Citrus Sinensis ID: 006235

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-----
MTMTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLLLRQENAEK
ccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHHHHcccccccccEEEEEEEEEccEEEEEEEEEEccEEEEEEEEcccccccccHHHHHHHHHcccccHHHHHHHHHcccccccEEEEEEEccccccccccEEEEEEEEEEcccccccccccccEEEEEEccccEEEEEccEEEccccccccccccccccccccccccccccEEEEEcEEEEEccEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEEcEEEEEccccccccccEEEccccccccccccccccccccccccEEEEEEEEEccccccEEEccEEEEEEEEcccccEEEEcccccccEEEcccccEEEEEEEEEEEcccccEEEEEEEccccEEEEEEEEEEEEEEEEEcccccccccccccEEEcccccccccEEEEEEEEEccccccccEEEEEEEEEEEcccccccccccEEEEEEEEEccHHHHHHHccccccEEEEEcccccccccccEEEEEEEccccccccccccHHHHccccccccEEEEEccccEEcccccccccccccccHHHHcccccccccccEEEEEEEcEEcccccccccccccEEEEEEEEEcccccccccccccccccc
cccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEccccHHHHHHHcccccccccccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEEEEEEccccccccccccEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHccccccccccccccEEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEccccccccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEcccccccccccccccccc
MTMTIPLLVLAFLLQCCcanslyhpldplnpseiNQAKLIVQksklgtlpnltfhsvdleepdkvHVLEWLSkqkrgklnlHRQAKVVLRAGAETHELIVDLAIGsitshniykghgyppfafIEFFrasklpltypkFRESIrhrglnlsevsclpftvgwygehvtnRALKVVCFyrggspnifarpiegisMLVDVDKMQiikytdrlrlplpraegtdytsaktnpdsvicnvtkggftieghkvkwanwdfhvsfdARAGIVISTASIFDDKINKFRRVLYKghvsetfvpymdptnewYFKTFMDLgefgfgraagslqpvidcpsnaeyldgyvagadgqpqqFSRVICIFERFsgnvawrhteinvpgkvirsgepEVSLVVRMVTTVGNYdyvldwefdksgtiKIGVALTGILEMkatsytnndqiteNVYGTLVAENAVAVNHDHFVTYYLdldvdgngnsFVKSKLKTArvsnvrasprkSYWTVVKETAKTEAEARIRlgvepaelLVVNAnqktklgnhvgyrlitgqpvtsllsdddypqiRASYTKYQVWVTAYNkserwaggfytdqsrgddglavWSSRNREIENKDIVLWYTVgfhhipyqedfplmptihggfelrpsnffesnplllrqenaek
MTMTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFhsvdleepdKVHVLEWLskqkrgklnlhrQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKytdrlrlplpraegtdytsaktnpdsvicNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVIStasifddkiNKFRRVLYKghvsetfvpymDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFsgnvawrhteinvpgkvirsgepeVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKsklktarvsnvrasprksywtvVKETAKTEAEARirlgvepaelLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERwaggfytdqsrgddGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNffesnplllrqenaek
MTMTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLLLRQENAEK
***TIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVR***RKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFF**************
*****P*LVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAE**********************FTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARV*NVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVT*LL******QIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNP**********
MTMTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLLLRQENAEK
*TMTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLLLRQ*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTMTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLLLRQENAEK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query655 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.980 0.952 0.498 0.0
P49252667 Primary amine oxidase (Fr N/A no 0.946 0.929 0.503 0.0
Q8H1H9712 Primary amine oxidase OS= no no 0.945 0.869 0.466 1e-167
P46883757 Primary amine oxidase OS= N/A no 0.935 0.809 0.327 1e-85
P80695752 Primary amine oxidase OS= yes no 0.943 0.821 0.326 1e-83
P49250755 Primary amine oxidase OS= yes no 0.943 0.818 0.323 2e-83
Q07123648 Copper methylamine oxidas N/A no 0.906 0.916 0.311 3e-74
Q07121648 Primary amine oxidase OS= N/A no 0.906 0.916 0.311 3e-74
Q59118684 Histamine oxidase OS=Arth N/A no 0.949 0.909 0.282 4e-63
P46881638 Phenylethylamine oxidase N/A no 0.825 0.847 0.277 3e-54
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/658 (49%), Positives = 445/658 (67%), Gaps = 16/658 (2%)

Query: 2   TMTIPLLVLAFLLQCCCANSL-----YHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHS 56
           TM + L  +  LL      S+      HPLDPL   E    + IVQ     +   L FH 
Sbjct: 6   TMRLALFSVLTLLSFHAVVSVTPLHVQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHY 65

Query: 57  VDLEEPDKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGH 116
           + L++P+K HVL +  +     +++ R+  VV    ++THE++++L I SI S NI+ G+
Sbjct: 66  IGLDDPEKDHVLRY--ETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGY 123

Query: 117 GYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVC 176
           G+P  +  E   A KLPL YP F +S++ RGLNLSE+ C  FT+GW+GE    R +++ C
Sbjct: 124 GFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDC 183

Query: 177 FYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNP------ 230
           F +  + NI+ RPI GI+++ D+D M+I++Y DR    +P AE T+Y  +K +P      
Sbjct: 184 FMKESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQ 243

Query: 231 DSVICNVTKG-GFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGH 289
            S+  +  +G GF I GH V WANW FH+ FD RAGIVIS ASI+D + +K RRVLYKG+
Sbjct: 244 HSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGY 303

Query: 290 VSETFVPYMDPTNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQ 349
           +SE FVPY DPT E+YFKTF D GEFGFG +  SL P  DCP +A+++D YV  A+G P 
Sbjct: 304 ISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPI 363

Query: 350 QFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDK 409
                IC+FE++ GN+ WRHTE  +P + I     EV+L+VR + TVGNYD V+DWEF  
Sbjct: 364 LLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKA 422

Query: 410 SGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGN 469
           SG+IK  +AL+GILE+K T+  + D+I E+++G LV+ N++ + HDHF  YYLD D+DG 
Sbjct: 423 SGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGT 482

Query: 470 GNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTK 529
            NSF K+ LKT R+ +  +S RKSYWT   +TAKTE++A+I +G+ PAEL+VVN N KT 
Sbjct: 483 HNSFEKTSLKTVRIKD-GSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTA 541

Query: 530 LGNHVGYRLITGQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDD 589
           +GN VGYRLI   P   LL++DDYPQIR ++T Y VWVTAYN++E+WAGG Y D SRGDD
Sbjct: 542 VGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDD 601

Query: 590 GLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLL 647
            LAVW+ +NREI NKDIV+W+ VG HH+P QEDFP+MP +   FELRP+NFFE NP+L
Sbjct: 602 TLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVL 659

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query655
255551471648 Amine oxidase [copper-containing] precur 0.983 0.993 0.743 0.0
224108051631 predicted protein [Populus trichocarpa] 0.958 0.995 0.741 0.0
359477345647 PREDICTED: primary amine oxidase-like [V 0.981 0.993 0.689 0.0
357444251 1402 Primary amine oxidase [Medicago truncatu 0.992 0.463 0.681 0.0
356575839652 PREDICTED: primary amine oxidase-like [G 0.983 0.987 0.677 0.0
356534213683 PREDICTED: primary amine oxidase-like [G 0.983 0.942 0.683 0.0
17865165649 diamine oxidase [Brassica juncea] 0.981 0.990 0.663 0.0
449444991652 PREDICTED: primary amine oxidase-like [C 0.963 0.967 0.665 0.0
2654118668 copper amine oxidase [Arabidopsis thalia 0.984 0.965 0.660 0.0
15233621650 amine oxidase 1 [Arabidopsis thaliana] g 0.983 0.990 0.661 0.0
>gi|255551471|ref|XP_002516781.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543869|gb|EEF45395.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1028 bits (2658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/646 (74%), Positives = 557/646 (86%), Gaps = 2/646 (0%)

Query: 3   MTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEP 62
           MTI +L+L F+L+CC   SLYHPLDPLNP EINQ  L+VQKS LG L NLTFH +D++EP
Sbjct: 1   MTITMLLLVFILRCCFVASLYHPLDPLNPDEINQVCLVVQKSSLGNLSNLTFHFLDIQEP 60

Query: 63  DKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFA 122
           DK  VL+WLS     K    RQAKVV+RAG ET+ELIVDLA GSI S++++ GHGYPP  
Sbjct: 61  DKADVLKWLSSPNLNKSVPPRQAKVVVRAGGETYELIVDLATGSIISNHVHTGHGYPPLT 120

Query: 123 FIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGS 182
           FIE F+ASKLPL YPKF +SI  RGLN+SEVSC+PFTVGWYGEHVT RAL+V CFYRGGS
Sbjct: 121 FIELFQASKLPLKYPKFIKSIARRGLNISEVSCIPFTVGWYGEHVTKRALRVSCFYRGGS 180

Query: 183 PNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGF 242
            N+FARPIEGIS+LVDVD MQI  Y DR R PLP+AEGTD+  +   P S+I NV+  GF
Sbjct: 181 VNVFARPIEGISILVDVDSMQITAYLDRFRAPLPKAEGTDFRLSG-KPKSIIYNVSDSGF 239

Query: 243 TIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTN 302
           TI GHKVKWANWDFH++FDARAGIVISTASIFD K+ K+R VLY+GH+SETFVPYMDPT+
Sbjct: 240 TINGHKVKWANWDFHLAFDARAGIVISTASIFDAKVKKYRSVLYRGHISETFVPYMDPTS 299

Query: 303 EWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFS 362
           EWYF+TFMD+GEFGFGRAA +LQP+IDCP+NA YLDGYVAGADGQPQ+ S VICIFER+S
Sbjct: 300 EWYFRTFMDVGEFGFGRAAVTLQPLIDCPANAVYLDGYVAGADGQPQKMSNVICIFERYS 359

Query: 363 GNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGI 422
           G+VA+RHTEINVPG VI+SGEPE+SL+VRM+ T+GNYDY+L+WEF KSG+IK+GV+LTGI
Sbjct: 360 GDVAFRHTEINVPGIVIQSGEPEISLMVRMIATLGNYDYILNWEFKKSGSIKVGVSLTGI 419

Query: 423 LEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTAR 482
           LEMKAT YTN+DQIT++VYGTL+ ENAVAVNHDHF+TYYLDLD+DGN NSFVK+K +TAR
Sbjct: 420 LEMKATPYTNSDQITKDVYGTLITENAVAVNHDHFITYYLDLDIDGNDNSFVKAKQQTAR 479

Query: 483 VSNVRAS-PRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITG 541
           V  + A  PRKSYW VV+ETAKTE EARI LG+EP ELL++N N+KT+LGN VGYRLITG
Sbjct: 480 VPAINAHLPRKSYWRVVRETAKTEDEARILLGLEPTELLIMNPNKKTRLGNQVGYRLITG 539

Query: 542 QPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREI 601
           QPV+SLLS DDYPQIR +Y KYQ+WVTAYNKSERWAGGFY D+S GDDGLA+WS RNR I
Sbjct: 540 QPVSSLLSYDDYPQIRTAYLKYQMWVTAYNKSERWAGGFYADRSHGDDGLALWSCRNRVI 599

Query: 602 ENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLL 647
           EN+DIVLWYTVGFHH P QEDFP+M T+H GFELRP+NFFESNPLL
Sbjct: 600 ENRDIVLWYTVGFHHSPCQEDFPVMSTLHDGFELRPTNFFESNPLL 645

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class: N/A

Phylum: Streptophyta

Superkingdom:

>gi|224108051|ref|XP_002314704.1| predicted protein [Populus trichocarpa] gi|222863744|gb|EEF00875.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477345|ref|XP_002278307.2| PREDICTED: primary amine oxidase-like [Vitis vinifera] gi|297737037|emb|CBI26238.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357444251|ref|XP_003592403.1| Primary amine oxidase [Medicago truncatula] gi|355481451|gb|AES62654.1| Primary amine oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356575839|ref|XP_003556044.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356534213|ref|XP_003535652.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|17865165|gb|AAL47166.1|AF449459_1 diamine oxidase [Brassica juncea] Back     alignment and taxonomy information
>gi|449444991|ref|XP_004140257.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|2654118|gb|AAB87690.1| copper amine oxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15233621|ref|NP_193230.1| amine oxidase 1 [Arabidopsis thaliana] gi|2244851|emb|CAB10273.1| amine oxidase like protein [Arabidopsis thaliana] gi|7268240|emb|CAB78536.1| amine oxidase like protein [Arabidopsis thaliana] gi|332658125|gb|AEE83525.1| amine oxidase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query655
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.983 0.990 0.661 7.8e-245
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.952 0.921 0.522 1.6e-182
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.952 0.916 0.503 9e-180
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.923 0.816 0.526 3.5e-178
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.946 0.919 0.510 2.8e-176
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.954 0.843 0.474 1.6e-159
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.945 0.869 0.472 8e-156
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.945 0.901 0.447 8.1e-147
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.926 0.801 0.332 1.7e-84
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.419 0.916 0.514 1.3e-77
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2359 (835.5 bits), Expect = 7.8e-245, P = 7.8e-245
 Identities = 430/650 (66%), Positives = 523/650 (80%)

Query:     3 MTIPLLVLAFLLQCCCANSL-YHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEE 61
             M   +L + FL+QC     L +HPLDPL P EIN+   IV+KS LG L +LTFH +DLEE
Sbjct:     1 MNTSILAILFLIQCVFTLGLHFHPLDPLTPQEINKTSFIVKKSHLGNLKDLTFHYLDLEE 60

Query:    62 PDKVHVLEWLSKQKRGKLNL-HRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPP 120
             P+K HVL+WLS     K     R++ VV+RAG +T+ELI+DL    I S  IY GHG+P 
Sbjct:    61 PNKSHVLQWLSPNPSKKPPPPRRRSFVVVRAGGQTYELIIDLTTSKIASSRIYTGHGFPS 120

Query:   121 FAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRG 180
             F FIE F+ASKLPLTYP F++SI  R LN+SEVSC+PFTVGWYGE  T R LK  CFYR 
Sbjct:   121 FTFIELFKASKLPLTYPPFKKSILDRSLNISEVSCIPFTVGWYGETTTRRELKASCFYRD 180

Query:   181 GSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKG 240
             GS N+F RPIEGI++ +DVD MQ+IKY+DR R P+P  EG D+ + K  P    CNV+  
Sbjct:   181 GSVNVFTRPIEGITVTIDVDSMQVIKYSDRFRKPIPDKEGNDFRT-KHRPFPFFCNVSDT 239

Query:   241 GFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDP 300
             GF I G++VKWANW FHV F ARAG+ ISTAS+ D +  +FRRV+Y+GHVSETFVPYMDP
Sbjct:   240 GFKILGNRVKWANWKFHVGFTARAGVTISTASVLDPRTKRFRRVMYRGHVSETFVPYMDP 299

Query:   301 TNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFER 360
             T EWY++TFMD+GEFGFGR+A +LQP+IDCP NA +LDG+VAG DG  Q+ + V+C+FE+
Sbjct:   300 TYEWYYRTFMDIGEFGFGRSAVNLQPLIDCPQNAAFLDGHVAGPDGTAQKMTNVMCVFEK 359

Query:   361 FSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALT 420
                  ++RHTEINVPG+VI SGE E+SLVVRMV T+GNYDY++DWEF K+G I++GV LT
Sbjct:   360 NGYGASFRHTEINVPGQVITSGEAEISLVVRMVATLGNYDYIVDWEFKKNGAIRVGVDLT 419

Query:   421 GILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKT 480
             G+LE+KATSYT+NDQITENVYGTLVA+N +AVNHDH++TYYLDLDVDGNGNS VK+KLKT
Sbjct:   420 GVLEVKATSYTSNDQITENVYGTLVAKNTIAVNHDHYLTYYLDLDVDGNGNSLVKAKLKT 479

Query:   481 ARVSNVR--ASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRL 538
              RV+ V   +S RKSYWTVVKETAKTEA+ R+RLG +P ELL+VN N+KTK+GN VGYRL
Sbjct:   480 VRVTEVNKTSSRRKSYWTVVKETAKTEADGRVRLGSDPVELLIVNPNKKTKIGNTVGYRL 539

Query:   539 ITGQ-PVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSR 597
             I      TSLL+DDDYP++RA YTKY VWVTAY++SERWAGGFY+D+SRGDDGLAVWSSR
Sbjct:   540 IPEHLQATSLLTDDDYPELRAGYTKYPVWVTAYDRSERWAGGFYSDRSRGDDGLAVWSSR 599

Query:   598 NREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLL 647
             NREIENKDIV+WY VGFHHIPYQEDFP+MPT+HGGF LRPSNFF+++PL+
Sbjct:   600 NREIENKDIVMWYNVGFHHIPYQEDFPVMPTLHGGFTLRPSNFFDNDPLI 649
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=IEA;IDA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0009834 "secondary cell wall biogenesis" evidence=TAS
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49252AMO_LENCU1, ., 4, ., 3, ., 2, 10.50390.94650.9295N/Ano
P80695AMO_KLEOK1, ., 4, ., 3, ., 2, 10.32670.94350.8218yesno
P49250AMO_ENTAE1, ., 4, ., 3, ., 2, 10.32360.94350.8185yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.914
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query655
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 1e-170
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-158
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-141
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-116
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 3e-29
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 7e-25
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score = 1204 bits (3116), Expect = 0.0
 Identities = 511/646 (79%), Positives = 575/646 (89%), Gaps = 2/646 (0%)

Query: 3   MTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEP 62
           M IP+L L F+LQCC   SLYHPLDPLNP EIN+ +LIVQKS LG LPNLTFH +DLEEP
Sbjct: 1   MNIPILALVFILQCCFVASLYHPLDPLNPQEINKIRLIVQKSHLGNLPNLTFHFLDLEEP 60

Query: 63  DKVHVLEWLSKQKRGKLNLHRQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFA 122
           +K  VL+WLS     K    R+AKVV+RAG ET+ELIVDLA GSITS  +Y GHGYPP  
Sbjct: 61  EKRDVLKWLSSNPSNKSPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLT 120

Query: 123 FIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGS 182
           FIE F+ASKLPL YPKF++SI  RGLN+SEVSC+PFTVGWYGE VT RALK+ CFYRGGS
Sbjct: 121 FIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGWYGETVTKRALKISCFYRGGS 180

Query: 183 PNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVTKGGF 242
            N+FARPIEGIS+L+DVD MQIIKY+DR R PLP+AEGTD+ + K  P S  CNV+  GF
Sbjct: 181 VNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRT-KHKPFSFPCNVSDSGF 239

Query: 243 TIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTN 302
           TI GH+VKWANWDFHV FDARAG+ ISTAS+FD K+ +FRRVLY+GHVSETFVPYMDPT+
Sbjct: 240 TILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFVPYMDPTS 299

Query: 303 EWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFS 362
           EWYF+TFMD+GEFGFGR+A +LQP+IDCP+NA YLDGYVAGADGQ Q+ + VICIFER+S
Sbjct: 300 EWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVICIFERYS 359

Query: 363 GNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGI 422
           G+VA+RHTEINVPG+VIRSGEPE+SLVVRMV T+GNYDY+LDWEF KSG+IK+GV LTG+
Sbjct: 360 GDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKSGSIKVGVDLTGV 419

Query: 423 LEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTAR 482
           LEMKATSYTNNDQIT++VYGTLVAEN +AVNHDHF+TYYLDLDVDGNGNSFVK+KL+TAR
Sbjct: 420 LEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVKAKLQTAR 479

Query: 483 VSNVRA-SPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITG 541
           V+ V A SPRKSYWTVVKETAKTEAE RIRLG EPAELL+VN N+KTKLGN VGYRLITG
Sbjct: 480 VTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTKLGNQVGYRLITG 539

Query: 542 QPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREI 601
           QPVTSLLSDDDYPQIRA+YTKYQVWVTAYNKSERWAGGFY D+SRGDDGLAVWSSRNREI
Sbjct: 540 QPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVWSSRNREI 599

Query: 602 ENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLL 647
           ENKDIVLWYTVGFHHIPYQEDFP+MPT+HGGFELRP+NFFESNPLL
Sbjct: 600 ENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLL 645

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 655
PLN02566646 amine oxidase (copper-containing) 100.0
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.89
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.76
>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information 
Probab=100.00  E-value=2.6e-189  Score=1582.44  Aligned_cols=644  Identities=78%  Similarity=1.313  Sum_probs=591.3

Q ss_pred             cchhHHHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCeEEEEEEccCCChHhhHhhHhhccCCCCCCC
Q 006235            3 MTIPLLVLAFLLQCCCANSLYHPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLH   82 (655)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~HPldpLs~~Ei~~a~~~l~~~~~~~~~~~~f~~i~L~EP~K~~vl~~l~~~~~~~~~p~   82 (655)
                      |+.+|+...|.++|+..-...|||||||++||++|++|||++.+.....++|++|+|.||+|++|++|+.+++.+.+.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~HPLdpLs~~Ei~~a~~iv~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~~~~~~p~   80 (646)
T PLN02566          1 MNIPILALVFILQCCFVASLYHPLDPLNPQEINKIRLIVQKSHLGNLPNLTFHFLDLEEPEKRDVLKWLSSNPSNKSPPP   80 (646)
T ss_pred             CCchHHhHhhhhhcceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCceEEEEEEccCCChHHHHhhhhcccCCCCCCC
Confidence            34556655554445554445899999999999999999999875322368999999999999999999998764434578


Q ss_pred             ceeEEEEEeCCeeEEEEEeCCCCcEEEeeeeCCCCCCCCCHHHHHHHhccCCCChHHHHHHHHcCCCCCCeEEccccccc
Q 006235           83 RQAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESIRHRGLNLSEVSCLPFTVGW  162 (655)
Q Consensus        83 R~A~vv~~~~~~~~E~vV~L~~~~v~~~~~~~~~~~p~~~~~E~~~~e~~~~~~p~~~~a~~~~g~~~~~v~~d~w~~G~  162 (655)
                      |+|+|++..+++++|++|||+.++|++++.+++.|||+++.+|+.+||++|++||.|+|+|++|||+.++|+||||++|+
T Consensus        81 R~a~v~~~~~~~~~e~vVdl~~~~v~~~~~~~g~G~p~~~~~e~~~~e~~~~~dp~~~~a~~~rgl~~~~V~~dpw~~G~  160 (646)
T PLN02566         81 RRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLTFIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGW  160 (646)
T ss_pred             cEEEEEEecCCCEEEEEEECCCCEEEEEEEcCCCCcCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCcceEEEeCccccc
Confidence            99997775578899999999999999999998877999999999999999999999999999999988889999999998


Q ss_pred             cCCCCCeeEEEEEEEEecCCCCccccCCCCeEEEEecCCceEEEEeCCccccCCCCCCCCCCCCCCCCCCccCCCC-Cce
Q 006235          163 YGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQIIKYTDRLRLPLPRAEGTDYTSAKTNPDSVICNVT-KGG  241 (655)
Q Consensus       163 ~~~~~~rRl~~~~~~~r~~~~n~Ya~Pl~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~p~~~~~pe-G~s  241 (655)
                      ++..++||++||+||+|++++|+||||||||.++||++++||++|+|.+..++|+..+.+|+.+  .+|+.+.||| |+|
T Consensus       161 ~~~~~~~R~~q~~~y~r~~~~N~Ya~Pl~G~~~vvDl~~~~vi~i~d~~~~p~p~~~~~~~R~d--~kPl~i~QPegG~s  238 (646)
T PLN02566        161 YGETVTKRALKISCFYRGGSVNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRTK--HKPFSFPCNVSDSG  238 (646)
T ss_pred             CCCCCCcEEEEEEEEEcCCCcccccCccCCcEEEEECCCCEEEEEECCCCCccCCCCCCCCCcC--CCCccccCCCCCCc
Confidence            8765679999999999998999999999999999999999999999986667777665556644  3578899999 599


Q ss_pred             EEEeccEEEeeceEEEEEeeCCccceEeeeEEEecCCCceeEEEEeeeeeeEEeecCCCCCcccccceeccCCCCCCccc
Q 006235          242 FTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFGFGRAA  321 (655)
Q Consensus       242 f~v~g~~V~W~~W~f~~~f~~reGlvL~~v~~~D~r~~~~r~I~yrlSl~Em~vpYgdp~~~~~~k~~~D~ge~G~G~~a  321 (655)
                      |+|+|++|+||||+||+|||+|||||||||+|+|++++++|||+||+|||||+||||||+++|++|+|||+||||+|.+|
T Consensus       239 F~v~G~~V~W~~W~f~vgf~~reGlvL~~v~~~D~~~~~~R~v~YrlSlsEm~VPYgDP~~~~~~k~~fD~GeyG~G~~a  318 (646)
T PLN02566        239 FTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFVPYMDPTSEWYFRTFMDIGEFGFGRSA  318 (646)
T ss_pred             EEEcCCEEEecCcEEEEecCCCcceEEEeEEEeccCCCcceeEEEEeeeeeeEEecCCCCccccccceeeccccCccccc
Confidence            99999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCcEEeeeEEeCCCCCeeeecceeEEeeeeCCCceeceeccCCCCeeEeecccceEEEEEEEEEeeccee
Q 006235          322 GSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDY  401 (655)
Q Consensus       322 ~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TV~NYDY  401 (655)
                      |+|++||||||+|+|||+++.+++|+|++++|||||||+|.|||||||++++..+...+.++.+.+||||+|+|||||||
T Consensus       319 ~~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~D~GgilwkHt~~~~~~~~~r~g~~~~~LVvr~I~TVgNYDY  398 (646)
T PLN02566        319 VTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVICIFERYSGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDY  398 (646)
T ss_pred             cccccCCCCCCCcEEeeeEEecCCCCEEEecCEEEEEeecCCccceeeccCCCCccccccCcceEEEEEEEEEEeecccE
Confidence            99999999999999999999999999999999999999998799999999987765566777888999999999999999


Q ss_pred             EEEEEEccCccEEEEEEEeEEEeeeeeccccCCCcccccccceeccCcccccceeeEEeeeecCCCCCCCceEEEEEEEe
Q 006235          402 VLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTA  481 (655)
Q Consensus       402 i~~~~F~~dGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~p~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~  481 (655)
                      ||||+|||||+||+||+|||||+|+++.|...++.+..+|||+|+|+++|++|||+|||||||||||++|||+++|++++
T Consensus       399 if~w~F~qdGtIe~eV~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~  478 (646)
T PLN02566        399 ILDWEFKKSGSIKVGVDLTGVLEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVKAKLQTA  478 (646)
T ss_pred             EEEEEEecCceEEEEEEeEEEEEecccccccccccccCCCccEecCCcccccceEEEEEEEcccccCCCCeEEEEeeEEc
Confidence            99999999999999999999999988876443222236899999999999999999999999999999999999999997


Q ss_pred             eccC-CCCCCcceeEEEEEEEecChHHHhHhcCCCCcEEEEEcCCCCCCCCCceeEEEeeCCCcccCCCCCChhhccccc
Q 006235          482 RVSN-VRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQIRASY  560 (655)
Q Consensus       482 ~~~~-g~~np~~~~~~~~~t~~~tE~~a~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~f  560 (655)
                      +... +++||++++|++++++++||++|++++++..|.|+|+|++++|++|+|+||||+|+++++++++++|+..+||+|
T Consensus       479 ~~~~~~~~np~g~~~~~~~~~~~tE~~a~~~~~~~~~~~~i~N~~~~N~~G~pvgYkL~p~~~~~~l~~~~s~~~~Ra~f  558 (646)
T PLN02566        479 RVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTKLGNQVGYRLITGQPVTSLLSDDDYPQIRAAY  558 (646)
T ss_pred             cCCCCCCCCCCcceEEEEEEEecchhhhhhccCCCCceEEEECCCCcCCCCCeeeEEEccCCCccccCCCccchhhcchh
Confidence            6543 359999999999999999999999999995577999999999999999999999999999999999999999999


Q ss_pred             cccceEEeeeCCCcccCCCcCccCCCCCCChhccccCCcceeeCCeEEEEEeccccCCCCCCCCCccceeeeeEEEeCCC
Q 006235          561 TKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNF  640 (655)
Q Consensus       561 a~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~I~~~DiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nF  640 (655)
                      |+||||||+|+|+|+||||+|++|+++++||++|+++||+|+|||||+|||||+||+||+|||||||++++||+|||+||
T Consensus       559 a~~~lwVT~y~d~E~~aag~y~~qs~g~~gl~~w~~~~~~I~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nF  638 (646)
T PLN02566        559 TKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANF  638 (646)
T ss_pred             hhCcEEEecCCCcccCCCCcCccCCCCCCChhhhhcCCCcccCCceEEEEecccccCCChhhCCCcccccceEEEEcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC
Q 006235          641 FESNPLLL  648 (655)
Q Consensus       641 Fd~nP~ld  648 (655)
                      |++||+|.
T Consensus       639 F~~NPaL~  646 (646)
T PLN02566        639 FESNPLLR  646 (646)
T ss_pred             CCCCCCCC
Confidence            99999983

>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query655
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 0.0
1w2z_A649 Psao And Xenon Length = 649 0.0
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 9e-87
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 6e-86
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 2e-85
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 3e-85
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 3e-85
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 6e-85
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-55
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-54
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 2e-54
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 3e-54
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 3e-54
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 1e-53
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 2e-53
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 2e-53
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 3e-53
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 1e-50
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 1e-50
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 1e-49
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 9e-49
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 8e-48
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 4e-47
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 2e-46
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 2e-46
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 6e-37
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 4e-29
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 1e-27
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 2e-27
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 2e-27
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 3e-25
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 8e-21
1rky_A747 Pplo + Xe Length = 747 1e-20
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure 
Iteration: 1

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/631 (50%), Positives = 435/631 (68%), Gaps = 11/631 (1%)
Query: 24  HPLDPLNPSEINQAKLIVQKSKLGTLPNLTFHSVDLEEPDKVHVLEWLSKQKRGKLNLHR 83
           HPLDPL   E    + IVQ     +   L FH + L++P+K HVL + +      +++ R
Sbjct: 3   HPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTL--VSIPR 60
Query: 84  QAKVVLRAGAETHELIVDLAIGSITSHNIYKGHGYPPFAFIEFFRASKLPLTYPKFRESI 143
           +  VV    ++THE++++L I SI S NI+ G+G+P  +  E   A KLPL YP F +S+
Sbjct: 61  KIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSV 120
Query: 144 RHRGLNLSEVSCLPFTVGWYGEHVTNRALKVVCFYRGGSPNIFARPIEGISMLVDVDKMQ 203
           + RGLNLSE+ C  FT+GW+GE    R +++ CF +  + NI+ RPI GI+++ D+D M+
Sbjct: 121 KKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCFMKESTVNIYVRPITGITIVADLDLMK 180
Query: 204 IIKYTDRLRLPLPRAEGTDYTSAKTNP------DSVICNVTKG-GFTIEGHKVKWANWDF 256
           I++Y DR    +P AE T+Y  +K +P       S+  +  +G GF I GH V WANW F
Sbjct: 181 IVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKF 240
Query: 257 HVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTFMDLGEFG 316
           H+ FD RAGIVIS ASI+D + +K RRVLYKG++SE FVPY DPT E+YFKTF D GEFG
Sbjct: 241 HIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFG 300
Query: 317 FGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPG 376
           FG +  SL P  DCP +A+++D YV  A+G P      IC+FE++ GN+ WRHTE  +P 
Sbjct: 301 FGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPN 359
Query: 377 KVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQI 436
           + I     EV+L+VR + TVGN D V+DWEF  SG+IK  +AL+GILE+K T+  + D+I
Sbjct: 360 ESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEI 419
Query: 437 TENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKTARVSNVRASPRKSYWT 496
            E+++G LV+ N++ + HDHF  YYLD D+DG  NSF K+ LKT R+ +  +S RKSYWT
Sbjct: 420 KEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKD-GSSKRKSYWT 478
Query: 497 VVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLSDDDYPQI 556
              +TAKTE++A+I +G+ PAEL+VVN N KT +GN VGYRLI   P   LL++DDYPQI
Sbjct: 479 TETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQI 538
Query: 557 RASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHH 616
           R ++T Y VWVTAYN++E+WAGG Y D SRGDD LAVW+ +NREI NKDIV+W+ VG HH
Sbjct: 539 RGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHH 598
Query: 617 IPYQEDFPLMPTIHGGFELRPSNFFESNPLL 647
           +P QEDFP+MP +   FELRP+NFFE NP+L
Sbjct: 599 VPAQEDFPIMPLLSTSFELRPTNFFERNPVL 629
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query655
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-175
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-173
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-165
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-164
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-147
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-137
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-135
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-134
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query655
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 655
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-164
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-148
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-147
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-147
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-134
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 2e-40
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 2e-28
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 4e-27
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 3e-26
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 2e-22
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 5e-21
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 2e-20
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 8e-18
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  476 bits (1226), Expect = e-164
 Identities = 237/407 (58%), Positives = 302/407 (74%), Gaps = 2/407 (0%)

Query: 241 GFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDP 300
           GF I GH V WANW FH+ FD RAGIVIS ASI+D + +K RRVLYKG++SE FVPY DP
Sbjct: 24  GFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP 83

Query: 301 TNEWYFKTFMDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFER 360
           T E+YFKTF D GEFGFG +  SL P  DCP +A+++D YV  A+G P      IC+FE+
Sbjct: 84  TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQ 143

Query: 361 FSGNVAWRHTEINVPGKVIRSGEPEVSLVVRMVTTVGNYDYVLDWEFDKSGTIKIGVALT 420
             GN+ WRHTE  +P + I     EV+L+VR + TVGNYD V+DWEF  SG+IK  +AL+
Sbjct: 144 -YGNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALS 202

Query: 421 GILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGNGNSFVKSKLKT 480
           GILE+K T+  + D+I E+++G LV+ N++ + HDHF  YYLD D+DG  NSF K+ LKT
Sbjct: 203 GILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKT 262

Query: 481 ARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLIT 540
            R+ +  +S RKSYWT   +TAKTE++A+I +G+ PAEL+VVN N KT +GN VGYRLI 
Sbjct: 263 VRIKD-GSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIP 321

Query: 541 GQPVTSLLSDDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNRE 600
             P   LL++DDYPQIR ++T Y VWVTAYN++E+WAGG Y D SRGDD LAVW+ +NRE
Sbjct: 322 AIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNRE 381

Query: 601 IENKDIVLWYTVGFHHIPYQEDFPLMPTIHGGFELRPSNFFESNPLL 647
           I NKDIV+W+ VG HH+P QEDFP+MP +   FELRP+NFFE NP+L
Sbjct: 382 IVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVL 428
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query655
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.97
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.94
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.92
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.87
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.86
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.86
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.74
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.12
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 89.98
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=6.6e-142  Score=1162.07  Aligned_cols=424  Identities=56%  Similarity=1.015  Sum_probs=400.6

Q ss_pred             CCCccCCCCCceEEEeccEEEeeceEEEEEeeCCccceEeeeEEEecCCCceeEEEEeeeeeeEEeecCCCCCcccccce
Q 006235          230 PDSVICNVTKGGFTIEGHKVKWANWDFHVSFDARAGIVISTASIFDDKINKFRRVLYKGHVSETFVPYMDPTNEWYFKTF  309 (655)
Q Consensus       230 ~p~~~~~peG~sf~v~g~~V~W~~W~f~~~f~~reGlvL~~v~~~D~r~~~~r~I~yrlSl~Em~vpYgdp~~~~~~k~~  309 (655)
                      +|+.+.||||+||+|+|++|+||+|+||++||+|||||||||+|+|+..+++|||+||+|||||+||||||+++|++|+|
T Consensus        13 kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp~~~~~~k~~   92 (441)
T d1w2za1          13 HSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTF   92 (441)
T ss_dssp             CCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEE
T ss_pred             CCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCCCchhhhcee
Confidence            46788999999999999999999999999999999999999999998667899999999999999999999999999999


Q ss_pred             eccCCCCCCccccCCCCCCCCCCCcEEeeeEEeCCCCCeeeecceeEEeeeeCCCceeceeccCCCCeeEeecccceEEE
Q 006235          310 MDLGEFGFGRAAGSLQPVIDCPSNAEYLDGYVAGADGQPQQFSRVICIFERFSGNVAWRHTEINVPGKVIRSGEPEVSLV  389 (655)
Q Consensus       310 ~D~ge~G~G~~a~~L~~G~DCpg~~~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LV  389 (655)
                      ||+||||+|.+|++|++||||||+|+|||+++.+++|+|++++|||||||+| +|++|||++++.++..++++|++++||
T Consensus        93 ~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~~~r~~~~LV  171 (441)
T d1w2za1          93 FDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLI  171 (441)
T ss_dssp             CHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEEEEEECCEEE
T ss_pred             EcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceEeeecceeEE
Confidence            9999999999999999999999999999999999999999999999999999 779999999998888788888899999


Q ss_pred             EEEEEEeecceeEEEEEEccCccEEEEEEEeEEEeeeeeccccCCCcccccccceeccCcccccceeeEEeeeecCCCCC
Q 006235          390 VRMVTTVGNYDYVLDWEFDKSGTIKIGVALTGILEMKATSYTNNDQITENVYGTLVAENAVAVNHDHFVTYYLDLDVDGN  469 (655)
Q Consensus       390 vr~i~TV~NYDYi~~~~F~~dGtIe~~v~aTGil~t~~~~~~~~~~~~~~~yGt~V~p~~~a~~HqH~f~~RlD~dIdG~  469 (655)
                      ||+|+|||||||||+|+|||||+||+||||||||+++++.....+..++..||++|+|+++|++|||+|||||||||||.
T Consensus       172 vr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~RlD~dIdG~  251 (441)
T d1w2za1         172 VRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGT  251 (441)
T ss_dssp             EEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSS
T ss_pred             EEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEEEEecccCCC
Confidence            99999999999999999999999999999999999877643333333356799999999999999999999999999999


Q ss_pred             CCceEEEEEEEeeccCCCCCCcceeEEEEEEEecChHHHhHhcCCCCcEEEEEcCCCCCCCCCceeEEEeeCCCcccCCC
Q 006235          470 GNSFVKSKLKTARVSNVRASPRKSYWTVVKETAKTEAEARIRLGVEPAELLVVNANQKTKLGNHVGYRLITGQPVTSLLS  549 (655)
Q Consensus       470 ~Nsv~~~d~~~~~~~~g~~np~~~~~~~~~t~~~tE~~a~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~  549 (655)
                      +|||+++|++++++..+ ++|++..++++++++++|++|++.++.++|+|+|+|++++|++|+|+||||+|+++++++++
T Consensus       252 ~Nsv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~~~~~~l~~  330 (441)
T d1w2za1         252 HNSFEKTSLKTVRIKDG-SSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLT  330 (441)
T ss_dssp             CBEEEEEEEEEEECCSS-SCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSC
T ss_pred             CCceEEEEeEeccCCCC-CCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccCCCCcccCC
Confidence            99999999999998542 56666667888899999999988888788999999999999999999999999999999999


Q ss_pred             CCChhhccccccccceEEeeeCCCcccCCCcCccCCCCCCChhccccCCcceeeCCeEEEEEeccccCCCCCCCCCccce
Q 006235          550 DDDYPQIRASYTKYQVWVTAYNKSERWAGGFYTDQSRGDDGLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPLMPTI  629 (655)
Q Consensus       550 ~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~I~~~DiV~W~t~G~~HvPr~ED~Pvmp~~  629 (655)
                      ++|+..+||+||+||||||||+|+|+||+|+|++|+++++||+.|+++||+|+|||||+|+|||+||+||+|||||||++
T Consensus       331 ~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~  410 (441)
T d1w2za1         331 EDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLL  410 (441)
T ss_dssp             TTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGGGSSSCCCE
T ss_pred             CCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCChhhcCCccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEeCCCCCCCCCCCCCCCCCC
Q 006235          630 HGGFELRPSNFFESNPLLLRQENAEK  655 (655)
Q Consensus       630 ~~~f~L~P~nFFd~nP~ldvP~~~~~  655 (655)
                      ++||+|||+|||++||+||+|+++.+
T Consensus       411 ~~gf~L~P~nFF~~nPald~~~~~~~  436 (441)
T d1w2za1         411 STSFELRPTNFFERNPVLKTLSPRDV  436 (441)
T ss_dssp             EEECEEEEESSSSSCTTTTCCCCCCC
T ss_pred             eeeEEEECCCCCCCCCccCCCCcccc
Confidence            99999999999999999999998753
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure