Citrus Sinensis ID: 006251

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650----
MKWMSWEIGSPPVRGPHSPSRFSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLETSLDSWPMSMKS
cccccccccccccccccccccccEEccccEEEEEEEEEEEEEccEEEEHHHHHHHHHHHHHHcHHHHHHHHccccccccccccccccccccccccccccccEEccccccccccHHHHHHHHHcccccccccccccccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccEEEEcccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHcHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHccccccEEEccccHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccccccccEEcccccc
ccEEEEEEcccccccccccccEEEEEccEEEEEEcEEEEEEEcEEEEEccHHHHHEEHcccccccccHHHHcccccccccccccccccccccccccccccEEEEEEEEcccccccccccEEEEEccccccccccccccccccHcccccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEHHHHccccccEEEEEccccccccHHccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHcccccccEEEEEccccccEcccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHcccEEEcccccccHHHHHHHHHHHHHccccccEEEEEEEccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHccccEEEEcccccccccEcccccccEEccccccEEcccccc
mkwmsweigsppvrgphspsrfsyykntslvITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIaigakqsispfftvsqpslsyrkqnfclrasaeknssdgeEATKMVMRKEksgwkidfseekpptplldtinypihmknlsTEDLEQLAAELRADIVNSVsktgghlsanLGVVELTLALHRvfntpddkiiwdvGHQAYVHKILTGRRSRmntmrktsglagfpkreesvhdafgaghsstsiSAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLndnkqvslptatldgpatpvGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGlyyigpvdghnvEDLVTIFQRVkempapgpvLIHVVtekgkgyppaeaaadrmhgvvkfdpktgkqfktksptltYTQYFAESLIKEAETDDKIVAIHAAmgggtglnyfqkrfpdrcfdvgIAEQHAVTFAAGLASEGVKPFCAIYSSFLqrgydqvvhdvdlqklpvrfamdraglvgadgpthcgafdvtfmsclpnmvvmapsdEAELMHMVATAAviddrpscfrfprgngigavlppnnkgtpletsldswpmsmks
mkwmsweigsppvrgphspsRFSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRasaeknssdgeeatKMVMRkeksgwkidfseekpptplldtinYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKIltgrrsrmntmrktsglagfpkrEESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSItkqiggqtheVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKfdpktgkqfktksptltYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNgigavlppnnkgtpletsldswpmsmks
MKWMSWEIGSPPVRGPHSPSRFSYYKNTSLVITQRRHYTIstaslsvsltssFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGalssalsklqasTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLETSLDSWPMSMKS
*********************FSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCL**************************************LLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTG************************************ISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPT***************************************IGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGK*************GVVKF***********SPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVL**********************
****S**IGSPPVRGPHSPSRFSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIA**********************************************************EEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFD*****************QYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLETSLDSWPMSMK*
MKWMSWEIGSPPVRGPHSPSRFSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRA***********ATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLET***********
*KWMSWEIGSPPVRGPHSPSRFSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRASAEKNSSD***ATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGK*****SPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLETSLD********
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKWMSWEIGSPPVRGPHSPSRFSYYKNTSLVITQRRHYTISTASLSVSLTSSFVIHLALTTEYWIAPTMALSSGIAIGAKQSISPFFTVSQPSLSYRKQNFCLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLETSLDSWPMSMKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query654 2.2.26 [Sep-21-2011]
Q6YU51 713 Probable 1-deoxy-D-xylulo yes no 0.870 0.798 0.798 0.0
O22567 720 1-deoxy-D-xylulose-5-phos no no 0.782 0.711 0.781 0.0
Q38854 717 1-deoxy-D-xylulose-5-phos yes no 0.784 0.715 0.760 0.0
O78328 719 Probable 1-deoxy-D-xylulo N/A no 0.781 0.710 0.761 0.0
Q3SUZ1 666 1-deoxy-D-xylulose-5-phos yes no 0.753 0.740 0.611 1e-180
Q89RW1 661 1-deoxy-D-xylulose-5-phos yes no 0.749 0.741 0.614 1e-180
B3QFY7 641 1-deoxy-D-xylulose-5-phos yes no 0.755 0.770 0.613 1e-180
Q6NB76 641 1-deoxy-D-xylulose-5-phos yes no 0.755 0.770 0.613 1e-180
Q130G7 638 1-deoxy-D-xylulose-5-phos yes no 0.749 0.768 0.612 1e-179
Q07SR3 640 1-deoxy-D-xylulose-5-phos yes no 0.755 0.771 0.609 1e-178
>sp|Q6YU51|DXS2_ORYSJ Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2 SV=1 Back     alignment and function desciption
 Score =  965 bits (2494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/571 (79%), Positives = 518/571 (90%), Gaps = 2/571 (0%)

Query: 75  IAIGAKQSISPFFTVSQPSLSYRKQNFCLRASAEKNSSDGEEATKMVMRKEKS--GWKID 132
           +A+ A  S S F  +   + +  ++   +RASA   +++G    K++MRKE +   WKID
Sbjct: 1   MALQASSSPSMFRAIPTNTNASCRRKLQVRASAAAAAANGGGDGKVMMRKEAASGAWKID 60

Query: 133 FSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELT 192
           +S EKP TPLLDT+NYP+HMKNLST +LEQLAAELRA+IV++VSKTGGHLS++LGVVEL 
Sbjct: 61  YSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVELA 120

Query: 193 LALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGA 252
           +ALH VF+TP+DKIIWDVGHQAY HKILTGRRSRM+T+R+TSGLAGFPKR+ES HDAFGA
Sbjct: 121 VALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAFGA 180

Query: 253 GHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLND 312
           GHSSTSISA LGMAVARD+LGK N+VISVIGDGAMTAGQAYEAMNN+G+LD+N+IVVLND
Sbjct: 181 GHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLND 240

Query: 313 NKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVD 372
           NKQVSLPTATLDGPATPVGALS AL+KLQ+ST  R+LREAAK++TKQIGGQ HEVAAKVD
Sbjct: 241 NKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAKVD 300

Query: 373 EYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGK 432
           EYARG++SASGST FEELGLYYIGPVDGH+V+DLV IF +VK MPAPGPVL+H+VTEKGK
Sbjct: 301 EYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGK 360

Query: 433 GYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAM 492
           GYPPAEAAADRMHGVVKFDP TG+QFK+K  TL+YTQYFAE+LI+EAE DDK+V IHAAM
Sbjct: 361 GYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAM 420

Query: 493 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHD 552
           GGGTGLNYF KRFP+RCFDVGIAEQHAVTFAAGLA+EG+KPFCAIYSSFLQRGYDQVVHD
Sbjct: 421 GGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHD 480

Query: 553 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAV 612
           VDLQ+LPVRFAMDRAGLVGADGPTHCGAFDV +M+CLPNMVVMAP+DEAELMHMVATAA 
Sbjct: 481 VDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAA 540

Query: 613 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLET 643
           IDDRPSCFRFPRGNGIGAVLPPN+KGTPLE 
Sbjct: 541 IDDRPSCFRFPRGNGIGAVLPPNHKGTPLEV 571
Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP). Is a limiting enzyme for plastidic isoprenoid biosynthesis and essential for chloroplast development.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 7
>sp|O22567|DXS1_ORYSJ 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2 Back     alignment and function description
>sp|Q38854|DXS_ARATH 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=DXS PE=1 SV=2 Back     alignment and function description
>sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1 Back     alignment and function description
>sp|Q3SUZ1|DXS_NITWN 1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q89RW1|DXS_BRAJA 1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum (strain USDA 110) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|B3QFY7|DXS_RHOPT 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q6NB76|DXS_RHOPA 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q130G7|DXS_RHOPS 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1 Back     alignment and function description
>sp|Q07SR3|DXS_RHOP5 1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query654
94421690711 putative 1-deoxy-D-xylulose 5-phosphate 0.845 0.777 0.879 0.0
255583239714 1-deoxyxylulose-5-phosphate synthase, pu 0.859 0.787 0.865 0.0
164604986711 1-deoxy-D-xylulose 5-phosphate synthase 0.845 0.777 0.878 0.0
11691594716 1-deoxyxylulose 5-phosphate synthase [Ca 0.870 0.794 0.854 0.0
225469658718 PREDICTED: probable 1-deoxy-D-xylulose-5 0.873 0.795 0.844 0.0
408833346713 chloroplast 1-deoxy-D-xylulose-5-phospha 0.863 0.792 0.840 0.0
356523939714 PREDICTED: probable 1-deoxy-D-xylulose-5 0.871 0.798 0.831 0.0
356523941714 PREDICTED: probable 1-deoxy-D-xylulose-5 0.871 0.798 0.829 0.0
449432964721 PREDICTED: probable 1-deoxy-D-xylulose-5 0.859 0.779 0.834 0.0
449532138694 PREDICTED: LOW QUALITY PROTEIN: probable 0.859 0.809 0.833 0.0
>gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis] Back     alignment and taxonomy information
 Score = 1031 bits (2665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/558 (87%), Positives = 526/558 (94%), Gaps = 5/558 (0%)

Query: 85  PFFTVSQPSLSYRKQNFCLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLD 144
           PF    + +L  RKQ FCLRASA     +G    KM++RKEK GWKIDFS EKPPTPLLD
Sbjct: 16  PFLKAPRSNLCGRKQ-FCLRASAGHPDEEG----KMMIRKEKDGWKIDFSGEKPPTPLLD 70

Query: 145 TINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDD 204
           TINYP+H KNLST+DLEQLAAELRADIV SVSKTGGHLS++LGVVEL +ALH VF+TPDD
Sbjct: 71  TINYPVHTKNLSTQDLEQLAAELRADIVYSVSKTGGHLSSSLGVVELAVALHHVFSTPDD 130

Query: 205 KIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLG 264
           KIIWDVGHQAY HKILTGRRSRM+T+RKTSGLAGFPKR+ESV+DAFGAGHSSTSISAGLG
Sbjct: 131 KIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLG 190

Query: 265 MAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLD 324
           MAVARD+LGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIV+LNDNKQVSLPTATLD
Sbjct: 191 MAVARDLLGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTATLD 250

Query: 325 GPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGS 384
           GPATPVGALSSAL+K+QAST FRKLREAAKSITKQIGG+TH+VAAKVDEYARG+ISASGS
Sbjct: 251 GPATPVGALSSALAKIQASTQFRKLREAAKSITKQIGGKTHQVAAKVDEYARGMISASGS 310

Query: 385 TFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRM 444
           T FEELGLYYIGPVDGHN+EDLVTIFQ+VK MPAPGPVLIH+VTEKGKGYPPAEAAAD+M
Sbjct: 311 TLFEELGLYYIGPVDGHNIEDLVTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKM 370

Query: 445 HGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKR 504
           HGVVKFD +TGKQFK KSPTL+YTQYFAE+LIKEAETD+KIVAIHAAMGGGTGLNYFQKR
Sbjct: 371 HGVVKFDVQTGKQFKPKSPTLSYTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKR 430

Query: 505 FPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAM 564
           FPDRCFDVGIAEQHAVTFAAGLA+EG+KPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAM
Sbjct: 431 FPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAM 490

Query: 565 DRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPR 624
           DRAGLVGADGPTHCGAFD+ +M+CLPNMVVMAPSDEAELMHMVATAA IDDRPSCFRFPR
Sbjct: 491 DRAGLVGADGPTHCGAFDIAYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPR 550

Query: 625 GNGIGAVLPPNNKGTPLE 642
           GNGIGA LPPNNKGTPLE
Sbjct: 551 GNGIGAALPPNNKGTPLE 568

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255583239|ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|164604986|dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus] Back     alignment and taxonomy information
>gi|225469658|ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Vitis vinifera] gi|296090521|emb|CBI40852.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|408833346|gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia ulmoides] Back     alignment and taxonomy information
>gi|356523939|ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356523941|ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|449432964|ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449532138|ref|XP_004173040.1| PREDICTED: LOW QUALITY PROTEIN: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query654
TAIR|locus:2130374 717 CLA1 "CLOROPLASTOS ALTERADOS 1 0.818 0.746 0.713 8.7e-214
TAIR|locus:2089885641 DXPS1 "1-deoxy-D-xylulose 5-ph 0.437 0.446 0.707 5.6e-191
TIGR_CMR|SPO_0247 642 SPO_0247 "1-deoxy-D-xylulose-5 0.749 0.763 0.563 4.6e-144
TAIR|locus:2148047 700 DXPS3 "1-deoxy-D-xylulose 5-ph 0.449 0.42 0.498 2e-130
TIGR_CMR|GSU_0686 637 GSU_0686 "deoxyxylulose-5-phos 0.746 0.766 0.508 9.6e-128
TIGR_CMR|GSU_1764 626 GSU_1764 "deoxyxylulose-5-phos 0.747 0.781 0.505 3.3e-127
TIGR_CMR|CPS_1088 630 CPS_1088 "1-deoxy-D-xylulose-5 0.730 0.758 0.496 1e-123
UNIPROTKB|P77488 620 dxs "Dxs" [Escherichia coli K- 0.738 0.779 0.478 9.4e-122
TIGR_CMR|CHY_1985 622 CHY_1985 "1-deoxy-D-xylulose-5 0.744 0.782 0.479 7.4e-121
TIGR_CMR|DET_0745 647 DET_0745 "1-deoxy-D-xylulose-5 0.758 0.766 0.476 3.3e-118
TAIR|locus:2130374 CLA1 "CLOROPLASTOS ALTERADOS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2066 (732.3 bits), Expect = 8.7e-214, P = 8.7e-214
 Identities = 386/541 (71%), Positives = 449/541 (82%)

Query:   102 CLRASAEKNSSDGEEATKMVMRKEKSGWKIDFSEEKPPTPLLDTINYPIHMKNLSTEDLE 161
             CL+ +   N+S      K+     + G   ++   +PPTPLLDTINYPIHMKNLS ++L+
Sbjct:    42 CLKPN---NNSHSNRRAKVCASLAEKG---EYYSNRPPTPLLDTINYPIHMKNLSVKELK 95

Query:   162 QLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKILT 221
             QL+ ELR+D++ +VSKTGGHL ++LGVVELT+ALH +FNTP DKI+WDVGHQ+Y HKILT
Sbjct:    96 QLSDELRSDVIFNVSKTGGHLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILT 155

Query:   222 GRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISV 281
             GRR +M TMR+T+GL+GF KR ES HD FG GHSST+ISAGLGMAV RD+ GKNNNV++V
Sbjct:   156 GRRGKMPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAV 215

Query:   282 IGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGXXXXXXXXXX 341
             IGDGAMTAGQAYEAMNNAG+LD+++IV+LNDNKQVSLPTATLDGP+ PVG          
Sbjct:   216 IGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQ 275

Query:   342 XXTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGH 401
                  R+LRE AK +TKQIGG  H++AAKVDEYARG+IS +GS+ FEELGLYYIGPVDGH
Sbjct:   276 SNPALRELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGH 335

Query:   402 NVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTK 461
             N++DLV I + VK     GPVLIHVVTEKG+GYP AE A D+ HGVVKFDP TG+QFKT 
Sbjct:   336 NIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTT 395

Query:   462 SPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVT 521
             + T +YT YFAE+L+ EAE D  +VAIHAAMGGGTGLN FQ+RFP RCFDVGIAEQHAVT
Sbjct:   396 NKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVT 455

Query:   522 FAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAF 581
             FAAGLA EG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAF
Sbjct:   456 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAF 515

Query:   582 DVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPL 641
             DVTFM+CLPNM+VMAPSDEA+L +MVATA  IDDRPSCFR+PRGNGIG  LPP NKG P+
Sbjct:   516 DVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPI 575

Query:   642 E 642
             E
Sbjct:   576 E 576
GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008661 "1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=IEA;IDA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016114 "terpenoid biosynthetic process" evidence=IEA
GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor" evidence=IEA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA;IMP
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA;TAS
GO:0000096 "sulfur amino acid metabolic process" evidence=RCA
GO:0006546 "glycine catabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA
GO:0006766 "vitamin metabolic process" evidence=RCA
GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA
GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA
GO:0009106 "lipoate metabolic process" evidence=RCA
GO:0009108 "coenzyme biosynthetic process" evidence=RCA
GO:0009117 "nucleotide metabolic process" evidence=RCA
GO:0009416 "response to light stimulus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009965 "leaf morphogenesis" evidence=RCA
GO:0010155 "regulation of proton transport" evidence=RCA
GO:0015994 "chlorophyll metabolic process" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0019216 "regulation of lipid metabolic process" evidence=RCA
GO:0019344 "cysteine biosynthetic process" evidence=RCA
GO:0019748 "secondary metabolic process" evidence=RCA
GO:0030154 "cell differentiation" evidence=RCA
GO:0031408 "oxylipin biosynthetic process" evidence=RCA
GO:0032880 "regulation of protein localization" evidence=RCA
GO:0044272 "sulfur compound biosynthetic process" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
GO:0046777 "protein autophosphorylation" evidence=RCA
TAIR|locus:2089885 DXPS1 "1-deoxy-D-xylulose 5-phosphate synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0247 SPO_0247 "1-deoxy-D-xylulose-5-phosphate synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TAIR|locus:2148047 DXPS3 "1-deoxy-D-xylulose 5-phosphate synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0686 GSU_0686 "deoxyxylulose-5-phosphate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1764 GSU_1764 "deoxyxylulose-5-phosphate synthase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_1088 CPS_1088 "1-deoxy-D-xylulose-5-phosphate synthase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|P77488 dxs "Dxs" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1985 CHY_1985 "1-deoxy-D-xylulose-5-phosphate synthase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0745 DET_0745 "1-deoxy-D-xylulose-5-phosphate synthase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A9IQP2DXS_BART12, ., 2, ., 1, ., 70.58920.74770.7700yesno
A5V6A9DXS_SPHWW2, ., 2, ., 1, ., 70.60040.74310.7605yesno
A5VP09DXS_BRUO22, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q6G0D4DXS_BARQU2, ., 2, ., 1, ., 70.59720.74770.7640yesno
B0CKC0DXS_BRUSI2, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q57ET1DXS_BRUAB2, ., 2, ., 1, ., 70.61060.75220.7651yesno
B8GXC4DXS_CAUCN2, ., 2, ., 1, ., 70.59240.74770.7640yesno
Q8UHD7DXS_AGRT52, ., 2, ., 1, ., 70.5720.74610.7636yesno
A9M8W0DXS_BRUC22, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q11KE0DXS_MESSB2, ., 2, ., 1, ., 70.60080.74000.7446yesno
Q5FUB1DXS_GLUOX2, ., 2, ., 1, ., 70.58900.74770.7409yesno
Q2RYD6DXS1_RHORT2, ., 2, ., 1, ., 70.57910.74770.7581yesno
Q8G292DXS_BRUSU2, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q2KBR2DXS_RHIEC2, ., 2, ., 1, ., 70.5720.74610.7648yesno
A1URW6DXS_BARBK2, ., 2, ., 1, ., 70.59760.75220.7711yesno
B2IDK3DXS_BEII92, ., 2, ., 1, ., 70.60320.73850.7523yesno
Q21A74DXS_RHOPB2, ., 2, ., 1, ., 70.61440.74460.7597yesno
Q6YU51DXS2_ORYSJ2, ., 2, ., 1, ., 70.79850.87000.7980yesno
Q1QQ40DXS_NITHX2, ., 2, ., 1, ., 70.60070.75840.7425yesno
Q92RJ1DXS_RHIME2, ., 2, ., 1, ., 70.5880.74610.7565yesno
A8IBS1DXS_AZOC52, ., 2, ., 1, ., 70.60150.74920.7644yesno
A5EEQ0DXS_BRASB2, ., 2, ., 1, ., 70.60550.74770.7628yesno
B9JSL2DXS_AGRVS2, ., 2, ., 1, ., 70.57020.75380.7715yesno
Q2GC13DXS_NOVAD2, ., 2, ., 1, ., 70.58030.74310.7593yesno
B2S9T6DXS_BRUA12, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q2IRL7DXS_RHOP22, ., 2, ., 1, ., 70.60630.74920.7680yesno
Q2RR29DXS2_RHORT2, ., 2, ., 1, ., 70.57910.74770.7581yesno
Q0ARE5DXS_MARMM2, ., 2, ., 1, ., 70.58210.74770.7604yesno
Q07SR3DXS_RHOP52, ., 2, ., 1, ., 70.60940.75530.7718yesno
Q985Y3DXS_RHILO2, ., 2, ., 1, ., 70.60990.75070.7708yesno
B4RGW0DXS_PHEZH2, ., 2, ., 1, ., 70.58260.74000.7586yesno
Q9A6M5DXS_CAUCR2, ., 2, ., 1, ., 70.59240.74770.7640yesno
A4YQ36DXS_BRASO2, ., 2, ., 1, ., 70.60150.75070.7659yesno
Q2YMF0DXS_BRUA22, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q2W367DXS_MAGSA2, ., 2, ., 1, ., 70.60.75680.7686yesno
Q8YFM2DXS_BRUME2, ., 2, ., 1, ., 70.61060.75220.7651yesno
A7IPK6DXS_XANP22, ., 2, ., 1, ., 70.59960.74920.7620yesno
B3QFY7DXS_RHOPT2, ., 2, ., 1, ., 70.61340.75530.7706yesno
O78328DXS_CAPAN2, ., 2, ., 1, ., 70.76120.78130.7107N/Ano
B6IRB5DXS_RHOCS2, ., 2, ., 1, ., 70.59040.74920.7632yesno
Q6NB76DXS_RHOPA2, ., 2, ., 1, ., 70.61340.75530.7706yesno
Q3SUZ1DXS_NITWN2, ., 2, ., 1, ., 70.61170.75380.7402yesno
Q130G7DXS_RHOPS2, ., 2, ., 1, ., 70.61230.74920.7680yesno
B0T3X7DXS_CAUSK2, ., 2, ., 1, ., 70.58840.74770.7664yesno
C0RHE3DXS_BRUMB2, ., 2, ., 1, ., 70.61060.75220.7651yesno
Q6G4D1DXS_BARHE2, ., 2, ., 1, ., 70.59520.74770.7640yesno
A6WWC4DXS_OCHA42, ., 2, ., 1, ., 70.61850.75220.7711yesno
Q89RW1DXS_BRAJA2, ., 2, ., 1, ., 70.61430.74920.7413yesno
Q38854DXS_ARATH2, ., 2, ., 1, ., 70.76020.78440.7154yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.2.10.921
4th Layer2.2.1.70.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
PLN02582 677 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate 0.0
PRK05444 580 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate 0.0
COG1154 627 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [ 0.0
PLN02234641 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate 0.0
PRK12571 641 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate 0.0
TIGR00204 617 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate syn 0.0
PLN02225 701 PLN02225, PLN02225, 1-deoxy-D-xylulose-5-phosphate 1e-179
pfam13292272 pfam13292, DXP_synthase_N, 1-deoxy-D-xylulose-5-ph 1e-163
PRK12315 581 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate 1e-140
cd02007195 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam 1e-118
cd07033156 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) bin 1e-69
pfam02779172 pfam02779, Transket_pyr, Transketolase, pyrimidine 1e-52
smart00861136 smart00861, Transket_pyr, Transketolase, pyrimidin 3e-44
COG3958 312 COG3958, COG3958, Transketolase, C-terminal subuni 3e-33
PRK05899 586 PRK05899, PRK05899, transketolase; Reviewed 4e-18
cd06586154 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding 2e-17
cd02012255 cd02012, TPP_TK, Thiamine pyrophosphate (TPP) fami 6e-15
cd07036167 cd07036, TPP_PYR_E1-PDHc-beta_like, Pyrimidine (PY 1e-10
COG3959243 COG3959, COG3959, Transketolase, N-terminal subuni 2e-09
cd02000293 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph 3e-07
TIGR03181341 TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E 9e-07
cd00568168 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) 1e-06
PTZ00182 355 PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydro 5e-06
COG0021 663 COG0021, TktA, Transketolase [Carbohydrate transpo 9e-06
COG1071358 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogena 2e-05
pfam00676303 pfam00676, E1_dh, Dehydrogenase E1 component 4e-05
PLN02269362 PLN02269, PLN02269, Pyruvate dehydrogenase E1 comp 4e-04
PLN02790 654 PLN02790, PLN02790, transketolase 0.002
COG0022 324 COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogena 0.002
>gnl|CDD|178194 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information 
 Score =  949 bits (2454), Expect = 0.0
 Identities = 402/511 (78%), Positives = 454/511 (88%)

Query: 132 DFSEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVEL 191
           ++  ++PPTPLLDTINYPIHMKNLS ++L+QLA ELR+D++ +VSKTGGHL ++LGVVEL
Sbjct: 23  EYPSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVIFNVSKTGGHLGSSLGVVEL 82

Query: 192 TLALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFG 251
           T+ALH VFN P DKI+WDVGHQ+Y HKILTGRR +M+TMR+T+GL+GF KR ES +D FG
Sbjct: 83  TVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRAESEYDCFG 142

Query: 252 AGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLN 311
            GHSST+ISAGLGMAV RD+ GK NNV++VIGDGAMTAGQAYEAMNNAG+LD+++IV+LN
Sbjct: 143 TGHSSTTISAGLGMAVGRDLKGKKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILN 202

Query: 312 DNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKV 371
           DNKQVSLPTATLDGPA PVGALSSALS+LQ+S   R+LRE AK +TKQIGG  HE+AAKV
Sbjct: 203 DNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPLRELREVAKGVTKQIGGPMHELAAKV 262

Query: 372 DEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKG 431
           DEYARG+IS SGST FEELGLYYIGPVDGHN++DLVTI + VK     GPVLIHVVTEKG
Sbjct: 263 DEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVTILREVKSTKTTGPVLIHVVTEKG 322

Query: 432 KGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAA 491
           +GYP AE AAD+ HGVVKFDP TGKQFK K+ T +YT YFAE+LI EAE D  +VAIHAA
Sbjct: 323 RGYPYAERAADKYHGVVKFDPATGKQFKVKAKTQSYTTYFAEALIAEAEVDKDVVAIHAA 382

Query: 492 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVH 551
           MGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EG+KPFCAIYSSFLQRGYDQVVH
Sbjct: 383 MGGGTGLNLFARRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVH 442

Query: 552 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAA 611
           DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVT+M+CLPNMVVMAPSDEAEL HMVATAA
Sbjct: 443 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAA 502

Query: 612 VIDDRPSCFRFPRGNGIGAVLPPNNKGTPLE 642
            IDDRPSCFR+PRGNGIG  LPPNNKG P+E
Sbjct: 503 AIDDRPSCFRYPRGNGIGVQLPPNNKGIPIE 533

Length = 677
>gnl|CDD|235470 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|224076 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information
>gnl|CDD|177878 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|183601 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|129308 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|177870 PLN02225, PLN02225, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|222031 pfam13292, DXP_synthase_N, 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>gnl|CDD|237053 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>gnl|CDD|132916 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>gnl|CDD|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain Back     alignment and domain information
>gnl|CDD|226467 COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235639 PRK05899, PRK05899, transketolase; Reviewed Back     alignment and domain information
>gnl|CDD|132915 cd06586, TPP_enzyme_PYR, Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>gnl|CDD|238970 cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>gnl|CDD|132919 cd07036, TPP_PYR_E1-PDHc-beta_like, Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>gnl|CDD|226468 COG3959, COG3959, Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>gnl|CDD|213783 TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>gnl|CDD|238318 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>gnl|CDD|185502 PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|223100 COG0021, TktA, Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|223997 COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|201386 pfam00676, E1_dh, Dehydrogenase E1 component Back     alignment and domain information
>gnl|CDD|215152 PLN02269, PLN02269, Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>gnl|CDD|215424 PLN02790, PLN02790, transketolase Back     alignment and domain information
>gnl|CDD|223101 COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 654
COG1154 627 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m 100.0
PLN02225 701 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02234641 1-deoxy-D-xylulose-5-phosphate synthase 100.0
PLN02582 677 1-deoxy-D-xylulose-5-phosphate synthase 100.0
TIGR00204 617 dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s 100.0
PRK12571 641 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK12315 581 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK05444 580 1-deoxy-D-xylulose-5-phosphate synthase; Provision 100.0
PRK12753 663 transketolase; Reviewed 100.0
PTZ00089 661 transketolase; Provisional 100.0
KOG0523 632 consensus Transketolase [Carbohydrate transport an 100.0
PLN02790 654 transketolase 100.0
PRK12754 663 transketolase; Reviewed 100.0
PRK05899 624 transketolase; Reviewed 100.0
TIGR00232 653 tktlase_bact transketolase, bacterial and yeast. T 100.0
COG0021 663 TktA Transketolase [Carbohydrate transport and met 100.0
PF13292270 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn 100.0
TIGR03186 889 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S 100.0
PRK13012 896 2-oxoacid dehydrogenase subunit E1; Provisional 100.0
PRK09405 891 aceE pyruvate dehydrogenase subunit E1; Reviewed 100.0
TIGR00759 885 aceE pyruvate dehydrogenase E1 component, homodime 100.0
COG3959243 Transketolase, N-terminal subunit [Carbohydrate tr 100.0
PRK05261 785 putative phosphoketolase; Provisional 100.0
cd02007195 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s 100.0
PF00456332 Transketolase_N: Transketolase, thiamine diphospha 100.0
COG3958 312 Transketolase, C-terminal subunit [Carbohydrate tr 100.0
cd02017386 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam 100.0
cd02012255 TPP_TK Thiamine pyrophosphate (TPP) family, Transk 100.0
cd07033156 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai 100.0
PRK09404 924 sucA 2-oxoglutarate dehydrogenase E1 component; Re 100.0
PRK09212 327 pyruvate dehydrogenase subunit beta; Validated 100.0
CHL00144 327 odpB pyruvate dehydrogenase E1 component beta subu 100.0
PLN02683 356 pyruvate dehydrogenase E1 component subunit beta 100.0
COG2609 887 AceE Pyruvate dehydrogenase complex, dehydrogenase 100.0
PTZ00182 355 3-methyl-2-oxobutanate dehydrogenase; Provisional 100.0
PRK11892 464 pyruvate dehydrogenase subunit beta; Provisional 100.0
TIGR00239 929 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon 100.0
cd07036167 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding 100.0
COG0022 324 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex 100.0
PF02779178 Transket_pyr: Transketolase, pyrimidine binding do 100.0
smart00861168 Transket_pyr Transketolase, pyrimidine binding dom 99.97
KOG0524 359 consensus Pyruvate dehydrogenase E1, beta subunit 99.94
COG1071358 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex 99.93
CHL00149341 odpA pyruvate dehydrogenase E1 component alpha sub 99.92
PLN02269362 Pyruvate dehydrogenase E1 component subunit alpha 99.92
KOG0525 362 consensus Branched chain alpha-keto acid dehydroge 99.91
cd02000293 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) 99.9
PLN02374433 pyruvate dehydrogenase (acetyl-transferring) 99.9
PF00676300 E1_dh: Dehydrogenase E1 component; InterPro: IPR00 99.89
TIGR03182315 PDH_E1_alph_y pyruvate dehydrogenase E1 component, 99.89
COG3957 793 Phosphoketolase [Carbohydrate transport and metabo 99.89
TIGR03181341 PDH_E1_alph_x pyruvate dehydrogenase E1 component, 99.88
KOG0225394 consensus Pyruvate dehydrogenase E1, alpha subunit 99.84
cd02011227 TPP_PK Thiamine pyrophosphate (TPP) family, Phosph 99.81
cd02016265 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami 99.75
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 99.6
KOG1182432 consensus Branched chain alpha-keto acid dehydroge 99.53
cd03371188 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp 99.51
PF09364379 XFP_N: XFP N-terminal domain; InterPro: IPR018970 99.51
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 99.45
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 99.45
PRK06163202 hypothetical protein; Provisional 99.44
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 99.41
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 99.4
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 99.39
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 99.38
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 99.38
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 99.37
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 99.37
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 99.36
PF02775153 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter 99.34
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 99.32
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 99.32
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 99.32
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 99.3
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 99.29
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 99.27
PRK12270 1228 kgd alpha-ketoglutarate decarboxylase; Reviewed 99.27
cd03375193 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o 99.24
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 99.24
cd02005183 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, 99.23
PRK06546578 pyruvate dehydrogenase; Provisional 99.2
PRK08266542 hypothetical protein; Provisional 99.16
PRK09124574 pyruvate dehydrogenase; Provisional 99.16
COG0028550 IlvB Thiamine pyrophosphate-requiring enzymes [ace 99.15
PRK07524535 hypothetical protein; Provisional 99.15
PRK06112578 acetolactate synthase catalytic subunit; Validated 99.15
PRK08199557 thiamine pyrophosphate protein; Validated 99.14
TIGR02418539 acolac_catab acetolactate synthase, catabolic. Ace 99.13
PRK06457549 pyruvate dehydrogenase; Provisional 99.13
PRK08611576 pyruvate oxidase; Provisional 99.12
PRK07064544 hypothetical protein; Provisional 99.11
PRK06154565 hypothetical protein; Provisional 99.11
PRK12474518 hypothetical protein; Provisional 99.1
PRK05858542 hypothetical protein; Provisional 99.1
PRK06965587 acetolactate synthase 3 catalytic subunit; Validat 99.09
PRK09107595 acetolactate synthase 3 catalytic subunit; Validat 99.09
PRK08322547 acetolactate synthase; Reviewed 99.09
TIGR01504588 glyox_carbo_lig glyoxylate carboligase. Glyoxylate 99.09
PRK06725570 acetolactate synthase 3 catalytic subunit; Validat 99.09
PRK08978548 acetolactate synthase 2 catalytic subunit; Reviewe 99.08
PRK08273597 thiamine pyrophosphate protein; Provisional 99.08
PRK07418616 acetolactate synthase 3 catalytic subunit; Reviewe 99.07
PLN02470585 acetolactate synthase 99.06
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 99.06
PRK07586514 hypothetical protein; Validated 99.06
PRK08617552 acetolactate synthase; Reviewed 99.06
PRK06456572 acetolactate synthase catalytic subunit; Reviewed 99.06
CHL00099585 ilvB acetohydroxyacid synthase large subunit 99.06
PRK08979572 acetolactate synthase 3 catalytic subunit; Validat 99.06
TIGR02720575 pyruv_oxi_spxB pyruvate oxidase. Members of this f 99.05
PRK06048561 acetolactate synthase 3 catalytic subunit; Reviewe 99.05
TIGR03457579 sulphoacet_xsc sulfoacetaldehyde acetyltransferase 99.05
PRK08527563 acetolactate synthase 3 catalytic subunit; Validat 99.05
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.04
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 99.04
PRK07979574 acetolactate synthase 3 catalytic subunit; Validat 99.04
PRK07710571 acetolactate synthase catalytic subunit; Reviewed 99.04
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 99.03
PRK07092530 benzoylformate decarboxylase; Reviewed 99.03
PRK06466574 acetolactate synthase 3 catalytic subunit; Validat 99.03
PRK11269591 glyoxylate carboligase; Provisional 99.03
TIGR03393539 indolpyr_decarb indolepyruvate decarboxylase, Erwi 99.03
PRK08155564 acetolactate synthase catalytic subunit; Validated 99.02
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 99.02
PRK09259569 putative oxalyl-CoA decarboxylase; Validated 99.02
TIGR00118558 acolac_lg acetolactate synthase, large subunit, bi 99.01
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 99.0
PLN02573578 pyruvate decarboxylase 99.0
PRK07789612 acetolactate synthase 1 catalytic subunit; Validat 99.0
TIGR03254554 oxalate_oxc oxalyl-CoA decarboxylase. In a number 98.99
PRK07525588 sulfoacetaldehyde acetyltransferase; Validated 98.98
PRK06276586 acetolactate synthase catalytic subunit; Reviewed 98.98
PRK08327569 acetolactate synthase catalytic subunit; Validated 98.97
PRK07282566 acetolactate synthase catalytic subunit; Reviewed 98.97
TIGR03394535 indol_phenyl_DC indolepyruvate/phenylpyruvate deca 98.96
PRK07449568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 98.94
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 98.92
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 98.91
PF03894179 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate 98.88
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 98.85
TIGR03336595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 98.81
PLN02980 1655 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi 98.6
COG3961557 Pyruvate decarboxylase and related thiamine pyroph 98.55
COG3962617 Acetolactate synthase [Amino acid transport and me 98.49
KOG4166675 consensus Thiamine pyrophosphate-requiring enzyme 98.22
KOG1185571 consensus Thiamine pyrophosphate-requiring enzyme 98.14
KOG0451 913 consensus Predicted 2-oxoglutarate dehydrogenase, 98.03
KOG1184561 consensus Thiamine pyrophosphate-requiring enzyme 97.95
COG1013294 PorB Pyruvate:ferredoxin oxidoreductase and relate 97.9
COG0567 906 SucA 2-oxoglutarate dehydrogenase complex, dehydro 97.86
COG4231640 Indolepyruvate ferredoxin oxidoreductase, alpha an 97.8
cd03377365 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), 97.51
TIGR03297361 Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi 97.32
KOG0523 632 consensus Transketolase [Carbohydrate transport an 97.29
KOG0450 1017 consensus 2-oxoglutarate dehydrogenase, E1 subunit 97.09
COG1165566 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car 96.97
COG3960592 Glyoxylate carboligase [General function predictio 96.77
PRK13030 1159 2-oxoacid ferredoxin oxidoreductase; Provisional 96.6
PRK07119 352 2-ketoisovalerate ferredoxin reductase; Validated 96.57
cd07034160 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi 96.5
PRK09193 1165 indolepyruvate ferredoxin oxidoreductase; Validate 96.47
PF01855230 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta 96.18
cd07035155 TPP_PYR_POX_like Pyrimidine (PYR) binding domain o 96.1
TIGR021761165 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid 96.05
PRK08659 376 2-oxoglutarate ferredoxin oxidoreductase subunit a 96.03
PRK13029 1186 2-oxoacid ferredoxin oxidoreductase; Provisional 96.02
PRK09627 375 oorA 2-oxoglutarate-acceptor oxidoreductase subuni 95.39
PRK08366 390 vorA 2-ketoisovalerate ferredoxin oxidoreductase s 95.19
TIGR03710 562 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s 94.91
PRK09622 407 porA pyruvate flavodoxin oxidoreductase subunit al 94.53
PF02776172 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter 94.46
TIGR03845157 sulfopyru_alph sulfopyruvate decarboxylase, alpha 93.43
TIGR03336 595 IOR_alpha indolepyruvate ferredoxin oxidoreductase 93.12
PRK08367 394 porA pyruvate ferredoxin oxidoreductase subunit al 93.11
cd07037162 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2- 92.91
cd02004172 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam 92.65
cd02001157 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil 92.09
cd02014178 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv 91.85
cd02018237 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru 91.27
PRK11866279 2-oxoacid ferredoxin oxidoreductase subunit beta; 91.26
cd07039164 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX 91.2
TIGR02177287 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta 90.66
cd02015186 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet 90.54
PRK11864300 2-ketoisovalerate ferredoxin oxidoreductase subuni 90.46
cd03376235 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam 90.46
PRK11865299 pyruvate ferredoxin oxidoreductase subunit beta; P 89.99
cd01460266 vWA_midasin VWA_Midasin: Midasin is a member of th 89.74
cd02010177 TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto 89.38
PRK07979 574 acetolactate synthase 3 catalytic subunit; Validat 89.28
cd02009175 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa 88.95
COG4231 640 Indolepyruvate ferredoxin oxidoreductase, alpha an 88.89
PRK11867286 2-oxoglutarate ferredoxin oxidoreductase subunit b 88.34
cd03372179 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE 87.8
TIGR00118 558 acolac_lg acetolactate synthase, large subunit, bi 87.3
PRK07064 544 hypothetical protein; Provisional 87.13
TIGR02418 539 acolac_catab acetolactate synthase, catabolic. Ace 86.86
PRK06965 587 acetolactate synthase 3 catalytic subunit; Validat 86.81
PRK05778301 2-oxoglutarate ferredoxin oxidoreductase subunit b 86.06
cd06586154 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of 85.77
PRK06466 574 acetolactate synthase 3 catalytic subunit; Validat 85.31
PRK07525 588 sulfoacetaldehyde acetyltransferase; Validated 85.17
TIGR03846181 sulfopy_beta sulfopyruvate decarboxylase, beta sub 85.14
cd02013196 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, 85.13
PRK07524 535 hypothetical protein; Provisional 85.04
cd02006202 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s 85.02
PRK08199 557 thiamine pyrophosphate protein; Validated 84.84
PRK07092 530 benzoylformate decarboxylase; Reviewed 84.5
PRK06882574 acetolactate synthase 3 catalytic subunit; Validat 84.4
PRK11869280 2-oxoacid ferredoxin oxidoreductase subunit beta; 84.28
PRK07282 566 acetolactate synthase catalytic subunit; Reviewed 84.18
cd02002178 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC 83.92
PRK08322 547 acetolactate synthase; Reviewed 83.81
PRK07586 514 hypothetical protein; Validated 83.76
PRK08155 564 acetolactate synthase catalytic subunit; Validated 83.68
PRK09628277 oorB 2-oxoglutarate-acceptor oxidoreductase subuni 83.46
cd02003205 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD 83.43
PRK05858 542 hypothetical protein; Provisional 83.39
PRK08527 563 acetolactate synthase 3 catalytic subunit; Validat 83.14
PRK07710 571 acetolactate synthase catalytic subunit; Reviewed 83.1
PRK09107 595 acetolactate synthase 3 catalytic subunit; Validat 82.93
PRK07789 612 acetolactate synthase 1 catalytic subunit; Validat 82.42
cd00568168 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa 82.1
PRK07449 568 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 81.91
PRK06112 578 acetolactate synthase catalytic subunit; Validated 81.77
PRK06163202 hypothetical protein; Provisional 81.64
PRK06276 586 acetolactate synthase catalytic subunit; Reviewed 81.6
PRK08978 548 acetolactate synthase 2 catalytic subunit; Reviewe 81.37
cd02008178 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, 80.57
PRK06456 572 acetolactate synthase catalytic subunit; Reviewed 80.51
PRK08611 576 pyruvate oxidase; Provisional 80.09
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.5e-122  Score=1009.42  Aligned_cols=497  Identities=58%  Similarity=0.953  Sum_probs=476.8

Q ss_pred             CccccCCCCccccCCCCHHHHHHHHHHHHHHHHHHhhccCCCCCCCccHHHHHHHHHhhcCCCCcEEEecCCchHHHHHH
Q 006251          140 TPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYVHKI  219 (654)
Q Consensus       140 ~~~l~~i~~p~~~~~l~~~~L~~la~~lR~~il~~v~~~~GH~gsslg~vel~~aL~~v~~~p~Dr~I~s~GH~aY~~~~  219 (654)
                      +|+|+.|++|.|+|.|+.+||++||+|||..+++.|+++|||+|++||+||+++|||++||.|.|+||||+|||+|+||+
T Consensus         2 ~~~L~~i~~P~dLk~ls~~eL~~La~EiR~~li~~vS~~GGHlgsnLGvVELTiALH~VF~sP~D~~IwDVgHQaYpHKi   81 (627)
T COG1154           2 YPLLDKINSPADLKKLSIEELPQLADEIREFLLEVVSATGGHLGSNLGVVELTIALHYVFDSPKDKLIWDVGHQAYPHKI   81 (627)
T ss_pred             cchhhhcCCHHHHhhCCHHHHHHHHHHHHHHHHHHhccCCCccCCCcChhhhhHHHHHHhCCCCCCeEEecCcccchhHH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCChHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhHHHHHHHHHHHHHcCCCCeEEEEEcCCCcccchHHHHHHHH
Q 006251          220 LTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNA  299 (654)
Q Consensus       220 l~Gr~~~l~~lrq~ggl~G~p~~~es~~~~fg~G~lG~~is~AlGmAlA~kl~g~~~~VvaviGDGal~eG~~~EAln~A  299 (654)
                      ||||++.|.++||.+|++|||+|.||+||.|++||+|++||+|+|||.|++++|++++||||||||+++.||+|||||+|
T Consensus        82 LTGR~e~f~tlRq~~GlsGf~~r~ESe~D~f~~GHsSTSiSaalG~A~A~~~~g~~~~vvaVIGDGAlt~GmA~EALN~a  161 (627)
T COG1154          82 LTGRREQFDTLRQKDGLSGFPKREESEHDWFGVGHSSTSISAALGMAKARDLKGEDRNVVAVIGDGALTGGMAFEALNNA  161 (627)
T ss_pred             hcCchhhcchhhhcCCCCCCCCcccCCCcccccCchHHHHHHHhhHHHHHHhcCCCCcEEEEECCccccchHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             h-hcCCCEEEEEECCCCCcccccccCCCCCchhhhhHHHHHhhhchhHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhc
Q 006251          300 G-FLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGL  378 (654)
Q Consensus       300 ~-~~~lnLi~Il~dN~~~s~pt~~~~g~~~~vgals~~l~~~~~~~~~~~~r~~~k~~~~~~g~~~~~~~~k~~~~~r~~  378 (654)
                      + ..+.|+|||+|||++++         ++++|+++++|+++++++.|+.+|+..|++++..|+++.+.++|+++.+|++
T Consensus       162 g~~~~~~~iVILNDNeMSI---------s~nvGal~~~L~~l~~~~~y~~~~~~~kk~l~~~~~~~~~~~~r~e~~~K~l  232 (627)
T COG1154         162 GADLKSNLIVILNDNEMSI---------SPNVGALSKHLARLRSGPFYQSLREGGKKVLSKVGPPLKRFAKRAEESIKGL  232 (627)
T ss_pred             hhccCCCEEEEEeCCCccc---------CCCccHHHHHHHHHhccchHHHHHHHHHHHHHhhchHHHHHHHHHHHhhhcc
Confidence            9 55699999999999976         5779999999999999999999999999999999999999999999999998


Q ss_pred             cCCChhhhhhhcCCeEEeecCCCCHHHHHHHHHHhHhCCCCCCEEEEEEeecCCCCChhhcCccccccccCCCC-ccccc
Q 006251          379 ISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDP-KTGKQ  457 (654)
Q Consensus       379 ~~~~~~~lfea~G~~~ig~vDGhDi~~L~~al~~ak~~~~~gP~lI~v~T~KG~G~~~ae~~~~~~Hg~~~f~~-~tg~~  457 (654)
                      +.+.  ++||++||+|++|+||||+++|+.+|+.+|+.  ++|++||+.|.|||||+++|+++.+||++.+||+ ++|++
T Consensus       233 ~~~~--~lFeelGf~YiGPiDGHni~~Li~~Lk~~kd~--~gPvllHv~T~KGKGY~pAE~d~~~~H~v~~f~~~~tg~~  308 (627)
T COG1154         233 LVPG--TLFEELGFNYIGPIDGHNLEELIPTLKNAKDL--KGPVLLHVVTKKGKGYKPAEEDPIKYHGVGPFDPIETGQS  308 (627)
T ss_pred             cCch--hhHHHhCCeeECCcCCCCHHHHHHHHHHHhcC--CCCEEEEEEecCCCCCChhhcChhhccCCCCCCccccCcc
Confidence            8874  89999999999999999999999999999986  8999999999999999999999999999999996 88887


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHhhCCcEEEEecCccCCCChhhHHHhCCCCccccchhHHHHHHHHHHHHhcCCeeEEee
Q 006251          458 FKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAI  537 (654)
Q Consensus       458 ~~~~~~~~s~~~a~~~aL~~~~~~d~~vvvl~aDlg~s~~l~~f~~~fp~R~id~GIaE~~mvg~AaGlA~~G~~Pi~~t  537 (654)
                      .+.++...+|+++|+++|.+.+++|+++|.+++.|..++|+..|.++||+||||+||||||+|++|+|||++|++|||++
T Consensus       309 ~~~~~~~~sys~vf~~~L~~~a~~d~~ivaITaAM~~gtGL~~F~~~fP~R~fDVGIAEQHAVT~AAGlA~~G~kPvvaI  388 (627)
T COG1154         309 KKSKPSAPSYTKVFGDTLCELAAKDEKIVAITAAMPEGTGLVKFSKKFPDRFFDVGIAEQHAVTFAAGLAAEGMKPVVAI  388 (627)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEecCCCCCCChHHHHHhCchhheehhhhHHHHHHHHHHHHhCCCCCEEEE
Confidence            66667778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhHHHHHHHhhhcCCCCEEEEEecCCccCCCCCCCCChhhHHHHhcCCCCEEEecCCHHHHHHHHHHHHhCCCCc
Q 006251          538 YSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRP  617 (654)
Q Consensus       538 fa~Fl~ra~dQI~~~~a~~~lpV~~v~~~~G~~g~dG~tHq~~edla~~r~iPnl~V~~PsD~~E~~~ll~~al~~~~~P  617 (654)
                      |++|+||||||+++|+|+|++||+|+.+++|++|+||+|||+++|+++||+||||.|++|+|++|++.|+.+++..+++|
T Consensus       389 YSTFLQRAYDQliHDvaiqnLPV~faIDRAGivG~DG~TH~G~fDls~l~~iPnmvi~aP~de~el~~ml~ta~~~~~gP  468 (627)
T COG1154         389 YSTFLQRAYDQLIHDVAIQNLPVTFAIDRAGIVGADGPTHQGLFDLSFLRCIPNMVIMAPRDEEELRQMLYTALAQDDGP  468 (627)
T ss_pred             ecHHHHHHHHHHHHHHHhccCCeEEEEecCcccCCCCCccccHHHHHHHhcCCCcEEecCCCHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999888899


Q ss_pred             EEEEecCCCCCCccCCCCCCCCCcccCceEEecc
Q 006251          618 SCFRFPRGNGIGAVLPPNNKGTPLETSLDSWPMS  651 (654)
Q Consensus       618 ~~ir~~r~~~~~~~~p~~~~~~~~~iGKa~vi~~  651 (654)
                      +.||+||++........  +..++++||.+++|+
T Consensus       469 ~AiRyPrg~~~~~~~~~--~~~~~~~Gk~~i~~~  500 (627)
T COG1154         469 VAIRYPRGNGVGVILTP--ELEPLEIGKGELLKE  500 (627)
T ss_pred             eEEEecCCCCCCCCccc--ccccccccceEEEec
Confidence            99999999866543322  246899999999876

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase Back     alignment and domain information
>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional Back     alignment and domain information
>PRK12753 transketolase; Reviewed Back     alignment and domain information
>PTZ00089 transketolase; Provisional Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02790 transketolase Back     alignment and domain information
>PRK12754 transketolase; Reviewed Back     alignment and domain information
>PRK05899 transketolase; Reviewed Back     alignment and domain information
>TIGR00232 tktlase_bact transketolase, bacterial and yeast Back     alignment and domain information
>COG0021 TktA Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B Back     alignment and domain information
>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase Back     alignment and domain information
>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional Back     alignment and domain information
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed Back     alignment and domain information
>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type Back     alignment and domain information
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05261 putative phosphoketolase; Provisional Back     alignment and domain information
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis Back     alignment and domain information
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2 Back     alignment and domain information
>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E Back     alignment and domain information
>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates Back     alignment and domain information
>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins Back     alignment and domain information
>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed Back     alignment and domain information
>PRK09212 pyruvate dehydrogenase subunit beta; Validated Back     alignment and domain information
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated Back     alignment and domain information
>PLN02683 pyruvate dehydrogenase E1 component subunit beta Back     alignment and domain information
>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion] Back     alignment and domain information
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional Back     alignment and domain information
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional Back     alignment and domain information
>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component Back     alignment and domain information
>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins Back     alignment and domain information
>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] Back     alignment and domain information
>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2 Back     alignment and domain information
>smart00861 Transket_pyr Transketolase, pyrimidine binding domain Back     alignment and domain information
>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] Back     alignment and domain information
>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed Back     alignment and domain information
>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha Back     alignment and domain information
>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion] Back     alignment and domain information
>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC) Back     alignment and domain information
>PLN02374 pyruvate dehydrogenase (acetyl-transferring) Back     alignment and domain information
>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex Back     alignment and domain information
>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>COG3957 Phosphoketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit Back     alignment and domain information
>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O Back     alignment and domain information
>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC) Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion] Back     alignment and domain information
>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins Back     alignment and domain information
>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed Back     alignment and domain information
>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) Back     alignment and domain information
>PRK06546 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08266 hypothetical protein; Provisional Back     alignment and domain information
>PRK09124 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06457 pyruvate dehydrogenase; Provisional Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>PRK06154 hypothetical protein; Provisional Back     alignment and domain information
>PRK12474 hypothetical protein; Provisional Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>TIGR01504 glyox_carbo_lig glyoxylate carboligase Back     alignment and domain information
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>PRK08273 thiamine pyrophosphate protein; Provisional Back     alignment and domain information
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>PLN02470 acetolactate synthase Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK08617 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>CHL00099 ilvB acetohydroxyacid synthase large subunit Back     alignment and domain information
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase Back     alignment and domain information
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK11269 glyoxylate carboligase; Provisional Back     alignment and domain information
>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK09259 putative oxalyl-CoA decarboxylase; Validated Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>PLN02573 pyruvate decarboxylase Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08327 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding Back     alignment and domain information
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] Back     alignment and domain information
>COG3962 Acetolactate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism] Back     alignment and domain information
>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion] Back     alignment and domain information
>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes Back     alignment and domain information
>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase Back     alignment and domain information
>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism] Back     alignment and domain information
>COG3960 Glyoxylate carboligase [General function prediction only] Back     alignment and domain information
>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated Back     alignment and domain information
>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins Back     alignment and domain information
>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated Back     alignment and domain information
>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains Back     alignment and domain information
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins Back     alignment and domain information
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric Back     alignment and domain information
>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated Back     alignment and domain information
>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed Back     alignment and domain information
>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit Back     alignment and domain information
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit Back     alignment and domain information
>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit Back     alignment and domain information
>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed Back     alignment and domain information
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins Back     alignment and domain information
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL) Back     alignment and domain information
>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase) Back     alignment and domain information
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions Back     alignment and domain information
>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways Back     alignment and domain information
>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX Back     alignment and domain information
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family Back     alignment and domain information
>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS Back     alignment and domain information
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria Back     alignment and domain information
>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family Back     alignment and domain information
>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation Back     alignment and domain information
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD) Back     alignment and domain information
>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion] Back     alignment and domain information
>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed Back     alignment and domain information
>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE) Back     alignment and domain information
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type Back     alignment and domain information
>PRK07064 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02418 acolac_catab acetolactate synthase, catabolic Back     alignment and domain information
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated Back     alignment and domain information
>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes Back     alignment and domain information
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated Back     alignment and domain information
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit Back     alignment and domain information
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc) Back     alignment and domain information
>PRK07524 hypothetical protein; Provisional Back     alignment and domain information
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl) Back     alignment and domain information
>PRK08199 thiamine pyrophosphate protein; Validated Back     alignment and domain information
>PRK07092 benzoylformate decarboxylase; Reviewed Back     alignment and domain information
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional Back     alignment and domain information
>PRK07282 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC) Back     alignment and domain information
>PRK08322 acetolactate synthase; Reviewed Back     alignment and domain information
>PRK07586 hypothetical protein; Validated Back     alignment and domain information
>PRK08155 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed Back     alignment and domain information
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv Back     alignment and domain information
>PRK05858 hypothetical protein; Provisional Back     alignment and domain information
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07710 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated Back     alignment and domain information
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated Back     alignment and domain information
>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor Back     alignment and domain information
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated Back     alignment and domain information
>PRK06112 acetolactate synthase catalytic subunit; Validated Back     alignment and domain information
>PRK06163 hypothetical protein; Provisional Back     alignment and domain information
>PRK06276 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Back     alignment and domain information
>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit Back     alignment and domain information
>PRK06456 acetolactate synthase catalytic subunit; Reviewed Back     alignment and domain information
>PRK08611 pyruvate oxidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
2o1s_A 621 1-Deoxy-D-Xylulose 5-Phosphate Synthase (Dxs) From 1e-124
2o1x_A 629 1-deoxy-d-xylulose 5-phosphate Synthase (dxs) From 1e-106
3mos_A 616 The Structure Of Human Transketolase Length = 616 1e-15
3ooy_A 616 Crystal Structure Of Human Transketolase (Tkt) Leng 2e-15
3uk1_A 711 Crystal Structure Of A Transketolase From Burkholde 4e-05
3upt_A 711 Crystal Structure Of A Transketolase From Burkholde 5e-05
1um9_B 324 Branched-chain 2-oxo Acid Dehydrogenase (e1) From T 1e-04
>pdb|2O1S|A Chain A, 1-Deoxy-D-Xylulose 5-Phosphate Synthase (Dxs) From Escherichia Coli Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  441 bits (1135), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/497 (46%), Positives = 311/497 (62%), Gaps = 14/497 (2%)
Query: 141 PLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFN 200
           P L  ++    ++ L  E L +L  ELR  +++SVS++ GH ++ LG VELT+ALH V+N
Sbjct: 9   PTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALHYVYN 68
Query: 201 TPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSIS 260
           TP D++IWDVGHQAY HKILTGRR ++ T+R+  GL  FP R ES +D    GHSSTSIS
Sbjct: 69  TPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSSTSIS 128
Query: 261 AGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPT 320
           AG+G+AVA +  GKN   + VIGDGA+TAG A+EA N+AG +  + +V+LNDN+      
Sbjct: 129 AGIGIAVAAEKEGKNRRTVCVIGDGAITAGXAFEAXNHAGDIRPDXLVILNDNEX----- 183
Query: 321 ATLDGPATPVGXXXXXXXXXXXXTNFRKLREAAKSITKQIGGQTHEVAAKVDEYARGLIS 380
                 +  VG              +  LRE  K +   +     E+  + +E+ +G + 
Sbjct: 184 ----SISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVP-PIKELLKRTEEHIKGXVV 238
Query: 381 ASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAA 440
               T FEELG  YIGPVDGH+V  L+T  +  +++   GP  +H+ T+KG+GY PAE  
Sbjct: 239 PG--TLFEELGFNYIGPVDGHDVLGLITTLKNXRDLK--GPQFLHIXTKKGRGYEPAEKD 294
Query: 441 ADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNY 500
               H V KFDP +G   K+     +Y++ F + L + A  D+K+ AI  A   G+G   
Sbjct: 295 PITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLXAITPAXREGSGXVE 354
Query: 501 FQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPV 560
           F ++FPDR FDV IAEQHAVTFAAGLA  G KP  AIYS+FLQR YDQV+HDV +QKLPV
Sbjct: 355 FSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPV 414
Query: 561 RFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCF 620
            FA+DRAG+VGADG TH GAFD++++ C+P  V+  PSDE E    + T    +D PS  
Sbjct: 415 LFAIDRAGIVGADGQTHQGAFDLSYLRCIPEXVIXTPSDENECRQXLYTGYHYNDGPSAV 474
Query: 621 RFPRGNGIGAVLPPNNK 637
           R+PRGN +G  L P  K
Sbjct: 475 RYPRGNAVGVELTPLEK 491
>pdb|2O1X|A Chain A, 1-deoxy-d-xylulose 5-phosphate Synthase (dxs) From Deinococcus Radiodurans Length = 629 Back     alignment and structure
>pdb|3MOS|A Chain A, The Structure Of Human Transketolase Length = 616 Back     alignment and structure
>pdb|3OOY|A Chain A, Crystal Structure Of Human Transketolase (Tkt) Length = 616 Back     alignment and structure
>pdb|3UK1|A Chain A, Crystal Structure Of A Transketolase From Burkholderia Thailandensis With An Oxidized Cysteinesulfonic Acid In The Active Site Length = 711 Back     alignment and structure
>pdb|3UPT|A Chain A, Crystal Structure Of A Transketolase From Burkholderia Pseudomallei Bound To Tpp, Calcium And Ribose-5-Phosphate Length = 711 Back     alignment and structure
>pdb|1UM9|B Chain B, Branched-chain 2-oxo Acid Dehydrogenase (e1) From Thermus Thermophilus Hb8 In Apo-form Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query654
2o1s_A 621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 0.0
2o1x_A 629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 0.0
3mos_A 616 Transketolase, TK; thiamin diphosphate TPP THDP en 6e-25
2bfd_B 342 2-oxoisovalerate dehydrogenase beta subunit; oxido 1e-06
1qs0_B 338 2-oxoisovalerate dehydrogenase beta-subunit; heter 1e-05
1umd_B 324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 1e-05
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 3e-05
1ik6_A 369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 3e-05
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 4e-05
1w85_B 324 Pyruvate dehydrogenase E1 component, beta subunit; 4e-05
3ahc_A 845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 5e-05
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 9e-05
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 1e-04
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Length = 621 Back     alignment and structure
 Score =  946 bits (2449), Expect = 0.0
 Identities = 242/504 (48%), Positives = 336/504 (66%), Gaps = 14/504 (2%)

Query: 134 SEEKPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTL 193
           S +    P L  ++    ++ L  E L +L  ELR  +++SVS++ GH ++ LG VELT+
Sbjct: 2   SFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTV 61

Query: 194 ALHRVFNTPDDKIIWDVGHQAYVHKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAG 253
           ALH V+NTP D++IWDVGHQAY HKILTGRR ++ T+R+  GL  FP R ES +D    G
Sbjct: 62  ALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVG 121

Query: 254 HSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAMNNAGFLDANLIVVLNDN 313
           HSSTSISAG+G+AVA +  GKN   + VIGDGA+TAG A+EAMN+AG +  +++V+LNDN
Sbjct: 122 HSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDN 181

Query: 314 KQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDE 373
            ++S+        +  VGAL++ L++L +   +  LRE  K +   +     E+  + +E
Sbjct: 182 -EMSI--------SENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVP-PIKELLKRTEE 231

Query: 374 YARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKG 433
           + +G++     T FEELG  YIGPVDGH+V  L+T  + ++++   GP  +H++T+KG+G
Sbjct: 232 HIKGMVV--PGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLK--GPQFLHIMTKKGRG 287

Query: 434 YPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMG 493
           Y PAE      H V KFDP +G   K+     +Y++ F + L + A  D+K++AI  AM 
Sbjct: 288 YEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMR 347

Query: 494 GGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCAIYSSFLQRGYDQVVHDV 553
            G+G+  F ++FPDR FDV IAEQHAVTFAAGLA  G KP  AIYS+FLQR YDQV+HDV
Sbjct: 348 EGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDV 407

Query: 554 DLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVI 613
            +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E   M+ T    
Sbjct: 408 AIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHY 467

Query: 614 DDRPSCFRFPRGNGIGAVLPPNNK 637
           +D PS  R+PRGN +G  L P  K
Sbjct: 468 NDGPSAVRYPRGNAVGVELTPLEK 491
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Length = 629 Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Length = 616 Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Length = 342 Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Length = 338 Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Length = 324 Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Length = 367 Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Length = 369 Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Length = 368 Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Length = 324 Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Length = 845 Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Length = 407 Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Length = 400 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query654
2o1x_A 629 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, 100.0
2o1s_A 621 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thia 100.0
3l84_A 632 Transketolase; TKT, structural genomics, center fo 100.0
3rim_A 700 Transketolase, TK; TPP, transferase; HET: TPP; 2.4 100.0
3m49_A 690 Transketolase; alpha-beta-alpha sandwich, csgid, t 100.0
3mos_A 616 Transketolase, TK; thiamin diphosphate TPP THDP en 100.0
3kom_A 663 Transketolase; rossmann fold, csgid, transferase, 100.0
1itz_A 675 Transketolase; calvin cycle, cofactor, thiamine py 100.0
3uk1_A 711 Transketolase; structural genomics, seattle struct 100.0
1gpu_A 680 Transketolase; transferase(ketone residues); HET: 100.0
2r8o_A 669 Transketolase 1, TK 1; reaction intermediate, calc 100.0
2e6k_A 651 Transketolase; structural genomics, NPPSFA, nation 100.0
1r9j_A 673 Transketolase; domains, EACH of the alpha/beta typ 100.0
2qtc_A 886 Pyruvate dehydrogenase E1 component; thiamin dipho 100.0
3ahc_A 845 Phosphoketolase, xylulose 5-phosphate/fructose 6-p 100.0
2jgd_A 933 2-oxoglutarate dehydrogenase E1 component; flavopr 100.0
2yic_A 868 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.9 100.0
2xt6_A 1113 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET 100.0
1ik6_A 369 Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, o 100.0
2ozl_B 341 PDHE1-B, pyruvate dehydrogenase E1 component subun 100.0
2bfd_B 342 2-oxoisovalerate dehydrogenase beta subunit; oxido 100.0
1w85_B 324 Pyruvate dehydrogenase E1 component, beta subunit; 100.0
1umd_B 324 E1-beta, 2-OXO acid dehydrogenase beta subunit; al 100.0
1qs0_B 338 2-oxoisovalerate dehydrogenase beta-subunit; heter 100.0
1umd_A367 E1-alpha, 2-OXO acid dehydrogenase alpha subunit; 99.97
1w85_A368 Pyruvate dehydrogenase E1 component, alpha subunit 99.93
2ozl_A365 PDHE1-A type I, pyruvate dehydrogenase E1 componen 99.93
2bfd_A400 2-oxoisovalerate dehydrogenase alpha subunit; oxid 99.92
1qs0_A407 2-oxoisovalerate dehydrogenase alpha-subunit; hete 99.91
4feg_A603 Pyruvate oxidase; carbanion, structure activity re 99.54
2uz1_A563 Benzaldehyde lyase; thiamine diphosphate, thiamine 99.42
1ozh_A566 ALS, acetolactate synthase, catabolic; acetohydrox 99.35
1ybh_A590 Acetolactate synthase, chloroplast; acetohydroxyac 99.31
1t9b_A677 Acetolactate synthase, mitochondrial; acetohydroxy 99.27
2vk8_A563 Pyruvate decarboxylase isozyme 1; asymmetric activ 99.26
2iht_A573 Carboxyethylarginine synthase; thiamin diphosphate 99.26
1q6z_A528 BFD, BFDC, benzoylformate decarboxylase; lyase, ca 99.25
2pan_A616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 99.25
2pgn_A589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 99.24
1v5e_A590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 99.23
3eya_A549 Pyruvate dehydrogenase [cytochrome]; pyruvate oxid 99.22
1ovm_A552 Indole-3-pyruvate decarboxylase; thiamine diphosph 99.21
2nxw_A565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 99.18
2vbi_A566 Pyruvate decarboxylase; thiamine pyrophosphate, ly 99.17
2vbf_A570 Branched-chain alpha-ketoacid decarboxylase; KDCA, 99.16
2c31_A568 Oxalyl-COA decarboxylase; oxalate, thiamin diphosp 99.16
2q28_A564 Oxalyl-COA decarboxylase; lyase, oxalate degradati 99.15
2wvg_A568 PDC, pyruvate decarboxylase; thiamine diphosphate, 99.14
3hww_A556 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 99.12
2x7j_A604 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene - 99.1
3lq1_A578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 99.02
1yd7_A 395 2-keto acid:ferredoxin oxidoreductase subunit alph 98.69
2c42_A1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 98.22
2c42_A 1231 Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, 97.29
1v5e_A 590 Pyruvate oxidase; oxidoreductase, flavoprotein; HE 88.15
1ybh_A 590 Acetolactate synthase, chloroplast; acetohydroxyac 86.78
2uz1_A 563 Benzaldehyde lyase; thiamine diphosphate, thiamine 84.59
2pgn_A 589 Cyclohexane-1,2-dione hydrolase (CDH); three alpha 84.14
1t9b_A 677 Acetolactate synthase, mitochondrial; acetohydroxy 83.52
1ozh_A 566 ALS, acetolactate synthase, catabolic; acetohydrox 83.32
2iht_A 573 Carboxyethylarginine synthase; thiamin diphosphate 83.12
2pan_A 616 Glyoxylate carboligase; thiamin-diphosphate (THDP) 81.98
2nxw_A 565 Phenyl-3-pyruvate decarboxylase; thiamine pyrophos 80.65
3lq1_A 578 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 80.1
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans} Back     alignment and structure
Probab=100.00  E-value=9.7e-94  Score=821.96  Aligned_cols=498  Identities=42%  Similarity=0.689  Sum_probs=418.0

Q ss_pred             CCCCccccCCCCccccCCCCHHHHHHHHHHHHHHHHHHhhccCCCCCCCccHHHHHHHHHhhcCCCCcEEEecCCchHHH
Q 006251          137 KPPTPLLDTINYPIHMKNLSTEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKIIWDVGHQAYV  216 (654)
Q Consensus       137 ~~~~~~l~~i~~p~~~~~l~~~~L~~la~~lR~~il~~v~~~~GH~gsslg~vel~~aL~~v~~~p~Dr~I~s~GH~aY~  216 (654)
                      .+.||||++|+.|.|+|+++.++|+++|+++|+.+++++++++||+|+++|+++++.+||++|+.|+|+||||+||++|+
T Consensus         7 ~~~~~~l~~i~~p~d~~~l~~~~l~~l~~~iR~~~~~~~~~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~~GH~~y~   86 (629)
T 2o1x_A            7 TSDTPLLDQIHGPKDLKRLSREQLPALTEELRGEIVRVCSRGGLHLASSLGAVDIITALHYVLDSPRDRILFDVGHQAYA   86 (629)
T ss_dssp             CCSCTTGGGCSSHHHHTTSCGGGHHHHHHHHHHHHHHHHTTSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEESSSTTCHH
T ss_pred             CCCCchhhhCCChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCcCCCchhHHHHHHHHHhhcCCCCCeEEecCchHHHH
Confidence            46789999999999999999999999999999999999998999999999999999999999987999999999999999


Q ss_pred             HHHHcCChHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhHHHHHHHHHHHHHcCCCCeEEEEEcCCCcccchHHHHH
Q 006251          217 HKILTGRRSRMNTMRKTSGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGAMTAGQAYEAM  296 (654)
Q Consensus       217 ~~~l~Gr~~~l~~lrq~ggl~G~p~~~es~~~~fg~G~lG~~is~AlGmAlA~kl~g~~~~VvaviGDGal~eG~~~EAl  296 (654)
                      |++++|+.+.+.++||++|++|||++.+++++.+++|++|+++|+|+|+|+|+|+++++++|||++|||++++|++||||
T Consensus        87 ~~~l~G~~~~~~~~r~~~g~~G~p~~~~s~~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GDG~~~~G~~~EaL  166 (629)
T 2o1x_A           87 HKILTGRRDQMADIKKEGGISGFTKVSESEHDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGDGSLTGGMALAAL  166 (629)
T ss_dssp             HHHTTTTGGGGGGTTSTTSCCSSCCGGGCTTCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHH
T ss_pred             HHHHhCcHhHHhCcccCCCCCCCCCCCCCCCCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEchhhhhccHHHHHH
Confidence            99999998889999999999999999899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCEEEEEECCCCCcccccccCCCCCchhhhhHHHHHhhhchhHHHHHHHHHHHHhhcCCchHHHHHHHHHHhh
Q 006251          297 NNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKVDEYAR  376 (654)
Q Consensus       297 n~A~~~~lnLi~Il~dN~~~s~pt~~~~g~~~~vgals~~l~~~~~~~~~~~~r~~~k~~~~~~g~~~~~~~~k~~~~~r  376 (654)
                      |+|+.+++|+++|||||++.+.         .+++.++..+++++..+.|..++...+++.+..|++..+...+..++.|
T Consensus       167 ~~A~~~~~pli~IvnnN~~~i~---------~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~  237 (629)
T 2o1x_A          167 NTIGDMGRKMLIVLNDNEMSIS---------ENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKNSTR  237 (629)
T ss_dssp             HHHHHHCCSEEEEEEECSBSSS---------BCCSSHHHHC---------------------------------------
T ss_pred             HHHHhhCCCEEEEEECCCCCCC---------CChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence            9999999999999999986531         2234444555666667777777666666655555554444444445555


Q ss_pred             hccCCChhhhhhhcCCeEEeecCCCCHHHHHHHHHHhHhCCCCCCEEEEEEeecCCCCChhhcCccccccccCCCCcccc
Q 006251          377 GLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGK  456 (654)
Q Consensus       377 ~~~~~~~~~lfea~G~~~ig~vDGhDi~~L~~al~~ak~~~~~gP~lI~v~T~KG~G~~~ae~~~~~~Hg~~~f~~~tg~  456 (654)
                      +++.+..+.+|++|||+++++|||||+++|.++++++++.  ++|++||++|.||+|++++|+++.+||+..+|++.++.
T Consensus       238 ~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~--~~P~lI~v~t~kg~G~~~~e~~~~~~H~~~~f~~~~~~  315 (629)
T 2o1x_A          238 HFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVDL--DGPTILHIVTTKGKGLSYAEADPIYWHGPAKFDPATGE  315 (629)
T ss_dssp             ------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTTS--SSEEEEEEECCTTTTCHHHHHCTTGGGSCCSBCTTTCC
T ss_pred             hhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHhc--CCCEEEEEEEecCCCCChhHcCCcccccCccCCcCcCc
Confidence            5444422378999999999899999999999999999874  79999999999999999999988899999999998875


Q ss_pred             cccCCCCchhHHHHHHHHHHHHHhhCCcEEEEecCccCCCChhhHHHhCCCCccccchhHHHHHHHHHHHHhcCCeeEEe
Q 006251          457 QFKTKSPTLTYTQYFAESLIKEAETDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLASEGVKPFCA  536 (654)
Q Consensus       457 ~~~~~~~~~s~~~a~~~aL~~~~~~d~~vvvl~aDlg~s~~l~~f~~~fp~R~id~GIaE~~mvg~AaGlA~~G~~Pi~~  536 (654)
                      ..+.  +..+|+++|+++|.+++++|++|+++++|+.+++++.+|+++||+||||+||+||+|+++|+|||++|++||++
T Consensus       316 ~~~~--~~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~~~~~~f~~~~~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~  393 (629)
T 2o1x_A          316 YVPS--SAYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGSGLVEFSRVHPHRYLDVGIAEEVAVTTAAGMALQGMRPVVA  393 (629)
T ss_dssp             BCCC--CCCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTTTCHHHHHHCGGGEEECCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccc--chHHHHHHHHHHHHHHhhhCcCEEEEeccccCCcChHHHHHhcCcceEeccccHHHHHHHHHHHHHcCCEEEEE
Confidence            4222  26789999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             ehHHHHHhHHHHHHHhhhcCCCCEEEEEecCCccCCCCCCCCChhhHHHHhcCCCCEEEecCCHHHHHHHHHHHHhCCCC
Q 006251          537 IYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDR  616 (654)
Q Consensus       537 tfa~Fl~ra~dQI~~~~a~~~lpV~~v~~~~G~~g~dG~tHq~~edla~~r~iPnl~V~~PsD~~E~~~ll~~al~~~~~  616 (654)
                      +|++|++|++|||++++|++++||+++++++|++|+||+|||+.+|+++||++|||+|++|+|++|++.++++|++ .++
T Consensus       394 ~~~~F~~~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~a~~-~~~  472 (629)
T 2o1x_A          394 IYSTFLQRAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKYAQT-HDG  472 (629)
T ss_dssp             EEHHHHGGGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHHHHH-SSS
T ss_pred             ecHHHHHHHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHHHHh-CCC
Confidence            9999999999999999999999999999999988899999999999999999999999999999999999999986 589


Q ss_pred             cEEEEecCCCCCCccCCCCCCCCCcccCceEEecc
Q 006251          617 PSCFRFPRGNGIGAVLPPNNKGTPLETSLDSWPMS  651 (654)
Q Consensus       617 P~~ir~~r~~~~~~~~p~~~~~~~~~iGKa~vi~~  651 (654)
                      |++||++|++.+..++   .+.+.+++||++++++
T Consensus       473 Pv~i~~~r~~~~~~~~---~~~~~~~~G~~~~~~~  504 (629)
T 2o1x_A          473 PFAIRYPRGNTAQVPA---GTWPDLKWGEWERLKG  504 (629)
T ss_dssp             CEEEECCSSBCCCCCT---TCCCCCCTTCCEEEEC
T ss_pred             CEEEEecCCCCCCCcc---cccccccCCceEEEee
Confidence            9999999987543222   1346789999998864
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli} Back     alignment and structure
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A* Back     alignment and structure
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis} Back     alignment and structure
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A* Back     alignment and structure
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A* Back     alignment and structure
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp} Back     alignment and structure
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A* Back     alignment and structure
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A* Back     alignment and structure
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A* Back     alignment and structure
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus} Back     alignment and structure
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 Back     alignment and structure
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A* Back     alignment and structure
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A* Back     alignment and structure
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B* Back     alignment and structure
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A* Back     alignment and structure
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis} Back     alignment and structure
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2 Back     alignment and structure
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B Back     alignment and structure
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ... Back     alignment and structure
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B* Back     alignment and structure
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B* Back     alignment and structure
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B Back     alignment and structure
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A* Back     alignment and structure
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A* Back     alignment and structure
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A* Back     alignment and structure
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ... Back     alignment and structure
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A Back     alignment and structure
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* Back     alignment and structure
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} Back     alignment and structure
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* Back     alignment and structure
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A* Back     alignment and structure
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* Back     alignment and structure
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A* Back     alignment and structure
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* Back     alignment and structure
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis} Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus} Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A* Back     alignment and structure
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A* Back     alignment and structure
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A* Back     alignment and structure
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A* Back     alignment and structure
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* Back     alignment and structure
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A* Back     alignment and structure
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A* Back     alignment and structure
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A* Back     alignment and structure
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} Back     alignment and structure
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* Back     alignment and structure
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 654
d2ieaa2415 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 com 3e-29
d1itza2192 c.36.1.6 (A:348-539) Transketolase (TK), Pyr modul 4e-27
d1gpua2197 c.36.1.6 (A:338-534) Transketolase (TK), Pyr modul 1e-26
d1r9ja1190 c.36.1.6 (A:337-526) Transketolase (TK), Pyr modul 2e-25
d2r8oa1195 c.36.1.6 (A:333-527) Transketolase (TK), Pyr modul 8e-25
d2r8oa2331 c.36.1.10 (A:2-332) Transketolase (TK), PP module 1e-21
d1umdb1186 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid 2e-20
d1itza1338 c.36.1.10 (A:10-347) Transketolase (TK), PP module 1e-12
d2bfdb1203 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid 3e-10
d1ik6a1191 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate deh 8e-10
d1qs0b1204 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase 8e-10
d2ozlb1192 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate deh 5e-09
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Length = 415 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: TK-like PP module
domain: Pyruvate dehydrogenase E1 component, PP module
species: Escherichia coli [TaxId: 562]

 Score =  118 bits (296), Expect = 3e-29
 Identities = 57/374 (15%), Positives = 109/374 (29%), Gaps = 59/374 (15%)

Query: 140 TPLLDTI---NYPIHMKNLSTEDLEQLAAELRADIVNSV-------SKTGGHLSANLGVV 189
           +  ++TI     P +  NL  E   ++ + +R + + +V        + GGH+++     
Sbjct: 2   SNYINTIPVEEQPEYPGNLELE--RRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSA 59

Query: 190 EL-TLALHRVFNTPDDKIIWDV----GHQA---YVHKILTGRRSRMNTMRKTSGLAGFP- 240
            +  +  +  F   +++   D+    GH +   Y    L GR ++         + G   
Sbjct: 60  TIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGL 119

Query: 241 ----KREESVHDAFGAGHSSTSISAGLGMAVAR--------DILGKNNNVISVIGDGAMT 288
                 +           S      G                       V + +GDG M 
Sbjct: 120 SSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMD 179

Query: 289 AGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFR- 347
             ++  A+  A     + +V + +     L     DGP T  G + + L  +     +  
Sbjct: 180 EPESKGAITIATREKLDNLVFVINCNLQRL-----DGPVTGNGKIINELEGIFEGAGWNV 234

Query: 348 -----KLREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDG-- 400
                  R          G     +   VD   +   S  G+   E     Y        
Sbjct: 235 IKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVA 294

Query: 401 ----HNVEDLVTIFQRVKEMPAPG---------PVLIHVVTEKGKGYPPAEAAADRMHGV 447
                 +  L       K++ A             +I   T KG G   A    +  H V
Sbjct: 295 DWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQV 354

Query: 448 VKFDPKTGKQFKTK 461
            K +    +  + +
Sbjct: 355 KKMNMDGVRHIRDR 368
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Length = 192 Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 197 Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Length = 190 Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Length = 195 Back     information, alignment and structure
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Length = 331 Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Length = 186 Back     information, alignment and structure
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Length = 338 Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 191 Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Length = 204 Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Length = 192 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query654
d2r8oa2331 Transketolase (TK), PP module {Escherichia coli [T 100.0
d1itza1338 Transketolase (TK), PP module {Maize (Zea mays) [T 100.0
d1gpua1335 Transketolase (TK), PP module {Baker's yeast (Sacc 100.0
d1r9ja2336 Transketolase (TK), PP module {Leishmania mexicana 100.0
d2ieaa2415 Pyruvate dehydrogenase E1 component, PP module {Es 100.0
d1itza2192 Transketolase (TK), Pyr module {Maize (Zea mays) [ 100.0
d1r9ja1190 Transketolase (TK), Pyr module {Leishmania mexican 100.0
d1gpua2197 Transketolase (TK), Pyr module {Baker's yeast (Sac 100.0
d2r8oa1195 Transketolase (TK), Pyr module {Escherichia coli [ 100.0
d1qs0b1204 2-oxoisovalerate dehydrogenase (E1B), Pyr module { 100.0
d1umdb1186 Branched-chain alpha-keto acid dehydrogenase, Pyr 100.0
d1w85b1192 Pyruvate dehydrogenase E1-beta, PdhB, N-terminal d 99.97
d2ozlb1192 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 99.97
d1ik6a1191 E1-beta subunit of pyruvate dehydrogenase, Pyr mod 99.97
d2bfdb1203 Branched-chain alpha-keto acid dehydrogenase, Pyr 99.97
d1w85a_365 Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus st 99.93
d1qs0a_407 2-oxoisovalerate dehydrogenase (E1B), PP module {P 99.92
d2bfda1395 Branched-chain alpha-keto acid dehydrogenase, PP m 99.92
d1umda_362 Branched-chain alpha-keto acid dehydrogenase, PP m 99.92
d2ozla1361 E1-beta subunit of pyruvate dehydrogenase (PP modu 99.91
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 99.47
d2ez9a3228 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 99.45
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 99.44
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 99.42
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 99.41
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 99.41
d1pvda3196 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 99.39
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 99.38
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 99.37
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 99.36
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 99.34
d2ieaa1230 Pyruvate dehydrogenase E1 component, Pyr module {E 99.05
d2c42a2447 Pyruvate-ferredoxin oxidoreductase, PFOR, domains 97.81
d2c42a1257 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I 95.3
d2ji7a3183 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 93.97
d2djia2184 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 93.78
d1q6za2180 Benzoylformate decarboxylase {Pseudomonas putida [ 93.08
d1t9ba3227 Acetohydroxyacid synthase catalytic subunit {Baker 92.77
d1t9ba2175 Acetohydroxyacid synthase catalytic subunit {Baker 92.14
d1ozha2181 Catabolic acetolactate synthase {Klebsiella pneumo 91.84
d2ez9a2174 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 90.54
d1q6za3183 Benzoylformate decarboxylase {Pseudomonas putida [ 90.31
d2ihta2186 Carboxyethylarginine synthase {Streptomyces clavul 89.56
d2ihta3198 Carboxyethylarginine synthase {Streptomyces clavul 89.07
d2ji7a2188 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 88.91
d1zpda2186 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 88.74
d1ybha3208 Acetohydroxyacid synthase catalytic subunit {Thale 87.42
d1ovma3196 Indole-3-pyruvate decarboxylase {Enterobacter cloa 85.21
d1ybha2195 Acetohydroxyacid synthase catalytic subunit {Thale 85.03
d1pvda2180 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 83.58
d1zpda3204 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 83.23
d2djia3229 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 81.64
d1ozha3192 Catabolic acetolactate synthase {Klebsiella pneumo 80.26
>d2r8oa2 c.36.1.10 (A:2-332) Transketolase (TK), PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiamin diphosphate-binding fold (THDP-binding)
superfamily: Thiamin diphosphate-binding fold (THDP-binding)
family: TK-like PP module
domain: Transketolase (TK), PP module
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-45  Score=384.83  Aligned_cols=234  Identities=26%  Similarity=0.400  Sum_probs=201.2

Q ss_pred             HHHHHHHHHHHHHHHhhc-cCCCCCCCccHHHHHHHHHhh-cC----C----CCcEEEecCCchH---HHHHHHcCC---
Q 006251          160 LEQLAAELRADIVNSVSK-TGGHLSANLGVVELTLALHRV-FN----T----PDDKIIWDVGHQA---YVHKILTGR---  223 (654)
Q Consensus       160 L~~la~~lR~~il~~v~~-~~GH~gsslg~vel~~aL~~v-~~----~----p~Dr~I~s~GH~a---Y~~~~l~Gr---  223 (654)
                      ++++|++||..+++||.+ ++||+|++||++|++++||.. ++    +    ++||||+|+||++   |+++.++|+   
T Consensus         3 ~~~~a~~iR~~~~d~v~~a~sGH~G~~ls~~~i~~~Ly~~~l~~~~~~p~~~~rDrfilSkGH~~~~~Ya~l~~~G~~~~   82 (331)
T d2r8oa2           3 RKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLP   82 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHHhccCcCCCCCCCCCeEEEeccchHHHHHHHHHHhCCCCC
Confidence            689999999999999987 789999999999999999864 32    2    3799999999999   888889996   


Q ss_pred             hHHHHHHHhcCC-CCCCCCCCCCCccccCcccchhhHHHHHHHHHHHHHcC----------CCCeEEEEEcCCCcccchH
Q 006251          224 RSRMNTMRKTSG-LAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDILG----------KNNNVISVIGDGAMTAGQA  292 (654)
Q Consensus       224 ~~~l~~lrq~gg-l~G~p~~~es~~~~fg~G~lG~~is~AlGmAlA~kl~g----------~~~~VvaviGDGal~eG~~  292 (654)
                      .++|.+||+.|+ ++|||.....+++.+++|++|+|+++|+|||+|.|+++          .+++|||++|||+++||++
T Consensus        83 ~e~l~~f~~~gs~~~ghp~~~~~~gve~stGsLG~Gl~~avG~Ala~k~~~~~~~~~~~~~~~~~v~~l~GDGel~EG~~  162 (331)
T d2r8oa2          83 MEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGIS  162 (331)
T ss_dssp             HHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHH
T ss_pred             HHHHHhcCCCCCCCCCCCCcCcCCCcccCcCchhhhhHHHHHHHHHHHHHhhhhccccccccCceEEEecccccccccch
Confidence            478899999987 89999987789999999999999999999999999754          3788999999999999999


Q ss_pred             HHHHHHHhhcC-CCEEEEEECCCCCcccccccCCCCCchhhhhHHHHHhhhchhHHHHHHHHHHHHhhcCCchHHHHHHH
Q 006251          293 YEAMNNAGFLD-ANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASTNFRKLREAAKSITKQIGGQTHEVAAKV  371 (654)
Q Consensus       293 ~EAln~A~~~~-lnLi~Il~dN~~~s~pt~~~~g~~~~vgals~~l~~~~~~~~~~~~r~~~k~~~~~~g~~~~~~~~k~  371 (654)
                      |||+++|++++ .||++|+|+|++++      +|.+..+.                                ..++.+| 
T Consensus       163 wEA~~~A~~~kL~nLi~i~D~N~~~~------~g~~~~~~--------------------------------~~~~~~r-  203 (331)
T d2r8oa2         163 HEVCSLAGTLKLGKLIAFYDDNGISI------DGHVEGWF--------------------------------TDDTAMR-  203 (331)
T ss_dssp             HHHHHHHHHTTCTTEEEEEEECSEET------TEEGGGTC--------------------------------CCCHHHH-
T ss_pred             hHhhhhcchhcccceeeHHhhhhhcc------cccccccc--------------------------------chhHHHH-
Confidence            99999999986 68999999998542      33322110                                1233333 


Q ss_pred             HHHhhhccCCChhhhhhhcCCeEEeecCCCCHHHHHHHHHHhHhCCCCCCEEEEEEeecCCCCChhhcCccccccccC
Q 006251          372 DEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVK  449 (654)
Q Consensus       372 ~~~~r~~~~~~~~~lfea~G~~~ig~vDGhDi~~L~~al~~ak~~~~~gP~lI~v~T~KG~G~~~ae~~~~~~Hg~~~  449 (654)
                                     |++|||+++.++||||+++|.+|+.++++. .++|++|+++|+||+|.+.+|+. .+||+.+.
T Consensus       204 ---------------f~afGw~vi~~~dghd~~~i~~A~~~a~~~-~~kP~~Ii~~TikGkG~~~~e~~-~~~Hg~~l  264 (331)
T d2r8oa2         204 ---------------FEAYGWHVIRDIDGHDAASIKRAVEEARAV-TDKPSLLMCKTIIGFGSPNKAGT-HDSHGAPL  264 (331)
T ss_dssp             ---------------HHHTTCEEEEEEETTCHHHHHHHHHHHHHC-CSSCEEEEEECCTTTTCTTTTTS-GGGTSSCC
T ss_pred             ---------------HHHcCCeeecccccchHHHHHHHHHHHHhh-cCCCccceeeeeeecCCcccCCC-chhhcCCC
Confidence                           999999998789999999999999998864 47899999999999999999865 68999874
>d1itza1 c.36.1.10 (A:10-347) Transketolase (TK), PP module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r9ja2 c.36.1.10 (A:1-336) Transketolase (TK), PP module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d2ieaa2 c.36.1.10 (A:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1itza2 c.36.1.6 (A:348-539) Transketolase (TK), Pyr module {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1r9ja1 c.36.1.6 (A:337-526) Transketolase (TK), Pyr module {Leishmania mexicana mexicana [TaxId: 44270]} Back     information, alignment and structure
>d1gpua2 c.36.1.6 (A:338-534) Transketolase (TK), Pyr module {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2r8oa1 c.36.1.6 (A:333-527) Transketolase (TK), Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qs0b1 c.36.1.7 (B:2-205) 2-oxoisovalerate dehydrogenase (E1B), Pyr module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1umdb1 c.36.1.7 (B:2-187) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1w85b1 c.36.1.7 (B:1-192) Pyruvate dehydrogenase E1-beta, PdhB, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2ozlb1 c.36.1.7 (B:0-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ik6a1 c.36.1.7 (A:1-191) E1-beta subunit of pyruvate dehydrogenase, Pyr module {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2bfdb1 c.36.1.7 (B:2-204) Branched-chain alpha-keto acid dehydrogenase, Pyr module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid dehydrogenase, PP module {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ozla1 c.36.1.11 (A:1-361) E1-beta subunit of pyruvate dehydrogenase (PP module) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ieaa1 c.36.1.6 (A:471-700) Pyruvate dehydrogenase E1 component, Pyr module {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]} Back     information, alignment and structure
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure