Citrus Sinensis ID: 006164

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
MDSRRSSRALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAIQEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI
cccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHccccEEEEHHHHHHHHcccccEEEEcccHHcccccHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHccccccc
ccccccccccEcccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccHcccccccHcccccccccccccccHccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccEHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHcccEcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHcEEEEcHHHHHHccHHHHHHHHHHHHHHHHHccccEEEEEEcEEEcccccccccccccccccccccHHHHEEcccccccccccccccccccEEEccccccccHHHHHEEEHcccccccccHHHHHHHHccccEEc
mdsrrssralidpkvrqvgfftnaplppdrtqsdppdpihstpladasspgnflspvmippprhpsssllprlphspsdafpppsptttttttslgdfsddvtaassppSAAAAAARVrgrgssvkqqgaassfpgggfevppsvkapssvpasglttvsvvklppgisenaggsvsVEVQsdralnskplkekTSKAERRAIQEAQRAAKAAAKAEgiktpaatalanakptkstrpspqrndspvVVAAsekkggdrsvekdrkkdvphprmqyddksrVQKLkkrsvvkptearNRVELFrhlpqyehgtqlpvlqskffqldtlhpaVYKVGLQylsgdicggNARCIAMLQAFQEAIRdystppaktlsrDLTAKISSYVSFlidcrplsvsMGNAIRFLKSQIAkipislsesEAKATLHSDIERFINEKIILADRVIVKHAVTkirdgdvlltyGSSSAVEMILQHAHELGKQFRVVIvdsrpkheGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASsvlsngtvcsRVGTACVAMVAYGFHIPVLVCCeaykfhervqldsicsnelgvllagdpdsiskvpgredinhldgwdksenLQLLNLiydatpsdyVSLIITdygmipptsvpVIVReygrgqlwi
mdsrrssralidpkvrqvgFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLppgisenaggsvsvevqsdralnskplkektskaERRAIQEAQRAAKAAakaegiktpaatalanakptkstrpspqrndspvvvaasekkggdrsvekdrkkdvphprmqyddksrvqklkkrsvvkptearnrVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINekiiladrvIVKHAvtkirdgdvLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI
MDSRRSSRALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIppprhpsssllprlphspsDAFpppsptttttttsLGDFSDDVTaassppsaaaaaarvrgrgssvKQQGAASSFPGGGFEvppsvkapssvpasGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSkaerraiqeaqraakaaakaeGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEgklllrrlvrkglSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI
***********************************************************************************************************************************************************************************************************************************************************************************************************VELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLW*
**********IDPKVRQVGFF****************************************************************************************************************************************************************************************************************************************************************************************LFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGR**LWI
********ALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPS*************TTSLGDFSDDVT*******************************PGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPL***************************IKTPAATA********************************************HPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI
********ALIDPKVRQVGFFTNA*******************************PVMIPP**HPSSSLLPRLPHSPSD*****************************************************************************************************************************************************************************************************DDKSRVQKLKKRS*VKP***RNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSRRSSRALIDPKVRQVGFFTNAPLPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMIPPPRHPSSSLLPRLPHSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAIQEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query658 2.2.26 [Sep-21-2011]
P41111523 Translation initiation fa yes no 0.626 0.787 0.444 1e-98
Q61749524 Translation initiation fa yes no 0.627 0.788 0.443 1e-97
Q3T058524 Translation initiation fa yes no 0.627 0.788 0.449 2e-97
Q63186524 Translation initiation fa yes no 0.627 0.788 0.438 3e-97
Q9UI10523 Translation initiation fa yes no 0.624 0.785 0.446 3e-96
Q54FM3619 Translation initiation fa yes no 0.580 0.617 0.447 2e-92
Q09924467 Probable translation init yes no 0.484 0.683 0.458 2e-84
P12754651 Translation initiation fa yes no 0.521 0.526 0.372 5e-69
Q8U4G6324 Putative translation init yes no 0.425 0.864 0.294 2e-29
Q9V281324 Putative translation init yes no 0.455 0.925 0.273 2e-28
>sp|P41111|EI2BD_RABIT Translation initiation factor eIF-2B subunit delta OS=Oryctolagus cuniculus GN=EIF2B4 PE=2 SV=2 Back     alignment and function desciption
 Score =  361 bits (926), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 204/459 (44%), Positives = 277/459 (60%), Gaps = 47/459 (10%)

Query: 197 KAERRAIQEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSPQRNDSPVVVAASEKKG 256
           +AERRA QEA+RA K A K E                    P PQ + S    A     G
Sbjct: 100 RAERRAKQEAERALKQARKGE-----------------QGGPPPQASPS---TAGEAPAG 139

Query: 257 GDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEAR----NRVELFRHLPQYEHG 312
           G R  E            Q DD + +++L ++S  +    R    ++V LF HLPQY   
Sbjct: 140 GKRLTE----------HTQADDPTLLRRLVRKSERQQVPTRKDYGSKVSLFSHLPQYSRQ 189

Query: 313 TQLPVLQSKFFQL--DTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA 370
             L    +++  +    +HPA+ ++GLQY  G I G NARCIA+L+A Q+ I+DY+TPP 
Sbjct: 190 NSL----TQYMSIPSSVIHPAMVRLGLQYSQGLISGSNARCIALLRALQQVIQDYTTPPN 245

Query: 371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIE 430
           + LSRDL  K+  Y+ FL  CRPLS SM NAI+FL  +I  +  +  E EAKA L +  +
Sbjct: 246 EELSRDLVNKLKPYICFLTQCRPLSASMYNAIKFLNKEITGVSSTKREEEAKAELQAAAD 305

Query: 431 RFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRP 490
           R++ EKI+LA + I++ A  KI +GDV+L YG SS V  ILQ A   G++FRVV+VDSRP
Sbjct: 306 RYVQEKIVLAAQAILRFASKKISNGDVILVYGCSSLVSRILQEAWSEGRKFRVVVVDSRP 365

Query: 491 KHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAM 550
           + EG+ +LR LVR G+  +Y  I A SY++ EV++V LGA ++L+NG+V SRVGTA +A+
Sbjct: 366 RLEGRHMLRFLVRAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLAL 425

Query: 551 VAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDK 610
           VA   ++PVLVCCE YKF ERVQ D+  SNEL      DPD +    G  D   L  W  
Sbjct: 426 VARAHNVPVLVCCETYKFCERVQTDAFVSNEL-----DDPDDLQCERG--DHVALANWQS 478

Query: 611 SENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVR 649
             +L+LLNL+YD TP + V L+IT+ GMIP +SVPV++R
Sbjct: 479 HPSLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLR 517
Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.
Oryctolagus cuniculus (taxid: 9986)
>sp|Q61749|EI2BD_MOUSE Translation initiation factor eIF-2B subunit delta OS=Mus musculus GN=Eif2b4 PE=2 SV=2 Back     alignment and function description
>sp|Q3T058|EI2BD_BOVIN Translation initiation factor eIF-2B subunit delta OS=Bos taurus GN=EIF2B4 PE=2 SV=1 Back     alignment and function description
>sp|Q63186|EI2BD_RAT Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus GN=Eif2b4 PE=2 SV=1 Back     alignment and function description
>sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta OS=Homo sapiens GN=EIF2B4 PE=1 SV=2 Back     alignment and function description
>sp|Q54FM3|EI2BD_DICDI Translation initiation factor eIF-2B subunit delta OS=Dictyostelium discoideum GN=eif2b4 PE=3 SV=1 Back     alignment and function description
>sp|Q09924|EI2BD_SCHPO Probable translation initiation factor eIF-2B subunit delta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tif224 PE=1 SV=1 Back     alignment and function description
>sp|P12754|EI2BD_YEAST Translation initiation factor eIF-2B subunit delta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCD2 PE=1 SV=1 Back     alignment and function description
>sp|Q8U4G6|EI2B2_PYRFU Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=PF0122 PE=3 SV=2 Back     alignment and function description
>sp|Q9V281|EI2B2_PYRAB Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aIF-2BII PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query658
225451956650 PREDICTED: translation initiation factor 0.952 0.964 0.694 0.0
224127602634 predicted protein [Populus trichocarpa] 0.945 0.981 0.7 0.0
297801756641 eukaryotic translation initiation factor 0.958 0.984 0.670 0.0
15240967642 translation initiation factor eIF-2B del 0.962 0.985 0.674 0.0
356551080659 PREDICTED: translation initiation factor 0.972 0.971 0.655 0.0
255560374638 translation initiation factor 2b, delta 0.960 0.990 0.686 0.0
356567176627 PREDICTED: translation initiation factor 0.948 0.995 0.691 0.0
356573663660 PREDICTED: translation initiation factor 0.965 0.962 0.661 0.0
449440905651 PREDICTED: translation initiation factor 0.957 0.967 0.621 0.0
359490928649 PREDICTED: translation initiation factor 0.946 0.959 0.622 0.0
>gi|225451956|ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/681 (69%), Positives = 541/681 (79%), Gaps = 54/681 (7%)

Query: 1   MDSRRSSRALIDPKVRQVGFFTNAP-LPPDRTQSDPPDPIHSTPLADASSPGNFLSPVMI 59
           MD RR +R +IDPKVRQVGFF  AP   P RTQS PP+      +AD S  GN LSPVMI
Sbjct: 1   MDPRRGARVVIDPKVRQVGFF--APGASPGRTQSGPPESSSPP-VADNSPTGNSLSPVMI 57

Query: 60  PPPRHPSSSLLPRLP-----------------HSPSDAFPPPSPTTT-TTTTSLGDFSDD 101
           PPPRH S +LL   P                 ++PS+ F   SPT +  +    G+FS+D
Sbjct: 58  PPPRHASDNLLSARPALYPPLRRPGDTIPVGSYNPSEFFHGTSPTASFYSKVGDGEFSED 117

Query: 102 VTAASSPPSAAAAAARVRGRGSSVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSV 161
                      A+ A    RG+S K    ASSFPGGGF++       ++V  S LTTVSV
Sbjct: 118 -----------ASGAGWTHRGNSGK---VASSFPGGGFDL-------TAVKPSNLTTVSV 156

Query: 162 VKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAIQEAQRAAKAAAKAEGIKT 221
           V +PPGIS  +GG+ S+EVQ+++  +S+ LKEKTSKAERRA+QEAQRAAKAAAKAE  K 
Sbjct: 157 VNMPPGISVKSGGA-SIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKA 215

Query: 222 P-AATALA---NAKPTKSTRPSPQRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYD 277
           P AA+ +A   NAKP K ++ S Q+ DS   V ASEKKG DR  EKDRKKDVPHPRMQ+D
Sbjct: 216 PIAASGVATSVNAKPAKVSKLSSQKKDS-ASVTASEKKGVDRPPEKDRKKDVPHPRMQFD 274

Query: 278 DKSRVQKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGL 337
           DKSRV+K K+R+VV+P E RNRVELFRHLPQYE GT LP L+SKFF LD +HPAVYKVGL
Sbjct: 275 DKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGL 334

Query: 338 QYLSGDICGGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVS 397
           QYL+GD+ GGNARCIAMLQAFQEAI+DYSTPP KTL RDLTA++SSYVSFLI+CRPLS+S
Sbjct: 335 QYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSIS 394

Query: 398 MGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDV 457
           MGNAIRFLKS+IAK+P+SLSESEAKA+L SDI RFINEKI+LAD+VIV+HAVTKIRDGDV
Sbjct: 395 MGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDV 454

Query: 458 LLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAIS 517
           LLTYGSSSAVEMIL +AHELGKQFRVV+VDSRPK EG+LLLRRLV KGLSCTYTHINA+S
Sbjct: 455 LLTYGSSSAVEMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVS 514

Query: 518 YIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSI 577
           YI+HEVTRVFLGASSVLSNGTV SRVGTACV+MVA+ F +PVLVCCEAYKF+ERVQLDSI
Sbjct: 515 YIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSI 574

Query: 578 CSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYG 637
           CSNEL     GDPD+ISKVPGRE+IN+LD W KSENLQLLNLIYDATPSDYVS+IITDYG
Sbjct: 575 CSNEL-----GDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYG 629

Query: 638 MIPPTSVPVIVREYGRGQLWI 658
           M+PPTSVPVIVREY R  LWI
Sbjct: 630 MVPPTSVPVIVREYRREHLWI 650

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224127602|ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|222870772|gb|EEF07903.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297801756|ref|XP_002868762.1| eukaryotic translation initiation factor 2B family protein [Arabidopsis lyrata subsp. lyrata] gi|297314598|gb|EFH45021.1| eukaryotic translation initiation factor 2B family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15240967|ref|NP_198680.1| translation initiation factor eIF-2B delta subunit [Arabidopsis thaliana] gi|10176832|dbj|BAB10154.1| unnamed protein product [Arabidopsis thaliana] gi|17064894|gb|AAL32601.1| Unknown protein [Arabidopsis thaliana] gi|31711742|gb|AAP68227.1| At5g38640 [Arabidopsis thaliana] gi|332006961|gb|AED94344.1| translation initiation factor eIF-2B delta subunit [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356551080|ref|XP_003543906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Glycine max] Back     alignment and taxonomy information
>gi|255560374|ref|XP_002521202.1| translation initiation factor 2b, delta subunit, putative [Ricinus communis] gi|223539567|gb|EEF41154.1| translation initiation factor 2b, delta subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356567176|ref|XP_003551797.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Glycine max] Back     alignment and taxonomy information
>gi|356573663|ref|XP_003554977.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Glycine max] Back     alignment and taxonomy information
>gi|449440905|ref|XP_004138224.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Cucumis sativus] gi|449477110|ref|XP_004154932.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|359490928|ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query658
TAIR|locus:2159868642 AT5G38640 "AT5G38640" [Arabido 0.781 0.800 0.674 1.1e-196
UNIPROTKB|Q2QM52607 LOC_Os12g42260 "Initiation fac 0.740 0.802 0.619 1.2e-160
TAIR|locus:2028501666 AT1G48970 "AT1G48970" [Arabido 0.784 0.774 0.560 2.3e-159
TAIR|locus:2051779333 AT2G44070 "AT2G44070" [Arabido 0.492 0.972 0.742 2.6e-127
UNIPROTKB|A8JGW6434 EIF2B "Eukaryotic initiation f 0.533 0.808 0.501 3.4e-92
ZFIN|ZDB-GENE-030131-955541 eif2b4 "eukaryotic translation 0.636 0.774 0.458 3.5e-91
UNIPROTKB|F1NDW0503 EIF2B4 "Uncharacterized protei 0.566 0.741 0.484 3.2e-88
UNIPROTKB|F1PAD0525 EIF2B4 "Uncharacterized protei 0.566 0.710 0.462 1.3e-84
UNIPROTKB|E2R8W5546 EIF2B4 "Uncharacterized protei 0.566 0.683 0.462 2.2e-84
DICTYBASE|DDB_G0290759619 eif2b4 "eIF2B GDP-GTP exchange 0.597 0.634 0.422 2.4e-83
TAIR|locus:2159868 AT5G38640 "AT5G38640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1769 (627.8 bits), Expect = 1.1e-196, Sum P(2) = 1.1e-196
 Identities = 359/532 (67%), Positives = 412/532 (77%)

Query:   131 ASSFPGGGFEXXXXXXXXXXXXXXGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKP 190
             ASS PG G +              GLTTVSVV +PPG+SE A G   +EVQSD+    KP
Sbjct:   125 ASSLPGIGMDSMAAAKSSSVPAS-GLTTVSVVTMPPGLSEKASG---MEVQSDQ---KKP 177

Query:   191 LKEKTSXXXXXXXXXXXXXXXXXXXXXGIKT-P---AATALANAKPTKSTRPSPQRNDSP 246
             LKEKT+                     G K  P   A+ A  + K  K  + + Q+ND  
Sbjct:   178 LKEKTTKAERRAIQEAQRAAKAAAKADGGKVAPVSSASVASTSVKAAKPAKATSQKNDVA 237

Query:   247 VVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRVQKLKKRSVVKPTEARNRVELFRHL 306
             V   A+EKKGG    EKDRKKD PHPRMQYDD+SRV K K+R+VVK TEA+NRVELFRHL
Sbjct:   238 VATGAAEKKGGPS--EKDRKKDAPHPRMQYDDESRVVKAKRRAVVKQTEAKNRVELFRHL 295

Query:   307 PQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYS 366
             PQYEHGTQLP L++KFFQLD +HPAVYKVGLQYLSGDI GGNARCIAMLQAFQE ++DYS
Sbjct:   296 PQYEHGTQLPDLETKFFQLDPMHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEVVKDYS 355

Query:   367 TPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLH 426
             TPP K+L+RD+TAKISSYVSFLI+CRPLS+SMGNAIRF+K++IAK+PI+LSESEAKATL 
Sbjct:   356 TPPEKSLNRDMTAKISSYVSFLIECRPLSISMGNAIRFVKNRIAKLPITLSESEAKATLQ 415

Query:   427 SDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIV 486
             SDIERFINEKII+AD VIVKHAVTKIRDGDVLLTYGS +AVEM++ HAHEL K+FRV++V
Sbjct:   416 SDIERFINEKIIVADTVIVKHAVTKIRDGDVLLTYGSPTAVEMVILHAHELRKKFRVLVV 475

Query:   487 DSRPKHEXXXXXXXXXXXXXSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTA 546
             DSRPK E             +CTYTHINAISYI+HEVT+VFLGASSVLSNGTV SRVGTA
Sbjct:   476 DSRPKLEGQLLLRRLIKRGINCTYTHINAISYIMHEVTKVFLGASSVLSNGTVYSRVGTA 535

Query:   547 CVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLD 606
             CVAMVA  F +PVLVCCEAYKFHERVQLDSICSNELG     DP++IS+V GREDIN+LD
Sbjct:   536 CVAMVANAFRVPVLVCCEAYKFHERVQLDSICSNELG-----DPNAISEVHGREDINYLD 590

Query:   607 GWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQLWI 658
             G   + NLQ LNL+YDATPSDY+S+IITDYGM+PPTSVPVIVREY +  L +
Sbjct:   591 GLTNNANLQFLNLMYDATPSDYISMIITDYGMVPPTSVPVIVREYQKEHLLV 642
GO:0003743 "translation initiation factor activity" evidence=ISS;IBA
GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IBA
GO:0005525 "GTP binding" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS;IBA
GO:0006413 "translational initiation" evidence=ISS
GO:0044237 "cellular metabolic process" evidence=IEA
GO:0045947 "negative regulation of translational initiation" evidence=IBA
GO:0050790 "regulation of catalytic activity" evidence=IBA
UNIPROTKB|Q2QM52 LOC_Os12g42260 "Initiation factor 2 subunit family protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2028501 AT1G48970 "AT1G48970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2051779 AT2G44070 "AT2G44070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A8JGW6 EIF2B "Eukaryotic initiation factor" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-955 eif2b4 "eukaryotic translation initiation factor 2B, subunit 4 delta" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDW0 EIF2B4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PAD0 EIF2B4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8W5 EIF2B4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290759 eif2b4 "eIF2B GDP-GTP exchange factor" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_1230028
hypothetical protein (634 aa)
(Populus trichocarpa)
Predicted Functional Partners:
grail3.0022009302
hypothetical protein (343 aa)
    ••• 0.829
estExt_fgenesh4_pm.C_LG_VIII0284
hypothetical protein (343 aa)
    ••• 0.828
eugene3.00030772
hypothetical protein (464 aa)
    ••• 0.819
estExt_Genewise1_v1.C_290097
hypothetical protein (465 aa)
    ••• 0.818
estExt_fgenesh4_pm.C_LG_XIII0470
SubName- Full=Putative uncharacterized protein; (271 aa)
    ••  0.806
fgenesh4_pg.C_scaffold_1866000002
annotation not avaliable (150 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
pfam01008281 pfam01008, IF-2B, Initiation factor 2 subunit fami 6e-84
COG1184301 COG1184, GCD2, Translation initiation factor 2B su 3e-70
PRK08535310 PRK08535, PRK08535, translation initiation factor 2e-40
TIGR00511301 TIGR00511, ribulose_e2b2, ribose-1,5-bisphosphate 7e-36
TIGR00524303 TIGR00524, eIF-2B_rel, eIF-2B alpha/beta/delta-rel 7e-26
PRK08335275 PRK08335, PRK08335, translation initiation factor 4e-18
COG0182346 COG0182, COG0182, Predicted translation initiation 3e-12
PRK06372253 PRK06372, PRK06372, translation initiation factor 2e-11
PRK05772363 PRK05772, PRK05772, translation initiation factor 4e-11
TIGR00512331 TIGR00512, salvage_mtnA, S-methyl-5-thioribose-1-p 1e-10
PRK06036339 PRK06036, PRK06036, translation initiation factor 2e-09
PRK06371329 PRK06371, PRK06371, translation initiation factor 3e-09
PRK05720344 PRK05720, mtnA, methylthioribose-1-phosphate isome 1e-07
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 5e-06
PHA032473151 PHA03247, PHA03247, large tegument protein UL36; P 2e-05
PRK07003830 PRK07003, PRK07003, DNA polymerase III subunits ga 4e-05
PRK12323700 PRK12323, PRK12323, DNA polymerase III subunits ga 0.002
>gnl|CDD|216240 pfam01008, IF-2B, Initiation factor 2 subunit family Back     alignment and domain information 
 Score =  265 bits (679), Expect = 6e-84
 Identities = 103/296 (34%), Positives = 162/296 (54%), Gaps = 18/296 (6%)

Query: 346 GGNARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFL 405
           G  A  IA L+     I+D  TP       +L  ++ S + FLI  RP +VS+GNAI  L
Sbjct: 4   GSPAIAIAALEGLLLVIQDARTPT----VAELKEQLRSAIEFLISARPTAVSLGNAIDRL 59

Query: 406 KSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSS 465
              I+++  S    EAK +L    + FI+E I  A R I   A   I+DGD +LT+ +S 
Sbjct: 60  LRIISELHSSSDVEEAKESLIEAADEFIDE-IEEARRKIGAIAAELIKDGDTILTHCNSG 118

Query: 466 AVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTR 525
            V  +L+ AH+ GK+FRV++ +SRP+ +G+L  + LV+ G+  T    +A+ Y++ EV +
Sbjct: 119 TVLGVLRAAHKEGKRFRVIVTESRPRLQGRLTAKELVQAGIPVTLITDSAVGYVMQEVDK 178

Query: 526 VFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVL 585
           V +GA  +L+NG + +++GT  +A++A   ++P  V  E YKF  R  LD     E    
Sbjct: 179 VIVGADRILANGGIANKIGTYQLALLAKAHNVPFYVVAETYKFDPRFPLDEDIFIEE--- 235

Query: 586 LAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPP 641
              DP+ +        I         ENL++ N  +D TP + ++LIIT+ G++PP
Sbjct: 236 --RDPEEV-LYRTGVRIA-------PENLKVRNPAFDYTPPELITLIITEVGVLPP 281

This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes, initiation factor 2B subunits 1 and 2 from archaebacteria and some proteins of unknown function from prokaryotes. Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. Members of this family have also been characterized as 5-methylthioribose- 1-phosphate isomerases, an enzyme of the methionine salvage pathway. The crystal structure of Ypr118w, a non-essential, low-copy number gene product from Saccharomyces cerevisiae, reveals a dimeric protein with two domains and a putative active site cleft. Length = 281
>gnl|CDD|224105 COG1184, GCD2, Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|236282 PRK08535, PRK08535, translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>gnl|CDD|188057 TIGR00511, ribulose_e2b2, ribose-1,5-bisphosphate isomerase, e2b2 family Back     alignment and domain information
>gnl|CDD|233008 TIGR00524, eIF-2B_rel, eIF-2B alpha/beta/delta-related uncharacterized proteins Back     alignment and domain information
>gnl|CDD|169387 PRK08335, PRK08335, translation initiation factor IF-2B subunit alpha; Validated Back     alignment and domain information
>gnl|CDD|223260 COG0182, COG0182, Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235788 PRK06372, PRK06372, translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>gnl|CDD|168237 PRK05772, PRK05772, translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|233003 TIGR00512, salvage_mtnA, S-methyl-5-thioribose-1-phosphate isomerase Back     alignment and domain information
>gnl|CDD|180362 PRK06036, PRK06036, translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|180547 PRK06371, PRK06371, translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>gnl|CDD|235578 PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional Back     alignment and domain information
>gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 658
KOG1467556 consensus Translation initiation factor 2B, delta 100.0
TIGR00512331 salvage_mtnA S-methyl-5-thioribose-1-phosphate iso 100.0
PRK05720344 mtnA methylthioribose-1-phosphate isomerase; Revie 100.0
PRK08535310 translation initiation factor IF-2B subunit delta; 100.0
COG0182346 Predicted translation initiation factor 2B subunit 100.0
TIGR00511301 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e 100.0
PRK05772363 translation initiation factor IF-2B subunit alpha; 100.0
PRK06036339 translation initiation factor IF-2B subunit alpha; 100.0
PRK08334356 translation initiation factor IF-2B subunit beta; 100.0
PRK06371329 translation initiation factor IF-2B subunit alpha; 100.0
COG1184301 GCD2 Translation initiation factor 2B subunit, eIF 100.0
TIGR00524303 eIF-2B_rel eIF-2B alpha/beta/delta-related unchara 100.0
PF01008282 IF-2B: Initiation factor 2 subunit family; InterPr 100.0
PRK08335275 translation initiation factor IF-2B subunit alpha; 100.0
KOG1468354 consensus Predicted translation initiation factor 100.0
KOG1465353 consensus Translation initiation factor 2B, beta s 100.0
KOG1466313 consensus Translation initiation factor 2B, alpha 100.0
PRK06372253 translation initiation factor IF-2B subunit delta; 100.0
PRK00702220 ribose-5-phosphate isomerase A; Provisional 97.41
TIGR00021218 rpiA ribose 5-phosphate isomerase. This model desc 97.35
cd01398213 RPI_A RPI_A: Ribose 5-phosphate isomerase type A ( 97.29
PRK10434256 srlR DNA-bindng transcriptional repressor SrlR; Pr 97.12
PRK13509251 transcriptional repressor UlaR; Provisional 97.11
PRK09802269 DNA-binding transcriptional regulator AgaR; Provis 96.94
PRK10906252 DNA-binding transcriptional repressor GlpR; Provis 96.78
PF00455161 DeoRC: DeoR C terminal sensor domain; InterPro: IP 96.68
PRK10411240 DNA-binding transcriptional activator FucR; Provis 95.78
COG1349253 GlpR Transcriptional regulators of sugar metabolis 95.48
PRK10681252 DNA-binding transcriptional repressor DeoR; Provis 95.07
PLN02384264 ribose-5-phosphate isomerase 94.0
PRK13978228 ribose-5-phosphate isomerase A; Provisional 92.25
KOG0259 447 consensus Tyrosine aminotransferase [Amino acid tr 90.91
COG0120227 RpiA Ribose 5-phosphate isomerase [Carbohydrate tr 88.02
COG2057225 AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, 86.54
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 85.08
COG0426388 FpaA Uncharacterized flavoproteins [Energy product 84.35
PRK04311 464 selenocysteine synthase; Provisional 82.91
TIGR00474 454 selA seryl-tRNA(sec) selenium transferase. In bact 81.19
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=5.9e-109  Score=882.15  Aligned_cols=536  Identities=52%  Similarity=0.810  Sum_probs=442.3

Q ss_pred             CCCCCCCcccccCCCC-CCCCCCCCCCC---CCCCCCCCCCCCCCccccccCCCCCCccccCCCCCcchhhhhhhccCCC
Q 006164           48 SSPGNFLSPVMIPPPR-HPSSSLLPRLP---HSPSDAFPPPSPTTTTTTTSLGDFSDDVTAASSPPSAAAAAARVRGRGS  123 (658)
Q Consensus        48 ~~~~~~~~~v~~p~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (658)
                      ++.+|+++|+|||++| |.+|.+...+-   ..+.....+..+ .       +.+.  ++...++..+. .         
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~kk~~k~~~~ep~~~-~-------~~~~--~p~~~t~s~~~-~---------   74 (556)
T KOG1467|consen   15 DKLKELPEPANNPVARLGTIDQVKSERNAKKVAKQAAKEPAQG-E-------DKNA--EPKDLTASAKQ-A---------   74 (556)
T ss_pred             chhhhccccccCccccccchHHHHHHHHHhhcCccccccccCC-C-------cccc--Ccccccccccc-c---------
Confidence            4899999999999999 88888876441   001111111110 0       1111  11111111111 1         


Q ss_pred             cccccccccCCCCCCCCCCCCcCCCCCCCCCCCeeeeeecCCCCCcCCCCCCcceeeccccccCCCcchhhccHHHHHHH
Q 006164          124 SVKQQGAASSFPGGGFEVPPSVKAPSSVPASGLTTVSVVKLPPGISENAGGSVSVEVQSDRALNSKPLKEKTSKAERRAI  203 (658)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kAERRa~  203 (658)
                         ...+..++|.||+|+|...+++   .+                    .++..+.+....+..+..+.+.|+||||++
T Consensus        75 ---~~~~~~s~~~~~~e~t~a~~a~---~~--------------------a~~s~~~~p~~~~~~ka~~~~~t~a~~~a~  128 (556)
T KOG1467|consen   75 ---RVAVKASLPKGGAELTVANKAA---AA--------------------AGSSATQSPKKEKPPKAGLAVPTRAERKAI  128 (556)
T ss_pred             ---ccchhhcccCCcceecccccch---hh--------------------hccccccCCcccCCcccccccccHHHHhhH
Confidence               1456789999999999773222   11                    111223333344556778889999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCchhhhcccCCCCCCCCCCC-CCCCCCccccccccCCCCCcccccccCCCCCCCcccCcHHHH
Q 006164          204 QEAQRAAKAAAKAEGIKTPAATALANAKPTKSTRPSP-QRNDSPVVVAASEKKGGDRSVEKDRKKDVPHPRMQYDDKSRV  282 (658)
Q Consensus       204 QEaqRAaKaa~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~q~dd~~~~  282 (658)
                      ||++||+|+|+|++++........+.+.+......|. .|++.+..+      +..-+.   ++.++++|.+|+++..+.
T Consensus       129 ~Ea~~a~K~a~kg~~~~~a~~~~~~kA~~s~a~~~P~~~k~~~p~~t------~~~~~~---~~~~~~~pq~q~kt~~~~  199 (556)
T KOG1467|consen  129 QEAKRAAKTAEKGEGARKAQVIERAKANASTAPAIPAVKKNALPVTT------SVDQAL---KRRAVQNPQNQAKTLASA  199 (556)
T ss_pred             HHHHHHHHHhhhcccccccccccccccCcccccCCCccccccccccc------cccchH---Hhhcccchhhhhhhhccc
Confidence            9999999999999986421111111111111111122 222211111      111111   577889999999888766


Q ss_pred             HHhhhccccccccccCcccccccCCcceecccCcchhhhhhcccchhHHHHHHHHhhhcccccchhHHHHHHHHHHHHHH
Q 006164          283 QKLKKRSVVKPTEARNRVELFRHLPQYEHGTQLPVLQSKFFQLDTLHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAI  362 (658)
Q Consensus       283 ~k~~r~~v~~~~~~~~~v~lf~hLP~~~~~~~l~~~~~~~~ai~~mHPAI~~LGl~~~~~~I~Gs~araiA~L~A~~~vI  362 (658)
                      . +.|+.|+.+     ++.||+||||+.+..      ..|..+..|||||++||+||+.|+|+|+|+|||+||.+|+++|
T Consensus       200 ~-~~rk~V~~~-----~v~lf~hL~q~~~~t------t~f~~~~~IHPAv~~Lglq~a~~kI~GsnaRCIa~L~afqevi  267 (556)
T KOG1467|consen  200 S-ASRKAVASQ-----KVSLFTHLPQYDRAT------TQFIFLDSIHPAVLRLGLQYALGKISGSNARCIAMLQAFQEVI  267 (556)
T ss_pred             C-ccccccccc-----eehhhhhhhHhhccc------ccccccccccHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHH
Confidence            5 778888765     899999999999875      2355666799999999999999999999999999999999999


Q ss_pred             HhcCCCCccchHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006164          363 RDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADR  442 (658)
Q Consensus       363 ~d~~~p~~~t~~rdL~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~  442 (658)
                      +||++|+++++.|+|..+|+.++.||.+|||++++|||||||||++|..++.++.+.|+|+.|++.|++||+|+|..|++
T Consensus       268 ~Dy~TP~~ktlsrdLt~~i~~qv~~L~~cRPLs~SmgNAiRflK~eI~~L~~s~~e~eaKe~L~~~I~~~i~eki~~A~q  347 (556)
T KOG1467|consen  268 KDYTTPPEKTLSRDLTAAISPQVSFLTQCRPLSISMGNAIRFLKNEISKLPISLSESEAKEELQSDIDRFIAEKIILADQ  347 (556)
T ss_pred             HhccCCCccccchhhHhhhhhHHHHHhhcCCccchhhHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCEEEeeCChHHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHHHHHHHhCCCCEEEEcchHHHHHhhh
Q 006164          443 VIVKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHE  522 (658)
Q Consensus       443 ~Ia~~a~~~I~dgdvILT~g~SsaV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~La~eL~~~GI~vTlI~DsAv~~iM~~  522 (658)
                      .|++++.++|+|||+|||||+|++|+++|.+||+.|++|+|+|+||||.+||++|+++|.+.||+|||+++++++|+|.+
T Consensus       348 aI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv~~GinctYv~I~a~syim~e  427 (556)
T KOG1467|consen  348 AISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLRRLVDRGINCTYVLINAASYIMLE  427 (556)
T ss_pred             HHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHHHHHHcCCCeEEEEehhHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccEEEEcceeEecCCCeecccchHHHHHHHHhCCCCeEeecccccccccccccccccccccccccCCCCCccccCCCccc
Q 006164          523 VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDI  602 (658)
Q Consensus       523 Vd~VivGAdaVlaNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~lDs~~~nEi~~IE~~dp~ev~~~~g~~~v  602 (658)
                      |++||||||+|++||.|++|+||+++||+|++|||||+||||+|||++|+|+|++++|||     +||+++..++|+++.
T Consensus       428 vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yKF~eRvQlDsi~~NEL-----~dpn~l~~v~g~~~~  502 (556)
T KOG1467|consen  428 VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYKFHERVQLDSIVSNEL-----GDPNALQEVRGREDK  502 (556)
T ss_pred             cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhhhhhhhhhhhhhhccc-----CChhhhhhccCcchh
Confidence            999999999999999999999999999999999999999999999999999999999999     999999999997778


Q ss_pred             cccCCCcCCCCceeccccccccCCCCccEEEeCCCCCCCCCHHHHHHHhhcCC
Q 006164          603 NHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQ  655 (658)
Q Consensus       603 ~~~~~~~~~~~l~v~Np~FDvTPpeLIt~IITE~Gil~PssV~~ilrey~~~~  655 (658)
                      ..+.+|....+++++|++||+||||||++||||+|+++|++||+|||+|...+
T Consensus       503 ~~L~~wqn~~~L~~lnl~YD~TPpelIs~vVTe~g~lp~TSVPvilr~~~~~~  555 (556)
T KOG1467|consen  503 VALAGWQNNANLKFLNLMYDVTPPELISAVVTELGMLPPTSVPVILREKKLTD  555 (556)
T ss_pred             hhhhccccccccchhheeeccCcHHHHHHHHhhccccCCccchHHHhhhhccc
Confidence            88999999999999999999999999999999999999999999999997654

>TIGR00512 salvage_mtnA S-methyl-5-thioribose-1-phosphate isomerase Back     alignment and domain information
>PRK05720 mtnA methylthioribose-1-phosphate isomerase; Reviewed Back     alignment and domain information
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family Back     alignment and domain information
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>PRK06036 translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>PRK08334 translation initiation factor IF-2B subunit beta; Validated Back     alignment and domain information
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional Back     alignment and domain information
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins Back     alignment and domain information
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit Back     alignment and domain information
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated Back     alignment and domain information
>KOG1468 consensus Predicted translation initiation factor related to eIF-2B alpha/beta/delta subunits (CIG2/IDI2) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1466 consensus Translation initiation factor 2B, alpha subunit (eIF-2Balpha/GCN3) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional Back     alignment and domain information
>PRK00702 ribose-5-phosphate isomerase A; Provisional Back     alignment and domain information
>TIGR00021 rpiA ribose 5-phosphate isomerase Back     alignment and domain information
>cd01398 RPI_A RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway Back     alignment and domain information
>PRK10434 srlR DNA-bindng transcriptional repressor SrlR; Provisional Back     alignment and domain information
>PRK13509 transcriptional repressor UlaR; Provisional Back     alignment and domain information
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional Back     alignment and domain information
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional Back     alignment and domain information
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism Back     alignment and domain information
>PRK10411 DNA-binding transcriptional activator FucR; Provisional Back     alignment and domain information
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10681 DNA-binding transcriptional repressor DeoR; Provisional Back     alignment and domain information
>PLN02384 ribose-5-phosphate isomerase Back     alignment and domain information
>PRK13978 ribose-5-phosphate isomerase A; Provisional Back     alignment and domain information
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0120 RpiA Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2057 AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism] Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion] Back     alignment and domain information
>PRK04311 selenocysteine synthase; Provisional Back     alignment and domain information
>TIGR00474 selA seryl-tRNA(sec) selenium transferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
3vm6_A338 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 7e-26
3a11_A338 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 2e-25
3a9c_F323 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 3e-24
3a9c_E322 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 3e-24
3a9c_A321 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 3e-24
3a9c_B326 Crystal Structure Of Ribose-1,5-Bisphosphate Isomer 4e-23
1vb5_A276 Crystal Structure Analysis Of The Pyrococcus Horiko 2e-12
3ecs_A315 Crystal Structure Of Human Eif2b Alpha Length = 315 3e-09
1t5o_A351 Crystal Structure Of The Translation Initiation Fac 3e-09
2yrf_A374 Crystal Structure Of 5-Methylthioribose 1-Phosphate 1e-05
1t9k_A347 X-ray Crystal Structure Of Aif-2b Alpha Subunit-rel 1e-05
>pdb|3VM6|A Chain A, Crystal Structure Of Ribose-1,5-Bisphosphate Isomerase From Thermococcus Kodakarensis Kod1 In Complex With Alpha-D-Ribose-1,5- Bisphosphate Length = 338 Back     alignment and structure 
Iteration: 1

 Score =  115 bits (288), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 132/266 (49%), Gaps = 17/266 (6%)
Query: 387 FLIDCRPLSVSMGNAIRFLKSQIAKIPISLSE--SEAKATLHSDIERFINEKIILADRVI 444
            L + RP +VS+ NA+R++  +  KI  S      + +  + +  + FI+      +R I
Sbjct: 74  ILFETRPTAVSLPNALRYVMHR-GKIAYSSGADLEQLRFVIINAAKEFIHNSEKALER-I 131
Query: 445 VKHAVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEXXXXXXXXXXX 504
            +    +I DGDV++T+  S A   +++ A E GK  +V++ ++RPK +           
Sbjct: 132 GEFGAKRIEDGDVIMTHSHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASY 191
Query: 505 XXSCTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCE 564
                Y   +A  + +    +V +GA S+  NG V +++GTA +A+ A    +  ++  E
Sbjct: 192 GIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAE 251
Query: 565 AYKFHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDAT 624
            YKFH    L  +   E+      DP  +  +P  E    L  W K  N+++ N  +D T
Sbjct: 252 TYKFHPETMLGQLVEIEM-----RDPTEV--IPEDE----LKTWPK--NIEVWNPAFDVT 298
Query: 625 PSDYVSLIITDYGMIPPTSVPVIVRE 650
           P +YV +IIT+ G+IPP +   I+RE
Sbjct: 299 PPEYVDVIITERGIIPPYAAIDILRE 324
>pdb|3A11|A Chain A, Crystal Structure Of Ribose-1,5-Bisphosphate Isomerase From Thermococcus Kodakaraensis Kod1 Length = 338 Back     alignment and structure
>pdb|1VB5|A Chain A, Crystal Structure Analysis Of The Pyrococcus Horikoshii Ot3 Translation Initiation Factor Eif-2b Length = 276 Back     alignment and structure
>pdb|3ECS|A Chain A, Crystal Structure Of Human Eif2b Alpha Length = 315 Back     alignment and structure
>pdb|1T5O|A Chain A, Crystal Structure Of The Translation Initiation Factor Eif-2b, Subunit Delta, From A. Fulgidus Length = 351 Back     alignment and structure
>pdb|2YRF|A Chain A, Crystal Structure Of 5-Methylthioribose 1-Phosphate Isomerase From Bacillus Subtilis Complexed With Sulfate Ion Length = 374 Back     alignment and structure
>pdb|1T9K|A Chain A, X-ray Crystal Structure Of Aif-2b Alpha Subunit-related Translation Initiation Factor [thermotoga Maritima] Length = 347 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query658
3ecs_A315 Translation initiation factor EIF-2B subunit alpha 8e-87
1vb5_A276 Translation initiation factor EIF-2B; 2.20A {Pyroc 3e-33
3a11_A338 Translation initiation factor EIF-2B, delta subun; 9e-32
2yvk_A374 Methylthioribose-1-phosphate isomerase; methionine 1e-16
1t9k_A347 Probable methylthioribose-1-phosphate isomerase; s 3e-16
1t5o_A351 EIF2BD, translation initiation factor EIF2B, subun 3e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
2a0u_A383 Initiation factor 2B; SGPP, structural genomics, P 8e-12
1w2w_B191 5-methylthioribose-1-phosphate isomerase; EIF2B, m 7e-05
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens} Length = 315 Back     alignment and structure
 Score =  273 bits (700), Expect = 8e-87
 Identities = 67/303 (22%), Positives = 127/303 (41%), Gaps = 20/303 (6%)

Query: 349 ARCIAMLQAFQEAIRDYSTPPAKTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQ 408
           A  +A ++   E ++       + L  +LT+ I +          ++VS G  +      
Sbjct: 21  ASAVAAIRTLLEFLKRDKGETIQGLRANLTSAIETLCGV---DSSVAVSSGGELFLRFIS 77

Query: 409 IAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVTKIRDGDVLLTYGSSSAVE 468
           +A +  S   S+ K  +    E F+  +I L+   I     T I+DG  +LT+  S  V 
Sbjct: 78  LASLEYS-DYSKCKKIMIERGELFL-RRISLSRNKIADLCHTFIKDGATILTHAYSRVVL 135

Query: 469 MILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLSCTYTHINAISYIIHEVTRVFL 528
            +L+ A    K+F V + +S+P   GK + + L    +  T     A+ YI+ +   V +
Sbjct: 136 RVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDAAVGYIMEKADLVIV 195

Query: 529 GASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAG 588
           GA  V+ NG + +++GT  +A+ A   + P  V  E++KF     L+             
Sbjct: 196 GAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLN------------Q 243

Query: 589 DPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIV 648
                      +    L      ++L+  +   D T    ++L+ TD G++ P++V   +
Sbjct: 244 QDVPDKFKYKAD---TLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDEL 300

Query: 649 REY 651
            + 
Sbjct: 301 IKL 303
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5 Length = 276 Back     alignment and structure
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A* Length = 338 Back     alignment and structure
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A* Length = 374 Back     alignment and structure
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5 Length = 347 Back     alignment and structure
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5 Length = 351 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5 Length = 383 Back     alignment and structure
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5 Length = 191 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query658
2yvk_A374 Methylthioribose-1-phosphate isomerase; methionine 100.0
3a11_A338 Translation initiation factor EIF-2B, delta subun; 100.0
2a0u_A383 Initiation factor 2B; SGPP, structural genomics, P 100.0
1t9k_A347 Probable methylthioribose-1-phosphate isomerase; s 100.0
1t5o_A351 EIF2BD, translation initiation factor EIF2B, subun 100.0
3ecs_A315 Translation initiation factor EIF-2B subunit alpha 100.0
1vb5_A276 Translation initiation factor EIF-2B; 2.20A {Pyroc 100.0
1w2w_B191 5-methylthioribose-1-phosphate isomerase; EIF2B, m 100.0
1w2w_A211 5-methylthioribose-1-phosphate isomerase; EIF2B, m 99.88
1uj6_A227 Ribose 5-phosphate isomerase; enzyme-inhibitor com 98.03
2f8m_A244 Ribose 5-phosphate isomerase; structural genomics, 97.72
1lk5_A229 D-ribose-5-phosphate isomerase; alpha/beta structu 97.63
1m0s_A219 Ribose-5-phosphate isomerase A; D-ribose 5-phospha 97.61
3kwm_A224 Ribose-5-phosphate isomerase A; structural genomic 97.54
3hhe_A255 Ribose-5-phosphate isomerase A; niaid, ssgcid, dec 97.31
1xtz_A264 Ribose-5-phosphate isomerase; yeast; 2.10A {Saccha 97.28
1o8b_A219 Ribose 5-phosphate isomerase; RPIA, PSI, protein S 97.21
3l7o_A225 Ribose-5-phosphate isomerase A; RPIA; 1.70A {Strep 97.12
2pjm_A226 Ribose-5-phosphate isomerase A; 3D-structure, stru 96.92
3uw1_A239 Ribose-5-phosphate isomerase A; ssgcid, seattle st 96.64
4gmk_A228 Ribose-5-phosphate isomerase A; D-ribose-5-phospha 90.05
3ixq_A226 Ribose-5-phosphate isomerase A; structural genomic 84.91
3rrl_A235 Succinyl-COA:3-ketoacid-coenzyme A transferase SU; 83.0
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A* Back     alignment and structure
Probab=100.00  E-value=3.5e-71  Score=593.40  Aligned_cols=321  Identities=21%  Similarity=0.352  Sum_probs=285.7

Q ss_pred             cCccccc--ccCCcceecccCcchhhhhhcccch----hHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHhcCCCCc
Q 006164          297 RNRVELF--RHLPQYEHGTQLPVLQSKFFQLDTL----HPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIRDYSTPPA  370 (658)
Q Consensus       297 ~~~v~lf--~hLP~~~~~~~l~~~~~~~~ai~~m----HPAI~~LGl~~~~~~I~Gs~araiA~L~A~~~vI~d~~~p~~  370 (658)
                      .++|.||  +.||++++|+.|.+++++|.+|+.|    +|+|              +.++|+++++++++..    +   
T Consensus        36 ~~~l~ilDq~~lP~~~~~~~~~~~~~~~~aIk~m~VrGApaI--------------giaaa~~l~l~~~~~~----~---   94 (374)
T 2yvk_A           36 ETAITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAI--------------GITAAFGLALAAKDIE----T---   94 (374)
T ss_dssp             SSCEEEECGGGTTTCCCEEEECSHHHHHHHHHTTSSCSHHHH--------------HHHHHHHHHHHHTTCC----C---
T ss_pred             CCEEEEEecCCCCCeEEEEEeCCHHHHHHHHHhCccCCcHHH--------------HHHHHHHHHHHHHhcc----C---
Confidence            3479999  9999999999999999999999999    6998              4488899988876531    1   


Q ss_pred             cchHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006164          371 KTLSRDLTAKISSYVSFLIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKHAVT  450 (658)
Q Consensus       371 ~t~~rdL~~~L~~~i~~L~~aRPtsVsmgNAIr~lk~~I~~~~~~~~~~eaKe~L~e~Id~fi~E~i~~a~~~Ia~~a~~  450 (658)
                       ...++|.+.|+.++++|.++|||++||+|+++++++.+.+.   .+.+++|+.+++.+++|++|. ..+++.|+++|++
T Consensus        95 -~~~~~l~~~l~~~~~~L~~aRPtavnL~~ai~r~~~~i~~~---~~~~~~k~~l~~~a~~~~~e~-~~~~~~I~~~g~~  169 (374)
T 2yvk_A           95 -DNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVENA---ISVNEAKTNLVHEAIQIQVED-EETCRLIGQNALQ  169 (374)
T ss_dssp             -SCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTTTC---SSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHGG
T ss_pred             -CCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence             23578999999999999999999999999999999888643   357889999999999999985 5699999999999


Q ss_pred             hccCCCEEEeeCCh--------HHHHHHHHHHHHcCCeeEEEEeCCCCCchHHHH-HHHHHhCCCCEEEEcchHHHHHhh
Q 006164          451 KIRDGDVLLTYGSS--------SAVEMILQHAHELGKQFRVVIVDSRPKHEGKLL-LRRLVRKGLSCTYTHINAISYIIH  521 (658)
Q Consensus       451 ~I~dgdvILT~g~S--------saV~~vL~~A~e~gk~f~ViV~ESRP~~EG~~L-a~eL~~~GI~vTlI~DsAv~~iM~  521 (658)
                      +|++|++|||||||        .++.++|+.|+++|++|+|||+||||++||.+| +|+|.+.||+||||+|||++|+|+
T Consensus       170 ~I~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~V~v~EtRP~~qG~rltA~eL~~~GIpvtlI~Dsa~~~~M~  249 (374)
T 2yvk_A          170 LFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMK  249 (374)
T ss_dssp             GCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHTTCCCEEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHH
T ss_pred             HhCCCCEEEEecCCCccccCCCcHHHHHHHHHHHcCCEEEEEEeCCCCccccHHHHHHHHHHcCCCEEEEehhHHHHHhh
Confidence            99999999999976        356699999999999999999999999999874 799999999999999999999999


Q ss_pred             h--ccEEEEcceeEecCCCeecccchHHHHHHHHhCCCCeEeecccccccccccccccccccccccccCCCCCccccCCC
Q 006164          522 E--VTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYKFHERVQLDSICSNELGVLLAGDPDSISKVPGR  599 (658)
Q Consensus       522 ~--Vd~VivGAdaVlaNG~VvNKiGT~~lAl~Ak~~~VPVyV~aetyKf~~~~~lDs~~~nEi~~IE~~dp~ev~~~~g~  599 (658)
                      +  ||+||||||+|++||+++||+|||++|++||+||||||||||+|||++.++.+    .++ +||+|||+|+..+.|.
T Consensus       250 ~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPfyV~ap~~k~d~~~~~g----~~i-~iEer~~~Ev~~~~g~  324 (374)
T 2yvk_A          250 EKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCG----ADI-PIEERDPEEVRQISGV  324 (374)
T ss_dssp             HTTCCEEEECCSEEETTCCEEEETTHHHHHHHHHHTTCCEEEECCGGGEETTCSSG----GGS-CCCBCCTHHHHEETTE
T ss_pred             hcCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecccceeCccCCCc----ccc-ccccCCHHHhcccCCc
Confidence            8  99999999999999999999999999999999999999999999999988754    456 8899999999876542


Q ss_pred             ccccccCCCcCCCCceeccccccccCCCCccEEEeCCCCCCCCCHHHHHHHhhcCCC
Q 006164          600 EDINHLDGWDKSENLQLLNLIYDATPSDYVSLIITDYGMIPPTSVPVIVREYGRGQL  656 (658)
Q Consensus       600 ~~v~~~~~~~~~~~l~v~Np~FDvTPpeLIt~IITE~Gil~PssV~~ilrey~~~~~  656 (658)
                              +..+++++++||+|||||++|||+||||.|+++|++...+.+-|..+++
T Consensus       325 --------~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~P~~~~~l~~~~~~~~~  373 (374)
T 2yvk_A          325 --------RTAPSNVPVFNPAFDITPHDLISGIITEKGIMTGNYEEEIEQLFKGEKV  373 (374)
T ss_dssp             --------ECSCTTCCBCCBSEEEECGGGCSEEEETTEEECSCHHHHHHHHTCC---
T ss_pred             --------eecCCCcceeCcceeccCHHHCCEEeccCCccCcchHHHHHHHhhhccC
Confidence                    3567899999999999999999999999999999988877766665543
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A* Back     alignment and structure
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5 Back     alignment and structure
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5 Back     alignment and structure
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5 Back     alignment and structure
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens} Back     alignment and structure
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5 Back     alignment and structure
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5 Back     alignment and structure
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5 Back     alignment and structure
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A* Back     alignment and structure
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum} Back     alignment and structure
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A* Back     alignment and structure
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1 Back     alignment and structure
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp} Back     alignment and structure
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae} Back     alignment and structure
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A* Back     alignment and structure
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans} Back     alignment and structure
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A* Back     alignment and structure
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius} Back     alignment and structure
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii} Back     alignment and structure
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 658
d1vb5a_274 c.124.1.5 (A:) Putative eIF-2B subunit 2-like prot 1e-48
d2a0ua1374 c.124.1.5 (A:10-383) Initiation factor 2b {Leishma 2e-45
g1w2w.1402 c.124.1.5 (A:,B:) Putative methylthioribose-1-phos 2e-40
d1t5oa_340 c.124.1.5 (A:) Putative eIF-2B delta-subunit {Arch 5e-35
d1t9ka_340 c.124.1.5 (A:) Probable methylthioribose-1-phospha 2e-33
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]} Length = 274 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: IF2B-like
domain: Putative eIF-2B subunit 2-like protein PH0440
species: Pyrococcus horikoshii [TaxId: 53953]

 Score =  169 bits (429), Expect = 1e-48
 Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 38/258 (14%)

Query: 388 LIDCRPLSVSMGNAIRFLKSQIAKIPISLSESEAKATLHSDIERFINEKIILADRVIVKH 447
           ++   P   S+ N  RF+             +  +  L S    F+   +  A R +   
Sbjct: 54  VVKVNPSMASLYNLARFI-----------PVTNRRDILKSRALEFLRR-MEEAKRELASI 101

Query: 448 AVTKIRDGDVLLTYGSSSAVEMILQHAHELGKQFRVVIVDSRPKHEGKLLLRRLVRKGLS 507
               I DGDV++T+  SS V  I++ A E  K+F+V++ +S P +EG  L R L   G+ 
Sbjct: 102 GAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIE 161

Query: 508 CTYTHINAISYIIHEVTRVFLGASSVLSNGTVCSRVGTACVAMVAYGFHIPVLVCCEAYK 567
                   +     E +   +GA  +  +G V ++ GT  +A+  +   IP  V  E YK
Sbjct: 162 FEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYK 221

Query: 568 FHERVQLDSICSNELGVLLAGDPDSISKVPGREDINHLDGWDKSENLQLLNLIYDATPSD 627
           FH  ++   +   E  ++                           N+++ N+++D TP  
Sbjct: 222 FHPTLKSGDVMLMERDLI-------------------------RGNVRIRNVLFDVTPWK 256

Query: 628 YVSLIITDYGMI-PPTSV 644
           YV  IIT+ G++ PP  +
Sbjct: 257 YVRGIITELGIVIPPRDI 274
>d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} Length = 374 Back     information, alignment and structure
>d1t5oa_ c.124.1.5 (A:) Putative eIF-2B delta-subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 340 Back     information, alignment and structure
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query658
g1w2w.1402 Putative methylthioribose-1-phosphate isomerase Yp 100.0
d1t5oa_340 Putative eIF-2B delta-subunit {Archaeon Archaeoglo 100.0
d2a0ua1374 Initiation factor 2b {Leishmania major [TaxId: 566 100.0
d1t9ka_340 Probable methylthioribose-1-phosphate isomerase TM 100.0
d1vb5a_274 Putative eIF-2B subunit 2-like protein PH0440 {Pyr 100.0
d1m0sa1147 D-ribose-5-phosphate isomerase (RpiA), catalytic d 96.85
d1uj4a1151 D-ribose-5-phosphate isomerase (RpiA), catalytic d 96.65
d1lk5a1149 D-ribose-5-phosphate isomerase (RpiA), catalytic d 96.43
>d1t5oa_ c.124.1.5 (A:) Putative eIF-2B delta-subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2a0ua1 c.124.1.5 (A:10-383) Initiation factor 2b {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1t9ka_ c.124.1.5 (A:) Probable methylthioribose-1-phosphate isomerase TM0911 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1m0sa1 c.124.1.4 (A:1-126,A:199-219) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1uj4a1 c.124.1.4 (A:3-131,A:206-227) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lk5a1 c.124.1.4 (A:1-130,A:211-229) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure