Citrus Sinensis ID: 006371

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------65

MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA

ccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEccccccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEHHHHHHHHHHHHHHHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccEEEEEccccccccHHHHHHHHHHcccccEEEEEEEEEEEccccccccccEEEEEEccccEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc

cccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHcccccccccccHHHHHHcccccccHHHHHHHHHcHHHHHHHHHHHHHHHHEEEccccccHHHHHHHHHcccEccccccccccEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEHccHHHHHHccHHHHHHHHHHcccccHHHccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEccccHHHEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccEEEEEEcEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEEEEEcc

mplkspteddylGIYSIMFWTLTLIGVVKYASIAlkaddqgeggTFALYSLLSRKMDigffsaknldsnsifhegaenksrlgKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSamdgirapfpsVSKSLVEALSAIILIVLFLMQKfgtsrvsflfspimgawtfstplvgIYSIIHHYpgifkalsphytfhffwrkgkegwllLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAylirhpndhedgfykfipksvywpIFIIATLAAIVASQSLISATFSVIkqsvvldyfprvkvvhtssnkegevyspeVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVftkipeggwipFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLErlgtllsdpgvqrvpglcffytnihqdgltpILGHYIKNMRSLHKVTVFTTLRYllvprvapeeRIIVRKLGLKGVYGCVIQYgyadtlnlegndFVNQVTDCLREHIEKYldclpsnpvdIQEEISALEeaklsdvihvrgktrfyigkncKRFDRIMLAFYEVLHSNCrsalpalsvplsqrievgmlyea

mplkspteDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVvhtssnkegevysPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRyllvprvapeerIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALeeaklsdvihvrgktrfyigknckRFDRIMLAFYEVLHSNCRSalpalsvplsqriEVGMLYEA

MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGvvvslvmlittilltlvmiviWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA

*********DYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGM****

*****PTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN********************FEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYE*

********DDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA

****SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		648	2.2.26 [Sep-21-2011]
Q67UC7		707	Probable potassium transp	yes	no	0.990	0.908	0.701	0.0
Q6YSA9		697	Probable potassium transp	no	no	0.981	0.912	0.664	0.0
Q84YJ9		739	Potassium transporter 26	no	no	0.962	0.844	0.465	1e-163
Q5JMH0		748	Potassium transporter 6 O	no	no	0.975	0.844	0.451	1e-154
O22397		712	Potassium transporter 1 O	yes	no	0.981	0.893	0.398	1e-139
Q8H3P9		811	Potassium transporter 7 O	no	no	0.856	0.684	0.438	1e-134
Q9M7J9		781	Potassium transporter 8 O	no	no	0.987	0.819	0.385	1e-132
Q9M7K4		785	Potassium transporter 5 O	no	no	0.978	0.807	0.376	1e-132
Q7XIV8		788	Probable potassium transp	no	no	0.890	0.732	0.405	1e-130
Q942X8		783	Probable potassium transp	no	no	0.839	0.694	0.427	1e-130

>sp\|Q67UC7\|HAK17_ORYSJ Probable potassium transporter 17 OS=Oryza sativa subsp. japonica GN=HAK17 PE=2 SV=2	Back alignment and function desciption

 Score =  940 bits (2430), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/653 (70%), Positives = 539/653 (82%), Gaps = 11/653 (1%)

Query: 1   MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGF 60
           M L SPTE DYLGIYSIMFWTLTLIGVVKY  IAL ADD GEGGTFA+YSLL R  DIG 
Sbjct: 59  MNLSSPTEADYLGIYSIMFWTLTLIGVVKYVCIALNADDHGEGGTFAMYSLLCRHADIGI 118

Query: 61  FSAKNL--DSNSIFHEG---AENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTP 115
             +K +  + + + H     A   SRLGKFFE+SI ARR+LLF+A+LGMCMLIGDGILTP
Sbjct: 119 LPSKRVYAEEDPLLHSQSAIARRPSRLGKFFEQSITARRVLLFVAVLGMCMLIGDGILTP 178

Query: 116 AISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFST 175
           AISVLSA+DGIR PFP+VSK +VEALSA ILI LFL+QK+GTS+VSFLFSPIM AWTF+T
Sbjct: 179 AISVLSAIDGIRGPFPTVSKPVVEALSAAILIGLFLLQKYGTSKVSFLFSPIMAAWTFTT 238

Query: 176 PLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFN 235
           P++G+YSI+H+YPGIFKA+SP+Y  HFF R  ++GW LLGGTVLCITG+EA+FADLGHF+
Sbjct: 239 PIIGLYSIVHYYPGIFKAISPYYIVHFFLRNKRQGWQLLGGTVLCITGAEAMFADLGHFS 298

Query: 236 RSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIV 295
           + +IQ+AFL +IYPSLVLTYAGQTAYLI + ND  DGFYKF+P+ VYWP+F++ATLAAIV
Sbjct: 299 KKAIQIAFLSSIYPSLVLTYAGQTAYLINNVNDFGDGFYKFVPRPVYWPMFVVATLAAIV 358

Query: 296 ASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGE 355
           ASQSLISATFSVIKQSVVLDYFPRVKVVHTS +KEGEVYSPE+NYILM+LCV VIL FG 
Sbjct: 359 ASQSLISATFSVIKQSVVLDYFPRVKVVHTSQHKEGEVYSPEINYILMVLCVGVILGFGG 418

Query: 356 GKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKI 415
           GK IGNAFGVVV +VMLITT+LLTLVMI+IWRTP +L  LYF+ FF MEG YVSAVFTKI
Sbjct: 419 GKAIGNAFGVVVIMVMLITTVLLTLVMIIIWRTPLVLAGLYFVPFFIMEGAYVSAVFTKI 478

Query: 416 PEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFF 475
           PEGGW+PFA+S  LA IMFGW+ GRQ+K EYE+T+K+ LE LG LL+ P VQRVPGLCFF
Sbjct: 479 PEGGWLPFAVSITLAMIMFGWYYGRQRKFEYEMTNKVSLEHLGELLARPEVQRVPGLCFF 538

Query: 476 YTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCV 535
           Y+NI QDGLTPIL HYIKNM SLH VT+F TLR LLV +V   +RI++ +LG  GVYGC 
Sbjct: 539 YSNI-QDGLTPILSHYIKNMSSLHTVTIFVTLRSLLVAKVDQSKRILINRLGPNGVYGCT 597

Query: 536 IQYGYADTLNLE-GNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIH 594
           +QYGYAD L+LE G+D   QVT CL+ HI+   D   S     +EE++ LE A+L+ V+H
Sbjct: 598 VQYGYADNLSLEGGDDLAAQVTSCLQWHIQMDTDGRRSP----EEEMAQLEAARLAGVVH 653

Query: 595 VRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYE 647
           VRGK RFY+G++   FD+IML FYE LH  CRSALP L +PL QR+E+GMLY+
Sbjct: 654 VRGKMRFYVGEDAGWFDKIMLGFYEFLHGICRSALPVLGMPLQQRVEIGMLYK 706

High-affinity potassium transporter.
Oryza sativa subsp. japonica (taxid: 39947)

>sp\|Q6YSA9\|HAK4_ORYSJ Probable potassium transporter 4 OS=Oryza sativa subsp. japonica GN=HAK4 PE=2 SV=1	Back alignment and function description

>sp\|Q84YJ9\|HAK26_ORYSJ Potassium transporter 26 OS=Oryza sativa subsp. japonica GN=HAK26 PE=2 SV=1	Back alignment and function description

>sp\|Q5JMH0\|HAK6_ORYSJ Potassium transporter 6 OS=Oryza sativa subsp. japonica GN=HAK6 PE=2 SV=1	Back alignment and function description

>sp\|O22397\|POT1_ARATH Potassium transporter 1 OS=Arabidopsis thaliana GN=POT1 PE=1 SV=2	Back alignment and function description

>sp\|Q8H3P9\|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3	Back alignment and function description

>sp\|Q9M7J9\|POT8_ARATH Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2	Back alignment and function description

>sp\|Q9M7K4\|POT5_ARATH Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	Back alignment and function description

>sp\|Q7XIV8\|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1	Back alignment and function description

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		648
255561773		733	Potassium transporter, putative [Ricinus	0.998	0.882	0.834	0.0
224108187		679	predicted protein [Populus trichocarpa]	0.996	0.951	0.825	0.0
224101953		688	predicted protein [Populus trichocarpa]	0.996	0.938	0.834	0.0
225424516		685	PREDICTED: probable potassium transporte	0.986	0.932	0.823	0.0
356525022		723	PREDICTED: probable potassium transporte	0.993	0.890	0.794	0.0
38194466		718	KUP-related potassium transporter [Lotus	0.996	0.899	0.778	0.0
297737559		641	unnamed protein product [Vitis vinifera]	0.952	0.962	0.817	0.0
357153858		780	PREDICTED: probable potassium transporte	0.993	0.825	0.702	0.0
218202247		707	hypothetical protein OsI_31583 [Oryza sa	0.990	0.908	0.702	0.0
115479447		707	Os09g0448200 [Oryza sativa Japonica Grou	0.990	0.908	0.701	0.0

>gi\|255561773\|ref\|XP_002521896.1\| Potassium transporter, putative [Ricinus communis] gi\|223538934\|gb\|EEF40532.1\| Potassium transporter, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1130 bits (2922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/653 (83%), Positives = 595/653 (91%), Gaps = 6/653 (0%)

Query: 1   MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGF 60
           MPL SPTE+DYLGIYSIMFWTLTLIGVVKY+ IALKADD GEGGTFALYSLL R ++I  
Sbjct: 82  MPLNSPTEEDYLGIYSIMFWTLTLIGVVKYSYIALKADDHGEGGTFALYSLLCRNINIRI 141

Query: 61  FSAKNLD-----SNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTP 115
            S+K+ +     SNS+ HE AENK RLGKFFE+S++ARR+LLFIAMLG CMLIGDGILTP
Sbjct: 142 LSSKHGEPSLNFSNSVLHESAENKCRLGKFFERSLVARRVLLFIAMLGTCMLIGDGILTP 201

Query: 116 AISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFST 175
           AISVLSAMDG+RAPFPSV KSLVEALSA +LIVLFL+Q FGTSRVSF+FSPIMGAWT  T
Sbjct: 202 AISVLSAMDGVRAPFPSVKKSLVEALSAAVLIVLFLLQTFGTSRVSFVFSPIMGAWTLFT 261

Query: 176 PLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFN 235
           PLVGIYSI  HYPGIFKALSPHY FHFFWR GKEGWL LGGT+LCITGSEA+FADLGHFN
Sbjct: 262 PLVGIYSITQHYPGIFKALSPHYIFHFFWRNGKEGWLKLGGTILCITGSEAMFADLGHFN 321

Query: 236 RSSIQMAFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIV 295
           R SIQMAFLFTIYPSLVLTYAGQTAYLI+HPNDH+DGFYKFIP+ +YWPIF++ATLAAIV
Sbjct: 322 RRSIQMAFLFTIYPSLVLTYAGQTAYLIKHPNDHKDGFYKFIPQKIYWPIFVVATLAAIV 381

Query: 296 ASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGE 355
           ASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFG+
Sbjct: 382 ASQSLISATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGD 441

Query: 356 GKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKI 415
           G+DIG AFGVVVSLVMLITTILLTLVMI+IWR+P LLVALYF VFFTMEGVYVSAV  KI
Sbjct: 442 GQDIGYAFGVVVSLVMLITTILLTLVMIIIWRSPPLLVALYFFVFFTMEGVYVSAVLVKI 501

Query: 416 PEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFF 475
           PEGGWIPFAISF LAFIMFGWF GRQ+KIEYELTHKIDL RL  LL DPGVQRVPGLCFF
Sbjct: 502 PEGGWIPFAISFILAFIMFGWFYGRQRKIEYELTHKIDLGRLEVLLLDPGVQRVPGLCFF 561

Query: 476 YTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCV 535
           YTNI QDGLTPILGHYIKNM+SLHKVT+FTTLRYLLVP+VAP ERI+V KLGL+GVYGCV
Sbjct: 562 YTNI-QDGLTPILGHYIKNMKSLHKVTIFTTLRYLLVPKVAPHERIVVNKLGLRGVYGCV 620

Query: 536 IQYGYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQEEISALEEAKLSDVIHV 595
           IQYGYAD LNLEG+DFV+QVTD LR HI+    CLPS+P +IQ+EISA E+AK++ V+H+
Sbjct: 621 IQYGYADALNLEGDDFVSQVTDSLRMHIQNCQGCLPSDPQEIQDEISAFEQAKMAGVVHI 680

Query: 596 RGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPALSVPLSQRIEVGMLYEA 648
           RGKTRFYIG+NC  FDRIMLAFYEV+H+NCRSALPAL VP ++RIEVGMLYEA
Sbjct: 681 RGKTRFYIGENCSWFDRIMLAFYEVMHNNCRSALPALGVPPTKRIEVGMLYEA 733

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224108187\|ref\|XP_002314752.1\| predicted protein [Populus trichocarpa] gi\|222863792\|gb\|EEF00923.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224101953\|ref\|XP_002312488.1\| predicted protein [Populus trichocarpa] gi\|222852308\|gb\|EEE89855.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225424516\|ref\|XP_002281786.1\| PREDICTED: probable potassium transporter 17-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356525022\|ref\|XP_003531126.1\| PREDICTED: probable potassium transporter 17-like [Glycine max]	Back alignment and taxonomy information

>gi\|38194466\|gb\|AAR13240.1\| KUP-related potassium transporter [Lotus japonicus]	Back alignment and taxonomy information

>gi\|297737559\|emb\|CBI26760.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357153858\|ref\|XP_003576590.1\| PREDICTED: probable potassium transporter 17-like [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|218202247\|gb\|EEC84674.1\| hypothetical protein OsI_31583 [Oryza sativa Indica Group]	Back alignment and taxonomy information

>gi|115479447|ref|NP_001063317.1| Os09g0448200 [Oryza sativa Japonica Group] gi|82592899|sp|Q67UC7.2|HAK17_ORYSJ RecName: Full=Probable potassium transporter 17; AltName: Full=OsHAK17 gi|51535868|dbj|BAD37951.1| putative HAK4 [Oryza sativa Japonica Group] gi|51536119|dbj|BAD38243.1| putative HAK4 [Oryza sativa Japonica Group] gi|113631550|dbj|BAF25231.1| Os09g0448200 [Oryza sativa Japonica Group] gi|215696980|dbj|BAG90974.1| unnamed protein product [Oryza sativa Japonica Group] gi|222641693|gb|EEE69825.1| hypothetical protein OsJ_29574 [Oryza sativa Japonica Group]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		648
TAIR\|locus:2045639		712	KT1 "potassium transporter 1"	0.981	0.893	0.381	5.5e-125
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.890	0.738	0.417	1.3e-124
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.884	0.726	0.399	2.8e-122
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.899	0.734	0.401	1.4e-120
TAIR\|locus:2142110		785	HAK5 "high affinity K+ transpo	0.847	0.699	0.404	2.2e-120
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.878	0.727	0.392	7.5e-120
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.851	0.693	0.413	1.4e-118
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.851	0.696	0.409	4.2e-117
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.865	0.678	0.388	6e-116
TAIR\|locus:2128399		775	TRH1 "TINY ROOT HAIR 1" [Arabi	0.856	0.716	0.373	1.7e-107

TAIR\|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 249/652 (38%), Positives = 389/652 (59%)

Query:     8 EDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFF-SAKNL 66
             +++  G++S +FWT TLI + KY  I L ADD GEGGTFALYSLL R   +    + + +
Sbjct:    62 DEEIFGVFSFIFWTFTLIALFKYVFIVLSADDNGEGGTFALYSLLCRYAKLSILPNHQEM 121

Query:    67 DSN-SIFHEGAENKSR----LGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLS 121
             D   S +  G+  ++R    +  FFEK   +++ LL   +LG CM IGD +LTP ISVLS
Sbjct:   122 DEKLSTYATGSPGETRQSAAVKSFFEKHPKSQKCLLLFVLLGTCMAIGDSVLTPTISVLS 181

Query:   122 AMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIY 181
             A+ G++   P++ ++ V  ++ IIL+ +F +Q++GT RV+F+F+PI  AW  S   +G+Y
Sbjct:   182 AVSGVKLKIPNLHENYVVIIACIILVAIFSVQRYGTHRVAFIFAPISTAWLLSISSIGVY 241

Query:   182 SIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQM 241
             + I   P I  ALSP Y + F    G EGW+ LGG VL ITG E +FADLGHF+  SI++
Sbjct:   242 NTIKWNPRIVSALSPVYMYKFLRSTGVEGWVSLGGVVLSITGVETMFADLGHFSSLSIKV 301

Query:   242 AFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLI 301
             AF F +YP L+L Y G+ A+L +H  D +  FYK IP+ V+WP+FI+AT AA+V SQ++I
Sbjct:   302 AFSFFVYPCLILAYMGEAAFLSKHHEDIQQSFYKAIPEPVFWPVFIVATFAAVVGSQAVI 361

Query:   302 SATFSVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGN 361
             SATFS+I Q   LD FPRVK++HTSS   G++Y PEVN++LM LC+AV +   +   +G+
Sbjct:   362 SATFSIISQCCALDCFPRVKIIHTSSKIHGQIYIPEVNWMLMCLCLAVTIGLRDTNMMGH 421

Query:   362 AFGXXXXXXXXXXXXXXXXXXXXXWRTPSLLVALYFLVFF-TMEGVYVSAVFTKIPEGGW 420
             A+G                     W+   ++  L F+VFF ++E +Y S+   K+PEGGW
Sbjct:   422 AYGLAVTSVMLVTTCLMTLVMTIVWKQ-RIITVLAFVVFFGSIELLYFSSCVYKVPEGGW 480

Query:   421 IPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIH 480
             IP  +S     +M+ W  G  KK E+++ +K+ ++R+ +L    G+ RVPG+   Y+N+ 
Sbjct:   481 IPILLSLTFMAVMYIWNYGTTKKHEFDVENKVSMDRIVSLGPSIGMVRVPGIGLVYSNL- 539

Query:   481 QDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLK--GVYGCVIQY 538
               G+  + GH++ N+ + HK+ VF  ++ + VP V  EER ++ ++G K  G++  V++Y
Sbjct:   540 VTGVPAVFGHFVTNLPAFHKILVFVCVKSVQVPYVGEEERFVISRVGPKEYGMFRSVVRY 599

Query:   539 GYADTLNLEGNDFVNQVTDCLREHIEKYLDCLPSNPVDIQ---EEISALEEAKLSDVIHV 595
             GY D    E  DF +++   + E +E            ++   EE   + EAK + V ++
Sbjct:   600 GYRDVPR-EMYDFESRLVSAIVEFVETEPGLEEEEMSSVRRKKEECMEIMEAKEAGVAYI 658

Query:   596 RGKTRFYIGKNCKRFDRIML-AFYEVLHSNCRSALPALSVPLSQRIEVGMLY 646
              G +     ++     ++ +   +  + +NCR     L+VP +  +EVGM+Y
Sbjct:   659 LGHSYAKAKQSSSVLKKLAVNVVFAFMSTNCRGTDVVLNVPHTSLLEVGMVY 710

GO:0005886 "plasma membrane" evidence=ISM

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;IGI;ISS

GO:0016020 "membrane" evidence=IEA;NAS

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IC

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22397	POT1_ARATH	No assigned EC number	0.3987	0.9814	0.8932	yes	no
A5EHA3	KUP1_BRASB	No assigned EC number	0.3204	0.8549	0.9067	yes	no
Q74AK4	KUP1_GEOSL	No assigned EC number	0.3317	0.8966	0.9207	yes	no
Q67UC7	HAK17_ORYSJ	No assigned EC number	0.7013	0.9907	0.9080	yes	no
Q7NUG7	KUP1_CHRVO	No assigned EC number	0.3208	0.8996	0.9109	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.X.6262.1	hypothetical protein (679 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.02100021	hypothetical protein (74 aa)	•	0.406

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		648
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	1e-166
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	1e-165
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-142
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	6e-99
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.002

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

 Score =  639 bits (1650), Expect = 0.0
 Identities = 222/537 (41%), Positives = 331/537 (61%), Gaps = 34/537 (6%)

Query: 6   PTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN 65
           PTE++ LG+ S++FWTLTLI  VKY  I L+AD+ GEGG FALY+L+ R +         
Sbjct: 32  PTEENVLGVLSLIFWTLTLIVTVKYVLIVLRADNNGEGGIFALYALIRRLL--------- 82

Query: 66  LDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDG 125
                                + S  A+ +LL + ++G  +L GDG++TPAISVLSA++G
Sbjct: 83  ---------------------KSSRKAKWLLLILGLIGAALLYGDGVITPAISVLSAVEG 121

Query: 126 IRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIH 185
           +    PS+   +V  ++ +IL+ LFL+Q+FGT ++  LF PIM  W  +  ++G+Y+II 
Sbjct: 122 LEVASPSLEPYVV-PITLVILVALFLIQRFGTGKIGKLFGPIMLIWFLTLGVLGLYNIIQ 180

Query: 186 HYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQMAFLF 245
           + P + KAL+P+Y   F  R GK G+ +LG   L +TG+EAL+AD+GHF R  I++A+ F
Sbjct: 181 N-PSVLKALNPYYAIRFLLRNGKAGFFVLGAVFLAVTGAEALYADMGHFGRRPIRLAWFF 239

Query: 246 TIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATF 305
            ++P+L+L Y GQ A L++HP    + F+  +P+ +YWP+ ++ATLA I+ASQ+LIS  F
Sbjct: 240 LVFPALLLNYLGQGALLLKHPEAISNPFFLLVPEWLYWPMVVLATLATIIASQALISGAF 299

Query: 306 SVIKQSVVLDYFPRVKVVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGV 365
           S+ +Q++ L Y PR+K+VHTS  +EG++Y P VN++LMI  +AV+L F    ++  A+G+
Sbjct: 300 SLTRQAIQLGYLPRLKIVHTSEKEEGQIYIPVVNWLLMIGVIAVVLGFRSSSNLAAAYGL 359

Query: 366 VVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFFTMEGVYVSAVFTKIPEGGWIPFAI 425
            V+  MLITTILL LV   +WR P +L  L+ L F  ++  + SA   KIP GGW P  I
Sbjct: 360 AVTGTMLITTILLFLVARRVWRWPLILALLFLLFFLVIDLAFFSANLLKIPHGGWFPLLI 419

Query: 426 SFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQDGLT 485
           +  L  IM  W  GR+         ++ L+    LL    + RVPG   F T+   DG+ 
Sbjct: 420 AAILFTIMLTWRRGRKLLYRRLKEDEVPLDDFLKLLERKDIPRVPGTAVFLTS-LPDGIP 478

Query: 486 PILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKGVYGCVIQYGYAD 542
           P L H +K+ + LH+  VF T+  L VPRV PEER  V +LG  G Y  +++YG+ +
Sbjct: 479 PALLHNLKHNKVLHERVVFLTIVTLDVPRVPPEERYEVERLG-PGFYRVILRYGFME 534

This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP), yeast (HAK), and plant (AtKT) sequences as members. Length = 534

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		648
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
PLN00148		785	potassium transporter; Provisional	100.0
PLN00151		852	potassium transporter; Provisional	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PLN00149		779	potassium transporter; Provisional	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	94.69
PF13520		426	AA_permease_2: Amino acid permease; PDB: 3NCY_A 3G	91.02
TIGR00909		429	2A0306 amino acid transporter.	88.35
COG0531		466	PotE Amino acid transporters [Amino acid transport	87.74
PRK15049		499	L-asparagine permease; Provisional	85.93
TIGR03813		474	put_Glu_GABA_T putative glutamate/gamma-aminobutyr	85.86
PRK10435		435	cadB lysine/cadaverine antiporter; Provisional	83.3
PRK10655		438	potE putrescine transporter; Provisional	82.86
TIGR00907		482	2A0304 amino acid permease (GABA permease).	82.53
PRK10746		461	putative transport protein YifK; Provisional	80.34

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.6e-210  Score=1759.88  Aligned_cols=642  Identities=42%  Similarity=0.798  Sum_probs=610.7

Q ss_pred             CCCcCcchhhhHHHHHHHHHHHhhheeeEEEEeCCCCCChHHHHHHHhhcccccCccCccc--cCCccccc-ccccchhh
Q 006371            5 SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKN--LDSNSIFH-EGAENKSR   81 (648)
Q Consensus         5 ~~~~~~i~G~lSlIfWtL~liv~iKYv~ivl~adn~GEGGi~aL~sL~~r~~~~~~~~~~~--~~~~~~~~-~~~~~~~~   81 (648)
                      .++++||+|+||||||||||++++|||+|||||||||||||||||||+||++|++..|+++  |++++++. ++..+.++
T Consensus        78 ~~~~~~ilGvLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~~~~r~~~  157 (779)
T PLN00150         78 VKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVDNMNRKTR  157 (779)
T ss_pred             CCCHHHhHhHHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccccchhhhH
Confidence            4789999999999999999999999999999999999999999999999999999999876  55667764 34444567


Q ss_pred             hhhhhhhchhHHHHHHHHHHhhhhhhhcCccccchhhHhhhhcccccCCCCCCCceeehhHHHHHHHHHHHhhccccccc
Q 006371           82 LGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIILIVLFLMQKFGTSRVS  161 (648)
Q Consensus        82 ~~~~l~~~~~~~~~l~~~~l~G~~l~~gDgviTPAiSVlSAveGl~~~~p~~~~~~vv~is~~Il~~LF~~Q~~GT~~ig  161 (648)
                      .|+++|+++..|++++++|++|+||++|||+||||||||||||||++..|++++++|+|+||+||++||++||+||+|||
T Consensus       158 ~k~~lE~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg  237 (779)
T PLN00150        158 IQRKLENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVS  237 (779)
T ss_pred             HHHhhhcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhh
Confidence            99999999988899999999999999999999999999999999999999998999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhcCchhhhhhcceeeeecchhhhhhccCCCCccchhh
Q 006371          162 FLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLLGGTVLCITGSEALFADLGHFNRSSIQM  241 (648)
Q Consensus       162 ~~FgPim~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~~~~~~~~LG~v~L~iTG~EALyADmGHfg~~~I~~  241 (648)
                      ++|||||++||++||++|+|||++|||+||+|+||+||++||.+||..||.+||+|+||+||+||||||||||||+|||+
T Consensus       238 ~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iri  317 (779)
T PLN00150        238 FLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQI  317 (779)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceee
Confidence            99999999999999999999999988999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhcchhhHhhcCCCcccccccccccccchHHHHHHHHHHHHHHHhHhhhhhhhHHHHHHhcCCCccce
Q 006371          242 AFLFTIYPSLVLTYAGQTAYLIRHPNDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSVIKQSVVLDYFPRVK  321 (648)
Q Consensus       242 sw~~~V~P~L~lnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtiIASQA~Isg~FSl~~Qai~L~~~Pr~~  321 (648)
                      ||+++|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+|
T Consensus       318 aw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvk  397 (779)
T PLN00150        318 AFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVK  397 (779)
T ss_pred             eehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCcccchhhHHHHHHHhheeeEEeCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Q 006371          322 VVHTSSNKEGEVYSPEVNYILMILCVAVILIFGEGKDIGNAFGVVVSLVMLITTILLTLVMIVIWRTPSLLVALYFLVFF  401 (648)
Q Consensus       322 i~hTS~~~~GQiYiP~vNw~L~i~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~  401 (648)
                      |+|||++++||||||+|||+||++|++++++||||++||+|||+||++||++||+|+++|++.+||||++++++|+++|+
T Consensus       398 I~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~  477 (779)
T PLN00150        398 IVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFA  477 (779)
T ss_pred             EEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccccCCcchHHHHHHHHHHhhhhhhHhHHHHHHHHHhcCCChhHHHhhcCCCCCcccCceEEEEeCCCC
Q 006371          402 TMEGVYVSAVFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVPGLCFFYTNIHQ  481 (648)
Q Consensus       402 ~id~~f~~an~~K~~~Ggw~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpg~avf~t~~~~  481 (648)
                      ++|+.||+||+.||+||||+|+++|++++++|++||+|++++++++.+++++++++.+...+.++.||||+|+|+|++ +
T Consensus       478 ~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~-~  556 (779)
T PLN00150        478 IIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDL-A  556 (779)
T ss_pred             HHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCC-C
Confidence            999999999999999999999999999999999999999999999999999999996666555578999999999999 9


Q ss_pred             CCccchhhhhhccCcccceEEEEEEEEeeecccCCCCccEEEEEecCCC--EEEEEEEEeeccccCCcccchHHHHHHHH
Q 006371          482 DGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKG--VYGCVIQYGYADTLNLEGNDFVNQVTDCL  559 (648)
Q Consensus       482 ~~vP~~l~h~l~~~~~lhe~vvfltI~~~~vP~V~~~~R~~V~~l~~~g--~yrv~lryGF~e~p~~~~~~f~~~iL~~L  559 (648)
                      +++|++|.||++|||++||++||+||+++|+|+|+++||++++++++++  +|||++||||||+. .++++|++++++++
T Consensus       557 ~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~-~d~~dFE~~LvesL  635 (779)
T PLN00150        557 HGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLE-KKDDNFEQLLIASL  635 (779)
T ss_pred             CCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCc-ccchHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999555  99999999999986 47899999999999


Q ss_pred             HHhhhhhccCC-------------CC-----C------------------------------------CcchHHHHHHHH
Q 006371          560 REHIEKYLDCL-------------PS-----N------------------------------------PVDIQEEISALE  585 (648)
Q Consensus       560 ~~~i~~d~~~~-------------~~-----~------------------------------------~~~~~~e~~~L~  585 (648)
                      +++++.|..+.             ++     +                                    .+..++|+++++
T Consensus       636 ~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~  715 (779)
T PLN00150        636 ERFIEIESFREQSDLESMAASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVSGHSSDTQDEVAFLN  715 (779)
T ss_pred             HHHHHhhhhcccccccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence            99987654210             00     0                                    001247888999


Q ss_pred             HhccCceEEEEEeEEEEecCCCchHHHHHHH-HHHHHHhhccCCCCcccCCCCCEEEEeEEEEC
Q 006371          586 EAKLSDVIHVRGKTRFYIGKNCKRFDRIMLA-FYEVLHSNCRSALPALSVPLSQRIEVGMLYEA  648 (648)
Q Consensus       586 ~a~~~~~~yflgre~L~~~~~s~~~kr~~i~-lF~~LkrNa~s~~~~f~LP~srVVEVG~~~ei  648 (648)
                      +|+++|++|++||++++++++++|+||+++| +|.|||||||++...+++|++|++||||.|++
T Consensus       716 ~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V  779 (779)
T PLN00150        716 KCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV  779 (779)
T ss_pred             HHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence            9999999999999999999999999999998 99999999999999999999999999999986

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A	Back alignment and domain information

>TIGR00909 2A0306 amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>PRK15049 L-asparagine permease; Provisional	Back alignment and domain information

>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter	Back alignment and domain information

>PRK10435 cadB lysine/cadaverine antiporter; Provisional	Back alignment and domain information

>PRK10655 potE putrescine transporter; Provisional	Back alignment and domain information

>TIGR00907 2A0304 amino acid permease (GABA permease)	Back alignment and domain information

>PRK10746 putative transport protein YifK; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		648
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 52.5 bits (125), Expect = 4e-07
 Identities = 61/496 (12%), Positives = 144/496 (29%), Gaps = 137/496 (27%)

Query: 207 GKEGWL----LLGGTVLCITGSEALFADLGHFNRSSIQMAFLFTIYPSLVLTYAGQTAYL 262
           GK  W+     L   V C    +  + +L + N     +  L  +   +   +  ++ + 
Sbjct: 162 GKT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 263 IRHP---NDHEDGFYKFIPKSVYWPIFIIATLAAIVASQSLISATFSV---IKQSVVLDY 316
                  +  +    + +    Y                 L+     V   ++ +   + 
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPY--------------ENCLL-----VLLNVQNAKAWNA 261

Query: 317 F-PRVKVVHTSSNKE-GEVYSPEVNYILMILCVAVILIFGEGKDI-GNAFGVVVSLVML- 372
           F    K++ T+  K+  +  S      + +   ++ L   E K +             L 
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ--DLP 319

Query: 373 ---ITTILLTLVMIVI-----------WRTPS-------LLVALYFLVFFTMEGVYVS-A 410
              +TT    L +I             W+  +       +  +L  L       ++   +
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 411 VFTKIPEGGWIPFAISFFLAFIMFGWFNGRQKKIEYELTHKIDLERLGTLLSDPGVQRVP 470
           VF   P    IP  +   L+ I   WF+  +  +   +     L +   +   P      
Sbjct: 380 VF---PPSAHIPTIL---LSLI---WFDVIKSDVMVVVNK---LHKYSLVEKQP----KE 423

Query: 471 GLCFFYTNIHQDGLTPILGHYIKNMRSLHKVTVFTTLRYLLVPRVAPEERIIVRKLGLKG 530
                  +I+ +    +     +N  +LH+                    I+        
Sbjct: 424 STISIP-SIYLELKVKL-----ENEYALHR-------------------SIVDH------ 452

Query: 531 VYGCVIQYGYADTLNLEGNDFVNQVTDC---------LR--EHIEKYLDCLPSNPVD--- 576
                    Y      + +D +    D          L+  EH E+         +D   
Sbjct: 453 ---------YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM-TLFRMVFLDFRF 502

Query: 577 IQEEI-----SALEEAKLSDVIHVRGKTRFYIGKNCKRFDRIMLAFYEVLHSNCRSALPA 631
           ++++I     +      + + +      + YI  N  +++R++ A  + L       L  
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP-KIEENL-- 559

Query: 632 LSVPLSQRIEVGMLYE 647
           +    +  + + ++ E
Sbjct: 560 ICSKYTDLLRIALMAE 575

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		648
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	97.11
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	96.74
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	96.09

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

Probab=97.11  E-value=0.02  Score=62.23  Aligned_cols=103  Identities=17%  Similarity=0.122  Sum_probs=56.0

Q ss_pred             eehhHHHHHHHHHHHhhccccccccchhhH----HHHHHHHHHHHHHHHhhccCcceeeecCHHHHHHHHhhc--Cchhh
Q 006371          138 VEALSAIILIVLFLMQKFGTSRVSFLFSPI----MGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRK--GKEGW  211 (648)
Q Consensus       138 vv~is~~Il~~LF~~Q~~GT~~ig~~FgPi----m~~WF~~l~~~G~~~i~~~~p~Vl~AlnP~ya~~f~~~~--~~~~~  211 (648)
                      ...+++++++++..+.-+|.+..+++..-.    +++-++.+.++|+..+...+|.-++ .|+    +.+..+  +..+|
T Consensus       130 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~  204 (511)
T 4djk_A          130 KTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIE-MDS----KTFFPDFSKVGTL  204 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC-----------------CCCCCTTSTTTT
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc-Ccc----cccCCCcccchHH
Confidence            456788888888999999998887754322    2223444556677665543332111 111    111111  12345


Q ss_pred             hhhcceeeeecchhhhhhccCCCC--ccchhhhHHH
Q 006371          212 LLLGGTVLCITGSEALFADLGHFN--RSSIQMAFLF  245 (648)
Q Consensus       212 ~~LG~v~L~iTG~EALyADmGHfg--~~~I~~sw~~  245 (648)
                      ..+..++.+.+|-|+.-.=-+-.-  +|++..+-..
T Consensus       205 ~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~~  240 (511)
T 4djk_A          205 VVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLL  240 (511)
T ss_dssp             TTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHHH
Confidence            667778899999998644333333  4566665553

PyMOL of 4djk

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00