Citrus Sinensis ID: 006153

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSKEKLEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINVGANRSFA
ccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHcHHHHcccccccccccccccccEEEccEEEEEEEEcccccHHHHHHHccccccccHHHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHcccccccHHHHHHHcccHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEcccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccEEEEEEccccccHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEEEEccccccccccHHHccHHHHHHHHHHHHHcccccEEEEEEcccccccHHEEEHHHHHHHHHHcEEEEEcHHHHHHHHHccHHHHHHHHHHHcccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEccccccc
mandtgldfsDQIVSLENKYQQALKDLYTHltpiqrvniarhpnrptflDHVFNITEKFVELhgdragyddpaivtgigsmdgrtymfmghqkgrntkeniqrnfgmptphgyRKALRMMYYadhhgfpivtfidtpgayadlkseelgqGEAIAHNLRTMFGLKVPIISIvigeggsggaLAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCklqiadgvipeplggahadpswtsQQIKIAINESMDELGKMDTQELLKHRNLkfrkiggfqegipidpkkkvnmkkkegpiasktsKEKLEDEVEKLKQQILKAkesstkppdAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFskgnsrdqlmdPILMDKITELKNEFNqglasapnyaSLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKlqdsgassfsdLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAkagkkpdvkskCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISdatkspggldggvnnehakddsskydesRVEINvganrsfa
mandtgldfsDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKgrntkeniqrnfgMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLkfrkiggfqegipidpkkkvnmkkkegpiasktskekleDEVEKLKQQIlkakesstkppdaALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFskgnsrdqlMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEinkkfeevicrpDIKEKMEAIKAKlqdsgassfsdleDDLKEKLVETKKEIEselidgleslglDVEVVKSKAkelseqtsfsnfrsKMENLNEEINKKIEDVINSSDLKDMIELLKLEiakagkkpdvkskCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISdatkspggldgGVNNEhakddsskydesrveinvganrsfa
MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPiisivigeggsggalaigCANKLLMLENAVFYVASPEACAAILWksakaspkaaeklkITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSkekledeveklkQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMenlneeinkkieDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINVGANRSFA
***********QIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGH************NFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKA****AEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAI**************LLKHRNLKFRKIGGFQ******************************************************************************************************ILMDKITELKNEFNQGLASAPNYASLKYKLDMLK*************************FEEVICR**************************************************LGLD*******************************************LKDMIELLKLEIA***************************************************************************************
*****GL*FSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQE**************************************************************KEVDHEFSEAAKAMGMQEKFATL****************ILMDKITELKNEFN***ASA*NYASLKYKLDML**************************FEEVICRPDIK*****************************VET**EIESELIDGLESLGLDVEV***********************************INSSDLKDMIELL************************QIK*******************************************************INVGAN****
MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKS*********KLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSKEKLEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKA********KCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNE************RVEINVGANRSFA
*****GLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPK*******KEGPIASKTSKEKLEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDS**SSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATK*****************SSKYDESRVEINVGAN****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSxxxxxxxxxxxxxxxxxxxxxSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSxxxxxxxxxxxxxxxxxxxxxVICRPDIKEKMEAIKAKLQDSGASSFSDLxxxxxxxxxxxxxxxxxxxxxGxxxxxxxxxxxxxxxxxxxxxTSxxxxxxxxxxxxxxxxxxxxxxxxxSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNxxxxxxxxxxxxxxxxxxxxxPGGLDGGVNNEHAKDDSSKYDESRVEINVGANRSFA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query658 2.2.26 [Sep-21-2011]
Q9LD43769 Acetyl-coenzyme A carboxy yes no 0.919 0.786 0.677 0.0
Q41008875 Acetyl-coenzyme A carboxy N/A no 0.916 0.689 0.497 1e-160
Q8DJB6324 Acetyl-coenzyme A carboxy yes no 0.448 0.910 0.511 6e-90
Q1XDB6324 Acetyl-coenzyme A carboxy N/A no 0.446 0.907 0.544 5e-85
P74638326 Acetyl-coenzyme A carboxy N/A no 0.446 0.901 0.544 6e-85
B1XK66325 Acetyl-coenzyme A carboxy yes no 0.446 0.904 0.534 6e-83
B8HSZ5325 Acetyl-coenzyme A carboxy yes no 0.442 0.895 0.518 9e-83
B1WPW6332 Acetyl-coenzyme A carboxy yes no 0.446 0.885 0.530 1e-82
B2J1L9326 Acetyl-coenzyme A carboxy yes no 0.446 0.901 0.534 2e-82
B7JZP4324 Acetyl-coenzyme A carboxy yes no 0.446 0.907 0.527 2e-82
>sp|Q9LD43|ACCA_ARATH Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic OS=Arabidopsis thaliana GN=CAC3 PE=1 SV=1 Back     alignment and function desciption
 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/617 (67%), Positives = 520/617 (84%), Gaps = 12/617 (1%)

Query: 1   MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFV 60
           MAN+TGLDF++QI++LENKY+QALKDLYTHLTPIQRVNIARHPNRPTFLDH+ NIT+KF+
Sbjct: 117 MANETGLDFTEQIITLENKYRQALKDLYTHLTPIQRVNIARHPNRPTFLDHIHNITDKFM 176

Query: 61  ELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMM 120
           ELHGDRAGYDDPAIVTGIG++DG+ YMF+GHQKGRNTKENI RNFGMPTPHGYRKALRMM
Sbjct: 177 ELHGDRAGYDDPAIVTGIGTIDGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMM 236

Query: 121 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 180
           YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIA+NLRTMFGLKVPI+SIVIGEGGSGG
Sbjct: 237 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGG 296

Query: 181 ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGV 240
           ALAIGCANK+LMLENAVFYVASPEACAAILWK++KA+P+AAEKL+IT  EL KL +ADG+
Sbjct: 297 ALAIGCANKMLMLENAVFYVASPEACAAILWKTSKAAPEAAEKLRITSKELVKLNVADGI 356

Query: 241 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDP 300
           IPEPLGGAHADPSWTSQQIKIAINE+M+E GKM  +ELLKHR  K+RKIG F EG PI+P
Sbjct: 357 IPEPLGGAHADPSWTSQQIKIAINENMNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEP 416

Query: 301 KKKVNMKKKEGPIASKTSKEKLEDEVEKLKQQILKAKESST--KPPDAALNVMIQKLKKE 358
            +K+NMKK+E   A  +   KL+ EV+KLK+QILKAKE+ST  +P    LN MI+KLK E
Sbjct: 417 SRKINMKKRE---AVFSDSRKLQGEVDKLKEQILKAKETSTEAEPSSEVLNEMIEKLKSE 473

Query: 359 VDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNY 418
           +D E++EAA A+G++E+   +R EFSK +S + LM P+L++KI +LK EFN  L  APNY
Sbjct: 474 IDDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEKIEKLKEEFNTRLTDAPNY 533

Query: 419 ASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDS 478
            SLK KL+ML++FS AK    + ++A  LK+EINK+F+E + RP+I+EK+EAIKA++  S
Sbjct: 534 ESLKSKLNMLRDFSRAK----AASEATSLKKEINKRFQEAVDRPEIREKVEAIKAEVASS 589

Query: 479 GASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQ--TSFSNFR 536
           GASSF +L D LKEK+++TK E+E+E+   L+S+GL+++ VK   K+ +EQ   +  N +
Sbjct: 590 GASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQKDTAEQIYAANENLQ 649

Query: 537 SKMENLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDV-KSKCKIQALEQQIKQR 595
            K+E LN+EI  KIE+V+ + ++K M+ELLK+E AKA K P V ++  KI+ALEQQIKQ+
Sbjct: 650 EKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEAYQKIEALEQQIKQK 709

Query: 596 LSEAVNSSELKEKHEEL 612
           ++EA+N+S L+EK +EL
Sbjct: 710 IAEALNTSGLQEKQDEL 726
Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 4EC: .EC: 1EC: .EC: 2
>sp|Q41008|ACCA_PEA Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic OS=Pisum sativum GN=ACCA PE=1 SV=1 Back     alignment and function description
>sp|Q8DJB6|ACCA_THEEB Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Thermosynechococcus elongatus (strain BP-1) GN=accA PE=3 SV=1 Back     alignment and function description
>sp|Q1XDB6|ACCA_PORYE Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Porphyra yezoensis GN=accA PE=3 SV=1 Back     alignment and function description
>sp|P74638|ACCA_SYNY3 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=accA PE=3 SV=1 Back     alignment and function description
>sp|B1XK66|ACCA_SYNP2 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=accA PE=3 SV=1 Back     alignment and function description
>sp|B8HSZ5|ACCA_CYAP4 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=accA PE=3 SV=1 Back     alignment and function description
>sp|B1WPW6|ACCA_CYAA5 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Cyanothece sp. (strain ATCC 51142) GN=accA PE=3 SV=1 Back     alignment and function description
>sp|B2J1L9|ACCA_NOSP7 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=accA PE=3 SV=1 Back     alignment and function description
>sp|B7JZP4|ACCA_CYAP8 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Cyanothece sp. (strain PCC 8801) GN=accA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query658
307566888 770 acetyl-CoA carboxylase alpha-CT subunit 1.0 0.854 0.776 0.0
259090632 770 alpha-carboxyltransferase subunit [Jatro 1.0 0.854 0.773 0.0
255573891 766 carboxyl-tansferase, subunit of Het-ACCa 0.989 0.849 0.765 0.0
156144962 761 chloroplast acetyl-CoA carboxylase carbo 0.984 0.851 0.729 0.0
156144960 760 chloroplast acetyl-CoA carboxylase carbo 0.983 0.851 0.721 0.0
224138998 760 predicted protein [Populus trichocarpa] 0.981 0.85 0.735 0.0
359481689 763 PREDICTED: acetyl-coenzyme A carboxylase 0.986 0.850 0.728 0.0
224087669753 predicted protein [Populus trichocarpa] 0.972 0.849 0.749 0.0
193290650757 putative acetyl co-enzyme A carboxylase 0.969 0.842 0.703 0.0
449506447 761 PREDICTED: LOW QUALITY PROTEIN: acetyl-c 0.986 0.852 0.693 0.0
>gi|307566888|gb|ADN52610.1| acetyl-CoA carboxylase alpha-CT subunit [Jatropha curcas] Back     alignment and taxonomy information
 Score = 1058 bits (2735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/658 (77%), Positives = 586/658 (89%)

Query: 1   MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFV 60
           MAN+TGLDF+DQI+SLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVF+IT+KFV
Sbjct: 113 MANETGLDFTDQIISLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFSITDKFV 172

Query: 61  ELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMM 120
           ELHGDRAGYDDPAIVTGIG++DGR YMFMGHQKGRNTKENI RNFGMPTPHGYRKALRMM
Sbjct: 173 ELHGDRAGYDDPAIVTGIGTIDGRRYMFMGHQKGRNTKENIMRNFGMPTPHGYRKALRMM 232

Query: 121 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 180
           YYADHHGFPIVTFIDTPGA+ADLKSEELGQGEAIAHNLRTMFGLKVPI+SIVIGEGGSGG
Sbjct: 233 YYADHHGFPIVTFIDTPGAFADLKSEELGQGEAIAHNLRTMFGLKVPIVSIVIGEGGSGG 292

Query: 181 ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGV 240
           ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKIT +ELCKLQIADGV
Sbjct: 293 ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITATELCKLQIADGV 352

Query: 241 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDP 300
           IPEPLGGAHADPSWTSQQIK AI ESMDEL KMDT ELLKHR LKFRKIGGFQEGIPIDP
Sbjct: 353 IPEPLGGAHADPSWTSQQIKNAIKESMDELTKMDTGELLKHRMLKFRKIGGFQEGIPIDP 412

Query: 301 KKKVNMKKKEGPIASKTSKEKLEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVD 360
           K+K+NMKKKE P+A KT   +LE EVEKLKQQI KAKESS+KPP+ ALN MI+KLK+E+D
Sbjct: 413 KRKINMKKKEEPVAGKTPVLELEGEVEKLKQQIPKAKESSSKPPELALNEMIEKLKREID 472

Query: 361 HEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYAS 420
            EFSEA KAMG +++FATLR EF K NS+DQLM P LMDKI +LKNEF QGL++APN+ S
Sbjct: 473 LEFSEAVKAMGFKDRFATLREEFLKANSQDQLMHPGLMDKIEKLKNEFTQGLSAAPNFPS 532

Query: 421 LKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGA 480
           LKYKLDMLKEFS AK++ +  +K   LKQEINKK +EV+ +PD+KEKMEA++A++  SGA
Sbjct: 533 LKYKLDMLKEFSKAKNISEKNSKGLTLKQEINKKLKEVMDQPDMKEKMEALEAEVLRSGA 592

Query: 481 SSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKME 540
            +  +L+++ +E+++  ++EIE EL +  +SLGL+VE+VKSKAKEL EQT   +F++K+E
Sbjct: 593 YNEGELDEETRERIMSMRREIELELANVFKSLGLEVEIVKSKAKELGEQTPLLDFKAKVE 652

Query: 541 NLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAV 600
           NL E+ NKKIE +INSSDLK+MIELLKLE+AKAG KPDV SK KI+ALE QIKQRLS A+
Sbjct: 653 NLKEQTNKKIEGLINSSDLKNMIELLKLEVAKAGNKPDVTSKNKIEALEHQIKQRLSSAI 712

Query: 601 NSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINVGANRSFA 658
           NS+ELKEKHEEL  EIS+A +   GLDG + N+ +++  SK+DESRVEIN+GANR+FA
Sbjct: 713 NSTELKEKHEELKVEISEAAEFAAGLDGSLKNDDSREGVSKHDESRVEINLGANRTFA 770

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|259090632|gb|ACV91932.1| alpha-carboxyltransferase subunit [Jatropha curcas] Back     alignment and taxonomy information
>gi|255573891|ref|XP_002527864.1| carboxyl-tansferase, subunit of Het-ACCase [Ricinus communis] gi|223532715|gb|EEF34495.1| carboxyl-tansferase, subunit of Het-ACCase [Ricinus communis] Back     alignment and taxonomy information
>gi|156144962|gb|ABU53027.1| chloroplast acetyl-CoA carboxylase carboxyltransferase alpha subunit [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|156144960|gb|ABU53026.1| chloroplast acetyl-CoA carboxylase carboxyltransferase alpha subunit [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224138998|ref|XP_002322954.1| predicted protein [Populus trichocarpa] gi|222867584|gb|EEF04715.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359481689|ref|XP_002277825.2| PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic [Vitis vinifera] Back     alignment and taxonomy information
>gi|224087669|ref|XP_002308204.1| predicted protein [Populus trichocarpa] gi|222854180|gb|EEE91727.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|193290650|gb|ACF17633.1| putative acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit [Capsicum annuum] Back     alignment and taxonomy information
>gi|449506447|ref|XP_004162752.1| PREDICTED: LOW QUALITY PROTEIN: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query658
TAIR|locus:2065654769 CAC3 "acetyl Co-enzyme a carbo 0.984 0.842 0.583 2.8e-201
TIGR_CMR|CHY_1142323 CHY_1142 "acetyl-CoA carboxyla 0.446 0.910 0.413 4e-58
TIGR_CMR|GSU_1402313 GSU_1402 "acetyl-CoA carboxyla 0.442 0.929 0.405 1.7e-57
TIGR_CMR|BA_4845324 BA_4845 "acetyl-CoA carboxylas 0.431 0.876 0.411 1.3e-55
TIGR_CMR|CPS_1571318 CPS_1571 "acetyl-CoA carboxyla 0.431 0.893 0.404 2.6e-54
UNIPROTKB|Q9KPW8319 accA "Acetyl-coenzyme A carbox 0.439 0.905 0.394 2.4e-53
TIGR_CMR|VC_2244319 VC_2244 "acetyl-CoA carboxylas 0.439 0.905 0.394 2.4e-53
UNIPROTKB|P0ABD5319 accA [Escherichia coli K-12 (t 0.431 0.890 0.404 8e-53
TIGR_CMR|CJE_0495312 CJE_0495 "acetyl-CoA carboxyla 0.433 0.913 0.392 2.4e-51
TIGR_CMR|CBU_1510316 CBU_1510 "acetyl-CoA carboxyla 0.431 0.898 0.373 5.2e-49
TAIR|locus:2065654 CAC3 "acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1948 (690.8 bits), Expect = 2.8e-201, P = 2.8e-201
 Identities = 387/663 (58%), Positives = 486/663 (73%)

Query:     1 MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFV 60
             MAN+TGLDF++QI++LENKY+QALKDLYTHLTPIQRVNIARHPNRPTFLDH+ NIT+KF+
Sbjct:   117 MANETGLDFTEQIITLENKYRQALKDLYTHLTPIQRVNIARHPNRPTFLDHIHNITDKFM 176

Query:    61 ELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMM 120
             ELHGDRAGYDDPAIVTGIG++DG+ YMF+GHQKGRNTKENI RNFGMPTPHGYRKALRMM
Sbjct:   177 ELHGDRAGYDDPAIVTGIGTIDGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMM 236

Query:   121 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPXXXXXXXXXXXXX 180
             YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIA+NLRTMFGLKVP             
Sbjct:   237 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIANNLRTMFGLKVPILSIVIGEGGSGG 296

Query:   181 XXXXXCANKLLMLENAVFYVASPEACAAILWXXXXXXXXXXXXXXITGSELCKLQIADGV 240
                  CANK+LMLENAVFYVASPEACAAILW              IT  EL KL +ADG+
Sbjct:   297 ALAIGCANKMLMLENAVFYVASPEACAAILWKTSKAAPEAAEKLRITSKELVKLNVADGI 356

Query:   241 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDP 300
             IPEPLGGAHADPSWTSQQIKIAINE+M+E GKM  +ELLKHR  K+RKIG F EG PI+P
Sbjct:   357 IPEPLGGAHADPSWTSQQIKIAINENMNEFGKMSGEELLKHRMAKYRKIGVFIEGEPIEP 416

Query:   301 KKKVNMKKKEGPIASKTSXXXXXXXXXXXXQQILKAKESSTK--PPDAALNVMIQKLKKE 358
              +K+NMKK+E   +                +QILKAKE+ST+  P    LN MI+KLK E
Sbjct:   417 SRKINMKKREAVFSDSRKLQGEVDKLK---EQILKAKETSTEAEPSSEVLNEMIEKLKSE 473

Query:   359 VDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNY 418
             +D E++EAA A+G++E+   +R EFSK +S + LM P+L++KI +LK EFN  L  APNY
Sbjct:   474 IDDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEKIEKLKEEFNTRLTDAPNY 533

Query:   419 ASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDS 478
              SLK KL+ML++FS AK+     ++A  LK+EINK+F+E + RP+I+EK+EAIKA++  S
Sbjct:   534 ESLKSKLNMLRDFSRAKAA----SEATSLKKEINKRFQEAVDRPEIREKVEAIKAEVASS 589

Query:   479 GASSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQ--TSFSNFR 536
             GASSF +L D LKEK+++TK E+E+E+   L+S+GL+++ VK   K+ +EQ   +  N +
Sbjct:   590 GASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQKDTAEQIYAANENLQ 649

Query:   537 SKMXXXXXXXXXXXXDVINSSDLKDMIELLKLEIAKAGKKPDV-KSKCKIQALEQQIKQR 595
              K+            +V+ + ++K M+ELLK+E AKA K P V ++  KI+ALEQQIKQ+
Sbjct:   650 EKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEAYQKIEALEQQIKQK 709

Query:   596 LSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEINVGANR 655
             ++EA+N+S L+EK +EL  E++ A +       G   E   DD    +  + E+    N 
Sbjct:   710 IAEALNTSGLQEKQDELEKELAAARELAAEESDGSVKEDDDDDEDSSESGKSEM---VNP 766

Query:   656 SFA 658
             SFA
Sbjct:   767 SFA 769
GO:0003989 "acetyl-CoA carboxylase activity" evidence=IEA;ISS;NAS
GO:0006633 "fatty acid biosynthetic process" evidence=IEA;ISS
GO:0009317 "acetyl-CoA carboxylase complex" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016874 "ligase activity" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0006744 "ubiquinone biosynthetic process" evidence=RCA
GO:0009536 "plastid" evidence=IDA
TIGR_CMR|CHY_1142 CHY_1142 "acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1402 GSU_1402 "acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4845 BA_4845 "acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1571 CPS_1571 "acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPW8 accA "Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2244 VC_2244 "acetyl-CoA carboxylase, carboxyl transferase alpha subunit" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P0ABD5 accA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0495 CJE_0495 "acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1510 CBU_1510 "acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LD43ACCA_ARATH6, ., 4, ., 1, ., 20.67740.91940.7867yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.4.1.20.946
3rd Layer6.4.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00161050
SubName- Full=Putative uncharacterized protein; (760 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pg.C_scaffold_16349000001
Predicted protein (290 aa)
••• ••• 0.951
estExt_fgenesh4_pm.C_LG_VI0248
hypothetical protein (528 aa)
• •  •• 0.939
grail3.0164004802
hypothetical protein (526 aa)
• •  •• 0.939
estExt_fgenesh4_pg.C_LG_IX0832
[acyl-carrier protein] S-malonyltransferase (EC-2.3.1.39) (371 aa)
•    •• 0.930
gw1.XIX.2128.1
hypothetical protein (435 aa)
     •  0.899
gw1.V.3049.1
2-isopropylmalate synthase (EC-2.3.3.13) (545 aa)
     •  0.899
gw1.III.1824.1
hypothetical protein (176 aa)
     •  0.899
gw1.97.147.1
dihydrolipoamide acetyltransferase (448 aa)
     •  0.899
grail3.0024004101
acetyl-CoA C-acetyltransferase (EC-2.3.1.9) (412 aa)
     •  0.899
fgenesh4_pg.C_LG_XV000664
malate synthase (EC-2.3.3.9) (554 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
PLN03229762 PLN03229, PLN03229, acetyl-coenzyme A carboxylase 0.0
PLN03230431 PLN03230, PLN03230, acetyl-coenzyme A carboxylase 1e-174
PRK05724319 PRK05724, PRK05724, acetyl-CoA carboxylase carboxy 1e-157
COG0825317 COG0825, AccA, Acetyl-CoA carboxylase alpha subuni 1e-135
CHL00198322 CHL00198, accA, acetyl-CoA carboxylase carboxyltra 1e-128
TIGR00513316 TIGR00513, accA, acetyl-CoA carboxylase, carboxyl 1e-123
PRK12319256 PRK12319, PRK12319, acetyl-CoA carboxylase subunit 2e-82
pfam03255145 pfam03255, ACCA, Acetyl co-enzyme A carboxylase ca 1e-67
COG4799526 COG4799, COG4799, Acetyl-CoA carboxylase, carboxyl 1e-07
pfam01039487 pfam01039, Carboxyl_trans, Carboxyl transferase do 1e-07
PLN02820569 PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxyla 1e-05
COG0419 908 COG0419, SbcC, ATPase involved in DNA repair [DNA 4e-05
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 1e-04
COG1196 1163 COG1196, Smc, Chromosome segregation ATPases [Cell 2e-04
TIGR03134238 TIGR03134, malonate_gamma, malonate decarboxylase, 4e-04
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 0.001
COG0216 363 COG0216, PrfA, Protein chain release factor A [Tra 0.003
COG4799526 COG4799, COG4799, Acetyl-CoA carboxylase, carboxyl 0.004
>gnl|CDD|178768 PLN03229, PLN03229, acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional Back     alignment and domain information 
 Score = 1079 bits (2792), Expect = 0.0
 Identities = 494/650 (76%), Positives = 569/650 (87%), Gaps = 3/650 (0%)

Query: 1   MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFV 60
           MAN+TGLDFSDQI+SLE+KYQQALKDLYTHLTPIQRVNIARHPNRPTFLDH+FNIT+KFV
Sbjct: 116 MANETGLDFSDQIISLESKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHIFNITDKFV 175

Query: 61  ELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMM 120
           ELHGDRAGYDDPAIVTGIG++DG+ YMF+GHQKGRNTKENI RNFGMPTPHGYRKALRMM
Sbjct: 176 ELHGDRAGYDDPAIVTGIGTIDGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMM 235

Query: 121 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 180
           YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPI+SIVIGEGGSGG
Sbjct: 236 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIVSIVIGEGGSGG 295

Query: 181 ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGV 240
           ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKA+PKAAEKL+IT  ELC+LQIADG+
Sbjct: 296 ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKAAPKAAEKLRITAQELCRLQIADGI 355

Query: 241 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDP 300
           IPEPLGGAHADPSWTSQQIKIAINE+MDELGKMDT+ELLKHR LKFRKIGGFQEG+P+DP
Sbjct: 356 IPEPLGGAHADPSWTSQQIKIAINENMDELGKMDTEELLKHRMLKFRKIGGFQEGVPVDP 415

Query: 301 KKKVNMKKKEGPIASKTSKEKLEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVD 360
           ++KVNMKK+E   A KT   +LE EVEKLK+QILKAKESS+KP + ALN MI+KLKKE+D
Sbjct: 416 ERKVNMKKRE---AVKTPVRELEGEVEKLKEQILKAKESSSKPSELALNEMIEKLKKEID 472

Query: 361 HEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKITELKNEFNQGLASAPNYAS 420
            E++EA  AMG+QE+   LR EFSK NS+DQLM P+LM+KI +LK+EFN+ L+ APNY S
Sbjct: 473 LEYTEAVIAMGLQERLENLREEFSKANSQDQLMHPVLMEKIEKLKDEFNKRLSRAPNYLS 532

Query: 421 LKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGA 480
           LKYKLDML EFS AK+L + K+KA KLK EINKKF+EV+ RP+IKEKMEA+KA++  SGA
Sbjct: 533 LKYKLDMLNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRPEIKEKMEALKAEVASSGA 592

Query: 481 SSFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKME 540
           SS  +L+DDLKEK+ + KKEIE EL   L+S+GL+V  V  K K+ +EQT   N + K+E
Sbjct: 593 SSGDELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDTAEQTPPPNLQEKIE 652

Query: 541 NLNEEINKKIEDVINSSDLKDMIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAV 600
           +LNEEINKKIE VI SSDLK  IELLKLE+AKA K PDV  K KI+ALEQQIKQ+++EA+
Sbjct: 653 SLNEEINKKIERVIRSSDLKSKIELLKLEVAKASKTPDVTEKEKIEALEQQIKQKIAEAL 712

Query: 601 NSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSKYDESRVEIN 650
           NSSELKEK EEL AE++ A ++    +G + N+  K++ SK D SRVE+N
Sbjct: 713 NSSELKEKFEELEAELAAARETAAESNGSLKNDDDKEEDSKEDGSRVEVN 762

Length = 762
>gnl|CDD|178769 PLN03230, PLN03230, acetyl-coenzyme A carboxylase carboxyl transferase; Provisional Back     alignment and domain information
>gnl|CDD|235580 PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated Back     alignment and domain information
>gnl|CDD|223895 COG0825, AccA, Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|214393 CHL00198, accA, acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional Back     alignment and domain information
>gnl|CDD|233004 TIGR00513, accA, acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Back     alignment and domain information
>gnl|CDD|183435 PRK12319, PRK12319, acetyl-CoA carboxylase subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|217457 pfam03255, ACCA, Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Back     alignment and domain information
>gnl|CDD|227136 COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|216259 pfam01039, Carboxyl_trans, Carboxyl transferase domain Back     alignment and domain information
>gnl|CDD|178415 PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|234116 TIGR03134, malonate_gamma, malonate decarboxylase, gamma subunit Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|223294 COG0216, PrfA, Protein chain release factor A [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|227136 COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 658
PLN03229762 acetyl-coenzyme A carboxylase carboxyl transferase 100.0
PLN03230431 acetyl-coenzyme A carboxylase carboxyl transferase 100.0
COG0825317 AccA Acetyl-CoA carboxylase alpha subunit [Lipid m 100.0
CHL00198322 accA acetyl-CoA carboxylase carboxyltransferase al 100.0
PRK05724319 acetyl-CoA carboxylase carboxyltransferase subunit 100.0
TIGR00513316 accA acetyl-CoA carboxylase, carboxyl transferase, 100.0
PRK12319256 acetyl-CoA carboxylase subunit alpha; Provisional 100.0
PLN03229762 acetyl-coenzyme A carboxylase carboxyl transferase 100.0
TIGR01117512 mmdA methylmalonyl-CoA decarboxylase alpha subunit 100.0
COG4799526 Acetyl-CoA carboxylase, carboxyltransferase compon 100.0
PF01039493 Carboxyl_trans: Carboxyl transferase domain; Inter 100.0
TIGR03134238 malonate_gamma malonate decarboxylase, gamma subun 100.0
PLN02820569 3-methylcrotonyl-CoA carboxylase, beta chain 100.0
PRK05654292 acetyl-CoA carboxylase subunit beta; Validated 100.0
TIGR00515285 accD acetyl-CoA carboxylase, carboxyl transferase, 100.0
KOG0540536 consensus 3-Methylcrotonyl-CoA carboxylase, non-bi 99.98
PF03255145 ACCA: Acetyl co-enzyme A carboxylase carboxyltrans 99.97
CHL00174296 accD acetyl-CoA carboxylase beta subunit; Reviewed 99.96
TIGR03133274 malonate_beta malonate decarboxylase, beta subunit 99.96
PRK07189301 malonate decarboxylase subunit beta; Reviewed 99.95
PLN02820569 3-methylcrotonyl-CoA carboxylase, beta chain 99.95
COG0777294 AccD Acetyl-CoA carboxylase beta subunit [Lipid me 99.94
TIGR01117512 mmdA methylmalonyl-CoA decarboxylase alpha subunit 99.93
COG4799526 Acetyl-CoA carboxylase, carboxyltransferase compon 99.92
PF01039493 Carboxyl_trans: Carboxyl transferase domain; Inter 99.9
KOG0540536 consensus 3-Methylcrotonyl-CoA carboxylase, non-bi 99.8
PF06833234 MdcE: Malonate decarboxylase gamma subunit (MdcE); 99.79
KOG0016266 consensus Enoyl-CoA hydratase/isomerase [Lipid tra 99.4
PRK06023251 enoyl-CoA hydratase; Provisional 99.3
PF00378245 ECH: Enoyl-CoA hydratase/isomerase family; InterPr 99.29
PRK08150255 enoyl-CoA hydratase; Provisional 99.29
TIGR02280256 PaaB1 phenylacetate degradation probable enoyl-CoA 99.28
PRK08140262 enoyl-CoA hydratase; Provisional 99.28
KOG03682196 consensus Acetyl-CoA carboxylase [Lipid transport 99.27
PRK06142272 enoyl-CoA hydratase; Provisional 99.26
PRK09120275 p-hydroxycinnamoyl CoA hydratase/lyase; Validated 99.25
PLN02664275 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA 99.25
PRK05862257 enoyl-CoA hydratase; Provisional 99.24
PRK06563255 enoyl-CoA hydratase; Provisional 99.23
PRK05995262 enoyl-CoA hydratase; Provisional 99.23
PRK07260255 enoyl-CoA hydratase; Provisional 99.23
PRK09674255 enoyl-CoA hydratase-isomerase; Provisional 99.23
PRK06143256 enoyl-CoA hydratase; Provisional 99.23
PRK07511260 enoyl-CoA hydratase; Provisional 99.23
PRK05869222 enoyl-CoA hydratase; Validated 99.23
PRK08258277 enoyl-CoA hydratase; Provisional 99.22
PRK05981266 enoyl-CoA hydratase; Provisional 99.22
PRK07327268 enoyl-CoA hydratase; Provisional 99.22
TIGR03210256 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb 99.22
PRK07468262 enoyl-CoA hydratase; Provisional 99.22
PRK11423261 methylmalonyl-CoA decarboxylase; Provisional 99.21
PRK05674265 gamma-carboxygeranoyl-CoA hydratase; Validated 99.21
PRK09076258 enoyl-CoA hydratase; Provisional 99.21
PRK06688259 enoyl-CoA hydratase; Provisional 99.2
PRK07657260 enoyl-CoA hydratase; Provisional 99.2
PRK09245266 enoyl-CoA hydratase; Provisional 99.2
PRK06127269 enoyl-CoA hydratase; Provisional 99.2
PRK06190258 enoyl-CoA hydratase; Provisional 99.19
PRK05980260 enoyl-CoA hydratase; Provisional 99.19
PRK05809260 3-hydroxybutyryl-CoA dehydratase; Validated 99.19
PRK07659260 enoyl-CoA hydratase; Provisional 99.19
PRK08252254 enoyl-CoA hydratase; Provisional 99.19
PRK07110249 polyketide biosynthesis enoyl-CoA hydratase; Valid 99.18
PRK03580261 carnitinyl-CoA dehydratase; Provisional 99.18
PLN02600251 enoyl-CoA hydratase 99.18
PRK08138261 enoyl-CoA hydratase; Provisional 99.18
TIGR01929259 menB naphthoate synthase (dihydroxynaphthoic acid 99.18
PRK07854243 enoyl-CoA hydratase; Provisional 99.17
PRK07658257 enoyl-CoA hydratase; Provisional 99.16
PRK08260296 enoyl-CoA hydratase; Provisional 99.16
PRK08139266 enoyl-CoA hydratase; Validated 99.16
PRK06144262 enoyl-CoA hydratase; Provisional 99.16
PRK06213229 enoyl-CoA hydratase; Provisional 99.16
PRK06494259 enoyl-CoA hydratase; Provisional 99.15
PRK05864276 enoyl-CoA hydratase; Provisional 99.15
PRK08259254 enoyl-CoA hydratase; Provisional 99.14
PRK07799263 enoyl-CoA hydratase; Provisional 99.14
PRK07396273 dihydroxynaphthoic acid synthetase; Validated 99.14
TIGR03189251 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy 99.12
PRK06495257 enoyl-CoA hydratase; Provisional 99.12
PLN02888265 enoyl-CoA hydratase 99.12
PRK07509262 enoyl-CoA hydratase; Provisional 99.11
PRK08272302 enoyl-CoA hydratase; Provisional 99.11
PRK05870249 enoyl-CoA hydratase; Provisional 99.11
PRK08321302 naphthoate synthase; Validated 99.11
PRK06210272 enoyl-CoA hydratase; Provisional 99.1
PRK07112255 polyketide biosynthesis enoyl-CoA hydratase; Valid 99.1
PLN03214278 probable enoyl-CoA hydratase/isomerase; Provisiona 99.1
cd07020187 Clp_protease_NfeD_1 Nodulation formation efficienc 99.09
PRK07827260 enoyl-CoA hydratase; Provisional 99.08
PLN02921327 naphthoate synthase 99.08
COG1024257 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi 99.05
PRK07938249 enoyl-CoA hydratase; Provisional 99.05
PRK08788287 enoyl-CoA hydratase; Validated 99.04
PRK08290288 enoyl-CoA hydratase; Provisional 99.03
cd06558195 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy 99.02
PRK06072248 enoyl-CoA hydratase; Provisional 99.0
PRK05617342 3-hydroxyisobutyryl-CoA hydrolase; Provisional 98.99
PRK12478298 enoyl-CoA hydratase; Provisional 98.98
PLN02267239 enoyl-CoA hydratase/isomerase family protein 98.95
KOG1680290 consensus Enoyl-CoA hydratase [Lipid transport and 98.95
PLN02157401 3-hydroxyisobutyryl-CoA hydrolase-like protein 98.9
TIGR03200360 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy 98.88
PLN02874379 3-hydroxyisobutyryl-CoA hydrolase-like protein 98.87
cd07021178 Clp_protease_NfeD_like Nodulation formation effici 98.86
cd07014177 S49_SppA Signal peptide peptidase A. Signal peptid 98.84
PLN02851407 3-hydroxyisobutyryl-CoA hydrolase-like protein 98.82
PRK11730 715 fadB multifunctional fatty acid oxidation complex 98.8
cd07015172 Clp_protease_NfeD Nodulation formation efficiency 98.79
PLN02988381 3-hydroxyisobutyryl-CoA hydrolase 98.79
cd07016160 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP- 98.76
PRK08184550 benzoyl-CoA-dihydrodiol lyase; Provisional 98.69
TIGR02441 737 fa_ox_alpha_mit fatty acid oxidation complex, alph 98.65
TIGR03222546 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p 98.65
TIGR03222546 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p 98.61
TIGR02437 714 FadB fatty oxidation complex, alpha subunit FadB. 98.6
TIGR02440699 FadJ fatty oxidation complex, alpha subunit FadJ. 98.57
PRK11154 708 fadJ multifunctional fatty acid oxidation complex 98.57
cd00394161 Clp_protease_like Caseinolytic protease (ClpP) is 98.55
PRK08184550 benzoyl-CoA-dihydrodiol lyase; Provisional 98.55
COG0447282 MenB Dihydroxynaphthoic acid synthase [Coenzyme me 98.37
PRK12553207 ATP-dependent Clp protease proteolytic subunit; Re 98.37
PRK00277200 clpP ATP-dependent Clp protease proteolytic subuni 98.33
cd07022214 S49_Sppa_36K_type Signal peptide peptidase A (SppA 98.29
cd07013162 S14_ClpP Caseinolytic protease (ClpP) is an ATP-de 98.24
PRK14512197 ATP-dependent Clp protease proteolytic subunit; Pr 98.23
TIGR00706207 SppA_dom signal peptide peptidase SppA, 36K type. 98.19
cd07018222 S49_SppA_67K_type Signal peptide peptidase A (SppA 98.18
CHL00028200 clpP ATP-dependent Clp protease proteolytic subuni 98.13
PF00574182 CLP_protease: Clp protease; InterPro: IPR001907 In 98.09
cd07017171 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP- 98.08
TIGR00493191 clpP ATP-dependent Clp protease, proteolytic subun 98.08
cd07023208 S49_Sppa_N_C Signal peptide peptidase A (SppA), a 98.08
PRK14514221 ATP-dependent Clp protease proteolytic subunit; Pr 98.06
PRK12551196 ATP-dependent Clp protease proteolytic subunit; Re 98.04
COG1030436 NfeD Membrane-bound serine protease (ClpP class) [ 98.0
PRK14513201 ATP-dependent Clp protease proteolytic subunit; Pr 97.91
TIGR00705584 SppA_67K signal peptide peptidase SppA, 67K type. 97.9
cd07019211 S49_SppA_1 Signal peptide peptidase A (SppA), a se 97.9
KOG1682287 consensus Enoyl-CoA isomerase [Lipid transport and 97.79
PF01972285 SDH_sah: Serine dehydrogenase proteinase; InterPro 97.65
COG0616317 SppA Periplasmic serine proteases (ClpP class) [Po 97.63
COG0740200 ClpP Protease subunit of ATP-dependent Clp proteas 97.55
PRK12552222 ATP-dependent Clp protease-like protein; Reviewed 97.53
PRK11778330 putative inner membrane peptidase; Provisional 97.36
KOG1681292 consensus Enoyl-CoA isomerase [Lipid transport and 97.35
KOG0840275 consensus ATP-dependent Clp protease, proteolytic 97.2
KOG03682196 consensus Acetyl-CoA carboxylase [Lipid transport 97.19
PRK10949618 protease 4; Provisional 96.67
KOG1679291 consensus Enoyl-CoA hydratase [Lipid transport and 96.29
KOG1684401 consensus Enoyl-CoA hydratase [Lipid transport and 96.18
PF01343154 Peptidase_S49: Peptidase family S49 peptidase clas 95.96
TIGR00705584 SppA_67K signal peptide peptidase SppA, 67K type. 95.19
PRK10949618 protease 4; Provisional 94.62
PF06160 560 EzrA: Septation ring formation regulator, EzrA ; I 93.99
PRK01156 895 chromosome segregation protein; Provisional 93.48
PF07798177 DUF1640: Protein of unknown function (DUF1640); In 93.03
PRK03918 880 chromosome segregation protein; Provisional 92.69
PRK04778569 septation ring formation regulator EzrA; Provision 91.27
PRK04778 569 septation ring formation regulator EzrA; Provision 90.38
PF07888546 CALCOCO1: Calcium binding and coiled-coil domain ( 89.94
PF10498359 IFT57: Intra-flagellar transport protein 57 ; Inte 89.61
PRK01156 895 chromosome segregation protein; Provisional 89.14
KOG0996 1293 consensus Structural maintenance of chromosome pro 89.05
TIGR02169 1164 SMC_prok_A chromosome segregation protein SMC, pri 89.05
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 88.65
COG1196 1163 Smc Chromosome segregation ATPases [Cell division 88.53
PF00038312 Filament: Intermediate filament protein; InterPro: 88.28
PRK03918 880 chromosome segregation protein; Provisional 88.14
TIGR00606 1311 rad50 rad50. This family is based on the phylogeno 87.05
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 86.75
KOG4643 1195 consensus Uncharacterized coiled-coil protein [Fun 86.0
PF07798177 DUF1640: Protein of unknown function (DUF1640); In 85.55
smart00787312 Spc7 Spc7 kinetochore protein. This domain is foun 85.43
PF07464155 ApoLp-III: Apolipophorin-III precursor (apoLp-III) 83.75
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 82.25
PF15450531 DUF4631: Domain of unknown function (DUF4631) 82.0
KOG0996 1293 consensus Structural maintenance of chromosome pro 80.68
COG1196 1163 Smc Chromosome segregation ATPases [Cell division 80.26
PLN02939 977 transferase, transferring glycosyl groups 80.06
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.7e-161  Score=1344.90  Aligned_cols=646  Identities=76%  Similarity=1.123  Sum_probs=637.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhccCChhhHhhhcCCCCCCCHHHHHhhhcccceEccCCCCCCCCCceEEEEEEE
Q 006153            2 ANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSM   81 (658)
Q Consensus         2 ~~~~~~~~~~~i~~le~~~~~~~~~i~~~lt~werv~~ar~~~Rp~are~I~~L~D~F~EL~gd~~~~dD~aVVtG~GrI   81 (658)
                      +..+++|++++|..|+.++.++++++|++||||+||+++|||+||+++|||..+||+|+|+||+|+|+||++||||+|+|
T Consensus       117 ~~~~~~~~~~ei~~Le~k~~~~~~~iy~~LT~werV~~aR~p~RP~~~Dyi~~i~ddf~EL~Gdr~~~dD~aIVtGlGRI  196 (762)
T PLN03229        117 ANETGLDFSDQIISLESKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHIFNITDKFVELHGDRAGYDDPAIVTGIGTI  196 (762)
T ss_pred             hhcccccHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCcccCCCCCCeEEEEEEE
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEEeeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCChhHHHhchHHHHHHHHHHH
Q 006153           82 DGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTM  161 (658)
Q Consensus        82 ~GrpV~VIa~d~~~~~~e~~~~~gGsl~p~g~rKa~R~i~lAdk~~lPIV~LiDTpGa~~g~~aE~~Gq~~aiA~~l~al  161 (658)
                      +|+||+|||||+|+++++++.++||+++|.+|+|++|+|++|++|++|||+|+|||||++|.++|..|+++++++++.++
T Consensus       197 dGrpV~VIAndkg~~tke~~~rnfG~~~peGyRKAlRlmkLAekfgLPIVtLVDTpGA~pG~~AEe~Gq~~aIArnl~am  276 (762)
T PLN03229        197 DGKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTM  276 (762)
T ss_pred             CCEEEEEEEecCCccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCcCCCchhHHHhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCEEEEEcCCCchhhhhhhccccEEEEEcCceEEEeCHHHHHHHhhhhccCchHHHHhhcccHHHHHHcCCceeee
Q 006153          162 FGLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVI  241 (658)
Q Consensus       162 s~a~VPiISVViG~a~GGGAlalg~aD~ViA~p~A~i~VmgPEgaAsIl~rd~~~~~eAaE~~kitA~dL~~~GlVD~II  241 (658)
                      +..+||+||||+|+|+|||||++++||+||||++|+|+|+||++||+|+|++..++++||+.+++||.+|+++|+||+||
T Consensus       277 asl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~sVisPEgaAsILwkd~~~A~eAAe~lkiTa~dL~~lGiiD~II  356 (762)
T PLN03229        277 FGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKAAPKAAEKLRITAQELCRLQIADGII  356 (762)
T ss_pred             hCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEEecCHHHHHHHHhcCcccHHHHHHHcCCCHHHHHhCCCCeeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCCCCCCCCCccccccccccCCCCCCCCChhh
Q 006153          242 PEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQEGIPIDPKKKVNMKKKEGPIASKTSKEK  321 (658)
Q Consensus       242 pe~~ggah~dp~~tr~~L~~aL~~~L~eL~~l~~~~ll~~R~~k~r~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (658)
                      |||+||||+||..+...|+.+|..+|.+|..+|+++|+.+||+|||+||.|.++.|+||+||+|||++|+++   +|+.+
T Consensus       357 pEp~ggAh~d~~~~~~~l~~~i~~~L~~l~~~~~~~l~~~R~~kfr~~G~~~e~~~~~~~~~~~~~~~~~~~---~~~~~  433 (762)
T PLN03229        357 PEPLGGAHADPSWTSQQIKIAINENMDELGKMDTEELLKHRMLKFRKIGGFQEGVPVDPERKVNMKKREAVK---TPVRE  433 (762)
T ss_pred             cCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhCCcccCCCCChhhhcccchhccCC---CCCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999988   89999


Q ss_pred             hHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHhhHHHHHHHHHcCcHHHHHHHHHHhccCCCCCCCCChHHHHHH
Q 006153          322 LEDEVEKLKQQILKAKESSTKPPDAALNVMIQKLKKEVDHEFSEAAKAMGMQEKFATLRAEFSKGNSRDQLMDPILMDKI  401 (658)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (658)
                      |++||++||+||++||+|++.|++++|++||+||++|+|||||+|+++|||++||.+||+||||||++||+|||+|++|+
T Consensus       434 Le~elekLk~eilKAk~s~~~~~~~~L~e~IeKLk~E~d~e~S~A~~~~gLk~kL~~Lr~E~sKa~~~~~~~~~~L~eK~  513 (762)
T PLN03229        434 LEGEVEKLKEQILKAKESSSKPSELALNEMIEKLKKEIDLEYTEAVIAMGLQERLENLREEFSKANSQDQLMHPVLMEKI  513 (762)
T ss_pred             HHHHHHHHHHHHHhcccccCCCCChHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhcccccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCChhhHHHHHHHhhhhccccccchhHHHHHHHHHHHHHHhHHhhcCcchHHHHHHHHHHHhhcCCC
Q 006153          402 TELKNEFNQGLASAPNYASLKYKLDMLKEFSNAKSLLDSKNKAAKLKQEINKKFEEVICRPDIKEKMEAIKAKLQDSGAS  481 (658)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~Lk~ki~~~ke~s~~~~~~~~~~~~~~Lk~Ei~~~~~ea~~~~~lkek~~~lk~E~~k~~~s  481 (658)
                      ++||+||||+|++||||++||+|++|||++++++.+++.+++..+|++|||++|.|+|++|++++||+++++||.++|+|
T Consensus       514 ~kLk~Efnkkl~ea~n~p~lk~Kle~Lk~~~~~~~~s~g~~~a~~Lk~ei~kki~e~~~~~~~kek~ea~~aev~~~g~s  593 (762)
T PLN03229        514 EKLKDEFNKRLSRAPNYLSLKYKLDMLNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRPEIKEKMEALKAEVASSGAS  593 (762)
T ss_pred             HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhhhhcccchhhhhhhHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCcc
Confidence            99999999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHhhcCcchhHhhhhhHHhhhccccchhhhhHHHHHHHHHHHHHHhhccchhHH
Q 006153          482 SFSDLEDDLKEKLVETKKEIESELIDGLESLGLDVEVVKSKAKELSEQTSFSNFRSKMENLNEEINKKIEDVINSSDLKD  561 (658)
Q Consensus       482 ~~~~l~~~Lkeki~k~k~E~~~~l~~~~~sl~~~~~~~~~~~k~~~~~~~~~~~~~k~~~l~~ei~kki~~~~~~~~ik~  561 (658)
                      ++.++|++||+||+++|+|++.+|+.|++|+|+++..+..+.+...+++|++++++||++||+||+|+|+++||+|+||+
T Consensus       594 ~~~~~~~~lkeki~~~~~Ei~~eie~v~~S~gL~~~~~~k~e~a~~~~~p~~~~k~KIe~L~~eIkkkIe~av~ss~LK~  673 (762)
T PLN03229        594 SGDELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDTAEQTPPPNLQEKIESLNEEINKKIERVIRSSDLKS  673 (762)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhhhhhcccccCCChhhHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence            99999999999999999999999999999999999999989999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCChhhHHHHHHHHHHHHHHHHHHcCChhhHHHHHHHHHHHhhccCCCCCCCCCccCCCCCCCCCC
Q 006153          562 MIELLKLEIAKAGKKPDVKSKCKIQALEQQIKQRLSEAVNSSELKEKHEELMAEISDATKSPGGLDGGVNNEHAKDDSSK  641 (658)
Q Consensus       562 kiE~LK~Ev~~ag~~p~~~~k~kie~l~~~I~~~i~~a~~ss~lk~k~E~Lk~e~a~~~~~~~~~~~s~~~~~~~~~~~~  641 (658)
                      |||+||+||+++|.|||.++|+|||+|+|||+|+|.+|||||+||+|||+|+.|++.+.++..++|||+++||+++++++
T Consensus       674 k~E~Lk~Evaka~~~pd~~~k~kieal~~qik~~~~~a~~~~~lkek~e~l~~e~~~~~~~~~~~~g~~~~~~~~~~~~~  753 (762)
T PLN03229        674 KIELLKLEVAKASKTPDVTEKEKIEALEQQIKQKIAEALNSSELKEKFEELEAELAAARETAAESNGSLKNDDDKEEDSK  753 (762)
T ss_pred             HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHhccHhHHHHHHHHHHHHHHhhcccccccCCccCCCccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ccccceeee
Q 006153          642 YDESRVEIN  650 (658)
Q Consensus       642 ~~~~~~~~~  650 (658)
                      ++++++|||
T Consensus       754 ~~~~~~~~n  762 (762)
T PLN03229        754 EDGSRVEVN  762 (762)
T ss_pred             cccccccCC
Confidence            999999987

>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional Back     alignment and domain information
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] Back     alignment and domain information
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional Back     alignment and domain information
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated Back     alignment and domain information
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Back     alignment and domain information
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional Back     alignment and domain information
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional Back     alignment and domain information
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit Back     alignment and domain information
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] Back     alignment and domain information
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] Back     alignment and domain information
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit Back     alignment and domain information
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated Back     alignment and domain information
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit Back     alignment and domain information
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism] Back     alignment and domain information
>PF03255 ACCA: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; InterPro: IPR001095 This entry contains the alpha subunit the acetyl coenzyme A carboxylase complex (6 Back     alignment and domain information
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed Back     alignment and domain information
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit Back     alignment and domain information
>PRK07189 malonate decarboxylase subunit beta; Reviewed Back     alignment and domain information
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] Back     alignment and domain information
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit Back     alignment and domain information
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] Back     alignment and domain information
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] Back     alignment and domain information
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism] Back     alignment and domain information
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins Back     alignment and domain information
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06023 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix Back     alignment and domain information
>PRK08150 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB Back     alignment and domain information
>PRK08140 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06142 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated Back     alignment and domain information
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase Back     alignment and domain information
>PRK05862 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06563 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05995 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07260 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional Back     alignment and domain information
>PRK06143 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07511 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05869 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK08258 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05981 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07327 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase Back     alignment and domain information
>PRK07468 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional Back     alignment and domain information
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK09076 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06688 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07657 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09245 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06127 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06190 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05980 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated Back     alignment and domain information
>PRK07659 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08252 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK03580 carnitinyl-CoA dehydratase; Provisional Back     alignment and domain information
>PLN02600 enoyl-CoA hydratase Back     alignment and domain information
>PRK08138 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase) Back     alignment and domain information
>PRK07854 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07658 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08260 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08139 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK06144 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06213 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06494 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05864 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08259 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07799 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07396 dihydroxynaphthoic acid synthetase; Validated Back     alignment and domain information
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase Back     alignment and domain information
>PRK06495 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02888 enoyl-CoA hydratase Back     alignment and domain information
>PRK07509 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08272 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05870 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08321 naphthoate synthase; Validated Back     alignment and domain information
>PRK06210 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated Back     alignment and domain information
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional Back     alignment and domain information
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>PRK07827 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02921 naphthoate synthase Back     alignment and domain information
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] Back     alignment and domain information
>PRK07938 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08788 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK08290 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily Back     alignment and domain information
>PRK06072 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional Back     alignment and domain information
>PRK12478 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02267 enoyl-CoA hydratase/isomerase family protein Back     alignment and domain information
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase Back     alignment and domain information
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>cd07014 S49_SppA Signal peptide peptidase A Back     alignment and domain information
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase Back     alignment and domain information
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional Back     alignment and domain information
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase Back     alignment and domain information
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ Back     alignment and domain information
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease Back     alignment and domain information
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional Back     alignment and domain information
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type Back     alignment and domain information
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit Back     alignment and domain information
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP Back     alignment and domain information
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type Back     alignment and domain information
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] Back     alignment and domain information
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily Back     alignment and domain information
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed Back     alignment and domain information
>PRK11778 putative inner membrane peptidase; Provisional Back     alignment and domain information
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] Back     alignment and domain information
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism] Back     alignment and domain information
>PRK10949 protease 4; Provisional Back     alignment and domain information
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification Back     alignment and domain information
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type Back     alignment and domain information
>PRK10949 protease 4; Provisional Back     alignment and domain information
>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>PF07798 DUF1640: Protein of unknown function (DUF1640); InterPro: IPR024461 This family consists of uncharacterised proteins Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PRK04778 septation ring formation regulator EzrA; Provisional Back     alignment and domain information
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) Back     alignment and domain information
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>TIGR00606 rad50 rad50 Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] Back     alignment and domain information
>PF07798 DUF1640: Protein of unknown function (DUF1640); InterPro: IPR024461 This family consists of uncharacterised proteins Back     alignment and domain information
>smart00787 Spc7 Spc7 kinetochore protein Back     alignment and domain information
>PF07464 ApoLp-III: Apolipophorin-III precursor (apoLp-III); InterPro: IPR010009 This family consists of several insect apolipoprotein-III sequences Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PF15450 DUF4631: Domain of unknown function (DUF4631) Back     alignment and domain information
>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
2f9i_A327 Crystal Structure Of The Carboxyltransferase Subuni 5e-62
2f9y_A339 The Crystal Structure Of The Carboxyltransferase Su 9e-58
>pdb|2F9I|A Chain A, Crystal Structure Of The Carboxyltransferase Subunit Of Acc From Staphylococcus Aureus Length = 327 Back     alignment and structure 
Iteration: 1

 Score =  235 bits (600), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 126/288 (43%), Positives = 162/288 (56%)
Query: 7   LDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDR 66
           +D  ++I  LE   ++  K +YT+L P  RV IAR   RPT LD++  I + F+ELHGDR
Sbjct: 40  VDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDR 99
Query: 67  AGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHH 126
              DDPA++ GIG ++GR    +G Q+G++TK+NI RNFGM  P GYRKALR+M  A+  
Sbjct: 100 NFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKF 159
Query: 127 GFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPXXXXXXXXXXXXXXXXXXC 186
             PI TFIDT GAY    +EE GQ E+IA NL  M  LKVP                   
Sbjct: 160 NRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGI 219
Query: 187 ANKLLMLENAVFYVASPEACAAILWXXXXXXXXXXXXXXITGSELCKLQIADGVIPEPLG 246
           ANK+LMLEN+ + V SPE  AA+LW              IT  ++ +L I D VI EPLG
Sbjct: 220 ANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLG 279
Query: 247 GAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQE 294
           GAH D    +  IK A    +D L  +   E+   R  KFR IG + E
Sbjct: 280 GAHKDIEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE 327
>pdb|2F9Y|A Chain A, The Crystal Structure Of The Carboxyltransferase Subunit Of Acc From Escherichia Coli Length = 339 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
2f9i_A327 Acetyl-coenzyme A carboxylase carboxyl transferase 1e-164
2f9y_A339 Acetyl-COA carboxylase, carboxyltransferase alpha; 1e-161
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1pix_A587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 3e-08
1pix_A587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 4e-04
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 8e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-07
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 7e-07
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 4e-05
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 1e-06
3gf3_A588 Glutaconyl-COA decarboxylase subunit A; sodium ION 9e-06
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 2e-04
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 6e-04
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Length = 327 Back     alignment and structure
 Score =  472 bits (1218), Expect = e-164
 Identities = 146/294 (49%), Positives = 188/294 (63%)

Query: 1   MANDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFV 60
             +   +D  ++I  LE   ++  K +YT+L P  RV IAR   RPT LD++  I + F+
Sbjct: 34  SQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFM 93

Query: 61  ELHGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMM 120
           ELHGDR   DDPA++ GIG ++GR    +G Q+G++TK+NI RNFGM  P GYRKALR+M
Sbjct: 94  ELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLM 153

Query: 121 YYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGG 180
             A+    PI TFIDT GAY    +EE GQ E+IA NL  M  LKVP+I+IVIGEGGSGG
Sbjct: 154 KQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGG 213

Query: 181 ALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGV 240
           AL IG ANK+LMLEN+ + V SPE  AA+LWK +  +  AAE +KIT  ++ +L I D V
Sbjct: 214 ALGIGIANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDV 273

Query: 241 IPEPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQE 294
           I EPLGGAH D    +  IK A    +D L  +   E+   R  KFR IG + E
Sbjct: 274 ISEPLGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE 327
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Length = 339 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Length = 587 Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Length = 587 Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Length = 555 Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Length = 588 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query658
2f9i_A327 Acetyl-coenzyme A carboxylase carboxyl transferase 100.0
2f9y_A339 Acetyl-COA carboxylase, carboxyltransferase alpha; 100.0
1pix_A587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 100.0
1on3_A523 Methylmalonyl-COA carboxyltransferase 12S subunit; 100.0
1vrg_A527 Propionyl-COA carboxylase, beta subunit; TM0716, s 100.0
3n6r_B531 Propionyl-COA carboxylase, beta subunit; protein c 100.0
2bzr_A548 Propionyl-COA carboxylase beta chain 5; fatty acid 100.0
3iav_A530 Propionyl-COA carboxylase complex B subunit; accas 100.0
3gf3_A588 Glutaconyl-COA decarboxylase subunit A; sodium ION 100.0
1x0u_A522 Hypothetical methylmalonyl-COA decarboxylase ALPH; 100.0
2f9i_B285 Acetyl-coenzyme A carboxylase carboxyl transferase 100.0
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 100.0
2x24_A793 Acetyl-COA carboxylase; fatty acid biosynthesis, l 100.0
2f9y_B304 Acetyl-coenzyme A carboxylase carboxyl transferas 100.0
3k8x_A758 Acetyl-COA carboxylase; transferase, carboxyltrans 100.0
1pix_A587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 99.96
1vrg_A527 Propionyl-COA carboxylase, beta subunit; TM0716, s 99.96
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 99.96
3n6r_B531 Propionyl-COA carboxylase, beta subunit; protein c 99.96
3iav_A530 Propionyl-COA carboxylase complex B subunit; accas 99.96
1on3_A523 Methylmalonyl-COA carboxyltransferase 12S subunit; 99.95
2bzr_A548 Propionyl-COA carboxylase beta chain 5; fatty acid 99.95
1x0u_A522 Hypothetical methylmalonyl-COA decarboxylase ALPH; 99.95
3gf3_A588 Glutaconyl-COA decarboxylase subunit A; sodium ION 99.95
2x24_A793 Acetyl-COA carboxylase; fatty acid biosynthesis, l 99.86
3k8x_A758 Acetyl-COA carboxylase; transferase, carboxyltrans 99.79
2a7k_A250 CARB; crotonase, antibiotic, beta-lactam, biosynth 99.29
2fbm_A291 Y chromosome chromodomain protein 1, telomeric IS; 99.28
3hrx_A254 Probable enoyl-COA hydratase; the spiral fold, the 99.28
2gtr_A261 CDY-like, chromodomain Y-like protein; structural 99.27
3gow_A254 PAAG, probable enoyl-COA hydratase; the spiral fol 99.26
3r6h_A233 Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m 99.26
3i47_A268 Enoyl COA hydratase/isomerase (crotonase); structu 99.25
4fzw_C274 1,2-epoxyphenylacetyl-COA isomerase; structural ge 99.25
2f6q_A280 Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis 99.25
3lke_A263 Enoyl-COA hydratase; nysgrc, target 112 structural 99.25
1dci_A275 Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg 99.25
3fdu_A266 Putative enoyl-COA hydratase/isomerase; structural 99.24
1uiy_A253 Enoyl-COA hydratase; lyase, beta-oxidation, croton 99.24
4fzw_A258 2,3-dehydroadipyl-COA hydratase; structural genomi 99.22
3g64_A279 Putative enoyl-COA hydratase; alpha-beta structure 99.22
3pea_A261 Enoyl-COA hydratase/isomerase family protein; stru 99.22
3p5m_A255 Enoyl-COA hydratase/isomerase; seattle structural 99.22
3qmj_A256 Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, 99.21
2ej5_A257 Enoyl-COA hydratase subunit II; structural genomic 99.21
4di1_A277 Enoyl-COA hydratase ECHA17; structural genomics, s 99.21
3kqf_A265 Enoyl-COA hydratase/isomerase family protein; IDP0 99.21
3sll_A290 Probable enoyl-COA hydratase/isomerase; structural 99.2
3isa_A254 Putative enoyl-COA hydratase/isomerase; structural 99.2
1ef8_A261 Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc 99.2
3qk8_A272 Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB 99.2
3ot6_A232 Enoyl-COA hydratase/isomerase family protein; stru 99.19
3l3s_A263 Enoyl-COA hydratase/isomerase family protein; crot 99.19
3rrv_A276 Enoyl-COA hydratase/isomerase; structural genomics 99.19
3pe8_A256 Enoyl-COA hydratase; emerald biostructures, struct 99.18
3hin_A275 Putative 3-hydroxybutyryl-COA dehydratase; structu 99.18
3myb_A286 Enoyl-COA hydratase; ssgcid, struct genomics, seat 99.18
3rsi_A265 Putative enoyl-COA hydratase/isomerase; structural 99.18
3oc7_A267 Enoyl-COA hydratase; seattle structural genomics c 99.17
2pbp_A258 Enoyl-COA hydratase subunit I; B-oxidation, struct 99.17
2j5i_A276 P-hydroxycinnamoyl COA hydratase/lyase; vanillin, 99.17
1nzy_A269 Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen 99.16
2q35_A243 CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} 99.16
2vx2_A287 Enoyl-COA hydratase domain-containing protein 3; i 99.16
1wz8_A264 Enoyl-COA hydratase; lyase, crotonase, hexamer, st 99.16
3he2_A264 Enoyl-COA hydratase ECHA6; fatty acid metabolism, 99.15
3hp0_A267 Putative polyketide biosynthesis enoyl-COA hydrata 99.14
4f47_A278 Enoyl-COA hydratase ECHA19; ssgcid, seattle struct 99.14
1sg4_A260 3,2-trans-enoyl-COA isomerase, mitochondrial; crot 99.14
2ppy_A265 Enoyl-COA hydratase; beta-oxidation, fatty acid me 99.14
1pjh_A280 Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral 99.13
3njd_A333 Enoyl-COA hydratase; ssgcid, mycobacerium smegmati 99.13
3h81_A278 Enoyl-COA hydratase ECHA8; niaid, decode, infectio 99.13
3moy_A263 Probable enoyl-COA hydratase; ssgcid, seattle stru 99.12
3tlf_A274 Enoyl-COA hydratase/isomerase; structural genomics 99.12
3qre_A298 Enoyl-COA hydratase, ECHA12_1; structural genomics 99.11
3gkb_A287 Putative enoyl-COA hydratase; structural genomics, 99.1
3r9q_A262 Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome 99.09
4eml_A275 Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe 99.09
3swx_A265 Probable enoyl-COA hydratase/isomerase; structural 99.09
1szo_A257 6-oxocamphor hydrolase; enzyme-product complex; HE 99.08
3m6n_A305 RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X 99.08
2uzf_A273 Naphthoate synthase; lyase, menaquinone biosynthes 99.08
3t89_A289 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase 99.07
3h0u_A289 Putative enoyl-COA hydratase; structural genomics, 99.07
3lao_A258 Enoyl-COA hydratase/isomerase; alpha-beta sandwich 99.07
3t8b_A334 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase 99.05
3t3w_A279 Enoyl-COA hydratase; ssgcid, structural genomics, 99.05
1mj3_A260 Enoyl-COA hydratase, mitochondrial; homohexamer, l 99.04
3trr_A256 Probable enoyl-COA hydratase/isomerase; ssgcid, st 99.04
3qxi_A265 Enoyl-COA hydratase ECHA1; structural genomics, se 99.03
3r9t_A267 ECHA1_1; ssgcid, seattle structural genomics cente 99.03
2j5g_A263 ALR4455 protein; enzyme evolution, C-C bond hydrol 99.03
4hdt_A353 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti 99.03
1hzd_A272 AUH, AU-binding protein/enoyl-COA hydratase; RNA-b 99.02
3qxz_A265 Enoyl-COA hydratase/isomerase; structural genomics 98.99
3viv_A230 441AA long hypothetical NFED protein; protein-pept 98.99
3bpt_A363 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet 98.98
3ju1_A407 Enoyl-COA hydratase/isomerase family protein; alph 98.92
1y7o_A218 ATP-dependent CLP protease proteolytic subunit; hy 98.84
2w3p_A556 Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri 98.75
3zwc_A 742 Peroxisomal bifunctional enzyme; beta oxidation pa 98.73
2cby_A208 ATP-dependent CLP protease proteolytic subunit 1; 98.7
1wdk_A 715 Fatty oxidation complex alpha subunit; alpha2BETA2 98.67
2np9_A440 DPGC; protein inhibitor complex, oxidoreductase; H 98.64
2f6i_A215 ATP-dependent CLP protease, putative; structural g 98.62
3p2l_A201 ATP-dependent CLP protease proteolytic subunit; st 98.52
1tg6_A277 Putative ATP-dependent CLP protease proteolytic S; 98.51
3qwd_A203 ATP-dependent CLP protease proteolytic subunit; ca 98.51
1yg6_A193 ATP-dependent CLP protease proteolytic subunit; en 98.47
2wtb_A 725 MFP2, fatty acid multifunctional protein (ATMFP2); 98.45
3rst_A240 Signal peptide peptidase SPPA; alpha/beta protein 98.45
3bf0_A593 Protease 4; bacterial, hydrolase, inner membrane, 98.44
4gm2_A205 ATP-dependent CLP protease proteolytic subunit; st 98.11
3bf0_A593 Protease 4; bacterial, hydrolase, inner membrane, 97.61
3s84_A273 Apolipoprotein A-IV; four helix bundle, transport 86.29
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Back     alignment and structure
Probab=100.00  E-value=2.9e-61  Score=508.07  Aligned_cols=291  Identities=50%  Similarity=0.785  Sum_probs=276.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhccCChhhHhhhcCCCCCCCHHHHHhhhcccceEccCCCCCCCCCceEEEEEEEC
Q 006153            3 NDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMD   82 (658)
Q Consensus         3 ~~~~~~~~~~i~~le~~~~~~~~~i~~~lt~werv~~ar~~~Rp~are~I~~L~D~F~EL~gd~~~~dD~aVVtG~GrI~   82 (658)
                      +.+++|++++|..+|.++.++.+++|++|+||++++++|||+|||++++|+.|||+|.|+++++.|++|++||||+|+|+
T Consensus        36 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~re~I~~l~D~f~El~~d~~~~~d~~vV~G~gri~  115 (327)
T 2f9i_A           36 DKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLN  115 (327)
T ss_dssp             -------CTTHHHHHHHHHHHHHHHHHSCCHHHHHHHHTBTTSCCHHHHHHHHCEEEEECCCCSSSCCCTTEEEEEEEET
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHhcCChhhcccccCCCCCCCHHHHHHHhccceEEecCCCCcCcccceEEEEEEEC
Confidence            44579999999999999999999999999999999999999999999999999999999999888888899999999999


Q ss_pred             CeEEEEEeeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCChhHHHhchHHHHHHHHHHHh
Q 006153           83 GRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMF  162 (658)
Q Consensus        83 GrpV~VIa~d~~~~~~e~~~~~gGsl~p~g~rKa~R~i~lAdk~~lPIV~LiDTpGa~~g~~aE~~Gq~~aiA~~l~als  162 (658)
                      |+||+|++||++.++++++.+++|++++++|+|++|+|++|+++++|||+|+||||+++|.++|..|++.++++++.+++
T Consensus       116 G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~~PlI~lvdt~Ga~~g~~ae~~g~~~~~a~~l~al~  195 (327)
T 2f9i_A          116 GRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMA  195 (327)
T ss_dssp             TEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCCHHHHHTTHHHHHHHHHHHHH
T ss_pred             CEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCCcchhhhhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCEEEEEcCCCchhhhhhhccccEEEEEcCceEEEeCHHHHHHHhhhhccCchHHHHhhcccHHHHHHcCCceeeec
Q 006153          163 GLKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIP  242 (658)
Q Consensus       163 ~a~VPiISVViG~a~GGGAlalg~aD~ViA~p~A~i~VmgPEgaAsIl~rd~~~~~eAaE~~kitA~dL~~~GlVD~IIp  242 (658)
                      ++++|+|++|+|+|+|||++++++||++||||+|.|++++|++|++++|++...++++++...++|++++++|+||.|||
T Consensus       196 ~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v~~peg~a~il~~~~~~a~~A~e~~~itA~~a~~~GlVd~VV~  275 (327)
T 2f9i_A          196 SLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVIS  275 (327)
T ss_dssp             TCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBSSCHHHHHHHHSSCGGGHHHHHHHHTCBHHHHHHTTSSSEEEC
T ss_pred             hCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEeecCchHHHHHHHHHhcchHHHHHHcCCCHHHHHHcCCceEEec
Confidence            99999999999999999999999999999999999999999999999999988778888889999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhccCCC
Q 006153          243 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGGFQ  293 (658)
Q Consensus       243 e~~ggah~dp~~tr~~L~~aL~~~L~eL~~l~~~~ll~~R~~k~r~~G~~~  293 (658)
                      +|+||||+||..+...++..|...|..|..+++++++.+||+|||+||.|.
T Consensus       276 ep~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~~R~~~~~~~g~~~  326 (327)
T 2f9i_A          276 EPLGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYI  326 (327)
T ss_dssp             CCTTCGGGCHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCCCCccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCcC
Confidence            999999999999999999999999999999999999999999999999875
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* Back     alignment and structure
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} Back     alignment and structure
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A Back     alignment and structure
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Back     alignment and structure
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} Back     alignment and structure
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Back     alignment and structure
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* Back     alignment and structure
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Back     alignment and structure
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Back     alignment and structure
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} Back     alignment and structure
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A Back     alignment and structure
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* Back     alignment and structure
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A Back     alignment and structure
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Back     alignment and structure
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* Back     alignment and structure
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A Back     alignment and structure
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Back     alignment and structure
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Back     alignment and structure
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus} Back     alignment and structure
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Back     alignment and structure
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A* Back     alignment and structure
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0 Back     alignment and structure
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} Back     alignment and structure
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Back     alignment and structure
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Back     alignment and structure
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Back     alignment and structure
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Back     alignment and structure
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Back     alignment and structure
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} Back     alignment and structure
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Back     alignment and structure
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Back     alignment and structure
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Back     alignment and structure
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Back     alignment and structure
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Back     alignment and structure
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Back     alignment and structure
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Back     alignment and structure
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Back     alignment and structure
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Back     alignment and structure
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Back     alignment and structure
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A Back     alignment and structure
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Back     alignment and structure
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Back     alignment and structure
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Back     alignment and structure
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Back     alignment and structure
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Back     alignment and structure
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Back     alignment and structure
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0 Back     alignment and structure
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Back     alignment and structure
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Back     alignment and structure
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Back     alignment and structure
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Back     alignment and structure
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Back     alignment and structure
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Back     alignment and structure
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Back     alignment and structure
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Back     alignment and structure
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Back     alignment and structure
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Back     alignment and structure
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Back     alignment and structure
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Back     alignment and structure
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Back     alignment and structure
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Back     alignment and structure
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Back     alignment and structure
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0 Back     alignment and structure
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Back     alignment and structure
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Back     alignment and structure
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Back     alignment and structure
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Back     alignment and structure
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Back     alignment and structure
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Back     alignment and structure
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Back     alignment and structure
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A Back     alignment and structure
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Back     alignment and structure
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Back     alignment and structure
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Back     alignment and structure
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Back     alignment and structure
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Back     alignment and structure
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Back     alignment and structure
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A Back     alignment and structure
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Back     alignment and structure
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile} Back     alignment and structure
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Back     alignment and structure
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0 Back     alignment and structure
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A Back     alignment and structure
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Back     alignment and structure
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Back     alignment and structure
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1 Back     alignment and structure
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Back     alignment and structure
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1 Back     alignment and structure
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1 Back     alignment and structure
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1 Back     alignment and structure
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A Back     alignment and structure
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis} Back     alignment and structure
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A Back     alignment and structure
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A Back     alignment and structure
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A Back     alignment and structure
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 658
d2f9ya1316 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase c 3e-75
d2a7sa2271 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase com 3e-26
d1uyra2404 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxyla 5e-26
d1vrga2264 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase com 9e-26
d1on3a2264 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltra 2e-20
d1pixa3299 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase 3e-20
d1pixa2287 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A 6e-14
d1xnya1258 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase comp 2e-09
d1vrga1251 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase compl 3e-09
d2a7sa1258 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase comp 2e-07
d2f9yb1263 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase 1e-06
d1uyra1333 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxyla 1e-05
d1uyra1333 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxyla 6e-04
>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA
species: Escherichia coli [TaxId: 562]

 Score =  241 bits (617), Expect = 3e-75
 Identities = 136/288 (47%), Positives = 181/288 (62%)

Query: 3   NDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVEL 62
               ++  +++  L  K  +  + ++  L   Q   +ARHP RP  LD+V    ++F EL
Sbjct: 27  EKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDEL 86

Query: 63  HGDRAGYDDPAIVTGIGSMDGRTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYY 122
            GDRA  DD AIV GI  +DGR  M +GHQKGR TKE I+RNFGMP P GYRKALR+M  
Sbjct: 87  AGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQM 146

Query: 123 ADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVIGEGGSGGAL 182
           A+    PI+TFIDTPGAY  + +EE GQ EAIA NLR M  L VP++  VIGEGGSGGAL
Sbjct: 147 AERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGAL 206

Query: 183 AIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIP 242
           AIG  +K+ ML+ + + V SPE CA+ILWKSA  +P AAE + I    L +L++ D +IP
Sbjct: 207 AIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIRPRLKELKLIDSIIP 266

Query: 243 EPLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIG 290
           EPLGGAH +P   +  +K  +   + +L  + T++L   R  +    G
Sbjct: 267 EPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYG 314
>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 271 Back     information, alignment and structure
>d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 404 Back     information, alignment and structure
>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Length = 264 Back     information, alignment and structure
>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Length = 264 Back     information, alignment and structure
>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Length = 299 Back     information, alignment and structure
>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Length = 287 Back     information, alignment and structure
>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Length = 258 Back     information, alignment and structure
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Length = 251 Back     information, alignment and structure
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 258 Back     information, alignment and structure
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]} Length = 263 Back     information, alignment and structure
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 333 Back     information, alignment and structure
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 333 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query658
d2f9ya1316 Acetyl-coenzyme A carboxylase carboxyl transferase 100.0
d1xnya2263 Propionyl-CoA carboxylase complex B subunit, PccB 100.0
d1on3a2264 Methylmalonyl-CoA carboxyltransferase (transcarbox 100.0
d1vrga2264 Propionyl-CoA carboxylase complex B subunit, PccB 100.0
d2a7sa2271 Propionyl-CoA carboxylase complex B subunit, PccB 100.0
d1pixa3299 Glutaconyl-CoA decarboxylase A subunit {Acidaminoc 100.0
d1uyra2404 Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc 100.0
d1pixa2287 Glutaconyl-CoA decarboxylase A subunit {Acidaminoc 99.97
d1vrga1251 Propionyl-CoA carboxylase complex B subunit, PccB 99.97
d1xnya1258 Propionyl-CoA carboxylase complex B subunit, PccB 99.97
d1on3a1253 Methylmalonyl-CoA carboxyltransferase (transcarbox 99.96
d2a7sa1258 Propionyl-CoA carboxylase complex B subunit, PccB 99.96
d2f9yb1263 Acetyl-coenzyme A carboxylase carboxyl transferase 99.95
d1uyra1333 Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc 99.79
d2f6qa1245 Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human ( 99.33
d2fw2a1258 Chromodomain protein CDY2A {Human (Homo sapiens) [ 99.32
d1ef8a_261 Methylmalonyl CoA decarboxylase {Escherichia coli 99.23
d1wz8a1263 Probable enoyl-CoA hydratase TTHA0218 {Thermus the 99.22
d2a7ka1230 Carbapenem biosynthes protein CarB {Pectobacterium 99.22
d1uiya_253 Enoyl-CoA hydratase (crotonase) {Thermus thermophi 99.22
d1dcia_275 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 99.19
d1sg4a1249 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 99.18
d1pjha_266 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 99.18
d1nzya_269 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., 99.16
d1hzda_266 AUH protein {Human (Homo sapiens) [TaxId: 9606]} 99.12
d1mj3a_260 Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve 99.11
d1szoa_249 6-oxo camphor hydrolase {Rhodococcus erythropolis 99.02
d1wdka4310 Fatty oxidation complex alpha subunit, N-terminal 99.02
d1q52a_297 Naphthoate synthase MenB {Mycobacterium tuberculos 98.98
d1yg6a1183 Clp protease, ClpP subunit {Escherichia coli [TaxI 98.15
d1tg6a1193 Clp protease, ClpP subunit {Human (Homo sapiens), 98.09
d2cbya1179 Clp protease, ClpP subunit {Mycobacterium tubercul 98.0
d2f6ia1190 Clp protease, ClpP subunit {Plasmodium falciparum 97.98
d1y7oa1192 Clp protease, ClpP subunit {Streptococcus pneumoni 97.95
>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-71  Score=577.05  Aligned_cols=288  Identities=47%  Similarity=0.775  Sum_probs=279.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhccCChhhHhhhcCCCCCCCHHHHHhhhcccceEccCCCCCCCCCceEEEEEEECC
Q 006153            4 DTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGIGSMDG   83 (658)
Q Consensus         4 ~~~~~~~~~i~~le~~~~~~~~~i~~~lt~werv~~ar~~~Rp~are~I~~L~D~F~EL~gd~~~~dD~aVVtG~GrI~G   83 (658)
                      .+++|++++|..|++++.++++++|++||+|++|+++|||+||++.+||..+||+|+|||||+.|+||+++++|+|+++|
T Consensus        28 ~~~~d~~~ei~~Le~k~~~l~k~iy~~Lt~w~~vq~aRhp~Rp~~~d~i~~i~~~f~eL~Gdr~~~dD~aii~G~a~~~g  107 (316)
T d2f9ya1          28 KLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDG  107 (316)
T ss_dssp             ------CCGGGGTHHHHHTTTTHHHHTCCHHHHHHHHTCTTCCCHHHHHHHHCEEEEECCCCSSSCCCTTEEEEEEEETT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHhhcCCCCccHHHHHhhcccchhhcccccccCcCccccceeeeecC
Confidence            34678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEeeecCCCccccccccCCCCCHHHHHHHHHHHHHhhhcCCcEEEEecCCCCCCChhHHHhchHHHHHHHHHHHhc
Q 006153           84 RTYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRTMFG  163 (658)
Q Consensus        84 rpV~VIa~d~~~~~~e~~~~~gGsl~p~g~rKa~R~i~lAdk~~lPIV~LiDTpGa~~g~~aE~~Gq~~aiA~~l~als~  163 (658)
                      +||+|||+++++++++++.++|||++|++|+|++|+|++|++|++|||+|+|||||++|.++|.+|+++++|+++.++++
T Consensus       108 ~~V~vIg~~kg~~~~~~~~~n~G~~~p~~~rKa~r~~~~a~~~~~Pii~~vDtpG~~~g~~~E~~g~~~~~a~~~~~~~~  187 (316)
T d2f9ya1         108 RPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSR  187 (316)
T ss_dssp             EEEEEEEECCCSSTTHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCSHHHHHTTHHHHHHHHHHHHHT
T ss_pred             CeEEEEEeecCCCcccccccccccccHHHHHHHHHHHHHHHHcCcceEEEEecCcccCCcccccccHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCEEEEEcCCCchhhhhhhccccEEEEEcCceEEEeCHHHHHHHhhhhccCchHHHHhhcccHHHHHHcCCceeeecC
Q 006153          164 LKVPIISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKAAEKLKITGSELCKLQIADGVIPE  243 (658)
Q Consensus       164 a~VPiISVViG~a~GGGAlalg~aD~ViA~p~A~i~VmgPEgaAsIl~rd~~~~~eAaE~~kitA~dL~~~GlVD~IIpe  243 (658)
                      ++||+|+||+|+|+|||+++++++|.|+||++|+|+|+|||+||+|+|++...++++++.+++|+.+++++|+||+||||
T Consensus       188 ~~vP~i~vv~g~g~~gga~a~~~~d~v~m~~~a~~svispEg~AsILwkd~~~a~eaAealklta~dL~~lgiIDeII~E  267 (316)
T d2f9ya1         188 LGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIRPRLKELKLIDSIIPE  267 (316)
T ss_dssp             CSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEESSCHHHHHHHHSSCSTTHHHHHHHHTCSHHHHHTTTSCSCCCCC
T ss_pred             CCCceEEEEEhhhhchhhhhhhhhhHHHHHhhhHHhhccchhhhhHhhccchhhcchHHHHhhhhHHHHHcCchhhcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhccC
Q 006153          244 PLGGAHADPSWTSQQIKIAINESMDELGKMDTQELLKHRNLKFRKIGG  291 (658)
Q Consensus       244 ~~ggah~dp~~tr~~L~~aL~~~L~eL~~l~~~~ll~~R~~k~r~~G~  291 (658)
                      |.||||+||..+...++..|..+|..|..+++++|+.+||+|||+||.
T Consensus       268 P~gGAhrd~~~~~~~lk~~I~~~L~~L~~~~~~~Ll~~R~~kf~~iG~  315 (316)
T d2f9ya1         268 PLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGY  315 (316)
T ss_dssp             STTCGGGCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHSSC
T ss_pred             CCcccccCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999999999999993
>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Back     information, alignment and structure
>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Back     information, alignment and structure
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Back     information, alignment and structure
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Back     information, alignment and structure
>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure