Citrus Sinensis ID: 006183

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------
MGVNSNRVEDFSSHETSIRIPSTNTISPPMEIHSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKAQP
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccc
cccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHcccccccHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHcccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccEEEEcHHHcccccccccEEEEEEcccEHHccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccHHHHcccccEEEEHHHHHHHHHHHHcccc
mgvnsnrvedfsshetsiripstntisppmeihsvclppkkttLQKLKHRlseiffpddplyrfknqQWCKKLILALQFLFpilqwgpdynlklfrSDIISGLTIAslaipqgisyaklanlppivglyssfvpplIYSIlgssrhlgvgpvSIASLVMGSMLGeavsysqdpILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMssvfnqrdewswKTVVMGFSFLVFLLTTrqismrkpklfwvsaaapLTSVILSTLIVFCLKSKahgisiighlpkglnppssnmlsfngPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAgsctscyvttgsfsrsavnynagaqsaVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHvtrpntvamgnipgthiYQSLNRYREALRVSSFLILAVespiyfanSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLanpvgsvteklhqskvlesfglnglyLTVGEAVADISALWKAQP
mgvnsnrvedfsshetsiripstntisppmeiHSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTrpntvamgniPGTHIYQSLNRYREALRVSSFLILAVEspiyfanstYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKAQP
MGVNSNRVEDFSSHETSIRIPSTNTISPPMEIHSVClppkkttlqklkHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPIlylelaftatffaglfqaSLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQsavsnvvmasavlvTLLFLMPLFYYTPNvilaaiiitavigliDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQerilrwireeeewieANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKAQP
********************************HSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLN***SNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWI*************TLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALW****
******************************************************FFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALW****
*****************IRIPSTNTISPPMEIHSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKAQP
*****************************MEIHSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWK***
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MGVNSNRVEDFSSHETSIRIPSTNTISPPMEIHSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKAQP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query657 2.2.26 [Sep-21-2011]
Q9LW86653 Probable sulfate transpor yes no 0.989 0.995 0.780 0.0
Q9SXS2631 Probable sulfate transpor no no 0.945 0.984 0.659 0.0
Q9SV13658 Sulfate transporter 3.1 O no no 0.951 0.949 0.575 0.0
O04289646 Sulfate transporter 3.2 O no no 0.939 0.955 0.558 0.0
P53391667 High affinity sulfate tra N/A no 0.964 0.950 0.522 0.0
P53392662 High affinity sulfate tra N/A no 0.936 0.929 0.526 0.0
Q9SAY1649 Sulfate transporter 1.1 O no no 0.945 0.956 0.532 0.0
Q9FEP7656 Sulfate transporter 1.3 O no no 0.942 0.943 0.537 0.0
Q9MAX3653 Sulfate transporter 1.2 O no no 0.952 0.958 0.534 1e-180
Q94LW6634 Probable sulfate transpor no no 0.896 0.929 0.474 1e-170
>sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1 Back     alignment and function desciption
 Score = 1056 bits (2731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/660 (78%), Positives = 577/660 (87%), Gaps = 10/660 (1%)

Query: 1   MGVNSNRVEDFSSHETSIRIPSTNTISPPM-EIHSVCLPPKKTTLQKLKHRLSEIFFPDD 59
           MG  +NRVED +S       P+  T    + EIHSVCLPPKKT  QKLK R+ ++FFPDD
Sbjct: 1   MGHGTNRVEDMAS-------PNNGTAGETVVEIHSVCLPPKKTAFQKLKKRVGDVFFPDD 53

Query: 60  PLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKL 119
           PL RF+NQ W  ++IL LQ LFPI  WG  Y+LKL RSD+ISGLTIASLAIPQGISYAKL
Sbjct: 54  PLQRFRNQTWRNRVILGLQSLFPIFTWGSQYDLKLLRSDVISGLTIASLAIPQGISYAKL 113

Query: 120 ANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLEL 179
           ANLPPIVGLYSSFVPPLIY++LGSSRHL VGPVSIASLVMGSML E+VS +QD ILYL+L
Sbjct: 114 ANLPPIVGLYSSFVPPLIYAVLGSSRHLAVGPVSIASLVMGSMLSESVSPTQDSILYLKL 173

Query: 180 AFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSK 239
           AFT+TFFAG+FQASLGLLRLGF+IDFLSKATL+GF AGAAVIVSLQQLKGLLGIVHFT K
Sbjct: 174 AFTSTFFAGVFQASLGLLRLGFMIDFLSKATLIGFTAGAAVIVSLQQLKGLLGIVHFTGK 233

Query: 240 MQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILS 299
           MQ +PVMSSVFN R EWSW+T+VMG  FL  LLTTR ISMRKPKLFW+SAA+PL SVI+S
Sbjct: 234 MQIVPVMSSVFNHRSEWSWETIVMGIGFLSILLTTRHISMRKPKLFWISAASPLASVIIS 293

Query: 300 TLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAV 359
           TL+V+ ++SK H IS IGHLPKGLNPPS NML F+G  LA+AIKTG++TGILSLTEGIAV
Sbjct: 294 TLLVYLIRSKTHAISFIGHLPKGLNPPSLNMLYFSGAHLALAIKTGIITGILSLTEGIAV 353

Query: 360 GRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVM 419
           GRTFA+LKNYQV+GNKEMMAIGFMN+AGSCTSCYVTTGSFSRSAVNYNAGA++AVSN+VM
Sbjct: 354 GRTFASLKNYQVNGNKEMMAIGFMNMAGSCTSCYVTTGSFSRSAVNYNAGAKTAVSNIVM 413

Query: 420 ASAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFG 479
           ASAVLVTLLFLMPLFYYTPNVILAAII+TAVIGLIDYQAA++LWKVDK DF  C CSFFG
Sbjct: 414 ASAVLVTLLFLMPLFYYTPNVILAAIILTAVIGLIDYQAAYKLWKVDKFDFFTCLCSFFG 473

Query: 480 VLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLIL 539
           VLF+SVPLGLAIAV VSV KILLHVTRPNT   GNIPGT IYQSL RYREA R+  FLIL
Sbjct: 474 VLFVSVPLGLAIAVAVSVIKILLHVTRPNTSEFGNIPGTQIYQSLGRYREASRIPGFLIL 533

Query: 540 AVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCE 599
           A+ESPIYFANSTYLQ+RILRW REEE  I+ NN +TLKCIILDMTAV+AIDTSG++ V E
Sbjct: 534 AIESPIYFANSTYLQDRILRWAREEENRIKENNGTTLKCIILDMTAVSAIDTSGLEAVFE 593

Query: 600 LRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKA--QP 657
           LR+ LEKQSLQLVL NPVG+V EKLH+SK++E+ GL+GLYLTVGEAVAD+S+ WKA  QP
Sbjct: 594 LRRRLEKQSLQLVLVNPVGTVMEKLHKSKIIEALGLSGLYLTVGEAVADLSSTWKANGQP 653
H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2 Back     alignment and function description
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function description
>sp|O04289|SUT32_ARATH Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAX3|SUT12_ARATH Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1 Back     alignment and function description
>sp|Q94LW6|SUT35_ARATH Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query657
224070883656 sulfate/bicarbonate/oxalate exchanger an 0.998 1.0 0.858 0.0
255574560662 sulfate transporter, putative [Ricinus c 0.998 0.990 0.853 0.0
81176629639 putative sulfate transporter, partial [P 0.968 0.995 0.861 0.0
359482948664 PREDICTED: probable sulfate transporter 1.0 0.989 0.826 0.0
81176631639 putative sulfate transporter, partial [P 0.968 0.995 0.855 0.0
147800076664 hypothetical protein VITISV_043810 [Viti 1.0 0.989 0.826 0.0
224054198699 sulfate/bicarbonate/oxalate exchanger an 0.992 0.932 0.809 0.0
356556062652 PREDICTED: probable sulfate transporter 0.992 1.0 0.809 0.0
297743297631 unnamed protein product [Vitis vinifera] 0.958 0.998 0.844 0.0
225442671634 PREDICTED: probable sulfate transporter 0.961 0.996 0.838 0.0
>gi|224070883|ref|XP_002303279.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222840711|gb|EEE78258.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1168 bits (3021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/657 (85%), Positives = 614/657 (93%), Gaps = 1/657 (0%)

Query: 1   MGVNSNRVEDFSSHETSIRIPSTNTISPPMEIHSVCLPPKKTTLQKLKHRLSEIFFPDDP 60
           MGVNSNRVEDFSS ET++RI +T +I P MEIH+VCLPPKKTTLQKLK RL EIFFPDDP
Sbjct: 1   MGVNSNRVEDFSSQETTLRI-TTESIVPGMEIHNVCLPPKKTTLQKLKQRLGEIFFPDDP 59

Query: 61  LYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLA 120
           LYRFKNQ WCKKL+L LQFLFPI QWGP+Y+L+L RSDIISGLTIASLAIPQGISYAKLA
Sbjct: 60  LYRFKNQTWCKKLLLGLQFLFPIFQWGPEYSLRLLRSDIISGLTIASLAIPQGISYAKLA 119

Query: 121 NLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELA 180
           NLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSML E VS   +PILYL+LA
Sbjct: 120 NLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLSETVSPHDEPILYLKLA 179

Query: 181 FTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKM 240
           FTATFFAGLFQASLG LRLGF+IDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFT+KM
Sbjct: 180 FTATFFAGLFQASLGFLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTTKM 239

Query: 241 QFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILST 300
           QFIPV+SSVFN RDEWSW+T+V+G SFLVFLLT+R ISM++PKLFWVSAAAPLTSVILST
Sbjct: 240 QFIPVISSVFNHRDEWSWQTIVVGVSFLVFLLTSRHISMKRPKLFWVSAAAPLTSVILST 299

Query: 301 LIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVG 360
           ++V C K K H ISIIG+LPKGLNPPS+NMLSF+GP LA+AIKTG+VTGILSLTEGIAVG
Sbjct: 300 ILVLCFKLKTHKISIIGYLPKGLNPPSANMLSFSGPDLALAIKTGIVTGILSLTEGIAVG 359

Query: 361 RTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMA 420
           RTFAALKNYQVDGNKEMMAIG MN+AGSC+ CYVTTGSFSRSAVNYNAGAQ+AVSN++MA
Sbjct: 360 RTFAALKNYQVDGNKEMMAIGLMNMAGSCSLCYVTTGSFSRSAVNYNAGAQTAVSNIIMA 419

Query: 421 SAVLVTLLFLMPLFYYTPNVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGV 480
           +AVLVTLLFLMPLFYYTPNVIL AII+TAVIGLIDYQAA+RLWKVDKLDFLAC CSFFGV
Sbjct: 420 TAVLVTLLFLMPLFYYTPNVILGAIIVTAVIGLIDYQAAYRLWKVDKLDFLACMCSFFGV 479

Query: 481 LFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILA 540
           LFISVP GL IAVGVSVFKILLHVTRPNT+ MGNI GT++YQ L RY+E  RV SFLILA
Sbjct: 480 LFISVPSGLGIAVGVSVFKILLHVTRPNTLIMGNIRGTNVYQCLGRYKETSRVPSFLILA 539

Query: 541 VESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCEL 600
           +ESPIYFANSTYLQERILRWIREEE+WI+ANNE TLKC+ILDMTAVTAIDTSGID+VCEL
Sbjct: 540 IESPIYFANSTYLQERILRWIREEEDWIKANNEGTLKCVILDMTAVTAIDTSGIDLVCEL 599

Query: 601 RKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKAQP 657
           RK+LEK+S +LVLANPVGSV EKLHQSK L+SFGLNG+YLTVGEAVADISALWK+QP
Sbjct: 600 RKMLEKRSFKLVLANPVGSVMEKLHQSKTLDSFGLNGIYLTVGEAVADISALWKSQP 656

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255574560|ref|XP_002528191.1| sulfate transporter, putative [Ricinus communis] gi|223532403|gb|EEF34198.1| sulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|81176629|gb|ABB59575.1| putative sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|359482948|ref|XP_003632863.1| PREDICTED: probable sulfate transporter 3.4-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|81176631|gb|ABB59576.1| putative sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|147800076|emb|CAN70927.1| hypothetical protein VITISV_043810 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054198|ref|XP_002298140.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222845398|gb|EEE82945.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356556062|ref|XP_003546346.1| PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297743297|emb|CBI36164.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442671|ref|XP_002284768.1| PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query657
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.989 0.995 0.687 2.7e-235
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.945 0.984 0.580 1e-187
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.926 0.925 0.513 6e-167
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.908 0.924 0.496 6.3e-156
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.916 0.917 0.477 8.8e-150
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.910 0.915 0.479 3.1e-147
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.908 0.919 0.469 1.9e-145
TAIR|locus:2183139634 SULTR3;5 "sulfate transporter 0.894 0.927 0.409 9.1e-132
TAIR|locus:2029496677 AST56 [Arabidopsis thaliana (t 0.891 0.865 0.431 5.5e-125
TAIR|locus:2184158677 SULTR2;1 "sulfate transporter 0.884 0.858 0.419 6.5e-122
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2269 (803.8 bits), Expect = 2.7e-235, P = 2.7e-235
 Identities = 454/660 (68%), Positives = 508/660 (76%)

Query:     1 MGVNSNRVEDFSSHETSIRIPSTNTISPPM-EIHSVCXXXXXXXXXXXXHRLSEIFFPDD 59
             MG  +NRVED +S       P+  T    + EIHSVC             R+ ++FFPDD
Sbjct:     1 MGHGTNRVEDMAS-------PNNGTAGETVVEIHSVCLPPKKTAFQKLKKRVGDVFFPDD 53

Query:    60 PLYRFKNQQWCKKLILALQFLFPILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKL 119
             PL RF+NQ W  ++IL LQ LFPI  WG  Y+LKL RSD+ISGLTIASLAIPQGISYAKL
Sbjct:    54 PLQRFRNQTWRNRVILGLQSLFPIFTWGSQYDLKLLRSDVISGLTIASLAIPQGISYAKL 113

Query:   120 ANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPIXXXXX 179
             ANLPPIVGLYSSFVPPLIY++LGSSRHL VGPVSIASLVMGSML E+VS +QD I     
Sbjct:   114 ANLPPIVGLYSSFVPPLIYAVLGSSRHLAVGPVSIASLVMGSMLSESVSPTQDSILYLKL 173

Query:   180 XXXXXXXXXXXXXSLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSK 239
                          SLGLLRLGF+IDFLSKATL+GF AGAAVIVSLQQLKGLLGIVHFT K
Sbjct:   174 AFTSTFFAGVFQASLGLLRLGFMIDFLSKATLIGFTAGAAVIVSLQQLKGLLGIVHFTGK 233

Query:   240 MQFIPVMSSVFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILS 299
             MQ +PVMSSVFN R EWSW+T+VMG  FL  LLTTR ISMRKPKLFW+SAA+PL SVI+S
Sbjct:   234 MQIVPVMSSVFNHRSEWSWETIVMGIGFLSILLTTRHISMRKPKLFWISAASPLASVIIS 293

Query:   300 TLIVFCLKSKAHGISIIGHLPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAV 359
             TL+V+ ++SK H IS IGHLPKGLNPPS NML F+G  LA+AIKTG++TGILSLTEGIAV
Sbjct:   294 TLLVYLIRSKTHAISFIGHLPKGLNPPSLNMLYFSGAHLALAIKTGIITGILSLTEGIAV 353

Query:   360 GRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQXXXXXXXX 419
             GRTFA+LKNYQV+GNKEMMAIGFMN+AGSCTSCYVTTGSFSRSAVNYNAGA+        
Sbjct:   354 GRTFASLKNYQVNGNKEMMAIGFMNMAGSCTSCYVTTGSFSRSAVNYNAGAKTAVSNIVM 413

Query:   420 XXXXXXTLLFLMPLFYYTPNXXXXXXXXXXXXXXXDYQAAFRLWKVDKLDFLACSCSFFG 479
                   TLLFLMPLFYYTPN               DYQAA++LWKVDK DF  C CSFFG
Sbjct:   414 ASAVLVTLLFLMPLFYYTPNVILAAIILTAVIGLIDYQAAYKLWKVDKFDFFTCLCSFFG 473

Query:   480 VLFISVPLGLAIAVGVSVFKILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLIL 539
             VLF+SVPLGLAIAV VSV KILLHVTRPNT   GNIPGT IYQSL RYREA R+  FLIL
Sbjct:   474 VLFVSVPLGLAIAVAVSVIKILLHVTRPNTSEFGNIPGTQIYQSLGRYREASRIPGFLIL 533

Query:   540 AVESPIYFANSTYLQXXXXXXXXXXXXXXXANNESTLKCIILDMTAVTAIDTSGIDMVCE 599
             A+ESPIYFANSTYLQ                NN +TLKCIILDMTAV+AIDTSG++ V E
Sbjct:   534 AIESPIYFANSTYLQDRILRWAREEENRIKENNGTTLKCIILDMTAVSAIDTSGLEAVFE 593

Query:   600 LRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALWKA--QP 657
             LR+ LEKQSLQLVL NPVG+V EKLH+SK++E+ GL+GLYLTVGEAVAD+S+ WKA  QP
Sbjct:   594 LRRRLEKQSLQLVLVNPVGTVMEKLHKSKIIEALGLSGLYLTVGEAVADLSSTWKANGQP 653
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008271 "secondary active sulfate transmembrane transporter activity" evidence=IEA
GO:0008272 "sulfate transport" evidence=IEA
GO:0015116 "sulfate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009506 "plasmodesma" evidence=IDA
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183139 SULTR3;5 "sulfate transporter 3;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029496 AST56 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184158 SULTR2;1 "sulfate transporter 2;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LW86SUT34_ARATHNo assigned EC number0.78030.98930.9954yesno
P53391SUT1_STYHANo assigned EC number0.52260.96490.9505N/Ano
P53392SUT2_STYHANo assigned EC number0.52670.93600.9290N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_III0366
sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (656 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query657
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 0.0
COG0659554 COG0659, SUL1, Sulfate permease and related transp 1e-105
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 3e-99
pfam1379283 pfam13792, Sulfate_tra_GLY, Sulfate transporter N- 3e-36
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 1e-26
pfam01740106 pfam01740, STAS, STAS domain 2e-21
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 4e-19
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 6e-06
COG1366117 COG1366, SpoIIAA, Anti-anti-sigma regulatory facto 8e-04
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  553 bits (1427), Expect = 0.0
 Identities = 245/567 (43%), Positives = 353/567 (62%), Gaps = 7/567 (1%)

Query: 82  PILQWGPDYNLKLFRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSIL 141
           P+L+W P Y LK F+ D+++GLT+  L IPQ ++YA LA L PI GLY+SFVPP IY++ 
Sbjct: 1   PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALF 60

Query: 142 GSSRHLGVGPVSIASLVMGSMLGEAVSYSQDPILYLELAFTATFFAGLFQASLGLLRLGF 201
           G+SR + +GPV++ SL++GS++             + LAFT T  AG+FQ  LGLLRLGF
Sbjct: 61  GTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGF 120

Query: 202 IIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSSVFN---QRDEWSW 258
           +I+FLS A + GFM GAA+ + L QLKGLLGI  F ++   + V+ S +        W+W
Sbjct: 121 LIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWNW 180

Query: 259 KTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGH 318
            T+V+G   L+FLL T+++  R  KL +  A APL  VIL+TL V     K  G+SI+GH
Sbjct: 181 CTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGH 240

Query: 319 LPKGLNPPSSNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMM 378
           +P GL       ++ +   L       +   I+ L E IA+ R+FA +  Y++D N+E++
Sbjct: 241 IPSGL--SFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELV 298

Query: 379 AIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVMASAVLVTLLFLMPLFYYTP 438
           A G  NI GS  SCY  TGS SR+AVN  AG ++ +S VV A  VL+ LL L PLFYY P
Sbjct: 299 AQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIP 358

Query: 439 NVILAAIIITAVIGLIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVF 498
              LAAIII+AV GLIDY+  ++LWK DK+DF+    +FFGV+F S+ +GL + V +S  
Sbjct: 359 QAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAA 418

Query: 499 KILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERIL 558
            +LL + RP    +G +PGT +Y+S+ +Y  A      L+  V+ P+YFAN+  L++R+L
Sbjct: 419 FLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRLL 478

Query: 559 RWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVG 618
           + I +E           L+ +ILDM+AV  +DTSGI  + ELRK L+ + +QL+LANP  
Sbjct: 479 KRIEDETRRELE--RPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNK 536

Query: 619 SVTEKLHQSKVLESFGLNGLYLTVGEA 645
           +V   L +  ++E  G    + +V +A
Sbjct: 537 AVRSTLKRGGLVELIGEEHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|205965 pfam13792, Sulfate_tra_GLY, Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>gnl|CDD|224285 COG1366, SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 657
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.96
PRK10720428 uracil transporter; Provisional 99.95
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.95
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.94
PF1379284 Sulfate_tra_GLY: Sulfate transporter N-terminal do 99.92
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.91
PRK11412433 putative uracil/xanthine transporter; Provisional 99.87
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.86
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.84
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.76
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.69
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.67
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.6
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.59
TIGR00834900 ae anion exchange protein. They preferentially cat 99.58
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.45
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 99.45
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.41
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.39
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.3
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.26
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 99.15
PF1346680 STAS_2: STAS domain 99.06
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 99.02
COG3135402 BenE Uncharacterized protein involved in benzoate 98.89
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 97.86
COG311399 Predicted NTP binding protein (contains STAS domai 97.65
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 92.5
PRK10720428 uracil transporter; Provisional 90.93
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 90.76
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 90.17
PF1421374 DUF4325: Domain of unknown function (DUF4325) 89.54
TIGR03173406 pbuX xanthine permease. All the seed members of th 89.03
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 88.18
PRK11412433 putative uracil/xanthine transporter; Provisional 86.68
COG0659 554 SUL1 Sulfate permease and related transporters (MF 86.37
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 85.28
PF0934599 DUF1987: Domain of unknown function (DUF1987); Int 81.26
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.9e-110  Score=947.26  Aligned_cols=619  Identities=40%  Similarity=0.669  Sum_probs=556.9

Q ss_pred             cceeecCCCCCchHHHHHHhccccccCCCchhhhhccc--hhHHHHHHHHhhccccccCCCCCh-hhhHhhHHHHHHHHH
Q 006183           31 EIHSVCLPPKKTTLQKLKHRLSEIFFPDDPLYRFKNQQ--WCKKLILALQFLFPILQWGPDYNL-KLFRSDIISGLTIAS  107 (657)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Pi~~wl~~y~~-~~l~~Di~aGltv~~  107 (657)
                      ..+.++.|+.++..++.++..+++...+++.++++++.  ++.++.+.++++||+++|+|+|++ +++.+|++||+|+|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~   92 (665)
T KOG0236|consen   13 SRASVDTPTFDSSNEEEKSSVENTPTRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGS   92 (665)
T ss_pred             ccccccCCCCCcchhhhhccccCccccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeee
Confidence            45666777777777777888888776677788877765  456789999999999999999999 789999999999999


Q ss_pred             HHhhhHhHHHhhhCCCcchhHHHhhhhhHhhhhccCCcccccchhHHHHHHHHHHHhhhhcCCC---ChHHHHHHHHHHH
Q 006183          108 LAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSRHLGVGPVSIASLVMGSMLGEAVSYSQ---DPILYLELAFTAT  184 (657)
Q Consensus       108 ~~iPq~~aya~laglpp~~GL~ss~v~~liy~~~Gss~~~~~Gp~a~~sl~~~~~v~~~~~~~~---~~~~~~~~~~~~~  184 (657)
                      +++||+||||++||+||+|||||+|+|+++|++||||||+++||+|++|+|+++++++..++..   ++..+.++++++|
T Consensus        93 l~VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt  172 (665)
T KOG0236|consen   93 LSVPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLT  172 (665)
T ss_pred             eecchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999988886654333   4456789999999


Q ss_pred             HHHHHHHHHHHhhhhhhHHhhccHhHHHHHHHHHHHHHHHHhhHhhhCccccCCCCChHHHH---HHHHhccCCcchhHH
Q 006183          185 FFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVM---SSVFNQRDEWSWKTV  261 (657)
Q Consensus       185 ~l~Gv~~~~lg~~rlg~l~~~lp~~vi~Gf~~g~gi~i~~~ql~~~lG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  261 (657)
                      |++|++|++||+|||||+++|+|+|++.||++|+|++++.+|+|.++|+++.+.+.+....+   .+.+.+.+++ |.++
T Consensus       173 ~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (665)
T KOG0236|consen  173 FLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKT-LATL  251 (665)
T ss_pred             HHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccccc-chhh
Confidence            99999999999999999999999999999999999999999999999999666555544433   3344444444 7899


Q ss_pred             HHHHHHHHHHHHHHH-hhhcCCcccccccchhHHHHHHHHHHHHHhccCCC-CeeEeecCCCCCCCCCCCCCCCChhhHH
Q 006183          262 VMGFSFLVFLLTTRQ-ISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAH-GISIIGHLPKGLNPPSSNMLSFNGPFLA  339 (657)
Q Consensus       262 ~ig~~~l~~ll~~~~-~~~~~~~~~~i~~~~~li~vi~~t~~~~~~~~~~~-~v~~vg~ip~g~~~p~~p~~~~~~~~~~  339 (657)
                      +++++++++++..|. ..+++++++|+|.|+++++++++|+++|.++.++. ...+++++|.|+|+|++|.+++..    
T Consensus       252 ~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~----  327 (665)
T KOG0236|consen  252 VLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTP----  327 (665)
T ss_pred             hhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhH----
Confidence            999999999999994 44555666679999999999999999999998764 556667999999999999887644    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCcccCCcHHHHHHHHhHhhhhccCCcccccccchhhHhhhcCCCchhHHHHH
Q 006183          340 VAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSAVNYNAGAQSAVSNVVM  419 (657)
Q Consensus       340 ~~~~~~i~~~iv~~~~~~~~~~~~a~~~~~~~d~n~El~a~Gi~Niv~slfg~~p~~~s~srS~v~~~~G~rT~ls~iv~  419 (657)
                      ..+..++.+++++++|+++++|+++++++|++|.||||+|+|++|++||||+|||+++++|||++|.++|+|||++++++
T Consensus       328 ~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~  407 (665)
T KOG0236|consen  328 QVIPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVS  407 (665)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHH
Confidence            56666778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhHhhhchHHHHHHHHHHHHhh-ccCHHHHHHHhhcCccceehhhhhhhhheecccchhhHHHHHHHHH
Q 006183          420 ASAVLVTLLFLMPLFYYTPNVILAAIIITAVIG-LIDYQAAFRLWKVDKLDFLACSCSFFGVLFISVPLGLAIAVGVSVF  498 (657)
Q Consensus       420 a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~-li~~~~~~~l~k~~~~d~~i~~~t~~~~~~~~~~~Gl~~gv~~sl~  498 (657)
                      ++++++++++++|+|+|+|+|+||+|+++++.+ +++.++++++||.+|.|+++|++|++++++.+++.|+++|+++|++
T Consensus       408 ~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~  487 (665)
T KOG0236|consen  408 AALVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLF  487 (665)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHH
Confidence            999999999999999999999999999999999 5799999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccceeeeccccCCccccchhhhhhhhccCceEEEEEccceeEechHHHHHHH--HHHHHHHHH---HHhhccC
Q 006183          499 KILLHVTRPNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERI--LRWIREEEE---WIEANNE  573 (657)
Q Consensus       499 ~~l~~~~~p~~~~lg~~~~~~~~~~~~~~~~~~~~~~v~Iirl~g~L~F~na~~~~~~i--~~~i~~~~~---~~~~~~~  573 (657)
                      .+++|.+||++..+|++++++.|++.+||+++++.++++|+|+++|++|.|.+.+++++  .+++++.+.   ..++...
T Consensus       488 ~ii~~~~~p~~~~l~~~~~t~~~~~~~~y~~~~~~~gi~i~r~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  567 (665)
T KOG0236|consen  488 FIILRSQRPRISLLGRIPRTNIYRDINQYRELKEIPGIKIFRISSPLLFGNVESFEKKLERLKYLRKEEVLENSARELHE  567 (665)
T ss_pred             HHHHHhcCcchhhhcccCCCccccchhhcchhhccCceEEEEeccceeeccHHHHHHHHHHHHhhhhcccccCccccccc
Confidence            99999999999999999999999999999999999999999999999999999998887  355554311   1111222


Q ss_pred             CCccEEEEEccCCCcccHHHHHHHHHHHHHHHhcCCEEEEEcCChhHHHHHHhCCCccccCCcccccCHHHHHHHHHHHH
Q 006183          574 STLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISALW  653 (657)
Q Consensus       574 ~~~~~vIlD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~l~~~~~~v~~~L~~~g~~~~~~~~~if~tv~~Av~~~~~~l  653 (657)
                      ++.+++|+||+.+++||++|+.+|+++.+++++++++++++|++++++++|+++++.+.++++++|+|++||++.|+.++
T Consensus       568 ~~~~~vild~s~v~~iD~~g~~~L~~l~~~~~~~~i~~~~~n~~~~v~~~l~~~~~~~~~~~~~~f~tv~~av~~~~~~~  647 (665)
T KOG0236|consen  568 NSIHSVILDCSGVSFIDTSGASALKSLFKDLKTRGVQVLLANCPSSVREKLSKAGFFDFIGKDNLFLSVHDAVLDAVSEL  647 (665)
T ss_pred             CcceEEEEECCccchhhHHHHHHHHHHHHHHHhcCcEEEEeCCCHHHHHHHHhhccccccchhhhhccHHHHHHHHHHhh
Confidence            34899999999999999999999999999999999999999999999999999999899999999999999999999887


Q ss_pred             h
Q 006183          654 K  654 (657)
Q Consensus       654 ~  654 (657)
                      +
T Consensus       648 ~  648 (665)
T KOG0236|consen  648 S  648 (665)
T ss_pred             h
Confidence            5

>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PF09345 DUF1987: Domain of unknown function (DUF1987); InterPro: IPR018530 This family of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query657
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 3e-05
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure 
Iteration: 1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 507 PNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQXXXXXXXXXXXX 566
           P+   +G +P T +Y  ++ Y E   +    I  + +PIY+ANS                
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYS-------SALKR 54
Query: 567 XXXANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQ 626
               N    +  +ILD T V  +D+ G+  +  + K      + + LA     V   L  
Sbjct: 55  KTGVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114
Query: 627 SKVLESFGLNG-LYLTVGEAV 646
           ++  E+  L   L+ ++ +AV
Sbjct: 115 NRFFENPALKELLFHSIHDAV 135

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query657
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 4e-38
2kln_A130 Probable sulphate-transport transmembrane protein; 1e-34
4dgh_A130 Sulfate permease family protein; STAS domain, anio 1e-25
4dgf_A135 Sulfate transporter sulfate transporter family PR; 6e-21
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 4e-16
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 5e-06
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 3e-05
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 3e-05
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 4e-05
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 6e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
 Score =  137 bits (346), Expect = 4e-38
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 8/146 (5%)

Query: 507 PNTVAMGNIPGTHIYQSLNRYREALRVSSFLILAVESPIYFANSTYLQERILRWIREEEE 566
           P+   +G +P T +Y  ++ Y E   +    I  + +PIY+ANS      + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKTGVNGS 61

Query: 567 WIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVLANPVGSVTEKLHQ 626
                    +  +ILD T V  +D+ G+  +  + K      + + LA     V   L  
Sbjct: 62  E-------NIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114

Query: 627 SKVLESFGLNG-LYLTVGEAVADISA 651
           ++  E+  L   L+ ++ +AV     
Sbjct: 115 NRFFENPALKELLFHSIHDAVLGSQV 140
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Length = 117 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Length = 121 Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Length = 110 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query657
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 99.97
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.91
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.88
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.87
2kln_A130 Probable sulphate-transport transmembrane protein; 99.84
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.76
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.67
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.63
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.62
4hyl_A117 Stage II sporulation protein; structural genomics, 99.61
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.61
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.59
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.49
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.45
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 96.07
3bl4_A124 Uncharacterized protein; structural genomics, join 87.75
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 82.2
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=99.97  E-value=1.5e-29  Score=274.48  Aligned_cols=332  Identities=14%  Similarity=0.069  Sum_probs=250.8

Q ss_pred             hHhhHHHHHHHHHHHhhhHhHHHhhhCCCcchhHHHhhhhhHhhhhccCCc-ccccchh-HHHHHHHHHHHhhhhcCCCC
Q 006183           95 FRSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSILGSSR-HLGVGPV-SIASLVMGSMLGEAVSYSQD  172 (657)
Q Consensus        95 l~~Di~aGltv~~~~iPq~~aya~laglpp~~GL~ss~v~~liy~~~Gss~-~~~~Gp~-a~~sl~~~~~v~~~~~~~~~  172 (657)
                      +++++++|++..+....-.++--.+-|+||..+++++.++++++++++.+| +...|+. +..+.+.. +.. .+     
T Consensus        14 ~~~~i~~GlQh~lam~~~~v~~PlilGl~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~-i~~-~g-----   86 (429)
T 3qe7_A           14 LLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLL-LLP-LG-----   86 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHH-HGG-GC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHhCCCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHH-HHh-cC-----
Confidence            678999999987644333333333349999999999999999999985555 4447873 43333332 222 22     


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh--hhh--hHHhhccHhHHHHHHHHHHHHHHHHhhHhhhCccccCCCCChHHHHHH
Q 006183          173 PILYLELAFTATFFAGLFQASLGLL--RLG--FIIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTSKMQFIPVMSS  248 (657)
Q Consensus       173 ~~~~~~~~~~~~~l~Gv~~~~lg~~--rlg--~l~~~lp~~vi~Gf~~g~gi~i~~~ql~~~lG~~~~~~~~~~~~~~~~  248 (657)
                          ++.+..+.+++|++++++|++  |+|  ++.+++|+.|++.|++.+|+.++..+++..-|... .  .        
T Consensus        87 ----~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~-~--~--------  151 (429)
T 3qe7_A           87 ----YEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA-E--G--------  151 (429)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB-T--T--------
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC-C--C--------
Confidence                677889999999999999998  775  99999999888889999999999999887543211 0  0        


Q ss_pred             HHhccCCcchhHHHHHHHHHHHHHHHHHhhhcCCcccccccchhHHHHHHHHHHHHHhccCCCCeeEeecCC-CCCCCCC
Q 006183          249 VFNQRDEWSWKTVVMGFSFLVFLLTTRQISMRKPKLFWVSAAAPLTSVILSTLIVFCLKSKAHGISIIGHLP-KGLNPPS  327 (657)
Q Consensus       249 ~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~i~~~~~li~vi~~t~~~~~~~~~~~~v~~vg~ip-~g~~~p~  327 (657)
                           +..++.++.++++++++++++.++.|++.|.     ++.|+++++++++++.++..+  .+.+++.| -++|.+.
T Consensus       152 -----~~~~~~~~~la~~tl~iii~~~~~~kg~~~~-----~aiLigivvg~~~a~~~G~~d--~~~v~~a~~~~lP~~~  219 (429)
T 3qe7_A          152 -----QTPDSKTIIISITTLAVTVLGSVLFRGFLAI-----IPILIGVLVGYALSFAMGIVD--TTPIINAHWFALPTLY  219 (429)
T ss_dssp             -----BCCCHHHHHHHHHHHHHHHHHHHSSSTTTTT-----HHHHHHHHHHHHHHHHHHHTT--SSHHHHSCSSCCCCCC
T ss_pred             -----ccccHHHHHHHHHHHHHHHHHHHHhcccchh-----hHHHHHHHHHHHHHHHhcCCC--cccccccccccccCCC
Confidence                 1246678899999998888776655554432     378999999999999987522  22233333 2466666


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc----ccCCcHHHHHHHHhHhhhhccCCcccccccchhh
Q 006183          328 SNMLSFNGPFLAVAIKTGLVTGILSLTEGIAVGRTFAALKNY----QVDGNKEMMAIGFMNIAGSCTSCYVTTGSFSRSA  403 (657)
Q Consensus       328 ~p~~~~~~~~~~~~~~~~i~~~iv~~~~~~~~~~~~a~~~~~----~~d~n~El~a~Gi~Niv~slfg~~p~~~s~srS~  403 (657)
                      .|++++  ..    +...+.++++.+.|++...++.+++.|+    +.+.|||+.++|++|+++++||++|+|++..+.+
T Consensus       220 ~P~f~~--~~----i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~g  293 (429)
T 3qe7_A          220 TPRFEW--FA----ILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIG  293 (429)
T ss_dssp             CCCCCH--HH----HHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHH
T ss_pred             CCcccH--HH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhHH
Confidence            665543  33    3334556778888888888777776654    4467999999999999999999999999878888


Q ss_pred             HhhhcCCCchhHHHHHHHHHHHHHHH--HhhHhhhchHHHHHHHHHHHHhhccCHHHHHHH--hhcCc
Q 006183          404 VNYNAGAQSAVSNVVMASAVLVTLLF--LMPLFYYTPNVILAAIIITAVIGLIDYQAAFRL--WKVDK  467 (657)
Q Consensus       404 v~~~~G~rT~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l--~k~~~  467 (657)
                      +...+|++||++.+++|+++++..++  ++++++.+|.+++||+.++ .++++....++.+  .|++.
T Consensus       294 ~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~-lfg~i~~~Gi~~l~~~~v~~  360 (429)
T 3qe7_A          294 VMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLL-LYGVIGASGIRVLIESKVDY  360 (429)
T ss_dssp             HHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHH-HHHHHHHHHHHHHHHTTSCT
T ss_pred             HHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999888877653  6789999999999997766 9999999999888  67764
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 657
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 4e-12
d1vc1a_110 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 7e-11
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.0 bits (148), Expect = 4e-12
 Identities = 16/115 (13%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 537 LILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDM 596
           LI+ +   +    +  L+E++   +              ++ I+L++  +T +D+SG+ +
Sbjct: 13  LIVRLSGELDHHTAEELREQVTDVLENRA----------IRHIVLNLGQLTFMDSSGLGV 62

Query: 597 VCELRKILEKQSLQLVLANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADISA 651
           +    K ++    Q+V+     +V      S + +      +      A+  +  
Sbjct: 63  ILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKII---RVEADEQFALQALGV 114
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Length = 110 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query657
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.67
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.67
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.65
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus sphaericus [TaxId: 1421]

Probab=99.67  E-value=6.5e-17  Score=140.73  Aligned_cols=102  Identities=17%  Similarity=0.219  Sum_probs=94.5

Q ss_pred             CceEEEEEccceeEechHHHHHHHHHHHHHHHHHHhhccCCCccEEEEEccCCCcccHHHHHHHHHHHHHHHhcCCEEEE
Q 006183          534 SSFLILAVESPIYFANSTYLQERILRWIREEEEWIEANNESTLKCIILDMTAVTAIDTSGIDMVCELRKILEKQSLQLVL  613 (657)
Q Consensus       534 ~~v~Iirl~g~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vIlD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~l  613 (657)
                      +++.|+|++|+|+|+|++++++++.+.+++.          +.+.+|+||++|++||+||+++|.++.++++++|+++++
T Consensus         9 ~~~~vv~~~G~L~~~~a~~~~~~~~~~i~~~----------~~~~vvlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~l   78 (111)
T d1h4xa_           9 RETVVIRLFGELDHHAVEQIRAKISTAIFQG----------AVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTIL   78 (111)
T ss_dssp             TTEEEEEEEEEECHHHHHHHHHHHHHHHHHT----------SCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEEEEEEEEHHHHHHHHHHHHHHHhcC----------CCcEEEEEEECCcccCchHHHHHHHHHHHHHHCCCEEEE
Confidence            4688999999999999999999998876543          579999999999999999999999999999999999999


Q ss_pred             EcCChhHHHHHHhCCCccccCCcccccCHHHHHHHH
Q 006183          614 ANPVGSVTEKLHQSKVLESFGLNGLYLTVGEAVADI  649 (657)
Q Consensus       614 ~~~~~~v~~~L~~~g~~~~~~~~~if~tv~~Av~~~  649 (657)
                      +|+++++++.|+.+|+.+.+    .|.|.+||++..
T Consensus        79 ~~~~~~v~~~l~~~gl~~~~----~~~t~~eAl~~i  110 (111)
T d1h4xa_          79 LNPSPTMRKVFQFSGLGPWM----MDATEEEAIDRV  110 (111)
T ss_dssp             ESCCHHHHHHHHHTTCGGGE----ECSCHHHHHHHT
T ss_pred             ecCCHHHHHHHHHcCCCeEE----eeCCHHHHHHhc
Confidence            99999999999999998776    799999999864
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure