Citrus Sinensis ID: 006131

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660

MNTSSCIGISTMKPCCRILIGYRISSIFGVSHIRSNHKIVNNSSKLHSKSKLSCYNDAKCKVIGHKKGVIDLNRRAFFASGSNWGESKILGKNKLGVNKDSSRGILVIPHVASDFRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIENGNEVVKEDGSRVQVNGSGVNLDILKDLNENVETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTGRKKCLRFAARSQICV

ccccccEEEccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccEEEEcccccccccEEEccccccccccccEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEccccccccccEEEccccccccccccccccccHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHcccccccccccHHHHHccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccHHHccccccccccc

cccccEEEEcccccccEEEEEccccccccccccccccEcccccccccccccccEccccccccccEEEEEEccccccEEcccccccccEEEEcccccccccccccEEEEEcccHHHccccccEEEEEccccccEEEEEccccccEEEEEEcccEEEcccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHEEccccEEEEEEccccccccccccHEEHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcHccccccccccccEEEEEEcccccccccccEEEcccccHHHEcccccccHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHcccccHHcccccccccccHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccEccHHHHHHHHHHHHHHHHHHHHHHccHHccEEEccccHHHHHHHHHHHccccccccccHHcccEEEc

mntsscigistmkpcCRILIGYRISSIFGVshirsnhkivnnssklhsksklscyndakckvighkkgviDLNRRAffasgsnwgeskilgknklgvnkdssrgilviphvasdfrnhstsidshvnekgFESIYiqgglnvkplviengnevvkedgsrvqvngsgvnLDILKDLnenveteseaSNIEKEAWKLLRDAVVNYcgnpvgtvaannpadkqplnydqvfIRDFVPSALAFLLNGEGDIVKNFLLHTLQlqswektvdcyspgqglmpasfkvrtvpldggdgtleevldpdfgesaigrvapvdsgLWWIILLRAYGKitgdyalqerVDVQTGIRLILNLCltdgfdmfpsllvtdgscmidrrmgihghpLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAInkfniypdqipswlvdwipneggylignlepghmdfrFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAhmplkicypaldpwsyhnggswptLLWQFTLACIKMGRPELAQKAVAMAEKRlsvdqwpeyydtqsgrfigkqsrLHQTWTIAGYLTSkmllenpakaslLFWEEDYELLENCVCALSKTGRKKCLRFAARSQICV

mntsscigistMKPCCRILIGYRISSIFGVSHIRSNHKivnnssklhsksKLSCYNDAKCKVIGHKKGVIDLNRRAFFasgsnwgeskilgknklgvnkdsSRGILVIPHVASDFRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIENGNEvvkedgsrvqvngsgvnldILKDLNENVETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEevldpdfgesaigrvapvdsglWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSgrfigkqsrlHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTGRKKCLRFAARSQICV

MNTSSCIGISTMKPCCRILIGYRISSIFGVSHIRSNHKIVNNssklhsksklsCYNDAKCKVIGHKKGVIDLNRRAFFASGSNWGESKILGKNKLGVNKDSSRGILVIPHVASDFRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIENGNEVVKEDGSRVQVNGSGVNLDILKDLNENVETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTGRKKCLRFAARSQICV

*****CIGISTMKPCCRILIGYRISSIFGVSHIRSNHKIVNN***L**KSKLSCYNDAKCKVIGHKKGVIDLNRRAFFASGSNWGESKILGKNKLGVNKDSSRGILVIPHVASDFRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIENGNEVVKEDGSRVQVNGSGVNLDILKDL************IEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTGRKKCLRFAAR*****

****SC*GISTMKPCCRILIGYRISSIFGVSHI***************KSKLSCYNDAKCKVIGHKKGVIDLNRRAFFA*******************************VASDFRNHSTSID*********************************************************************AWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENC******************SQICV

MNTSSCIGISTMKPCCRILIGYRISSIFGVSHIRSNHKIVNNSSKLHSKSKLSCYNDAKCKVIGHKKGVIDLNRRAFFASGSNWGESKILGKNKLGVNKDSSRGILVIPHVASDFRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIENGNEVVKEDGSRVQVNGSGVNLDILKDLNEN*********IEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTGRKKCLRFAARSQICV

**TSSCIGISTMKPCCRILIGYRISSIFGVSHIRSNHKIVNNSSKLHSKSKLSCYNDAKCKVIGHKKGVIDLNRRAFFASGSNWGESKILGKNKLGVNKDSSRGILVIPHVASDFRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIENGNEVVKEDGSRVQVNGS********************SNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALDPWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKT****C***********

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		660
255556486		686	beta-fructofuranosidase, putative [Ricin	0.993	0.956	0.788	0.0
347949208		685	neutral/alkaline invertase [Manihot escu	0.992	0.956	0.773	0.0
147773544		673	hypothetical protein VITISV_029106 [Viti	0.993	0.974	0.775	0.0
225432057		673	PREDICTED: uncharacterized protein LOC10	0.989	0.970	0.771	0.0
153850908		673	neutral invertase [Vitis vinifera]	0.993	0.974	0.773	0.0
163913882		676	putative neutral invertase [Vitis vinife	0.993	0.970	0.770	0.0
163913880		676	putative neutral invertase [Vitis vinife	0.989	0.965	0.768	0.0
356565169		680	PREDICTED: uncharacterized protein LOC10	0.998	0.969	0.743	0.0
356521727		679	PREDICTED: uncharacterized protein LOC10	0.995	0.967	0.746	0.0
408362895		682	neutral invertase [Malus x domestica]	0.990	0.958	0.754	0.0

>gi\|255556486\|ref\|XP_002519277.1\| beta-fructofuranosidase, putative [Ricinus communis] gi\|223541592\|gb\|EEF43141.1\| beta-fructofuranosidase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1095 bits (2831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/684 (78%), Positives = 593/684 (86%), Gaps = 28/684 (4%)

Query: 1   MNTSSCIGISTMKPCCRILIGYRISSIFGVSHIR-SNHKIVNNSSKLHSKS----KLSCY 55
           M+TSSCIGIST+KPCCRILIGY+ SS+FG S  + SN  I NN SK  SKS    +  CY
Sbjct: 1   MSTSSCIGISTVKPCCRILIGYKNSSLFGFSPPKLSNQVINNNLSKSQSKSPHHRRFHCY 60

Query: 56  N-DAKCKVIGHKKGVIDLNRRAFFASGSNWGESKILGKNKLGVNKDSSRGILVIPHVASD 114
           + + + ++IG+ K +++ NRR F  S S W +SK+L  + L VN  + RG+LVIP V+SD
Sbjct: 61  SVNNRSRIIGNNKCIVNPNRRTFNISDSCWSQSKVL-TSSLHVNIGTLRGLLVIPKVSSD 119

Query: 115 FRNHSTSIDSHVNEKGFESIYIQGGLNVKPLVIE---NGNEVVKEDG--SRVQVNGSGVN 169
            RNHSTS++SH+NEKGFE+IYIQGGLNVKPLVIE    GN VVKE+   S+V++NG+ VN
Sbjct: 120 IRNHSTSVESHINEKGFENIYIQGGLNVKPLVIEKIETGNNVVKEEDQCSKVEINGTHVN 179

Query: 170 LDILKDLNENV-ETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQV 228
           LD  K LNE   + E E S IEKEAWKLL  A+VNYCGNPVGTVAAN+PADKQPLNYDQV
Sbjct: 180 LDYFKGLNEIAPKVERERSEIEKEAWKLLEGAIVNYCGNPVGTVAANDPADKQPLNYDQV 239

Query: 229 FIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLD 288
           FIRDFVPSALAFLLNGE DIVKNFLL+TLQLQSWEKTVDCYSPGQGLMPASFKVR VPLD
Sbjct: 240 FIRDFVPSALAFLLNGEADIVKNFLLYTLQLQSWEKTVDCYSPGQGLMPASFKVRGVPLD 299

Query: 289 GGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLI 348
           G DG  EEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDY LQER+DVQTGIRLI
Sbjct: 300 GSDGAFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYTLQERIDVQTGIRLI 359

Query: 349 LNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKN 408
           LNLCL+DGFDMFP+LLVTDGSCMIDRRMGIHGHPLEIQ+LFYSALRC+REMLIVNDGTKN
Sbjct: 360 LNLCLSDGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCAREMLIVNDGTKN 419

Query: 409 LVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDW 468
           LVAAIN+RLSALSFH+REYYWVDM KINEIYRYKTEEYS++A+NKFNIYPDQIPSWLVDW
Sbjct: 420 LVAAINSRLSALSFHIREYYWVDMMKINEIYRYKTEEYSSNAVNKFNIYPDQIPSWLVDW 479

Query: 469 IPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPL 528
           IP EGGYLIGNL+P HMDFRFFTLGNLWAIVSSLGT +QNEGILNLIEAKWDDLVAHMPL
Sbjct: 480 IPEEGGYLIGNLQPAHMDFRFFTLGNLWAIVSSLGTQKQNEGILNLIEAKWDDLVAHMPL 539

Query: 529 KICYPALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMA 573
           KI YPALD               PWSYHNGGSWPTLLWQFTLACIKMG+P LA+KA+A+A
Sbjct: 540 KISYPALDSEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGKPGLAEKAIALA 599

Query: 574 EKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYEL 633
           EKRLSVDQWPEYYDT+SGRFIGKQSRL QTWT+AGYLTSKMLLENP KASLLFW+EDY+L
Sbjct: 600 EKRLSVDQWPEYYDTRSGRFIGKQSRLCQTWTVAGYLTSKMLLENPEKASLLFWDEDYDL 659

Query: 634 LENCVCALSKTGRKKCLRFAARSQ 657
           LE CVCALSKT RKKC RFAARSQ
Sbjct: 660 LETCVCALSKTSRKKCSRFAARSQ 683

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|347949208\|gb\|AEP31948.1\| neutral/alkaline invertase [Manihot esculenta]	Back alignment and taxonomy information

>gi\|147773544\|emb\|CAN63178.1\| hypothetical protein VITISV_029106 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225432057\|ref\|XP_002280462.1\| PREDICTED: uncharacterized protein LOC100233037 [Vitis vinifera] gi\|296083207\|emb\|CBI22843.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|153850908\|gb\|ABS52644.1\| neutral invertase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|163913882\|emb\|CAP59644.1\| putative neutral invertase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|163913880\|emb\|CAP59643.1\| putative neutral invertase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356565169\|ref\|XP_003550817.1\| PREDICTED: uncharacterized protein LOC100783794 [Glycine max]	Back alignment and taxonomy information

>gi\|356521727\|ref\|XP_003529503.1\| PREDICTED: uncharacterized protein LOC100791877 [Glycine max]	Back alignment and taxonomy information

>gi\|408362895\|gb\|AFU56879.1\| neutral invertase [Malus x domestica]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		660
TAIR\|locus:2084329		664	A/N-InvC "alkaline/neutral inv	0.960	0.954	0.675	2.1e-242
TAIR\|locus:2027600		616	A/N-InvA "alkaline/neutral inv	0.833	0.892	0.709	1.2e-221
TAIR\|locus:2171112		617	INV-E "alkaline/neutral invert	0.712	0.761	0.705	2.5e-191
TAIR\|locus:2074434		659	INVH "invertase H" [Arabidopsi	0.640	0.641	0.691	2.7e-164
TAIR\|locus:2116870		571	A/N-InvB "alkaline/neutral inv	0.659	0.761	0.576	4.6e-144
TAIR\|locus:2133737		558	CINV2 "cytosolic invertase 2"	0.681	0.806	0.553	6.1e-142
TAIR\|locus:2199690		534	A/N-InvD "alkaline/neutral inv	0.657	0.812	0.574	1.7e-139
TAIR\|locus:2014676		551	CINV1 "cytosolic invertase 1"	0.657	0.787	0.570	7.2e-139
TAIR\|locus:2016064		499	A/N-InvF "alkaline/neutral inv	0.657	0.869	0.566	4e-138

TAIR\|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2336 (827.4 bits), Expect = 2.1e-242, P = 2.1e-242
 Identities = 457/677 (67%), Positives = 533/677 (78%)

Query:     1 MNTSSCIGISTMKPCCRILIGYRISSIFGVSHIRSNHKIVNNXXXXXXXXXXXCYNDAKC 60
             MN+ SCI +S MKPCCR LI +R SS+FG S   S  K +N+              D++ 
Sbjct:     1 MNSRSCICVSAMKPCCRFLISFRSSSLFGFSPPNSG-KFINSSKLHCTKI------DSRS 53

Query:    61 KVIG-HKKGVIDLNRRAFFASGS-NWGE--SKILGKNKLGVNKDSSRGILVIPHVASDFR 116
                G H + ++ L+R AF  S S +WG   S++L     G ++   RG+LVIPHVASDFR
Sbjct:    54 IRSGIHCRRIV-LDRNAFCDSDSISWGGGGSRVLRAR--GSSRGRGRGVLVIPHVASDFR 110

Query:   117 NHSTS-IDSHVNEKGFESIYIQGGLNVKPLV---IENGNEVVKEDGSRVQVNGSGVNLDI 172
             N+STS +DSHVN+K FES++      VKPLV   +E    + K +   V   G   N   
Sbjct:   111 NYSTSSLDSHVNDKSFESMF------VKPLVFKEVEKTEGIPKRERGNVG-GGKDANFGN 163

Query:   173 LKDLNENVETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRD 232
             +    E     S+ + +EKEAWKLLR AVVNYCG PVGTVAAN+P D Q LNYDQVFIRD
Sbjct:   164 VGVRKETERCLSQ-TEVEKEAWKLLRGAVVNYCGFPVGTVAANDPGDTQTLNYDQVFIRD 222

Query:   233 FVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDG 292
             FVPSA AF+L+GEG+IV+NFLLHTLQLQSWEKTVDC+SPG GLMPASFKV++ PL+G DG
Sbjct:   223 FVPSAYAFMLDGEGEIVRNFLLHTLQLQSWEKTVDCHSPGPGLMPASFKVKSAPLEGNDG 282

Query:   293 TLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLC 352
             + EE LDPDFG SAIGRV+PVDSGLWWIILLRAYGK+TGDY LQER+DVQTGI+LIL LC
Sbjct:   283 SFEEFLDPDFGGSAIGRVSPVDSGLWWIILLRAYGKLTGDYTLQERIDVQTGIKLILKLC 342

Query:   353 LTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAA 412
             L DGFDMFP+LLVTDGSCM+DRRMGIHGHPLEIQ+LFYSALRC+REMLIVNDGTK+LV A
Sbjct:   343 LADGFDMFPTLLVTDGSCMVDRRMGIHGHPLEIQALFYSALRCAREMLIVNDGTKSLVTA 402

Query:   413 INNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNE 472
             +NNRLSALSFH+REYYWVD+KKINEIYRY TEEYSADA NKFNIYP+QIP+WLVDWIP++
Sbjct:   403 VNNRLSALSFHIREYYWVDIKKINEIYRYNTEEYSADATNKFNIYPEQIPTWLVDWIPDK 462

Query:   473 GGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICY 532
             GGY IGNL+P HMDFRFFTLGNLWA++SSLG   QNEG++ LIE KWDDLVA+MPLKIC+
Sbjct:   463 GGYFIGNLQPAHMDFRFFTLGNLWAVISSLGNQEQNEGVMTLIEEKWDDLVANMPLKICF 522

Query:   533 PALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRL 577
             PAL+               PWSYHNGGSWPTLLWQFTLACIKMG+ ELA+KAVA+AEKRL
Sbjct:   523 PALEKDEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGKLELAKKAVAVAEKRL 582

Query:   578 SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENC 637
               D+WPEYYDT+SGRF+GKQSRL+QTWTIAG+L +K L+E P KASLLFWEEDY+LLE C
Sbjct:   583 KEDEWPEYYDTKSGRFVGKQSRLYQTWTIAGFLAAKKLIEQPEKASLLFWEEDYQLLETC 642

Query:   638 VCALSKT-GRK-KCLRF 652
             VC LSK+ GRK KC RF
Sbjct:   643 VCGLSKSSGRKNKCSRF 659

GO:0003824 "catalytic activity" evidence=IEA

GO:0004564 "beta-fructofuranosidase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR\|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	ni2	SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (673 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	CWINV	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa)	•	0.481

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		660
pfam12899		437	pfam12899, Glyco_hydro_100, Alkaline and neutral i	0.0
PLN02703		618	PLN02703, PLN02703, beta-fructofuranosidase	0.0
PLN03005		550	PLN03005, PLN03005, beta-fructofuranosidase	0.0
PLN02973		571	PLN02973, PLN02973, beta-fructofuranosidase	0.0
COG3408		641	COG3408, GDB1, Glycogen debranching enzyme [Carboh	8e-05

>gnl\|CDD\|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase	Back alignment and domain information

 Score =  804 bits (2079), Expect = 0.0
 Identities = 287/443 (64%), Positives = 346/443 (78%), Gaps = 21/443 (4%)

Query: 192 EAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKN 251
           EAW+LL  ++V Y G PVGTVAA +P+ +  LNYDQ FIRDFVPSALAFLL G  +IV+N
Sbjct: 1   EAWELLEKSLVYYQGRPVGTVAALDPSAEDALNYDQCFIRDFVPSALAFLLKGRPEIVRN 60

Query: 252 FLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVA 311
           FLL TLQLQS EKTVDC+ PG+G+MPASFKV     +      EE L  DFGE AIGRVA
Sbjct: 61  FLLETLQLQSQEKTVDCFEPGRGVMPASFKVLHDKDE------EETLIADFGERAIGRVA 114

Query: 312 PVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCM 371
           PVDSGLWWIILLRAY K TGDY+  E  DVQ GIRLIL+LCL+D FDMFP+LLV DG+ M
Sbjct: 115 PVDSGLWWIILLRAYVKATGDYSFAESPDVQRGIRLILDLCLSDRFDMFPTLLVPDGAFM 174

Query: 372 IDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVD 431
           IDRRMG++GHPLEIQ+LFY ALRC+RE+L  ++  K+L+  I+NRL AL FH+REYYW+D
Sbjct: 175 IDRRMGVYGHPLEIQALFYGALRCARELLEPDEDGKDLIERIDNRLRALRFHIREYYWLD 234

Query: 432 MKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFT 491
           + ++NEIYRYKTEEY  DA+NKFNIYP+ IP WL DW+P  GGYLIGNL PG MDFRFF+
Sbjct: 235 LDRLNEIYRYKTEEYGDDAVNKFNIYPESIPDWLFDWLPERGGYLIGNLGPGRMDFRFFS 294

Query: 492 LGNLWAIVSSLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALD--------------- 536
           LGNL AI+SSL T  Q++ I++LIE +WDDL+  MP+KICYPAL+               
Sbjct: 295 LGNLLAILSSLATEEQSQAIMDLIEERWDDLIGEMPMKICYPALEGEEWRIVTGCDPKNT 354

Query: 537 PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVAMAEKRLSVDQWPEYYDTQSGRFIGK 596
           PWSYHNGGSWP LLW  T A +K GRP+LA++A+ +AEKRL  D+WPEYYD ++GR +GK
Sbjct: 355 PWSYHNGGSWPVLLWLLTAAALKTGRPDLAERAIEIAEKRLPKDEWPEYYDGKTGRLVGK 414

Query: 597 QSRLHQTWTIAGYLTSKMLLENP 619
           Q+R +QTWTIAG+L +K LLENP
Sbjct: 415 QARKYQTWTIAGFLLAKHLLENP 437

This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. Length = 437

>gnl\|CDD\|178306 PLN02703, PLN02703, beta-fructofuranosidase	Back alignment and domain information

>gnl\|CDD\|178582 PLN03005, PLN03005, beta-fructofuranosidase	Back alignment and domain information

>gnl\|CDD\|178556 PLN02973, PLN02973, beta-fructofuranosidase	Back alignment and domain information

>gnl\|CDD\|225942 COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		660
PLN02703		618	beta-fructofuranosidase	100.0
PLN02973		571	beta-fructofuranosidase	100.0
PF12899		436	Glyco_hydro_100: Alkaline and neutral invertase; I	100.0
PLN03005		550	beta-fructofuranosidase	100.0
PF06202		370	GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR	100.0
COG3408		641	GDB1 Glycogen debranching enzyme [Carbohydrate tra	100.0
TIGR01561		575	gde_arch glycogen debranching enzyme, archaeal typ	100.0
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	100.0
PRK10137		786	alpha-glucosidase; Provisional	99.97
KOG3625		1521	consensus Alpha amylase [Carbohydrate transport an	99.91
TIGR01577		616	oligosac_amyl oligosaccharide amylase. The name of	99.88
PRK13271		569	treA trehalase; Provisional	99.71
PLN02567		554	alpha,alpha-trehalase	99.64
PF04685		365	DUF608: Protein of unknown function, DUF608; Inter	99.54
PRK13272		542	treA trehalase; Provisional	99.53
COG3387		612	SGA1 Glucoamylase and related glycosyl hydrolases	99.5
PRK13270		549	treF trehalase; Provisional	99.5
PF01204		512	Trehalase: Trehalase; InterPro: IPR001661 O-Glycos	99.44
PF05592		509	Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int	99.39
PF03200		801	Glyco_hydro_63: Mannosyl oligosaccharide glucosida	99.13
COG3459		1056	Cellobiose phosphorylase [Carbohydrate transport a	99.11
TIGR01535		648	glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc	99.1
PF00723		448	Glyco_hydro_15: Glycosyl hydrolases family 15; Int	98.53
COG1626		558	TreA Neutral trehalase [Carbohydrate transport and	98.39
COG4354		721	Predicted bile acid beta-glucosidase [Carbohydrate	98.14
KOG2161		849	consensus Glucosidase I [Carbohydrate transport an	98.03
PF06824		424	DUF1237: Protein of unknown function (DUF1237); In	97.71
KOG0602		600	consensus Neutral trehalase [Carbohydrate transpor	97.68
COG3538		434	Uncharacterized conserved protein [Function unknow	96.55
KOG2119		879	consensus Predicted bile acid beta-glucosidase [Ca	90.12

>PLN02703 beta-fructofuranosidase	Back alignment and domain information

Probab=100.00  E-value=1.4e-142  Score=1157.78  Aligned_cols=480  Identities=71%  Similarity=1.249  Sum_probs=469.9

Q ss_pred             ccccccchHHHHHHHHHHHhhccccCccceeEeecCCCCCCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhhhc
Q 006131          181 ETESEASNIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQ  260 (660)
Q Consensus       181 ~~~~~~~~~~~~A~~lLr~~~v~~~~~p~GtlAA~~p~~~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~lQ  260 (660)
                      ...++.++++++||++||+++|+|||+|+||+||.+++..+++||++||+||++||+|++|++|++||||+||.++++||
T Consensus       124 ~~~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq  203 (618)
T PLN02703        124 AQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQ  203 (618)
T ss_pred             ccccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhh
Confidence            34667799999999999999999999999999999986546799999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHhhh
Q 006131          261 SWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD  340 (660)
Q Consensus       261 ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~~~  340 (660)
                      +||+++|+|++++|+||+||||.|+|++++++.+||+++||||+.+|||+++|||+|||||++++|++.|||.+|+++++
T Consensus       204 ~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~  283 (618)
T PLN02703        204 SWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVD  283 (618)
T ss_pred             hhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhh
Confidence            99999999999999999999999999999888899999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHH
Q 006131          341 VQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSAL  420 (660)
Q Consensus       341 ~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~aL  420 (660)
                      +|++|++||+||++++|+++|+|+||||+||+|+||+++|||||||||||+||||+.+|+....+.++.++++..|+.+|
T Consensus       284 ~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L  363 (618)
T PLN02703        284 VQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVAL  363 (618)
T ss_pred             HHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999988777889999999999999


Q ss_pred             HHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCCccccccccchhHHHHh
Q 006131          421 SFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVS  500 (660)
Q Consensus       421 ~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~~d~Rf~slGN~LAils  500 (660)
                      ++|+++|||+|.+++|+||||+||+|+++|+|||||||++||+||.||||++||||+|||+|+++|||||++||+||+++
T Consensus       364 ~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs  443 (618)
T PLN02703        364 NFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVS  443 (618)
T ss_pred             HHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHhhhhhhhcCCCccccCCCCC---------------CCcccCCCCchhhHHHHHHHHHHcCCcHH
Q 006131          501 SLGTARQNEGILNLIEAKWDDLVAHMPLKICYPALD---------------PWSYHNGGSWPTLLWQFTLACIKMGRPEL  565 (660)
Q Consensus       501 gLl~~eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~---------------P~SYHNGgVWP~LLw~~~lA~lK~Gr~~~  565 (660)
                      ||+|++|+++||++|+++|+||++.||||+|||+++               ||||||||+||+|+|++++||+|+|++++
T Consensus       444 ~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~l  523 (618)
T PLN02703        444 SLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEI  523 (618)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHH
Confidence            999999999999999999999999999999999986               99999999999999999999999999999


Q ss_pred             HHHHHHHHHhHhcCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhcCCCccccccccccHHHHhhhhhhccccc
Q 006131          566 AQKAVAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEEDYELLENCVCALSKTG  645 (660)
Q Consensus       566 A~r~L~~a~~~L~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  645 (660)
                      |+++|+.++.++..+.|||||||++|+|+|++||.+|||||||||+++++|+||++++||++|||+++++.|+|.+++++
T Consensus       524 A~ral~~ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~~~~~  603 (618)
T PLN02703        524 AEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMISANP  603 (618)
T ss_pred             HHHHHHHHHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeecccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhccccC
Q 006131          646 RKKCLRFAARSQICV  660 (660)
Q Consensus       646 ~~~~~~~~~~~~~~~  660 (660)
                      |+||+|+++|++++|
T Consensus       604 ~~~~~~~~~~~~~~~  618 (618)
T PLN02703        604 RRTRGPKKAQQPFIV  618 (618)
T ss_pred             cccCCCccccCCccC
Confidence            999999999999986

>PLN02973 beta-fructofuranosidase	Back alignment and domain information

>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases	Back alignment and domain information

>PLN03005 beta-fructofuranosidase	Back alignment and domain information

>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT	Back alignment and domain information

>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>PRK10137 alpha-glucosidase; Provisional	Back alignment and domain information

>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01577 oligosac_amyl oligosaccharide amylase	Back alignment and domain information

>PRK13271 treA trehalase; Provisional	Back alignment and domain information

>PLN02567 alpha,alpha-trehalase	Back alignment and domain information

>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []	Back alignment and domain information

>PRK13272 treA trehalase; Provisional	Back alignment and domain information

>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK13270 treF trehalase; Provisional	Back alignment and domain information

>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3	Back alignment and domain information

>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes	Back alignment and domain information

>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase	Back alignment and domain information

>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG3538 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		660
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	4e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	5e-04

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807	Back alignment and structure

 Score = 65.5 bits (159), Expect = 4e-11
 Identities = 44/361 (12%), Positives = 91/361 (25%), Gaps = 60/361 (16%)

Query: 231 RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGG 290
           RD    A++ + +   ++ +  ++  L+ Q                P    V        
Sbjct: 349 RDTAQDAIS-VPHANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPTV 407

Query: 291 DGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYA-LQERVDVQTGIRLIL 349
             T       D  +    +    D  LW I  +  Y   TG+ +   + +    G    +
Sbjct: 408 VPTP-----SDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASV 462

Query: 350 NLCLTDGFDMFPSLLVTDGSCMI--------DRRMGIHGHPLEIQSLFYSALRCSREMLI 401
              +    D   S      + +         D      G    +  L + AL+   ++  
Sbjct: 463 YEHMKAALD--FSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFIDLAK 520

Query: 402 VNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQI 461
              G    V       + +      + W                             D  
Sbjct: 521 FL-GKDQDVNTYTEMAANVREACETHLW-----------------------------DDE 550

Query: 462 PSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSSLGTARQNEGILNLIEAKWDD 521
             W +  +   G  +         + R     N  A++S L +  + E  ++ ++     
Sbjct: 551 GGWYIRGLTKNGDKIGT---AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDEHLFS 607

Query: 522 LVAHMPLKICYPALD----------PWSYHNGGSWPTLLWQFTLACIKMGRPELAQKAVA 571
                     +   +               NG  +        +A  K+GR + A K   
Sbjct: 608 PYGLHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGDRAMKFYD 667

Query: 572 M 572
            
Sbjct: 668 A 668

PyMOL of 1v7w

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Length = 811	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		660
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	100.0
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	100.0
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	99.98
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	99.97
3rrs_A		822	Cellobiose phosphorylase; GH94, alpha barrel, disa	99.97
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	99.96
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	99.89
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	99.87
1ulv_A		1020	Glucodextranase; GH family 15, (alpha-alpha)6-barr	99.81
1lf6_A		684	Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica	99.8
2fba_A		492	Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy	99.3
1gai_A		472	Glucoamylase-471; hydrolase, glycosidase, polysacc	99.25
2vn4_A		599	Glucoamylase; hydrolase, carbohydrate binding, gly	99.22
2p0v_A		489	Hypothetical protein BT3781; alpha-beta protein, s	99.13
3qry_B		426	Putative uncharacterized protein; alpha-alpha six	98.75
3p2c_A		463	Putative glycosyl hydrolase; structural genomics,	98.62
3qt9_A		427	Putative uncharacterized protein CPE0426; alpha-al	98.58
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	95.87
1h54_A		754	Maltose phosphorylase; hydrolase, maltose metaboli	94.97
2eab_A		899	Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi	94.27

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}	Back alignment and structure

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*	Back alignment and structure

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}	Back alignment and structure

>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*	Back alignment and structure

>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*	Back alignment and structure

>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A	Back alignment and structure

>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*	Back alignment and structure

>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*	Back alignment and structure

>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8	Back alignment and structure

>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*	Back alignment and structure

>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*	Back alignment and structure

>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A	Back alignment and structure

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}	Back alignment and structure

>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3	Back alignment and structure

>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		660
d1v7wa1		531	a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb	5e-12

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531	Back information, alignment and structure


class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 66.5 bits (161), Expect = 5e-12
 Identities = 42/382 (10%), Positives = 89/382 (23%), Gaps = 56/382 (14%)

Query: 209 VGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDC 268
              V +   +  +      +  RD    A++       ++ +  ++  L+ Q        
Sbjct: 57  TCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLH 115

Query: 269 YSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGK 328
                   P    V                  D  +    +    D  LW I  +  Y  
Sbjct: 116 LFDPDWFDPEKEDVAP-----SKSPTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVM 170

Query: 329 ITGDYA-LQERVDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMI------DRRMGIHGH 381
            TG+ +   + +    G    +   +    D     +   G C        D      G 
Sbjct: 171 ETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQTGICKGLRADWNDCLNLGGGE 230

Query: 382 PLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDMKKINEIYRY 441
              +  L + AL+                             +    ++   +    Y  
Sbjct: 231 SSMVSFLHFWALQ---------------------------EFIDLAKFLGKDQDVNTYTE 263

Query: 442 KTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGHMDFRFFTLGNLWAIVSS 501
                                 W +  +   G  +         + R     N  A++S 
Sbjct: 264 MAANVREACETHLWDDEGG---WYIRGLTKNGDKI---GTAQQQEGRVHLESNTLAVLSG 317

Query: 502 LGTARQNEGILNLIEAKWDDLVAHMPLKICYP----------ALDPWSYHNGGSWPTLLW 551
           L +  + E  ++ ++               +            +      NG  +     
Sbjct: 318 LASQERGEQAMDAVDEHLFSPYGLHLNAPSFSTPNDDIGFVTRVYQGVKENGAIFSHPNP 377

Query: 552 QFTLACIKMGRPELAQKAVAMA 573
              +A  K+GR + A K     
Sbjct: 378 WAWVAETKLGRGDRAMKFYDAL 399

PyMOL of d1v7wa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		660
d1lf6a1		397	Bacterial glucoamylase, C-terminal domain {Thermoa	99.93
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	99.91
d2jg0a1		511	Periplasmic trehalase TreA {Escherichia coli [TaxI	99.85
d1ulva1		413	Glucodextranase, domain A {Arthrobacter globiformi	99.81
d2fbaa1		492	Glucoamylase {Yeast (Saccharomycopsis fibuligera)	98.93
d1gaia_		472	Glucoamylase {Aspergillus awamori, variant x100 [T	98.76
d2p0va1		443	Hypothetical protein BT3781 {Bacteroides thetaiota	98.09
d2nvpa1		426	Hypothetical protein CPF0428 {Clostridium perfring	97.86
d1h54a1		485	Lactobacillus maltose phosphorylase, central domai	90.76

>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Bacterial glucoamylase C-terminal domain-like
domain: Bacterial glucoamylase, C-terminal domain
species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]

Probab=99.93  E-value=8.4e-25  Score=227.43  Aligned_cols=349  Identities=15%  Similarity=0.095  Sum_probs=230.7

Q ss_pred             cchHHHHHHHHHHHhhccccCccceeE-eecCCCC------CCCCCCCCCcccchHHHHHHHHhcCChHHHHHHHHHHhh
Q 006131          186 ASNIEKEAWKLLRDAVVNYCGNPVGTV-AANNPAD------KQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQ  258 (660)
Q Consensus       186 ~~~~~~~A~~lLr~~~v~~~~~p~Gtl-AA~~p~~------~~~~nY~~vFgRD~vISal~~L~~G~peiar~~L~tla~  258 (660)
                      ...|+++++-.|+.. +  +.++-|.+ ||...+-      .....|.-+|+||+++++.+++..|.+++++.+|.++++
T Consensus         7 ~~~~~~~s~~~lk~~-~--~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~l~~   83 (397)
T d1lf6a1           7 ANSLYYNSMMILKAS-E--DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAK   83 (397)
T ss_dssp             CCHHHHHHHHHHHTT-B--CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-c--CCCCCceEEEeCCCCcccccCCCCCCCCeeEcHhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            357899999999864 2  22344555 6654221      123469999999999999999999999999999999997


Q ss_pred             hcccccccccCCCCCCCCCCcceeeeccCCCCCCCccceecCCCCCCCCCcccCCCcHHHHHHHHHHHHHHhCcHhHHHh
Q 006131          259 LQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER  338 (660)
Q Consensus       259 lQ~~e~~ld~~~~~~GliP~sFKV~h~~~~~~~~~~e~~l~aD~Ge~~~~yygsVDAtLWfIIal~~Y~k~TGD~~f~~~  338 (660)
                      .|..          .|.+|+.+-      .+             |+. .+.....|++.|++++++.|.+.+..      
T Consensus        84 ~~~~----------~G~~~~~~~------~~-------------G~~-~~~~~q~D~~g~~i~a~~~~~~~~~~------  127 (397)
T d1lf6a1          84 VVKD----------NGMIPQNTW------IS-------------GKP-YWTGIQLDEQADPIILSYRLKRYDLY------  127 (397)
T ss_dssp             HHHH----------HSSCCSCBC------TT-------------SCB-CCCCCCHHHHHHHHHHHHHTTCGGGT------
T ss_pred             Hhcc----------cCCCCCCCC------cC-------------CCc-cccCCCCchHHHHHHHHHHHHhcchh------
Confidence            6643          366787541      11             111 12234679999999999999765433      


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCceeecCCCccccccccccCcccchhHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 006131          339 VDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLS  418 (660)
Q Consensus       339 ~~~q~~I~~IL~w~l~dgFd~~p~Llv~dGs~w~D~rm~r~G~PlEVQALwY~ALr~aaeL~~~~~g~~~~a~~l~~ra~  418 (660)
                         .+.|+.+++++.+..       .-++...|..    +.|+..++++.+|.||++++.++... ++...+..+.+.+.
T Consensus       128 ---~~~i~~~~~~l~~~~-------~~~~~~lWEe----~~g~~~~t~~~~~~aL~~~a~la~~~-g~~~~a~~~~~~A~  192 (397)
T d1lf6a1         128 ---DSLVKPLADFIIKIG-------PKTGQERWEE----IGGYSPATMAAEVAGLTCAAYIAEQN-KDYESAQKYQEKAD  192 (397)
T ss_dssp             ---TTTHHHHHHHHHHHC-------SSBSSCTTSS----CCBBCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHhC-------CCCccccccc----cCCcccchhHHHHHHHHHHHHHHHhc-CChhHHHHHHHHHH
Confidence               445566777776521       1234445743    57889999999999999999999874 66778888888888


Q ss_pred             HHHHHHHhhhhcchhhhhHhhhcccccchhhhhhhcCCCCCCCcccccccccCCCCceeeccCCCC---ccccccccchh
Q 006131          419 ALSFHVREYYWVDMKKINEIYRYKTEEYSADAINKFNIYPDQIPSWLVDWIPNEGGYLIGNLEPGH---MDFRFFTLGNL  495 (660)
Q Consensus       419 aL~~~~~~~FWld~k~l~~i~r~~te~y~~~a~nkFni~p~~ip~wl~~wl~~~ggYL~g~v~P~~---~d~Rf~slGN~  495 (660)
                      .++..+.++||.+......-. +    +..           ..+.    .-+ ..+......++..   .+...++ ..+
T Consensus       193 ~i~~~i~~~~~~~~~~~~~~~-~----~~r-----------~~~~----~~~-~~~~~~~~~~~~~~~~~~~~lDa-sll  250 (397)
T d1lf6a1         193 NWQKLIDNLTYTENGPLGNGQ-Y----YIR-----------IAGL----SDP-DADFMINIANGGGVYDQKEIVDP-SFL  250 (397)
T ss_dssp             HHHHHHHHHHEESSCSSTTSC-E----ECS-----------CBSS----SCT-TSCCEEEETTTTEEEEGGGCCCG-GGG
T ss_pred             HHHHHHHHhccCccccccccc-c----eec-----------cccc----cCc-cccccccccccccccccCCCcCH-HHh
Confidence            899999999987654321100 0    000           0000    000 0011111111111   0111122 345


Q ss_pred             HHHHhcCCCH--HHHHHHHHHHHhhhhhhhcCCCccccCCCCC------------CCcccCCCCchhhHHHHHHHHHHcC
Q 006131          496 WAIVSSLGTA--RQNEGILNLIEAKWDDLVAHMPLKICYPALD------------PWSYHNGGSWPTLLWQFTLACIKMG  561 (660)
Q Consensus       496 LAilsgLl~~--eqa~~Il~~I~~~w~dL~t~~gLRtl~Pa~~------------P~SYHNGgVWP~LLw~~~lA~lK~G  561 (660)
                      +++.+++.++  ++....++.+++   +|..++|+....+.+.            +..+|+|+.||.....++.++++.|
T Consensus       251 ~~~~~g~~~~~d~~~~~tl~~i~~---~l~~~~g~~~~~~RY~~D~y~~~~~~~~~~~~~~g~pW~i~T~~~a~~~~~~g  327 (397)
T d1lf6a1         251 ELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERGMYEIAAG  327 (397)
T ss_dssp             HHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHHHHHHHTT
T ss_pred             hccccCCCCCCCHHHHHHHHHHHH---HhccCCCccccccccccccccccCCcCCccCCcCCchHHHHHHHHHHHHHHcc
Confidence            5566777655  444444555544   7888888776655543            4556777777776666788888888


Q ss_pred             CcHHHHHHHHHHHhHh-cCCCcCccccCCCCCCCCCCCchhhhhhHHHHHHHHHHhc
Q 006131          562 RPELAQKAVAMAEKRL-SVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLE  617 (660)
Q Consensus       562 r~~~A~r~L~~a~~~L-~~~~~pE~FDG~tg~p~G~~ac~~QAWSaA~~L~a~~lL~  617 (660)
                      +  .|+++|+.+..+. ..+.+||.||+.+|.|.|.  +.+||||.|+||++...|+
T Consensus       328 ~--~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~--a~plaWS~A~~i~~~~~l~  380 (397)
T d1lf6a1         328 K--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI  380 (397)
T ss_dssp             C--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHHhcCCCCccceeecCCCCCcCCC--CccHHHHHHHHHHHHHHHh
Confidence            6  5778888877665 5578999999999988863  4599999999998877765

PyMOL of d1lf6a1

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure

>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]}	Back information, alignment and structure

>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]}	Back information, alignment and structure

>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}	Back information, alignment and structure

>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]}	Back information, alignment and structure