Citrus Sinensis ID: 006286

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650--

MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

cccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHccccEEEEccHHHHccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEcHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHccHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEcEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

ccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc

MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVlqyrgthrvaFMFAPVVILWLLSTtgigiynvikwnprvyqalSPYYIYKFFKytgrdgwtsLAGLFLcttgseamfadlgqfTAGSIKLAFCCIVFPCLVLQYMGQAAflsknfsaaplsfhasipdplrwpVLVVATLAAIVASQSVISATFSTVkqcyalgcfprvkvvhkarwvrgqvyipeINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSacmkipnggwvALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAqgsslgivrvpgIGLLFtelangvpptfthfltnlpaFYQVVVFICVktvplpyvhhkeryligrigpksyRMYRCIVRngykdvpnsgddfenDIVMSIAEFIQMEaegftnldapvdgWLAVVRTSEKFGKRLarsesdskeescsssfpitgscskspalQKLQSMYeqespdlnyrprvqfkltdtkfkDLRVKEELLQLLEAKCAGVSYIIGHSrikakwnapfLKRFVINVAYSFlrknsrspavflniphicLIEVGINYYL

MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTvplpyvhhkeryligrigpksyRMYRCIVRNgykdvpnsgdDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGkrlarsesdskeescsssfpitgscskSPALQKLQSMYEqespdlnyrprVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSrspavflniphiCLIEVGINYYL

MTSSPFKVFMERHKKTKTgllllvllgaalvFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPvlvvatlaaivasqsvisaTFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMAltfvstlltslvIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARsesdskeescsssFPITGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

************HKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRT*****************************************************PRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYY*

***SP***FMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG****************TSE*************************************************************************QLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKF************************SCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMSIAEFIQMEAEG********************************************************************YRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo

iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		652	2.2.26 [Sep-21-2011]
Q9FE38		775	Potassium transporter 3 O	yes	no	0.996	0.838	0.646	0.0
Q942X8		783	Probable potassium transp	yes	no	0.980	0.816	0.581	0.0
Q8H3P9		811	Potassium transporter 7 O	no	no	0.992	0.797	0.595	0.0
Q5ZC87		808	Probable potassium transp	no	no	0.993	0.801	0.541	0.0
Q9LD18		789	Potassium transporter 4 O	no	no	0.993	0.821	0.560	0.0
Q67VS5		843	Potassium transporter 10	no	no	0.987	0.763	0.476	1e-179
Q6YWQ4		770	Potassium transporter 25	no	no	0.957	0.810	0.487	1e-179
Q8W4I4		782	Potassium transporter 6 O	no	no	0.973	0.812	0.472	1e-178
Q5Z6K9		772	Potassium transporter 24	no	no	0.950	0.803	0.490	1e-176
Q7XIV8		788	Probable potassium transp	no	no	0.969	0.802	0.451	1e-174

>sp\|Q9FE38\|POT3_ARATH Potassium transporter 3 OS=Arabidopsis thaliana GN=POT3 PE=1 SV=1	Back alignment and function desciption

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/654 (64%), Positives = 529/654 (80%), Gaps = 4/654 (0%)

Query: 1   MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTR 60
           + SS FK  +ER+K++KT LL+LVL+G ++V +IGVLTPAISV SSIDGL  +   +H+ 
Sbjct: 124 LPSSAFKSLIERNKRSKTALLVLVLVGTSMVITIGVLTPAISVSSSIDGLVAKTSLKHS- 182

Query: 61  MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSP 120
            VV +AC +L+G FVLQ+RGT++VAF+FAP++ILWLL     G+YN++ WNP VY+ALSP
Sbjct: 183 TVVMIACALLVGLFVLQHRGTNKVAFLFAPIMILWLLIIATAGVYNIVTWNPSVYKALSP 242

Query: 121 YYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYM 180
           YYIY FF+ TG DGW SL G+ LC TG+EA+FA+LGQFTA SI+ AFCC+V+PCLVLQYM
Sbjct: 243 YYIYVFFRDTGIDGWLSLGGILLCITGTEAIFAELGQFTATSIRFAFCCVVYPCLVLQYM 302

Query: 181 GQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGC 240
           GQAAFLSKNFSA P SF++SIPDP  WPVL++A LAA+VASQ+VI ATFS VKQCYALGC
Sbjct: 303 GQAAFLSKNFSALPSSFYSSIPDPFFWPVLMMAMLAAMVASQAVIFATFSIVKQCYALGC 362

Query: 241 FPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 300
           FPRVK+VHK RWV GQ+YIPEINWV+MIL+LAVT+ FRDT  +A A+G ACM L FV+T 
Sbjct: 363 FPRVKIVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFVTTW 422

Query: 301 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVW 360
           L  L+I FVWN+++  ++L++LFFG+IE+I+++SA +KIP GGW+ L+ +  F  I YVW
Sbjct: 423 LMPLIINFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFITYVW 482

Query: 361 HYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPA 420
           HYGSRK+YL D HNKVPMK IL+ G SLGI++VPG+GL++TELA+GVP TF HFLTNLPA
Sbjct: 483 HYGSRKKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTNLPA 542

Query: 421 FYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIV 480
           FYQVVVF+C KTVP+PYV  KERYLIGRIGPK+YRMYRCI+R GYKDV   GDDFE+++V
Sbjct: 543 FYQVVVFVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFEDELV 602

Query: 481 MSIAEFIQMEAEGF--TNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITG 538
           MSIAEFIQ+E+EG+  +N D  +DG LAVV+ S KFG RL+RS S++     S S   T 
Sbjct: 603 MSIAEFIQLESEGYGGSNTDRSIDGRLAVVKASNKFGTRLSRSISEANIAGSSRS-QTTV 661

Query: 539 SCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYI 598
           + SKSPAL KL++ YEQE P L+ R   QF+  DTKF+  +VKEEL  L+ AK A V+YI
Sbjct: 662 TNSKSPALLKLRAEYEQELPRLSMRRMFQFRPMDTKFRQPQVKEELFDLVNAKDAEVAYI 721

Query: 599 IGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 652
           +GH  +KAK N+ F+K+ V+NVAYSFLRKN RSP V LNIPHICLI+VG+NYYL
Sbjct: 722 VGHGHVKAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIPHICLIKVGMNYYL 775

High-affinity potassium transporter required for tip growth of root hairs.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q5ZC87\|HAK3_ORYSJ Probable potassium transporter 3 OS=Oryza sativa subsp. japonica GN=HAK3 PE=2 SV=1	Back alignment and function description

>sp\|Q9LD18\|POT4_ARATH Potassium transporter 4 OS=Arabidopsis thaliana GN=POT4 PE=1 SV=2	Back alignment and function description

>sp\|Q67VS5\|HAK10_ORYSJ Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1	Back alignment and function description

>sp\|Q6YWQ4\|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1	Back alignment and function description

>sp\|Q8W4I4\|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1	Back alignment and function description

>sp\|Q5Z6K9\|HAK24_ORYSJ Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		652
224075034		776	predicted protein [Populus trichocarpa]	1.0	0.840	0.683	0.0
14149030		776	putative high-affinity potassium uptake	1.0	0.840	0.683	0.0
255537637		777	Potassium transporter, putative [Ricinus	0.995	0.835	0.674	0.0
297799628		775	hypothetical protein ARALYDRAFT_914233 [	0.996	0.838	0.645	0.0
30686261		775	Potassium transporter 3 [Arabidopsis tha	0.996	0.838	0.646	0.0
4454033		802	putative potassium transport protein [Ar	0.996	0.810	0.638	0.0
356527658		791	PREDICTED: potassium transporter 3-like	0.993	0.819	0.655	0.0
186701236		777	tiny root hair 1 protein [Capsella rubel	0.993	0.833	0.641	0.0
356513321		790	PREDICTED: potassium transporter 3-like	0.993	0.820	0.659	0.0
357121588		782	PREDICTED: potassium transporter 7-like	0.987	0.823	0.610	0.0

>gi\|224075034\|ref\|XP_002304528.1\| predicted protein [Populus trichocarpa] gi\|222841960\|gb\|EEE79507.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/653 (68%), Positives = 532/653 (81%), Gaps = 1/653 (0%)

Query: 1   MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTR 60
           + SS FK F+E HKK KT LL+LVL GAA+  +I + TPAIS+LSS++GLQV+ +N H  
Sbjct: 124 VVSSRFKKFVEGHKKMKTALLVLVLFGAAVFITIAIFTPAISILSSVEGLQVRAKNLHHG 183

Query: 61  MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSP 120
           M+V +A  +LIG FVLQ+ G HRVAF+FAP+VILWLLS   +GIYN+IKWNPRVYQALSP
Sbjct: 184 MLVIIALFLLIGLFVLQHYGMHRVAFIFAPIVILWLLSIAFVGIYNIIKWNPRVYQALSP 243

Query: 121 YYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYM 180
           YYIYKFF  TG+DGW SL G+ LC TG+E +FA LG FTA SI++AF  +V+PCLVLQYM
Sbjct: 244 YYIYKFFGETGKDGWISLGGILLCITGTEVIFAGLGHFTASSIRVAFSFVVYPCLVLQYM 303

Query: 181 GQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGC 240
           GQAAFLS+NFS+   SFH+SIPD L WPV V+ATLAAIVASQ+V+SATFS  KQC+ALGC
Sbjct: 304 GQAAFLSQNFSSVSTSFHSSIPDSLFWPVTVMATLAAIVASQAVVSATFSIAKQCHALGC 363

Query: 241 FPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 300
           FPR+K+VHK++WV  Q Y+PEINW LMIL LAVTVG +DT  L NAYG AC+   FV+T 
Sbjct: 364 FPRIKIVHKSKWVHRQTYVPEINWALMILCLAVTVGSQDTIHLGNAYGIACITGIFVTTC 423

Query: 301 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVW 360
           LTS++I FVW+++L +ALLY  FFG IEII++SS+CM+IP GGWV L+ + VF+++MYVW
Sbjct: 424 LTSMIIDFVWHKNLLVALLYFSFFGIIEIIFVSSSCMRIPKGGWVPLVLSAVFMSVMYVW 483

Query: 361 HYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPA 420
           HYGSRK+YLYDLHNK  MKWIL  GS LGIVR+PGIGL++TELA+GVP  F+ F+T+LP 
Sbjct: 484 HYGSRKKYLYDLHNKASMKWILTLGSDLGIVRIPGIGLVYTELASGVPAMFSQFITDLPT 543

Query: 421 FYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGD-DFENDI 479
           FYQVVVFICVKTVP+PYV  KERYLIGRIGPK Y+MYRCIVR GYKDV  + D DFEN I
Sbjct: 544 FYQVVVFICVKTVPIPYVSQKERYLIGRIGPKPYKMYRCIVRYGYKDVHENDDYDFENAI 603

Query: 480 VMSIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGS 539
           VMS+AEFIQ+EAEG   LD  VDG LAVVR+SE FGKR   SESD  +ES S S+P +GS
Sbjct: 604 VMSVAEFIQLEAEGGGTLDGSVDGRLAVVRSSENFGKRFMMSESDGNKESSSWSYPASGS 663

Query: 540 CSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYII 599
            S+S ALQKL+SMYE ESP+   R R+Q KL DT +KD RVKEE+L+LLEAK AGV+Y+I
Sbjct: 664 SSRSAALQKLKSMYELESPEFCNRRRIQLKLLDTTYKDSRVKEEILELLEAKDAGVAYVI 723

Query: 600 GHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 652
           GHS IKAKWNA F KR +INV  SFLRKN RSP+V LNIPHI LIEVG+NYYL
Sbjct: 724 GHSHIKAKWNATFWKRLLINVFLSFLRKNCRSPSVGLNIPHISLIEVGMNYYL 776

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|14149030\|emb\|CAC39168.1\| putative high-affinity potassium uptake transporter [Populus tremula x Populus tremuloides]	Back alignment and taxonomy information

>gi\|255537637\|ref\|XP_002509885.1\| Potassium transporter, putative [Ricinus communis] gi\|223549784\|gb\|EEF51272.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|297799628\|ref\|XP_002867698.1\| hypothetical protein ARALYDRAFT_914233 [Arabidopsis lyrata subsp. lyrata] gi\|297313534\|gb\|EFH43957.1\| hypothetical protein ARALYDRAFT_914233 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|30686261|ref|NP_194095.2| Potassium transporter 3 [Arabidopsis thaliana] gi|38503180|sp|Q9FE38.1|POT3_ARATH RecName: Full=Potassium transporter 3; Short=AtKT3; Short=AtKUP4; Short=AtPOT3; AltName: Full=Tiny root hair 1 protein gi|11181958|emb|CAC16137.1| tiny root hair 1 protein [Arabidopsis thaliana] gi|11181960|emb|CAC16138.1| tiny root hair 1 protein [Arabidopsis thaliana] gi|110741516|dbj|BAE98708.1| potassium transport like protein [Arabidopsis thaliana] gi|332659388|gb|AEE84788.1| Potassium transporter 3 [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|4454033\|emb\|CAA23030.1\| putative potassium transport protein [Arabidopsis thaliana] gi\|7269212\|emb\|CAB79319.1\| putative potassium transport protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|356527658\|ref\|XP_003532425.1\| PREDICTED: potassium transporter 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|186701236\|gb\|ACC91262.1\| tiny root hair 1 protein [Capsella rubella]	Back alignment and taxonomy information

>gi\|356513321\|ref\|XP_003525362.1\| PREDICTED: potassium transporter 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|357121588\|ref\|XP_003562500.1\| PREDICTED: potassium transporter 7-like [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		652
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.996	0.838	0.600	2.2e-215
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.993	0.821	0.519	4.2e-182
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.926	0.772	0.455	4.2e-150
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.748	0.685	0.471	4.6e-150
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.964	0.805	0.446	1.4e-149
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.980	0.804	0.420	3.6e-144
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.700	0.574	0.468	8e-127
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.743	0.611	0.445	8e-127
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.700	0.552	0.441	1.7e-124
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.699	0.554	0.434	9.7e-118

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2081 (737.6 bits), Expect = 2.2e-215, P = 2.2e-215
 Identities = 393/654 (60%), Positives = 487/654 (74%)

Query:     1 MTSSPFKVFMERHKKTKTXXXXXXXXXXXXXFSIGVLTPAISVLSSIDGLQVQLQNRHTR 60
             + SS FK  +ER+K++KT              +IGVLTPAISV SSIDGL  +   +H+ 
Sbjct:   124 LPSSAFKSLIERNKRSKTALLVLVLVGTSMVITIGVLTPAISVSSSIDGLVAKTSLKHST 183

Query:    61 MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSP 120
              VV +AC +L+G FVLQ+RGT++VAF+FAP++ILWLL     G+YN++ WNP VY+ALSP
Sbjct:   184 -VVMIACALLVGLFVLQHRGTNKVAFLFAPIMILWLLIIATAGVYNIVTWNPSVYKALSP 242

Query:   121 YYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYM 180
             YYIY FF+ TG DGW SL G+ LC TG+EA+FA+LGQFTA SI+ AFCC+V+PCLVLQYM
Sbjct:   243 YYIYVFFRDTGIDGWLSLGGILLCITGTEAIFAELGQFTATSIRFAFCCVVYPCLVLQYM 302

Query:   181 GQAAFLSKNFSAAPLSFHASIPDPLRWPXXXXXXXXXXXXXXXXXXXTFSTVKQCYALGC 240
             GQAAFLSKNFSA P SF++SIPDP  WP                   TFS VKQCYALGC
Sbjct:   303 GQAAFLSKNFSALPSSFYSSIPDPFFWPVLMMAMLAAMVASQAVIFATFSIVKQCYALGC 362

Query:   241 FPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMAXXXXXXX 300
             FPRVK+VHK RWV GQ+YIPEINWV+MIL+LAVT+ FRDT  +A A+G ACM        
Sbjct:   363 FPRVKIVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFVTTW 422

Query:   301 XXXXXIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVW 360
                  I FVWN+++  ++L++LFFG+IE+I+++SA +KIP GGW+ L+ +  F  I YVW
Sbjct:   423 LMPLIINFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFITYVW 482

Query:   361 HYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPA 420
             HYGSRK+YL D HNKVPMK IL+ G SLGI++VPG+GL++TELA+GVP TF HFLTNLPA
Sbjct:   483 HYGSRKKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTNLPA 542

Query:   421 FYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIV 480
             FYQVVVF+C KTVP+PYV  KERYLIGRIGPK+YRMYRCI+R GYKDV   GDDFE+++V
Sbjct:   543 FYQVVVFVCCKTVPIPYVPQKERYLIGRIGPKTYRMYRCIIRAGYKDVNKDGDDFEDELV 602

Query:   481 MSIAEFIQMEAEGF--TNLDAPVDGWLAVVRTSEKFGKRLARXXXXXXXXXXXXXFPITG 538
             MSIAEFIQ+E+EG+  +N D  +DG LAVV+ S KFG RL+R                T 
Sbjct:   603 MSIAEFIQLESEGYGGSNTDRSIDGRLAVVKASNKFGTRLSRSISEANIAGSSRS-QTTV 661

Query:   539 SCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYI 598
             + SKSPAL KL++ YEQE P L+ R   QF+  DTKF+  +VKEEL  L+ AK A V+YI
Sbjct:   662 TNSKSPALLKLRAEYEQELPRLSMRRMFQFRPMDTKFRQPQVKEELFDLVNAKDAEVAYI 721

Query:   599 IGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 652
             +GH  +KAK N+ F+K+ V+NVAYSFLRKN RSP V LNIPHICLI+VG+NYYL
Sbjct:   722 VGHGHVKAKRNSVFVKQLVVNVAYSFLRKNCRSPGVMLNIPHICLIKVGMNYYL 775

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;IGI;ISS

GO:0016020 "membrane" evidence=IEA;IDA;NAS

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IC

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009932 "cell tip growth" evidence=IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006486 "protein glycosylation" evidence=RCA

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FE38	POT3_ARATH	No assigned EC number	0.6467	0.9969	0.8387	yes	no
Q942X8	HAK2_ORYSJ	No assigned EC number	0.5817	0.9800	0.8160	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		652
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	1e-172
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-112
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	7e-81
TIGR00794		688	TIGR00794, kup, potassium uptake protein	6e-11
COG0531		466	COG0531, PotE, Amino acid transporters [Amino acid	2e-05

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

 Score =  918 bits (2374), Expect = 0.0
 Identities = 391/656 (59%), Positives = 498/656 (75%), Gaps = 10/656 (1%)

Query: 1   MTSSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTR 60
           + SSP K F+E+HK+ +T LLL+VL GA +V   GVLTPAISVLSS+ GLQV        
Sbjct: 136 VGSSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDG 195

Query: 61  MVVFLACLVLIGHFVLQYRGTHRVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSP 120
            +V LAC++L+G F LQ+ GTHRVAFMFAP+VI+WLLS   IG+YN+I WNP++  ALSP
Sbjct: 196 ELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSP 255

Query: 121 YYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGSIKLAFCCIVFPCLVLQYM 180
           YYI KFF+ TG+DGW SL G+ L  TG+EAMFADLG FTA SI+LAF  +++PCLV+QYM
Sbjct: 256 YYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYM 315

Query: 181 GQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGC 240
           GQAAFLSKN  + P SF+ SIPDP+ WPV V+ATLAAIV SQ+VI+ATFS VKQC+ALGC
Sbjct: 316 GQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGC 375

Query: 241 FPRVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTL 300
           FPRVKVVH ++ + GQ+YIPEINW+LMIL+LAVT+GFRDT  + NAYG ACM + F++T 
Sbjct: 376 FPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTF 435

Query: 301 LTSLVIYFVWNQSLFLALLYVLFFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVW 360
           L +LVI FVW +S+ LA L++LFFG IE +YLS+A MK+P GGWV L+ + +F++IMY+W
Sbjct: 436 LMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIW 495

Query: 361 HYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPA 420
           HYG+RK+Y +DLHNKV +KW+L  G SLGIVRVPGIGL+++ELA GVP  F+HF+TNLPA
Sbjct: 496 HYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPA 555

Query: 421 FYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIV 480
           F++V+VF+CVK+VP+PYV  +ER+LIGR+ P+ YRMYRCIVR GYKD+     DFEN +V
Sbjct: 556 FHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLV 615

Query: 481 MSIAEFIQMEAE---GFTNLDAPVDGWLAVVRTSEKFGKRLA-RSESDSKEESCSSSFPI 536
            SIAEFIQMEAE      +  +  DG +AV+ T +     L   SE +        S   
Sbjct: 616 QSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQE--LADIDDSI-- 671

Query: 537 TGSCSKSPALQKLQSMYEQESPDLNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVS 596
               SKS  LQ LQS YE E+P  + R RV+F+L +    D  V+EEL+ L+EAK AGV+
Sbjct: 672 --QSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVA 729

Query: 597 YIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIPHICLIEVGINYYL 652
           YI+GHS +KA+ ++ FLK+  I++ YSFLRKN R PAV LNIPHI LIEVG+ YY+
Sbjct: 730 YIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785

Length = 785

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		652
PLN00148		785	potassium transporter; Provisional	100.0
PLN00149		779	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	88.78
COG0531		466	PotE Amino acid transporters [Amino acid transport	81.91
TIGR00909		429	2A0306 amino acid transporter.	80.92

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=8.2e-217  Score=1810.77  Aligned_cols=645  Identities=61%  Similarity=1.056  Sum_probs=586.8

Q ss_pred             CchhHHHHhhccccchhhhHHHHhhhhhhhcCccccchhhhhhhhccceeccccCCcceeehhHHHHHHHHHhhhccccc
Q 006286            3 SSPFKVFMERHKKTKTGLLLLVLLGAALVFSIGVLTPAISVLSSIDGLQVQLQNRHTRMVVFLACLVLIGHFVLQYRGTH   82 (652)
Q Consensus         3 ~~~~~~~le~~~~~~~~ll~l~llG~~m~igDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~   82 (652)
                      +.++|++||+|+++|++++++|++|+||+||||+|||||||||||||||+..|++++++||+|||+||++||++||+||+
T Consensus       138 ~~~~k~~lE~~~~~~~~ll~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~  217 (785)
T PLN00148        138 SSPLKRFLEKHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTH  217 (785)
T ss_pred             hhHHHHHhhhchHHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccH
Confidence            35689999999999999999999999999999999999999999999999999998899999999999999999999999


Q ss_pred             chhhhhhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHhhcCccceeeccceeeeecchhhhhccCCCCCccc
Q 006286           83 RVAFMFAPVVILWLLSTTGIGIYNVIKWNPRVYQALSPYYIYKFFKYTGRDGWTSLAGLFLCTTGSEAMFADLGQFTAGS  162 (652)
Q Consensus        83 kvg~~F~PIm~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~  162 (652)
                      |||++|||||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|
T Consensus       218 kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~  297 (785)
T PLN00148        218 RVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAAS  297 (785)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeehhhhhhhHHHHhccccchhhccccccccCcccccccCcchHHHHHHHHHHHHHhhhhhhhchhhhHHHHHHcCCCC
Q 006286          163 IKLAFCCIVFPCLVLQYMGQAAFLSKNFSAAPLSFHASIPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFP  242 (652)
Q Consensus       163 Iriaw~~~V~P~L~L~Y~GQaA~l~~~p~~~~npFy~~iP~~~~~p~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fP  242 (652)
                      ||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++|||||
T Consensus       298 Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fP  377 (785)
T PLN00148        298 IRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFP  377 (785)
T ss_pred             eEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceEEecCCccCCcccchhhHHHHHHHhhheeEEecCchhHHHhhhhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 006286          243 RVKVVHKARWVRGQVYIPEINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLYVL  322 (652)
Q Consensus       243 r~ki~hTS~~~~GQIYIP~vNw~Lmi~~l~v~~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~vw~~~~~~~~~~~~  322 (652)
                      |+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|++
T Consensus       378 rvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~  457 (785)
T PLN00148        378 RVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLL  457 (785)
T ss_pred             CceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccccCCchHHHHHHHHHHHHHHHHHHhHHHHHhhhhcCCCChHHHHHhccCCCCCccCCcEEEEeC
Q 006286          323 FFGSIEIIYLSSACMKIPNGGWVALMFTTVFLAIMYVWHYGSRKRYLYDLHNKVPMKWILAQGSSLGIVRVPGIGLLFTE  402 (652)
Q Consensus       323 ~F~~ie~~f~sa~l~Kv~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~  402 (652)
                      +|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||+
T Consensus       458 ~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~  537 (785)
T PLN00148        458 FFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSE  537 (785)
T ss_pred             HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999988888999999999999


Q ss_pred             CCCCCchhhhhhhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEeeecccCCCchhhHHHHHHH
Q 006286          403 LANGVPPTFTHFLTNLPAFYQVVVFICVKTVPLPYVHHKERYLIGRIGPKSYRMYRCIVRNGYKDVPNSGDDFENDIVMS  482 (652)
Q Consensus       403 ~~~~vP~~~~h~~~~~~~lhev~Vfl~i~~~~vP~V~~~eR~~v~~l~~~~~~~yR~vvryGY~d~~~~~~~f~~~lv~~  482 (652)
                      +++|+|++|.||++|+|++||++||||||++|+|+||++|||+++|+++++||+|||++||||||.+++++|||++|+++
T Consensus       538 ~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~  617 (785)
T PLN00148        538 LATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQS  617 (785)
T ss_pred             CCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998889999999999


Q ss_pred             HHHHHHhhhccCC-C-C-CCCCCCcceeeecccccccccccccCCcccccCCCCCCccCCCCCCchhhhhhcccccCCCC
Q 006286          483 IAEFIQMEAEGFT-N-L-DAPVDGWLAVVRTSEKFGKRLARSESDSKEESCSSSFPITGSCSKSPALQKLQSMYEQESPD  559 (652)
Q Consensus       483 L~~FI~~e~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~s~~~~~~~~  559 (652)
                      |++|||+|+.+.+ + + .+++|++++++++++..+++....+++   +..+..+.. .+ +.+.+.++.++.++.++++
T Consensus       618 L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~  692 (785)
T PLN00148        618 IAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQ---ELADIDDSI-QS-SKSLTLQSLQSAYEDENPG  692 (785)
T ss_pred             HHHHHHhhhhccccccccccccccccccccccccccccccccccc---ccccccccc-cc-ccccccccccccccccccc
Confidence            9999999975321 0 1 111144566654433211110000000   000000000 00 0111222334444444454


Q ss_pred             CCCCCcccccccCccccchhHHHHHHHHHHHHhcCcEEEEeecEEEecCCCchhHHHHHHHHHHHHHhhcCCCCcccccC
Q 006286          560 LNYRPRVQFKLTDTKFKDLRVKEELLQLLEAKCAGVSYIIGHSRIKAKWNAPFLKRFVINVAYSFLRKNSRSPAVFLNIP  639 (652)
Q Consensus       560 ~~~~~~~~f~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~ar~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IP  639 (652)
                      ..++++++|+.+++.+.+++++||+++|++|||+||+||+||++|||||+|+|+||++||++|+|||||||+|.++|+||
T Consensus       693 ~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IP  772 (785)
T PLN00148        693 QSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIP  772 (785)
T ss_pred             cccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCC
Confidence            45677888876655556789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEeeeEEEC
Q 006286          640 HICLIEVGINYYL  652 (652)
Q Consensus       640 h~~LlEVGmvY~v  652 (652)
                      |+|||||||+|||
T Consensus       773 h~~LleVGM~Y~V  785 (785)
T PLN00148        773 HISLIEVGMIYYV  785 (785)
T ss_pred             hHHeEEcceEEEC
Confidence            9999999999997

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR00909 2A0306 amino acid transporter	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		652
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
3lvg_D		190	LCB, clathrin light chain B; SELF assembly, coated	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 45.2 bits (106), Expect = 7e-05
 Identities = 71/500 (14%), Positives = 132/500 (26%), Gaps = 141/500 (28%)

Query: 201 IPDPLRWPVLVVATLAAIVASQSVISATFSTVKQCYALGCFPRVKVVHKARWVRGQVYIP 260
           + D  +  +L    +  I+ S+  +S T                +     ++V  +V   
Sbjct: 38  VQDMPK-SILSKEEIDHIIMSKDAVSGTL------RLFWTLLSKQEEMVQKFV-EEVLRI 89

Query: 261 EINWVLMILSLAVTVGFRDTNRLANAYGSACMALTFVSTLLTSLVIYFVWNQSLFLALLY 320
              +    L   +    R  + +   Y      L   + +      Y V     +L L  
Sbjct: 90  NYKF----LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK---YNVSRLQPYLKLRQ 142

Query: 321 VLFFGSIEIIYLSSACMKIPNGGWVAL--MFTTVFLAIMYVWHYGSRKRYL-------YD 371
            L              +++     V +  +              GS K ++       Y 
Sbjct: 143 AL--------------LELRPAKNVLIDGVL-------------GSGKTWVALDVCLSYK 175

Query: 372 LHNKVPMK--WILAQGSSLGIVRVPGIGLLFTELANGVPPTFTHFLTNLPAFYQVVVFIC 429
           +  K+  K  W+     +L     P      T L           L  L   YQ+     
Sbjct: 176 VQCKMDFKIFWL-----NLKNCNSPE-----TVLEM---------LQKL--LYQIDPNWT 214

Query: 430 V-----KTVPLPYVHHKE--RYLIGRIGPKSYRMYRC--IVRNGYKDVPNSG--DDFEND 478
                   + L     +   R L+     K Y    C  ++     +V N+   + F   
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKS---KPYE--NCLLVLL----NVQNAKAWNAFNLS 265

Query: 479 --IVM-----SIAEFIQMEAEGFTNLDAPVDGWLAVVRTSEKFGKRLARSESDSKEESCS 531
             I++      + +F+        +LD      L          K L     D   E  +
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 532 SSFP-----ITGSCSKSPA---------LQKLQSM----YEQESPDLNYRPR-VQFKLTD 572
           ++ P     I  S     A           KL ++         P   YR    +  +  
Sbjct: 325 TN-PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRLSV-- 380

Query: 573 TKF-KDLRVKEELLQLL--EAKCAGVSYIIGHSRIK---AKWNAPFLKRFVINVAY-SFL 625
             F     +   LL L+  +   + V  ++          K          I   Y    
Sbjct: 381 --FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES--TISIPSIYLELK 436

Query: 626 RKNSRSPAVFLNIPHICLIE 645
            K     A+     H  +++
Sbjct: 437 VKLENEYAL-----HRSIVD 451

PyMOL of 1vt4

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		652
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	96.64
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	96.54
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	95.87

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

Probab=96.64  E-value=0.049  Score=58.58  Aligned_cols=85  Identities=15%  Similarity=0.153  Sum_probs=48.9

Q ss_pred             eehhHHHHHHHHHhhhcccccchhhhhhhH----HHHHHHHHHHhhhhhhcccCccee----eecChHHHHHHHhhcCcc
Q 006286           62 VVFLACLVLIGHFVLQYRGTHRVAFMFAPV----VILWLLSTTGIGIYNVIKWNPRVY----QALSPYYIYKFFKYTGRD  133 (652)
Q Consensus        62 vv~is~~ILv~LF~~Q~~GT~kvg~~F~PI----m~~Wf~~i~~~Giyni~~~~p~Vl----~A~nP~y~~~f~~~~~~~  133 (652)
                      ...+++++++++..+--+|....+++..-.    +++-++.+.++|++.+...+|.-+    ..+.|.+       .+..
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  202 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDF-------SKVG  202 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCT-------TSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCc-------ccch
Confidence            456788888888899999988777654332    222344455667766554333211    1222211       1234


Q ss_pred             ceeeccceeeeecchhhhhc
Q 006286          134 GWTSLAGLFLCTTGSEAMFA  153 (652)
Q Consensus       134 g~~~LG~v~L~iTG~EAlyA  153 (652)
                      +|..+..++.+.+|-|+.-.
T Consensus       203 ~~~~~~~~~~a~~G~e~~~~  222 (511)
T 4djk_A          203 TLVVFVAFILSYMGVEASAT  222 (511)
T ss_dssp             TTTTHHHHHHHHTTGGGGTG
T ss_pred             HHHHHHHHHHHHhhHHHHHH
Confidence            56667788899999998643

PyMOL of 4djk

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00