Citrus Sinensis ID: 006373

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------65
MGNADYECPRRVSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCKSNPEVEYNSQDDNV
cccccccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccccccccccc
ccccccccccEccccccccHHHHHHHHHHHHccccccHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEEEEcHHHcccccccccEEEEEEcccEHHHcHHHHHHHHHHHHHccHHHHHccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccHHHHcccccEEEEHHHHHHHHHHHHcccccccccccccccccc
mgnadyecprrvsippskpffnSLKSglketlfpddpfrqfknQSASRKLLLGLQYFvpilewaprytfeffksdLLAGITIASLavpqgisyanlanlppilglyssfvppLVYAmmgsskdlAVGTVAVGSLLISSmlgkevnpnenpKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSqwrwesgvlgCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQlkkglnppslseldfgspylmtAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIagsctscyltagpfsrsavnfnagCKTAVSNIVMATAVMITLLFltplfhytplVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVarprtfvlgnipnsvtyrsidqypvaksvpgvlilhidapiyfANASYLRERISRWIYEEEEKLKISGETGLQYVILDmssvgsidtsgiSMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMlhtcksnpeveynsqddnv
mgnadyecprrvsippskpFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIgqlkkglnppSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARprtfvlgnipnsvtyrsidqypVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLllanprsevikklnnskFIENIGQEWIYLTVAEAVAACNFMLHtcksnpeveynsqddnv
MGNADYECPRRVSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVlgccfllflllTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCKSNPEVEYNSQDDNV
***********************************************RKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCK**************
*****************************ETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAAC**********************
********PRRVSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCKSNPEVEYNSQDDNV
******ECPRRVSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLH*****************
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MGNADYECPRRVSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCKSNPEVEYNSQDDNV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query648 2.2.26 [Sep-21-2011]
Q9SV13658 Sulfate transporter 3.1 O yes no 0.983 0.968 0.751 0.0
O04289646 Sulfate transporter 3.2 O no no 0.978 0.981 0.690 0.0
Q9SXS2631 Probable sulfate transpor no no 0.955 0.980 0.554 0.0
Q9LW86653 Probable sulfate transpor no no 0.962 0.955 0.540 0.0
Q94LW6634 Probable sulfate transpor no no 0.950 0.971 0.531 0.0
P53392662 High affinity sulfate tra N/A no 0.947 0.927 0.538 0.0
P53391667 High affinity sulfate tra N/A no 0.947 0.920 0.538 0.0
Q9SAY1649 Sulfate transporter 1.1 O no no 0.953 0.952 0.528 0.0
Q9FEP7656 Sulfate transporter 1.3 O no no 0.953 0.942 0.534 0.0
Q9MAX3653 Sulfate transporter 1.2 O no no 0.952 0.944 0.538 0.0
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function desciption
 Score = 1002 bits (2591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/648 (75%), Positives = 558/648 (86%), Gaps = 11/648 (1%)

Query: 1   MGNADYECP-------RR---VSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKL 50
           MG  DY  P       RR   V  P  +PF  SL+  +KETLFPDDPFRQFKNQ+ASRK 
Sbjct: 1   MGTEDYTFPQGAEELHRRHHTVEAPQPQPFLKSLQYSVKETLFPDDPFRQFKNQNASRKF 60

Query: 51  LLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFV 110
           +LGL+YF+PI EWAPRY  +FFKSDL+AGITIASLA+PQGISYA LANLPPILGLYSSFV
Sbjct: 61  VLGLKYFLPIFEWAPRYNLKFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFV 120

Query: 111 PPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQAS 170
           PPLVYA++GSS+DLAVGTVAV SLL  +ML KEV+  ++PKLY+ LA TATFFAGV +AS
Sbjct: 121 PPLVYAVLGSSRDLAVGTVAVASLLTGAMLSKEVDAEKDPKLYLHLAFTATFFAGVLEAS 180

Query: 171 LGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQT 230
           LG  RLGF+VDFLSHATIVGFMGGAATVV LQQLKGI GL  FT +TD+ SVMRSVFSQT
Sbjct: 181 LGIFRLGFIVDFLSHATIVGFMGGAATVVSLQQLKGIFGLKHFTDSTDVISVMRSVFSQT 240

Query: 231 SQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGV 290
            +WRWESGVLGC FL FLL TRYFS KK  FFW+ AMAPLTSVILGS+LVYFT AERHGV
Sbjct: 241 HEWRWESGVLGCGFLFFLLSTRYFSIKKPKFFWVAAMAPLTSVILGSLLVYFTHAERHGV 300

Query: 291 QVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDG 350
           QVIG LKKGLNP S S+L F SPY+ TAVKTG+I G+IALAEG+AVGRSFAMFKNY+IDG
Sbjct: 301 QVIGDLKKGLNPLSGSDLIFTSPYMSTAVKTGLITGIIALAEGVAVGRSFAMFKNYNIDG 360

Query: 351 NKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPL 410
           NKEM+AFGMMNI GS TSCYLT GPFSRSAVN+NAGCKTA+SNIVMA AVM TLLFLTPL
Sbjct: 361 NKEMIAFGMMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAMSNIVMAIAVMFTLLFLTPL 420

Query: 411 FHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAV 470
           FHYTPLVVLS+III+AMLGLIDY+A IHLWK+DKFDF+VCMSAYVGVVFGSVEIGLV+AV
Sbjct: 421 FHYTPLVVLSAIIISAMLGLIDYQAAIHLWKVDKFDFLVCMSAYVGVVFGSVEIGLVVAV 480

Query: 471 TISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYL 530
            IS+ R+LL V+RP+T V GNIPNS+ YR+ +QYP +++VPG+LIL IDAPIYFANASYL
Sbjct: 481 AISIARLLLFVSRPKTAVKGNIPNSMIYRNTEQYPSSRTVPGILILEIDAPIYFANASYL 540

Query: 531 RERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLL 590
           RERI RWI EEEE++K SGE+ LQY+ILDMS+VG+IDTSGISM  EIKKV+DRR LKL+L
Sbjct: 541 RERIIRWIDEEEERVKQSGESSLQYIILDMSAVGNIDTSGISMMVEIKKVIDRRALKLVL 600

Query: 591 ANPRSEVIKKLNNSKFI-ENIGQEWIYLTVAEAVAACNFMLHTCKSNP 637
           +NP+ EV+KKL  SKFI +++G+EW++LTV EAV AC++MLHT K+ P
Sbjct: 601 SNPKGEVVKKLTRSKFIGDHLGKEWMFLTVGEAVEACSYMLHTFKTEP 648
H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
Arabidopsis thaliana (taxid: 3702)
>sp|O04289|SUT32_ARATH Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2 Back     alignment and function description
>sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1 Back     alignment and function description
>sp|Q94LW6|SUT35_ARATH Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAX3|SUT12_ARATH Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query648
224107955653 sulfate/bicarbonate/oxalate exchanger an 1.0 0.992 0.852 0.0
224102103649 sulfate/bicarbonate/oxalate exchanger an 0.996 0.995 0.827 0.0
359479669654 PREDICTED: sulfate transporter 3.1-like 0.992 0.983 0.8 0.0
296085238652 unnamed protein product [Vitis vinifera] 0.992 0.986 0.8 0.0
194295554637 putative sulfate transporter [Populus tr 0.978 0.995 0.790 0.0
255552071606 sulfate transporter, putative [Ricinus c 0.922 0.986 0.792 0.0
297737097695 unnamed protein product [Vitis vinifera] 0.996 0.929 0.781 0.0
359477553654 PREDICTED: sulfate transporter 3.1-like 0.996 0.987 0.781 0.0
449518715646 PREDICTED: sulfate transporter 3.1-like 0.981 0.984 0.779 0.0
224085523655 sulfate/bicarbonate/oxalate exchanger an 1.0 0.989 0.777 0.0
>gi|224107955|ref|XP_002314667.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222863707|gb|EEF00838.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1143 bits (2957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/653 (85%), Positives = 599/653 (91%), Gaps = 5/653 (0%)

Query: 1   MGNADY-ECPRRVSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKLLLGLQYFVP 59
           MGN  Y ECP  V+IPP+KPF  S+KSG+KETLFPDDPFRQFKNQ ASRK +LGLQYFVP
Sbjct: 1   MGNDYYYECPHPVAIPPAKPFIESIKSGIKETLFPDDPFRQFKNQPASRKFILGLQYFVP 60

Query: 60  ILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMG 119
           +LEWAPRYTFEFFK+DL+AGITIASLAVPQGISYA+LANLPPILGLYSSFVPPLVYAM+G
Sbjct: 61  VLEWAPRYTFEFFKADLIAGITIASLAVPQGISYASLANLPPILGLYSSFVPPLVYAMLG 120

Query: 120 SSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGFV 179
           SSKDLAVGTVAV SLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQA+LGFLRLGF+
Sbjct: 121 SSKDLAVGTVAVASLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQAALGFLRLGFI 180

Query: 180 VDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGV 239
           VDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTH TDL SVMRSVFSQ  QWRWESGV
Sbjct: 181 VDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHGTDLVSVMRSVFSQAHQWRWESGV 240

Query: 240 LGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQLKKG 299
           LGCCFL FL+LTRY SK+K  FFWI+AMAPLTSVI+GSVL Y T AE++GVQVIG LKKG
Sbjct: 241 LGCCFLFFLILTRYVSKRKPGFFWISAMAPLTSVIVGSVLAYLTHAEQNGVQVIGHLKKG 300

Query: 300 LNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGM 359
           LNPPS+SEL FGSPYLMTA+KTG+I GVIALAEG+AVGRSFAMFKNYHIDGNKEM+AFGM
Sbjct: 301 LNPPSVSELAFGSPYLMTAIKTGIITGVIALAEGVAVGRSFAMFKNYHIDGNKEMIAFGM 360

Query: 360 MNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVL 419
           MNIAGSCTSCYLT GPFSR+AVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVL
Sbjct: 361 MNIAGSCTSCYLTTGPFSRTAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTPLVVL 420

Query: 420 SSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLL 479
           SSIIIAAMLGLIDYEA I LWK+DK DFIVCMSAY GVVFGSVEIGLVIAV ISLLR+L+
Sbjct: 421 SSIIIAAMLGLIDYEAAISLWKVDKCDFIVCMSAYFGVVFGSVEIGLVIAVAISLLRMLM 480

Query: 480 SVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIY 539
           SVARPRTF+LGNIPNS+ YRSIDQYP+A +VPGVLIL IDAP+YFANA+YLRERISRWIY
Sbjct: 481 SVARPRTFLLGNIPNSMIYRSIDQYPIANNVPGVLILQIDAPVYFANANYLRERISRWIY 540

Query: 540 EEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIK 599
           EEEEKLK +G + LQYVILD+S+VGSIDTSGISM EE+KK +DRR LKL+LANPRSEVIK
Sbjct: 541 EEEEKLKSTGGSSLQYVILDLSAVGSIDTSGISMLEEVKKNIDRRDLKLVLANPRSEVIK 600

Query: 600 KLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCKS--NPEVEYNSQD--DNV 648
           KL  SKF+E+IGQEWIYLTV EAVAACNFMLH  KS  NP  E    D  DNV
Sbjct: 601 KLEKSKFMESIGQEWIYLTVGEAVAACNFMLHRSKSSNNPATEKVELDAHDNV 653

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224102103|ref|XP_002312546.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222852366|gb|EEE89913.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359479669|ref|XP_003632327.1| PREDICTED: sulfate transporter 3.1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085238|emb|CBI28733.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|194295554|gb|ABB59577.2| putative sulfate transporter [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|255552071|ref|XP_002517080.1| sulfate transporter, putative [Ricinus communis] gi|223543715|gb|EEF45243.1| sulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297737097|emb|CBI26298.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477553|ref|XP_002283184.2| PREDICTED: sulfate transporter 3.1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449518715|ref|XP_004166382.1| PREDICTED: sulfate transporter 3.1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224085523|ref|XP_002307605.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222857054|gb|EEE94601.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query648
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.998 0.983 0.731 3.7e-254
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.976 0.979 0.677 1e-233
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.949 0.974 0.545 6.6e-184
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.945 0.938 0.539 9.7e-183
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.952 0.940 0.527 1.2e-177
TAIR|locus:2183139634 SULTR3;5 "sulfate transporter 0.953 0.974 0.525 1.2e-177
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.950 0.943 0.529 3.1e-177
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.953 0.952 0.518 8.6e-175
TAIR|locus:2184158677 SULTR2;1 "sulfate transporter 0.945 0.905 0.484 4e-154
TAIR|locus:2029496677 AST56 [Arabidopsis thaliana (t 0.936 0.896 0.474 1.4e-144
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2447 (866.4 bits), Expect = 3.7e-254, P = 3.7e-254
 Identities = 482/659 (73%), Positives = 555/659 (84%)

Query:     1 MGNADYECP-------RR---VSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQSASRKL 50
             MG  DY  P       RR   V  P  +PF  SL+  +KETLFPDDPFRQFKNQ+ASRK 
Sbjct:     1 MGTEDYTFPQGAEELHRRHHTVEAPQPQPFLKSLQYSVKETLFPDDPFRQFKNQNASRKF 60

Query:    51 LLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFV 110
             +LGL+YF+PI EWAPRY  +FFKSDL+AGITIASLA+PQGISYA LANLPPILGLYSSFV
Sbjct:    61 VLGLKYFLPIFEWAPRYNLKFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFV 120

Query:   111 PPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQAS 170
             PPLVYA++GSS+DLAVGTVAV SLL  +ML KEV+  ++PKLY+ LA TATFFAGV +AS
Sbjct:   121 PPLVYAVLGSSRDLAVGTVAVASLLTGAMLSKEVDAEKDPKLYLHLAFTATFFAGVLEAS 180

Query:   171 LGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQT 230
             LG  RLGF+VDFLSHATIVGFMGGAATVV LQQLKGI GL  FT +TD+ SVMRSVFSQT
Sbjct:   181 LGIFRLGFIVDFLSHATIVGFMGGAATVVSLQQLKGIFGLKHFTDSTDVISVMRSVFSQT 240

Query:   231 SQWRWESGVXXXXXXXXXXXTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGV 290
              +WRWESGV           TRYFS KK  FFW+ AMAPLTSVILGS+LVYFT AERHGV
Sbjct:   241 HEWRWESGVLGCGFLFFLLSTRYFSIKKPKFFWVAAMAPLTSVILGSLLVYFTHAERHGV 300

Query:   291 QVIGQLKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDG 350
             QVIG LKKGLNP S S+L F SPY+ TAVKTG+I G+IALAEG+AVGRSFAMFKNY+IDG
Sbjct:   301 QVIGDLKKGLNPLSGSDLIFTSPYMSTAVKTGLITGIIALAEGVAVGRSFAMFKNYNIDG 360

Query:   351 NKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPL 410
             NKEM+AFGMMNI GS TSCYLT GPFSRSAVN+NAGCKTA+SNIVMA AVM TLLFLTPL
Sbjct:   361 NKEMIAFGMMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAMSNIVMAIAVMFTLLFLTPL 420

Query:   411 FHYTPLVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAV 470
             FHYTPLVVLS+III+AMLGLIDY+A IHLWK+DKFDF+VCMSAYVGVVFGSVEIGLV+AV
Sbjct:   421 FHYTPLVVLSAIIISAMLGLIDYQAAIHLWKVDKFDFLVCMSAYVGVVFGSVEIGLVVAV 480

Query:   471 TISLLRVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYL 530
              IS+ R+LL V+RP+T V GNIPNS+ YR+ +QYP +++VPG+LIL IDAPIYFANASYL
Sbjct:   481 AISIARLLLFVSRPKTAVKGNIPNSMIYRNTEQYPSSRTVPGILILEIDAPIYFANASYL 540

Query:   531 RERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLL 590
             RERI RWI EEEE++K SGE+ LQY+ILDMS+VG+IDTSGISM  EIKKV+DRR LKL+L
Sbjct:   541 RERIIRWIDEEEERVKQSGESSLQYIILDMSAVGNIDTSGISMMVEIKKVIDRRALKLVL 600

Query:   591 ANPRSEVIKKLNNSKFI-ENIGQEWIYLTVAEAVAACNFMLHTCKSNPEVEYNSQDDNV 648
             +NP+ EV+KKL  SKFI +++G+EW++LTV EAV AC++MLHT K+ P  + N   +NV
Sbjct:   601 SNPKGEVVKKLTRSKFIGDHLGKEWMFLTVGEAVEACSYMLHTFKTEPASK-NEPWNNV 658
GO:0008272 "sulfate transport" evidence=ISS;IMP
GO:0015116 "sulfate transmembrane transporter activity" evidence=ISS;IMP
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183139 SULTR3;5 "sulfate transporter 3;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184158 SULTR2;1 "sulfate transporter 2;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029496 AST56 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P53391SUT1_STYHANo assigned EC number0.53880.94750.9205N/Ano
Q9SV13SUT31_ARATHNo assigned EC number0.75150.98300.9680yesno
P53392SUT2_STYHANo assigned EC number0.53890.94750.9274N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_X000302
sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (653 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query648
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 0.0
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 1e-106
COG0659554 COG0659, SUL1, Sulfate permease and related transp 1e-103
pfam1379283 pfam13792, Sulfate_tra_GLY, Sulfate transporter N- 3e-36
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 2e-29
pfam01740106 pfam01740, STAS, STAS domain 5e-29
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 2e-27
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 1e-07
COG1366117 COG1366, SpoIIAA, Anti-anti-sigma regulatory facto 1e-05
TIGR00377108 TIGR00377, ant_ant_sig, anti-anti-sigma factor 7e-04
cd06844100 cd06844, STAS, Sulphate Transporter and Anti-Sigma 8e-04
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  565 bits (1458), Expect = 0.0
 Identities = 252/567 (44%), Positives = 352/567 (62%), Gaps = 7/567 (1%)

Query: 59  PILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMM 118
           P+L W P Y  + FK DL+AG+T+  L +PQ ++YA LA L PI GLY+SFVPP +YA+ 
Sbjct: 1   PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALF 60

Query: 119 GSSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFLRLGF 178
           G+S+D+A+G VAV SLL+ S++ +           ++LA T T  AG+FQ  LG LRLGF
Sbjct: 61  GTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGF 120

Query: 179 VVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVMRSVFS---QTSQWRW 235
           +++FLSHA I GFM GAA  + L QLKG+LG+  F   TD   V+ S ++    T  W W
Sbjct: 121 LIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWNW 180

Query: 236 ESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVILGSVLVYFTDAERHGVQVIGQ 295
            + V+G   LLFLL T+   K+     +  A+APL  VIL ++ V     ++ GV ++G 
Sbjct: 181 CTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGH 240

Query: 296 LKKGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMV 355
           +  GL       +      L T     + I ++ L E IA+ RSFA    Y ID N+E+V
Sbjct: 241 IPSGL--SFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELV 298

Query: 356 AFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLFLTPLFHYTP 415
           A G+ NI GS  SCY   G  SR+AVN  AGC+T +S +V A  V++ LL LTPLF+Y P
Sbjct: 299 AQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIP 358

Query: 416 LVVLSSIIIAAMLGLIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLL 475
              L++III+A+ GLIDY+ +  LWK DK DF+V +  + GVVF S+EIGL++ V +S  
Sbjct: 359 QAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAA 418

Query: 476 RVLLSVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERIS 535
            +LL +ARPR  VLG +P +  YRSI QYP A+  PG+L+  +D P+YFANA  L++R+ 
Sbjct: 419 FLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRLL 478

Query: 536 RWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRS 595
           + I  E+E  +      LQ VILDMS+V  +DTSGI   EE++K +  RG++LLLANP  
Sbjct: 479 KRI--EDETRRELERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNK 536

Query: 596 EVIKKLNNSKFIENIGQEWIYLTVAEA 622
            V   L     +E IG+E  + +V++A
Sbjct: 537 AVRSTLKRGGLVELIGEEHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|205965 pfam13792, Sulfate_tra_GLY, Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>gnl|CDD|224285 COG1366, SpoIIAA, Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|129473 TIGR00377, ant_ant_sig, anti-anti-sigma factor Back     alignment and domain information
>gnl|CDD|132911 cd06844, STAS, Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 648
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
PRK10720428 uracil transporter; Provisional 100.0
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.97
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.97
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.97
PRK11412433 putative uracil/xanthine transporter; Provisional 99.96
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.96
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.95
PF1379284 Sulfate_tra_GLY: Sulfate transporter N-terminal do 99.91
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.9
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.73
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.66
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.65
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.64
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.57
TIGR00834900 ae anion exchange protein. They preferentially cat 99.56
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 99.53
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 99.51
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.51
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.4
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.4
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.24
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.09
COG3135402 BenE Uncharacterized protein involved in benzoate 99.05
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 99.05
PF1346680 STAS_2: STAS domain 98.91
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 98.04
COG311399 Predicted NTP binding protein (contains STAS domai 97.32
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 93.62
COG0659 554 SUL1 Sulfate permease and related transporters (MF 93.22
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 93.06
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 92.12
PF1421374 DUF4325: Domain of unknown function (DUF4325) 91.06
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 90.07
TIGR03173406 pbuX xanthine permease. All the seed members of th 90.06
PRK11412433 putative uracil/xanthine transporter; Provisional 89.86
PRK10720428 uracil transporter; Provisional 88.51
PRK11660 568 putative transporter; Provisional 85.58
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 82.87
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.6e-102  Score=875.29  Aligned_cols=621  Identities=38%  Similarity=0.661  Sum_probs=544.1

Q ss_pred             ecCCCCCchHHHHhhhcccccCCCCcchhhcccc--hhHHHHHHHhhhccccccCCCCCh-hhhhhhhhhHHHHHHhhhh
Q 006373           12 VSIPPSKPFFNSLKSGLKETLFPDDPFRQFKNQS--ASRKLLLGLQYFVPILEWAPRYTF-EFFKSDLLAGITIASLAVP   88 (648)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~wl~~y~~-~~l~~Di~aGltv~~~~iP   88 (648)
                      ++.|++++..+..+...++....+.+.++++++.  +++++.+.+++++|+++|+|+|++ +++.+|++||+|+|++++|
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~l~VP   96 (665)
T KOG0236|consen   17 VDTPTFDSSNEEEKSSVENTPTRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGSLSVP   96 (665)
T ss_pred             ccCCCCCcchhhhhccccCccccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeeeeecc
Confidence            3455555555544444444433445555555543  456788999999999999999999 6899999999999999999


Q ss_pred             hHHHHHHHhCCCcchhhHhhhhhhhhhhhccCCCccccchhhHHHHHHHHhhhcccCCCC---ChhHHHHHHHHHHHHHH
Q 006373           89 QGISYANLANLPPILGLYSSFVPPLVYAMMGSSKDLAVGTVAVGSLLISSMLGKEVNPNE---NPKLYVQLALTATFFAG  165 (648)
Q Consensus        89 q~~aya~laglpp~~gl~~~~~~~li~~~~Gss~~~~~Gp~a~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~G  165 (648)
                      |+||||.+||+||+||||++++|+++|++||+|||+++||++++|+|+++++++..+...   ++..+++++.+++|++|
T Consensus        97 Q~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l~G  176 (665)
T KOG0236|consen   97 QGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFLTG  176 (665)
T ss_pred             hHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999987775543222   45567899999999999


Q ss_pred             HHHHHHHhhhhhhHHhhchHhHHHHHHhhhHHHHHHhhhhhhhCcccccCCCchHHHH---HHHHhcCCCCchhhhHHHH
Q 006373          166 VFQASLGFLRLGFVVDFLSHATIVGFMGGAATVVCLQQLKGILGLVRFTHATDLQSVM---RSVFSQTSQWRWESGVLGC  242 (648)
Q Consensus       166 i~~~llg~~~lg~l~~~lp~~Vi~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~  242 (648)
                      ++|++||++|+|++++|+|+|++.||++|+|++++.+|+|.++|+++.+...+....+   .....+..+. +.++++++
T Consensus       177 iiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l  255 (665)
T KOG0236|consen  177 IIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKT-LATLVLSL  255 (665)
T ss_pred             HHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccccc-chhhhhHH
Confidence            9999999999999999999999999999999999999999999998554444443332   3334444433 77899999


Q ss_pred             HHHHHHHHHhhh-hcccccchhhccchhHHHHHHHHHHHHhccccC-CCeEEeecCCCCCCCCCCCcCCCChhhHHHHHH
Q 006373          243 CFLLFLLLTRYF-SKKKATFFWINAMAPLTSVILGSVLVYFTDAER-HGVQVIGQLKKGLNPPSLSELDFGSPYLMTAVK  320 (648)
Q Consensus       243 ~~l~~l~~~~~~-~~~~~~~~~~p~~~~Li~vvi~t~i~~~~~~~~-~~~~~~g~ip~g~p~p~~p~~~~~~~~~~~~~~  320 (648)
                      +++++++..|.+ .++.++.+|+|.|.++++++++|+++|.++.+. +.....+++|.|+|+|.+|.+++..    ..+.
T Consensus       256 ~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~----~~~~  331 (665)
T KOG0236|consen  256 IFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTP----QVIP  331 (665)
T ss_pred             HHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhH----HHHH
Confidence            999999999954 444455556999999999999999999998765 4566667999999999999887643    5666


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccCcccCCchHHHHHhhhhhhhhhcCCcccccccchhhHhhhcCCCchhHHHHHHHHH
Q 006373          321 TGVIIGVIALAEGIAVGRSFAMFKNYHIDGNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAV  400 (648)
Q Consensus       321 ~~~~~aiv~~~~~~~~~~~~~~~~~~~~~~n~el~a~GiaNi~~slfg~~p~~~s~srs~~~~~~G~~t~la~i~~a~i~  400 (648)
                      .++.++++++.++++++|+++++++|++|.||||+|+|++|++||||+|+|++++++||++|.++|+|||++++++++++
T Consensus       332 ~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~~v  411 (665)
T KOG0236|consen  332 DAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAALV  411 (665)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHHHHHH
Confidence            67788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhchhHHHHHHHHHHHhh-ccCHHHHHHHhccCccchhHHhhhhhhhhhccchhhHHHHHHHHHHHHHH
Q 006373          401 MITLLFLTPLFHYTPLVVLSSIIIAAMLG-LIDYEAVIHLWKLDKFDFIVCMSAYVGVVFGSVEIGLVIAVTISLLRVLL  479 (648)
Q Consensus       401 ll~~l~l~~ll~~iP~~vLa~ili~~~~~-li~~~~~~~l~~~~~~d~~i~~~t~~~~~~~~~~~Gl~~Gv~~sl~~~~~  479 (648)
                      ++++++++|+++++|+|+||++++.++.+ +.+.++++.+||.+|.|+.+|+.|++.+++.+++.|+++|+++|++.+++
T Consensus       412 l~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~~ii~  491 (665)
T KOG0236|consen  412 LLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLFFIIL  491 (665)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999 67999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeEeeeccCCcccccCCCCCCcccCCcEEEEEecCceEEechHHHHHHHH--HHHHHHHHH---hhhcCCCCce
Q 006373          480 SVARPRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERIS--RWIYEEEEK---LKISGETGLQ  554 (648)
Q Consensus       480 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~ivrl~g~L~F~na~~~~~~l~--~~i~~~~~~---~~~~~~~~~~  554 (648)
                      |.+||++..++++++++.|++.++|++.++.++++|+|+++|++|.|.+.+++++.  +++++.+..   .++...++.+
T Consensus       492 ~~~~p~~~~l~~~~~t~~~~~~~~y~~~~~~~gi~i~r~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  571 (665)
T KOG0236|consen  492 RSQRPRISLLGRIPRTNIYRDINQYRELKEIPGIKIFRISSPLLFGNVESFEKKLERLKYLRKEEVLENSARELHENSIH  571 (665)
T ss_pred             HhcCcchhhhcccCCCccccchhhcchhhccCceEEEEeccceeeccHHHHHHHHHHHHhhhhcccccCcccccccCcce
Confidence            99999999999999999999999999999999999999999999999999999883  444332111   1111222489


Q ss_pred             EEEEEecCCCccchHHHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHhCCCccccCCcceecCHHHHHHHHHHhhhcCC
Q 006373          555 YVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAACNFMLHTCK  634 (648)
Q Consensus       555 ~vILD~s~v~~IDssgl~~L~~l~~~~~~~gi~l~l~~~~~~v~~~l~~~g~~~~~~~~~if~s~~~Av~~~~~~l~~~~  634 (648)
                      ++|+||++++++|++|+.+|+++.+++++++++++++|+++++++.|.++++.+.++++++|.|++||++.|+..+....
T Consensus       572 ~vild~s~v~~iD~~g~~~L~~l~~~~~~~~i~~~~~n~~~~v~~~l~~~~~~~~~~~~~~f~tv~~av~~~~~~~~~~~  651 (665)
T KOG0236|consen  572 SVILDCSGVSFIDTSGASALKSLFKDLKTRGVQVLLANCPSSVREKLSKAGFFDFIGKDNLFLSVHDAVLDAVSELSRGT  651 (665)
T ss_pred             EEEEECCccchhhHHHHHHHHHHHHHHHhcCcEEEEeCCCHHHHHHHHhhccccccchhhhhccHHHHHHHHHHhhhccc
Confidence            99999999999999999999999999999999999999999999999999998999999999999999999999988666


Q ss_pred             CCC
Q 006373          635 SNP  637 (648)
Q Consensus       635 ~~~  637 (648)
                      +..
T Consensus       652 ~~~  654 (665)
T KOG0236|consen  652 DEE  654 (665)
T ss_pred             ccc
Confidence            533

>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query648
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 8e-14
2kln_A130 Solution Structure Of Stas Domain Of Rv1739c From M 8e-11
3oir_A135 Crystal Structure Of Sulfate Transporter Family Pro 4e-05
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure 
Iteration: 1

 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 484 PRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEE 543
           P   VLG +P++  Y  ID Y   K +PG+ I  I+APIY+AN+      + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKR------- 54
Query: 544 KLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNN 603
           K  ++G   +  VILD + V  +D+ G+     I K     G+ + LA   ++V+  L +
Sbjct: 55  KTGVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114
Query: 604 SKFIENIG-QEWIYLTVAEAV 623
           ++F EN   +E ++ ++ +AV
Sbjct: 115 NRFFENPALKELLFHSIHDAV 135
>pdb|2KLN|A Chain A, Solution Structure Of Stas Domain Of Rv1739c From M. Tuberculosis Length = 130 Back     alignment and structure
>pdb|3OIR|A Chain A, Crystal Structure Of Sulfate Transporter Family Protein From Wolinella Succinogenes Length = 135 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query648
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 6e-47
2kln_A130 Probable sulphate-transport transmembrane protein; 2e-45
4dgf_A135 Sulfate transporter sulfate transporter family PR; 4e-35
4dgh_A130 Sulfate permease family protein; STAS domain, anio 2e-34
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 2e-26
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 1e-08
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 2e-08
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 1e-07
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 5e-07
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 4e-04
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
 Score =  161 bits (409), Expect = 6e-47
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 8/144 (5%)

Query: 484 PRTFVLGNIPNSVTYRSIDQYPVAKSVPGVLILHIDAPIYFANASYLRERISRWIYEEEE 543
           P   VLG +P++  Y  ID Y   K +PG+ I  I+APIY+AN+      + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKT----- 56

Query: 544 KLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLLANPRSEVIKKLNN 603
              ++G   +  VILD + V  +D+ G+     I K     G+ + LA   ++V+  L +
Sbjct: 57  --GVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114

Query: 604 SKFIENIG-QEWIYLTVAEAVAAC 626
           ++F EN   +E ++ ++ +AV   
Sbjct: 115 NRFFENPALKELLFHSIHDAVLGS 138
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Length = 110 Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Length = 117 Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Length = 121 Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Length = 123 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query648
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 100.0
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.9
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.87
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.85
2kln_A130 Probable sulphate-transport transmembrane protein; 99.83
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.74
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.61
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.58
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.57
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.56
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.53
4hyl_A117 Stage II sporulation protein; structural genomics, 99.53
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.46
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.4
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 95.75
3bl4_A124 Uncharacterized protein; structural genomics, join 85.11
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 81.82
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=2.8e-33  Score=301.44  Aligned_cols=372  Identities=13%  Similarity=0.072  Sum_probs=278.0

Q ss_pred             hhcccchhHHHHHHHhhhccccccCCCCChhhhhhhhhhHHHHHHhhhhhHHHHHHHhCCCcchhhHhhhhhhhhhhhcc
Q 006373           40 QFKNQSASRKLLLGLQYFVPILEWAPRYTFEFFKSDLLAGITIASLAVPQGISYANLANLPPILGLYSSFVPPLVYAMMG  119 (648)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~p~~~wl~~y~~~~l~~Di~aGltv~~~~iPq~~aya~laglpp~~gl~~~~~~~li~~~~G  119 (648)
                      ..++.|.++.....+||++.|+                    .+++.+|..+      |+||..+++++.++++++++++
T Consensus         8 ~~~~~~~~~~i~~GlQh~lam~--------------------~~~v~~Plil------Gl~~~~~l~~agi~Tllq~~~~   61 (429)
T 3qe7_A            8 VSERPPLLQTIPLSLQHLFAMF--------------------GATVLVPVLF------HINPATVLLFNGIGTLLYLFIC   61 (429)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHH--------------------HHHHHHHHTT------TSCHHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCHHHHHHHHHHHHHHHH--------------------HHHHHhHHHh------CCCHHHHHHHHHHHHHHHHHHc
Confidence            3344466777888999999998                    8888999887      8999999999999999999984


Q ss_pred             -CCCccccchhhHHHHHHHHhhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHhh--hhh--hHHhhchHhHHHHHHhh
Q 006373          120 -SSKDLAVGTVAVGSLLISSMLGKEVNPNENPKLYVQLALTATFFAGVFQASLGFL--RLG--FVVDFLSHATIVGFMGG  194 (648)
Q Consensus       120 -ss~~~~~Gp~a~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gi~~~llg~~--~lg--~l~~~lp~~Vi~Gf~~g  194 (648)
                       ++.+...|++......+..+.. ++         ++.+.+.++++|++++++|++  |+|  ++.|++|+.|++.+++.
T Consensus        62 ~~~lP~~~G~sfafi~~~~~i~~-~g---------~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~  131 (429)
T 3qe7_A           62 KGKIPAYLGSSFAFISPVLLLLP-LG---------YEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAV  131 (429)
T ss_dssp             TTCCCCCEEECGGGHHHHHHHGG-GC---------HHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHH
T ss_pred             CCCCCeEecChHHHHHHHHHHHh-cC---------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHH
Confidence             5556668986554332233333 33         678899999999999999998  775  99999999999999999


Q ss_pred             hHHHHHHhhhhhhhCcccccCCCchHHHHHHHHhcCCCCchhhhHHHHHHHHHHHHHhhhhcccccchhhccchhHHHHH
Q 006373          195 AATVVCLQQLKGILGLVRFTHATDLQSVMRSVFSQTSQWRWESGVLGCCFLLFLLLTRYFSKKKATFFWINAMAPLTSVI  274 (648)
Q Consensus       195 igl~i~~~ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~~~~~~~~~~~~~~p~~~~Li~vv  274 (648)
                      +|+.+...++++..|... .  .             +..++.++.++++++++++++.++.|++.|.     ++.|++++
T Consensus       132 IGl~l~~~~~~~~~~~~~-~--~-------------~~~~~~~~~la~~tl~iii~~~~~~kg~~~~-----~aiLigiv  190 (429)
T 3qe7_A          132 IGLELAGVAAGMAGLLPA-E--G-------------QTPDSKTIIISITTLAVTVLGSVLFRGFLAI-----IPILIGVL  190 (429)
T ss_dssp             HHHHHHHHHHHHHTSSCB-T--T-------------BCCCHHHHHHHHHHHHHHHHHHHSSSTTTTT-----HHHHHHHH
T ss_pred             HHHHHHHHHHHhccccCC-C--C-------------ccccHHHHHHHHHHHHHHHHHHHHhcccchh-----hHHHHHHH
Confidence            999999999987543211 0  0             1256678899999999888887666665543     27899999


Q ss_pred             HHHHHHHhccccCCCeEEeecCC-CCCCCCCCCcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC----cccC
Q 006373          275 LGSVLVYFTDAERHGVQVIGQLK-KGLNPPSLSELDFGSPYLMTAVKTGVIIGVIALAEGIAVGRSFAMFKN----YHID  349 (648)
Q Consensus       275 i~t~i~~~~~~~~~~~~~~g~ip-~g~p~p~~p~~~~~~~~~~~~~~~~~~~aiv~~~~~~~~~~~~~~~~~----~~~~  349 (648)
                      +++++++.++..+  .+.+++.| -++|.+..|++  ++..+..+    +.++++++.|+++..++.++..+    ++.+
T Consensus       191 vg~~~a~~~G~~d--~~~v~~a~~~~lP~~~~P~f--~~~~i~~i----~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~  262 (429)
T 3qe7_A          191 VGYALSFAMGIVD--TTPIINAHWFALPTLYTPRF--EWFAILTI----LPAALVVIAEHVGHLVVTANIVKKDLLRDPG  262 (429)
T ss_dssp             HHHHHHHHHHHTT--SSHHHHSCSSCCCCCCCCCC--CHHHHHHH----THHHHHHHHHHHHHHHHHHHHHTSCTCCCCC
T ss_pred             HHHHHHHHhcCCC--cccccccccccccCCCCCcc--cHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999987532  22223333 24665666654  44444444    44566666677666666555444    4557


Q ss_pred             CchHHHHHhhhhhhhhhcCCcccccccchhhHhhhcCCCchhHHHHHHHHHHHHHHH--hhhhhhhchhHHHHHHHHHHH
Q 006373          350 GNKEMVAFGMMNIAGSCTSCYLTAGPFSRSAVNFNAGCKTAVSNIVMATAVMITLLF--LTPLFHYTPLVVLSSIIIAAM  427 (648)
Q Consensus       350 ~n~el~a~GiaNi~~slfg~~p~~~s~srs~~~~~~G~~t~la~i~~a~i~ll~~l~--l~~ll~~iP~~vLa~ili~~~  427 (648)
                      .|||+.++|++|+++|+||++|++++..|+++...+|++||++.+++|++++++.++  ++++++.||.+++||+.++ .
T Consensus       263 ~~r~l~adGla~i~~glfGg~p~Tt~~en~g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~-l  341 (429)
T 3qe7_A          263 LHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLL-L  341 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHH-H
T ss_pred             cchHHHHHHHHHHHHHhcCCCCcchHHHhHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH-H
Confidence            899999999999999999999999999999999999999999999999999888765  7889999999999998766 9


Q ss_pred             hhccCHHHHHHH--hccCccc-hhHHhhhhhhhhhcc---------chhhHHHHHHHHHHHH
Q 006373          428 LGLIDYEAVIHL--WKLDKFD-FIVCMSAYVGVVFGS---------VEIGLVIAVTISLLRV  477 (648)
Q Consensus       428 ~~li~~~~~~~l--~~~~~~d-~~i~~~t~~~~~~~~---------~~~Gl~~Gv~~sl~~~  477 (648)
                      ++++...+++.+  .|++..+ ....++++...+.+|         ...|+..|...++++.
T Consensus       342 fg~i~~~Gi~~l~~~~v~~~~~rn~~i~~~~l~~G~g~~~~~~~~~~~~gi~~~~~~ai~ln  403 (429)
T 3qe7_A          342 YGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLS  403 (429)
T ss_dssp             HHHHHHHHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHCCCCCSSSCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHHHH
Confidence            999999999988  7787654 344444433322222         2346666666666544
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 648
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 2e-16
d1vc1a_110 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 5e-15
d1h4xa_111 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 2e-11
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 73.0 bits (179), Expect = 2e-16
 Identities = 18/115 (15%), Positives = 47/115 (40%), Gaps = 13/115 (11%)

Query: 512 GVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGI 571
            VLI+ +   +    A  LRE+++  +              +++++L++  +  +D+SG+
Sbjct: 11  DVLIVRLSGELDHHTAEELREQVTDVLENR----------AIRHIVLNLGQLTFMDSSGL 60

Query: 572 SMFEEIKKVVDRRGLKLLLANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAAC 626
            +     K +   G ++++      V +  + S   + I    +      A+ A 
Sbjct: 61  GVILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKIIR---VEADEQFALQAL 112
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Length = 110 Back     information, alignment and structure
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query648
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.64
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.62
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.62
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus sphaericus [TaxId: 1421]

Probab=99.64  E-value=2.3e-16  Score=136.06  Aligned_cols=102  Identities=16%  Similarity=0.241  Sum_probs=94.1

Q ss_pred             CcEEEEEecCceEEechHHHHHHHHHHHHHHHHHhhhcCCCCceEEEEEecCCCccchHHHHHHHHHHHHHHHcCCEEEE
Q 006373          511 PGVLILHIDAPIYFANASYLRERISRWIYEEEEKLKISGETGLQYVILDMSSVGSIDTSGISMFEEIKKVVDRRGLKLLL  590 (648)
Q Consensus       511 ~~v~ivrl~g~L~F~na~~~~~~l~~~i~~~~~~~~~~~~~~~~~vILD~s~v~~IDssgl~~L~~l~~~~~~~gi~l~l  590 (648)
                      +++.++|++|+|+|+|+++|++++.+.+++.          +.+.+|+||++++++|+||+++|.++.++++++|+++.+
T Consensus         9 ~~~~vv~~~G~L~~~~a~~~~~~~~~~i~~~----------~~~~vvlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~l   78 (111)
T d1h4xa_           9 RETVVIRLFGELDHHAVEQIRAKISTAIFQG----------AVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTIL   78 (111)
T ss_dssp             TTEEEEEEEEEECHHHHHHHHHHHHHHHHHT----------SCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEEEEEEEEHHHHHHHHHHHHHHHhcC----------CCcEEEEEEECCcccCchHHHHHHHHHHHHHHCCCEEEE
Confidence            3678999999999999999999998876543          578999999999999999999999999999999999999


Q ss_pred             EcCCHHHHHHHHhCCCccccCCcceecCHHHHHHHH
Q 006373          591 ANPRSEVIKKLNNSKFIENIGQEWIYLTVAEAVAAC  626 (648)
Q Consensus       591 ~~~~~~v~~~l~~~g~~~~~~~~~if~s~~~Av~~~  626 (648)
                      +|+++++++.|+.+|+.+.+    .|.|.+||++..
T Consensus        79 ~~~~~~v~~~l~~~gl~~~~----~~~t~~eAl~~i  110 (111)
T d1h4xa_          79 LNPSPTMRKVFQFSGLGPWM----MDATEEEAIDRV  110 (111)
T ss_dssp             ESCCHHHHHHHHHTTCGGGE----ECSCHHHHHHHT
T ss_pred             ecCCHHHHHHHHHcCCCeEE----eeCCHHHHHHhc
Confidence            99999999999999997765    799999999864
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure