Query: 527 LFVNPNKKTKMGNLIGYRLVPYGVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGG 586
           + VNPN KT +GN +GYRL+P     PLL++DDYPQIR AFTNYN WVTAYN +EKWAGG
Sbjct: 301 VVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGG 360

Query: 587 LYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQEDFPVMPTFNGGFELRPSN 646
           LY D SRGDDTL+VW+K+NR I NKDIV+W+ +G HHVP QEDFP+MP  +  FELRP+N
Sbjct: 361 LYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTN 420

Query: 647 FFESNPVLKVVPPS 660
           FFE NPVLK + P 
Sbjct: 421 FFERNPVLKTLSPR 434
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query660
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.97
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.95
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.95
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.94
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.87
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.87
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.86
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.75
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.23
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 89.93
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=2.4e-145  Score=1190.31  Aligned_cols=430  Identities=59%  Similarity=1.098  Sum_probs=407.9

Q ss_pred             CCCCCCCCCCCceeeCCCCCeeEEeccEEeeeceEEEEeecCCCceeEEeeEEeCCCCCcceEEEEeeeeeeEEeecCCC
Q 006113          229 LKPPFRPSLKRTTVVQPDGPSFNIVGSQIRWADWEFHLSFDARAGMIISVASIYDPEKQQSRQVLYKGHVSELFVPYMDL  308 (660)
Q Consensus       229 ~~~~~r~~lkp~~i~QPeG~sf~v~g~~V~W~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~I~yrlsl~Em~vpYgdp  308 (660)
                      ++|++|+++|||+|+||||+||+|+|++|+||+|+|||+||+|||||||||+|+|+..+++|||+||+|||||+||||||
T Consensus         4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp   83 (441)
T d1w2za1           4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP   83 (441)
T ss_dssp             CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred             cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence            45778999999999999999999999999999999999999999999999999998557889999999999999999999


Q ss_pred             CcccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeEEecCCCceeEecceEEEeEeeCCCceeccccCCCCcceEe
Q 006113          309 TEEWYYRSFFDVGEYGYGLSSLPLEPLRDCPPNAVFMDAYFAKNDGMPLKMPNVFCIFERYAGDVMWRHTEATDPEKLIR  388 (660)
Q Consensus       309 ~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~  388 (660)
                      +++|++|+|||+||||+|.+|++|++||||||+|+|||+++.+++|+|++++|||||||+| +|++|||++++.++..+.
T Consensus        84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~  162 (441)
T d1w2za1          84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE  162 (441)
T ss_dssp             STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred             CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999 789999999998888888


Q ss_pred             eeeeceEEEEEEeeeeccccceEEEEEeeCccEEEEEeEeeeeeeeeccccCCCCcccccccceeccCcccccceeeEEe
Q 006113          389 EVRPEVSLVVRTVSTVGNYDYINDWEFKQSGSIKVTVGLTGMLEVRGTNYTHKDQIEEDVYGTLIAENTIGVRHDHFLTY  468 (660)
Q Consensus       389 ~~r~~~~LVvr~i~TVgNYdY~~~w~F~~DGtIe~ev~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~~~~HqH~f~~  468 (660)
                      ++|++++||||+|+|||||||+|+|+|||||+||+||||||||+++++.....++.++..||++|+|+++|++|||+|||
T Consensus       163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~  242 (441)
T d1w2za1         163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIY  242 (441)
T ss_dssp             EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEE
T ss_pred             eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEE
Confidence            99999999999999999999999999999999999999999999876643333333456799999999999999999999


Q ss_pred             eeecCCCCCCCceEEEEEEEeecCCCCCCcceeEEEEEEEeechhhHhhhcCCCCcEEEEecCCCCCCCCCceeEEEeeC
Q 006113          469 RLDLDVDGDANSFVKSKLRTVRVNDHGSPRKSYWTVDRETARTESAARIKLGSEPVDLLFVNPNKKTKMGNLIGYRLVPY  548 (660)
Q Consensus       469 RlD~dIdG~~Nsv~~~d~v~~~~~~~~np~~~~~~~~~~~l~tE~~a~~~~~~~~r~~~ivN~~~~N~~G~p~gY~l~p~  548 (660)
                      ||||||||.+|||++.|+++++++.+++|++..++++++++++|++|+..++.++|+|+|+|++++|++|+|+||||+|+
T Consensus       243 RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~  322 (441)
T d1w2za1         243 YLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPA  322 (441)
T ss_dssp             EEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECC
T ss_pred             EEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccC
Confidence            99999999999999999999998665666666677888899999999888877889999999999999999999999999


Q ss_pred             CCcCcCCCCCChhhhcccccccceEEeeecCCccCCCCcCCCCCCCCCChhhhccCCCceecCCeEEEEEecceeCCCCC
Q 006113          549 GVVGPLLSDDDYPQIRAAFTNYNAWVTAYNISEKWAGGLYADQSRGDDTLSVWSKRNRSIENKDIVLWYTLGFHHVPCQE  628 (660)
Q Consensus       549 ~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DlV~W~t~G~~HvPr~E  628 (660)
                      +++++++.++|+..+||+||+|+||||||+|+|+||||+|++|++++++|+.|+++||+|+|||||+|+|||+||+||+|
T Consensus       323 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~E  402 (441)
T d1w2za1         323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQE  402 (441)
T ss_dssp             SCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGG
T ss_pred             CCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccceeEEEeCCCCCCCCCCCCCCC
Q 006113          629 DFPVMPTFNGGFELRPSNFFESNPVLKVVPP  659 (660)
Q Consensus       629 D~Pvmp~~~~~f~L~P~nFFd~nP~ldvP~~  659 (660)
                      ||||||++++||+|||+|||++||+||+|++
T Consensus       403 D~Pvmp~~~~gf~L~P~nFF~~nPald~~~~  433 (441)
T d1w2za1         403 DFPIMPLLSTSFELRPTNFFERNPVLKTLSP  433 (441)
T ss_dssp             GSSSCCCEEEECEEEEESSSSSCTTTTCCCC
T ss_pred             hcCCcceeeeeEEEECCCCCCCCCccCCCCc
Confidence            9999999999999999999999999999987
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure