Citrus Sinensis ID: 006461
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 644 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C671 | 630 | Probable phosphatidylinos | no | no | 0.975 | 0.996 | 0.698 | 0.0 | |
| Q8TCG2 | 481 | Phosphatidylinositol 4-ki | yes | no | 0.357 | 0.478 | 0.279 | 2e-14 | |
| Q8CBQ5 | 469 | Phosphatidylinositol 4-ki | yes | no | 0.360 | 0.494 | 0.282 | 4e-14 | |
| Q5XIL2 | 477 | Phosphatidylinositol 4-ki | yes | no | 0.355 | 0.480 | 0.278 | 4e-14 | |
| Q505I0 | 471 | Phosphatidylinositol 4-ki | yes | no | 0.341 | 0.467 | 0.279 | 6e-11 | |
| Q08B31 | 469 | Phosphatidylinositol 4-ki | N/A | no | 0.341 | 0.469 | 0.276 | 1e-10 | |
| Q28G26 | 492 | Phosphatidylinositol 4-ki | no | no | 0.338 | 0.443 | 0.267 | 1e-10 | |
| Q6DCQ8 | 495 | Phosphatidylinositol 4-ki | N/A | no | 0.355 | 0.462 | 0.265 | 2e-10 | |
| Q5ZIK0 | 479 | Phosphatidylinositol 4-ki | yes | no | 0.329 | 0.442 | 0.260 | 3e-10 | |
| Q49GP5 | 501 | Phosphatidylinositol 4-ki | yes | no | 0.366 | 0.471 | 0.239 | 2e-09 |
| >sp|Q9C671|P4K2B_ARATH Probable phosphatidylinositol 4-kinase type 2-beta At1g26270 OS=Arabidopsis thaliana GN=At1g26270 PE=1 SV=1 | Back alignment and function desciption |
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Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/646 (69%), Positives = 531/646 (82%), Gaps = 18/646 (2%)
Query: 1 MSRKLDSPVQTQMAVAVFKTPLSGEYHGNKRVEGKQPAGRRRVFVQTETGCVLGMDLDRS 60
MSRKLDSP++TQMAVA+ K+PL+GE+ +V K P GRRRVFVQTETGCVLG++LDRS
Sbjct: 1 MSRKLDSPIKTQMAVALVKSPLNGEFREFNKVGMKTPVGRRRVFVQTETGCVLGLELDRS 60
Query: 61 DNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLSAVRNDSPLLLTRNYLHRSSSTPCLS 120
DNAHTVKR+LQ+ALN P +ESSLTFGD+VLKNDL+AVR+DSPLLLTRN HRSSSTPCLS
Sbjct: 61 DNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLTAVRSDSPLLLTRNNFHRSSSTPCLS 120
Query: 121 PRGNDIQQR-DRSGPIEILGQSDCFAITKKMVKDIVKAIKMGVDPIPVNGGLGGAYYFRN 179
P D+QQR D S PIEILG S F+ ++M KDI KA+K G+DP+ VN GLGGAYYF+N
Sbjct: 121 PMRADLQQRRDESSPIEILGNSVSFSFVRQMAKDITKAVKKGIDPVAVNSGLGGAYYFKN 180
Query: 180 SRFENVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGIREVAAYLLDHDHFA 239
SR E+VAIVKPTDEEP+APNNPKGFVGKALGQPGLKRSVRVGETG REVAAYLLD +HFA
Sbjct: 181 SRGESVAIVKPTDEEPYAPNNPKGFVGKALGQPGLKRSVRVGETGYREVAAYLLDKEHFA 240
Query: 240 NVPPTALVKIRHSIFNINDGVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPVSE 299
NVPPTALVKI HSIFN+NDGV K K LVSKIAS QQFI H++DAS+HGTS+FPVS
Sbjct: 241 NVPPTALVKITHSIFNVNDGVKASKPMEKMLVSKIASLQQFIPHDYDASEHGTSNFPVSA 300
Query: 300 VHHIGILDIRIFNTDRHAGNLLVRKLDGVGSFGQVELIPIDHGLCLPETLEDPYFEWIHW 359
VH IGILDIRI NTDRH+GNLLV+KLDG G FGQVEL+PIDHGLCLPETLEDPYFEWIHW
Sbjct: 301 VHRIGILDIRILNTDRHSGNLLVKKLDGDGMFGQVELVPIDHGLCLPETLEDPYFEWIHW 360
Query: 360 PQASIPFSDDELEYIRKLDPLSDCEMLRRELPMIREACLRVLVLCTIFLKEAAEFGLCLS 419
PQASIPFS+DEL+YI LDPL DCEMLRRELPM+REA LRVLVLCTIFLKEAA GLCL+
Sbjct: 361 PQASIPFSEDELKYIANLDPLGDCEMLRRELPMVREASLRVLVLCTIFLKEAAANGLCLA 420
Query: 420 EIGEMMSREFRAGEEEPSELEVVCIEARRLVEEREKEVLSPKADAG-DEDFLFDLDCEDA 478
EIGEMM+RE R G+EEPSE+EVVC+EA L+ E++ E SP++D G D +F FD+DCE+
Sbjct: 421 EIGEMMTREVRPGDEEPSEIEVVCLEAMSLIGEKDAE--SPRSDLGNDIEFQFDIDCEEV 478
Query: 479 AFDFTPKMAADDYMSRAQFHLGIGFGNGRFALSKLDESIEELEESEGEEEQEGFSTLPAP 538
D T K+A LG+ FGN R LSK++E+ E+ EE E E+ +E +
Sbjct: 479 T-DCTKKLA---------LPLGLTFGNARGQLSKVEETTEDGEEEEEEDREEEENDRADL 528
Query: 539 ERIPSISKLSMSLKTTCLGDKNQKYQKFSGSKPENGCLSNTSSGHRSANEQLPACVSFVK 598
E++P+I KLSMSLK+T LG+K+QKYQK G++ E+ + SS HRSA+EQ+P+ SFVK
Sbjct: 529 EKMPTI-KLSMSLKSTLLGEKSQKYQKHPGARVES---AYASSAHRSADEQIPSSTSFVK 584
Query: 599 LADLGEDEWTLFLEKFQELLYPAFAARKSVTVGLRQRQRLGTSCQF 644
L+D+ E+EWT+FLEK+QELLYPA RKS+T+G +QRQRLGTSCQF
Sbjct: 585 LSDMSEEEWTIFLEKYQELLYPAIEKRKSITLGQKQRQRLGTSCQF 630
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The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3). Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 6EC: 7 |
| >sp|Q8TCG2|P4K2B_HUMAN Phosphatidylinositol 4-kinase type 2-beta OS=Homo sapiens GN=PI4K2B PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8CBQ5|P4K2B_MOUSE Phosphatidylinositol 4-kinase type 2-beta OS=Mus musculus GN=Pi4k2b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5XIL2|P4K2B_RAT Phosphatidylinositol 4-kinase type 2-beta OS=Rattus norvegicus GN=Pi4k2b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q505I0|P4K2A_XENTR Phosphatidylinositol 4-kinase type 2-alpha OS=Xenopus tropicalis GN=pi4k2a PE=2 SV=2 | Back alignment and function description |
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| >sp|Q08B31|P4K2A_XENLA Phosphatidylinositol 4-kinase type 2-alpha OS=Xenopus laevis GN=pi4k2a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q28G26|P4K2B_XENTR Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus tropicalis GN=pi4k2b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6DCQ8|P4K2B_XENLA Phosphatidylinositol 4-kinase type 2-beta OS=Xenopus laevis GN=pi4k2b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5ZIK0|P4K2B_CHICK Phosphatidylinositol 4-kinase type 2-beta OS=Gallus gallus GN=PI4K2B PE=2 SV=1 | Back alignment and function description |
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| >sp|Q49GP5|P4K2B_DANRE Phosphatidylinositol 4-kinase type 2-beta OS=Danio rerio GN=pi4k2b PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 644 | ||||||
| 255547049 | 647 | inositol or phosphatidylinositol kinase, | 0.996 | 0.992 | 0.818 | 0.0 | |
| 224111846 | 640 | predicted protein [Populus trichocarpa] | 0.992 | 0.998 | 0.824 | 0.0 | |
| 225424995 | 640 | PREDICTED: probable phosphatidylinositol | 0.992 | 0.998 | 0.810 | 0.0 | |
| 301558003 | 641 | phosphatidylinositol 4-kinase [Gossypium | 0.993 | 0.998 | 0.801 | 0.0 | |
| 449458063 | 645 | PREDICTED: probable phosphatidylinositol | 0.995 | 0.993 | 0.768 | 0.0 | |
| 449434706 | 645 | PREDICTED: probable phosphatidylinositol | 0.996 | 0.995 | 0.741 | 0.0 | |
| 357516873 | 640 | Phosphatidylinositol kinase family-like | 0.992 | 0.998 | 0.734 | 0.0 | |
| 356499946 | 643 | PREDICTED: probable phosphatidylinositol | 0.986 | 0.987 | 0.756 | 0.0 | |
| 356495398 | 639 | PREDICTED: probable phosphatidylinositol | 0.984 | 0.992 | 0.753 | 0.0 | |
| 224099255 | 611 | predicted protein [Populus trichocarpa] | 0.942 | 0.993 | 0.792 | 0.0 |
| >gi|255547049|ref|XP_002514582.1| inositol or phosphatidylinositol kinase, putative [Ricinus communis] gi|223546186|gb|EEF47688.1| inositol or phosphatidylinositol kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/649 (81%), Positives = 576/649 (88%), Gaps = 7/649 (1%)
Query: 1 MSRKLDSPVQTQMAVAVFKTPLSGEYHGNKRVEGKQPAGRRRVFVQTETGCVLGMDLDRS 60
MSRKLDSPVQTQMAVAVFK+PLSGEYHG+++++GKQPAGRRRVFVQTETGCVLGM+LDR
Sbjct: 1 MSRKLDSPVQTQMAVAVFKSPLSGEYHGSRKMDGKQPAGRRRVFVQTETGCVLGMELDRG 60
Query: 61 DNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLSAVRNDSPLLLTRNYLHRSSSTPCLS 120
DNAHTVKRRLQLALNVPT++SSLTFGDMVL NDLSAVRNDSPLLLTRNYLHRSSSTPCLS
Sbjct: 61 DNAHTVKRRLQLALNVPTEQSSLTFGDMVLNNDLSAVRNDSPLLLTRNYLHRSSSTPCLS 120
Query: 121 PRGNDIQQRDRSGPIEILGQSDCFAITKKMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNS 180
P G DIQQRD+S IEILGQS+ FA K +VKD VKAIK GVDPIPV+ GLGGAYYFRNS
Sbjct: 121 PTGKDIQQRDQSALIEILGQSNSFAKMKHLVKDSVKAIKTGVDPIPVHSGLGGAYYFRNS 180
Query: 181 RFENVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGIREVAAYLLDHDHFAN 240
R E+VAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETG REVAAYLLD DHFAN
Sbjct: 181 RGESVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDCDHFAN 240
Query: 241 VPPTALVKIRHSIFNINDGVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPVSEV 300
VPPTALVKI HSIFNINDGVNG+K + K VSKIASFQQFI H+FDASDHGTSSFPVS V
Sbjct: 241 VPPTALVKITHSIFNINDGVNGNKPNKKKQVSKIASFQQFIPHDFDASDHGTSSFPVSAV 300
Query: 301 HHIGILDIRIFNTDRHAGNLLVRKLDGVGSFGQVELIPIDHGLCLPETLEDPYFEWIHWP 360
H IGILDIRIFNTDRHAGNLLVRKLD VG FGQVELIPIDHGLCLPETLEDPYFEWIHWP
Sbjct: 301 HRIGILDIRIFNTDRHAGNLLVRKLDRVGRFGQVELIPIDHGLCLPETLEDPYFEWIHWP 360
Query: 361 QASIPFSDDELEYIRKLDPLSDCEMLRRELPMIREACLRVLVLCTIFLKEAAEFGLCLSE 420
QASIPFSDDELEYI KLDP+ DC+MLRRELPMIREACLRVLVLCTIFLKEAA LCL+E
Sbjct: 361 QASIPFSDDELEYIEKLDPVRDCDMLRRELPMIREACLRVLVLCTIFLKEAAAASLCLAE 420
Query: 421 IGEMMSREFRAGEEEPSELEVVCIEARRLVEEREKEVLSPKADAGDEDFLFDLDCEDAAF 480
IGEMMSREFRAGEEEPSELEVVC++A+RL+ ER EVLSP+ D GD++F FD+DC + F
Sbjct: 421 IGEMMSREFRAGEEEPSELEVVCMDAKRLIAER--EVLSPRTDLGDDEFQFDIDCGEIDF 478
Query: 481 DFTPKMAADDYMSRAQFHLGIGFGNGRFALSKLDESIEELEESEGEEE-----QEGFSTL 535
DFTPKM +DYM + F G G GNGR LSKL+ESIEE +E E E+ + GFS L
Sbjct: 479 DFTPKMTTEDYMIKTPFQFGSGVGNGRSPLSKLEESIEEEDEDEEEDRDEEDGKGGFSVL 538
Query: 536 PAPERIPSISKLSMSLKTTCLGDKNQKYQKFSGSKPENGCLSNTSSGHRSANEQLPACVS 595
P PER+P++SKLSMSLK+T LG+K QK QKFSGSKPENG +NTSSGHRSANEQLPA VS
Sbjct: 539 PMPERLPTMSKLSMSLKSTSLGEKKQKCQKFSGSKPENGYYANTSSGHRSANEQLPASVS 598
Query: 596 FVKLADLGEDEWTLFLEKFQELLYPAFAARKSVTVGLRQRQRLGTSCQF 644
FV+LAD+ +DEWTLFLEKFQELLYPAF RKSVT+G RQRQRLGTSCQF
Sbjct: 599 FVELADMSDDEWTLFLEKFQELLYPAFNKRKSVTLGQRQRQRLGTSCQF 647
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111846|ref|XP_002316001.1| predicted protein [Populus trichocarpa] gi|222865041|gb|EEF02172.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225424995|ref|XP_002267025.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270 isoform 1 [Vitis vinifera] gi|147838249|emb|CAN76598.1| hypothetical protein VITISV_005885 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|301558003|gb|ADK78996.1| phosphatidylinositol 4-kinase [Gossypium barbadense] | Back alignment and taxonomy information |
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| >gi|449458063|ref|XP_004146767.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Cucumis sativus] gi|449523902|ref|XP_004168962.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449434706|ref|XP_004135137.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like isoform 1 [Cucumis sativus] gi|449434708|ref|XP_004135138.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357516873|ref|XP_003628725.1| Phosphatidylinositol kinase family-like protein [Medicago truncatula] gi|355522747|gb|AET03201.1| Phosphatidylinositol kinase family-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356499946|ref|XP_003518796.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356495398|ref|XP_003516565.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta At1g26270-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|224099255|ref|XP_002311415.1| predicted protein [Populus trichocarpa] gi|222851235|gb|EEE88782.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 644 | ||||||
| TAIR|locus:2056799 | 650 | PI4K GAMMA 7 "AT2G03890" [Arab | 0.981 | 0.972 | 0.667 | 7.2e-226 | |
| TAIR|locus:2028798 | 630 | AT1G26270 "AT1G26270" [Arabido | 0.976 | 0.998 | 0.663 | 8.5e-223 | |
| TAIR|locus:2023865 | 622 | AT1G13640 "AT1G13640" [Arabido | 0.697 | 0.721 | 0.762 | 7.2e-213 | |
| TAIR|locus:2102604 | 536 | AT3G56600 [Arabidopsis thalian | 0.501 | 0.602 | 0.528 | 1.1e-95 | |
| TAIR|locus:2058485 | 561 | PI4K GAMMA 1 "AT2G40850" [Arab | 0.509 | 0.584 | 0.498 | 1.3e-92 | |
| TAIR|locus:2169774 | 574 | AT5G24240 [Arabidopsis thalian | 0.425 | 0.477 | 0.435 | 6.9e-57 | |
| TAIR|locus:2039064 | 566 | PI4K GAMMA 4 "phosphoinositide | 0.434 | 0.494 | 0.396 | 3.3e-55 | |
| TAIR|locus:2019419 | 301 | AT1G64460 [Arabidopsis thalian | 0.374 | 0.800 | 0.442 | 2e-49 | |
| DICTYBASE|DDB_G0291370 | 401 | DDB_G0291370 "phosphatidylinos | 0.403 | 0.648 | 0.381 | 7.3e-43 | |
| UNIPROTKB|G5E9Z4 | 385 | PI4K2B "Phosphatidylinositol 4 | 0.173 | 0.290 | 0.290 | 4.3e-11 |
| TAIR|locus:2056799 PI4K GAMMA 7 "AT2G03890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2180 (772.5 bits), Expect = 7.2e-226, P = 7.2e-226
Identities = 442/662 (66%), Positives = 504/662 (76%)
Query: 1 MSRKLDSPVQTQMAVAVFKTPLSG-------EYHGNKRVEGKQPAGRRRVFVQTETGCVL 53
MSR LDSPVQTQMAVAVFKTPL+G ++H ++ ++ +Q +GRR VFVQTETGCVL
Sbjct: 1 MSRNLDSPVQTQMAVAVFKTPLTGASKMEGKQHHKHQHLQ-RQSSGRR-VFVQTETGCVL 58
Query: 54 GMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLSAVRNDSPLLLTRNYLHRS 113
GM+LDRSDN HTVKRRLQ+ALN PT+ESSLT+GDMVL NDLSAVRNDSPLLL RN++HRS
Sbjct: 59 GMELDRSDNVHTVKRRLQIALNFPTEESSLTYGDMVLTNDLSAVRNDSPLLLKRNFMHRS 118
Query: 114 SSTPCLSPRGNDIQQRDRSGPIEILGQSDCFAITKKMVKDIVKAIKMGVDPIPVNGGLGG 173
SSTPCLSP G D+QQ+DRSGPIEILG SDCF+I K MVKDIVKA+KMGV+P+PV+ GLGG
Sbjct: 119 SSTPCLSPTGRDLQQKDRSGPIEILGHSDCFSIVKHMVKDIVKAMKMGVEPLPVHSGLGG 178
Query: 174 AYYFRNSRFENVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGIREVAAYLL 233
AYYFRN R E+VAIVKPTDEEPFAPNNPKGFVGKALGQPGLK SVRVGETG REVAAYLL
Sbjct: 179 AYYFRNKRGESVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKSSVRVGETGFREVAAYLL 238
Query: 234 DHDHFANVPPTALVKIRHSIFNINDGVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTS 293
D+ FANVPPTALVKI HS+FN+NDGV G+K K LVSKIASFQ+F+ H+FDASDHGTS
Sbjct: 239 DYGRFANVPPTALVKITHSVFNVNDGVKGNKPREKKLVSKIASFQKFVAHDFDASDHGTS 298
Query: 294 SFPVSEVHHIGILDIRIFNTDRHAGNLLVRKLDGVGSFGQVELIPIDHGLCLPETLEDPY 353
SFPV+ VH IGILDIRIFNTDRH GNLLV+KLDGVG FGQVELIPIDHGLCLPETLEDPY
Sbjct: 299 SFPVTSVHRIGILDIRIFNTDRHGGNLLVKKLDGVGMFGQVELIPIDHGLCLPETLEDPY 358
Query: 354 FEWIHWPQASIPFSDDELEYIRKLDPLSDCEMLRRELPMIREACLRVLVLCTIFLKEAAE 413
FEWIHWPQAS+PFSD+E++YI+ LDP+ DC+MLRRELPMIREACLRVLVLCTIFLKEA+
Sbjct: 359 FEWIHWPQASLPFSDEEVDYIQSLDPVKDCDMLRRELPMIREACLRVLVLCTIFLKEASA 418
Query: 414 FGLCLSEIGEMMSREFRAGEEEPSELEVVCIXXXXXXXXXXXXXXSPKADA-GXXXXXXX 472
+GLCL+EIGEMM+REFR GEEEPSELEVVCI SP++D G
Sbjct: 419 YGLCLAEIGEMMTREFRPGEEEPSELEVVCIEAKRSVTERDVF--SPRSDVVGEAEFQFD 476
Query: 473 XXXXXXXXXXTPKMA-ADDYMSRAQFHLGIGFGNGRFAXXXXXXXXXXXXXXXXXXXXXG 531
+ K+ DDY ++ F G G+
Sbjct: 477 LDCDDLESVYSSKIQLTDDYFTKNPFSNGRS-SLGKLEESIKEEEEDEEEEEDKTENTVP 535
Query: 532 --------FSTLPAPERIPSISKLSMSLKTTCLGDKNQKYQKFSGSKP-ENGCLSNTSSG 582
FS+ ++ PS+SKLS S+K T L D +K KP G NTSSG
Sbjct: 536 MIIMKDSFFSSAAFHDKAPSLSKLSTSMKNTHLSDTTRK-----NPKPLTRGKSENTSSG 590
Query: 583 HRSANEQLPACVSFVKLADLGEDEWTLFLEKFQELLYPAFAARKSVTVGLRQRQRLGTSC 642
H+SANEQLP SFVK+AD+ EDEW LFLE+FQELL PAFA RK+ T L +RQRLGTSC
Sbjct: 591 HKSANEQLPVSASFVKVADMKEDEWVLFLERFQELLGPAFAKRKTAT--LSKRQRLGTSC 648
Query: 643 QF 644
QF
Sbjct: 649 QF 650
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| TAIR|locus:2028798 AT1G26270 "AT1G26270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2023865 AT1G13640 "AT1G13640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2102604 AT3G56600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2058485 PI4K GAMMA 1 "AT2G40850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2169774 AT5G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2039064 PI4K GAMMA 4 "phosphoinositide 4-kinase gamma 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2019419 AT1G64460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0291370 DDB_G0291370 "phosphatidylinositol 3-kinase-related protein kinase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G5E9Z4 PI4K2B "Phosphatidylinositol 4-kinase type 2 beta" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.1.67 | LOW CONFIDENCE prediction! |
| 3rd Layer | 2.7.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 644 | |||
| pfam00454 | 233 | pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- | 9e-44 |
| >gnl|CDD|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase | Back alignment and domain information |
|---|
Score = 156 bits (396), Expect = 9e-44
Identities = 65/236 (27%), Positives = 84/236 (35%), Gaps = 45/236 (19%)
Query: 213 GLKRSVRVGETGIREVAAYLLDH--------------DHFANVPPTALVKIRHSIFNIND 258
GL + GE R +AAYL+ A +P T +VK +FN +
Sbjct: 23 GLMNKLLSGEGLDRRLAAYLVIPLGPGSGLIEWVPNSTTLAEIPRTYMVKKGIPLFNYSR 82
Query: 259 GVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTS-SFPVSEVHHIGILDIRIFNTDRHA 317
V L K+ Q F+KH DA + G + V + +LD + N DRH
Sbjct: 83 KVLV-FESRTALFPKVGLLQWFVKHFPDAEEWGEARKNFVRSCAGMSVLDYILGNGDRHL 141
Query: 318 GNLLVRKLDGVGSFGQVELIPIDHGLCLP-----ETLEDPYFEWIHWPQASIPFSDDELE 372
N+LV K G +L ID GLC P E F PF +
Sbjct: 142 DNILVDKTTG-------KLFHIDFGLCFPKAKRGPKPERVPFRLTR------PFVEAMGG 188
Query: 373 YIRKLDPLSDCEMLRRELPMIREACLRVLVLCTIFLKEAAEFGLCLSEIGEMMSRE 428
Y DP D + R EA R L L T L L + E G R
Sbjct: 189 Y----DPSGDEGLFRELCETAYEALRRNLNLLTNLL-------LLMVEDGLPDWRS 233
|
Some members of this family probably do not have lipid kinase activity and are protein kinases, . Length = 233 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 644 | |||
| KOG2381 | 286 | consensus Phosphatidylinositol 4-kinase [Signal tr | 100.0 | |
| TIGR03843 | 253 | conserved hypothetical protein. This model represe | 100.0 | |
| cd01807 | 74 | GDX_N ubiquitin-like domain of GDX. GDX contains a | 99.62 | |
| KOG0005 | 70 | consensus Ubiquitin-like protein [Cell cycle contr | 99.6 | |
| cd01793 | 74 | Fubi Fubi ubiquitin-like protein. Fubi is a ubiqui | 99.58 | |
| cd01802 | 103 | AN1_N ubiquitin-like domain of AN1. AN1 (also know | 99.58 | |
| cd01797 | 78 | NIRF_N amino-terminal ubiquitin-like domain of Np9 | 99.57 | |
| cd01798 | 70 | parkin_N amino-terminal ubiquitin-like of parkin p | 99.56 | |
| PTZ00044 | 76 | ubiquitin; Provisional | 99.56 | |
| cd01810 | 74 | ISG15_repeat2 ISG15 ubiquitin-like protein, second | 99.52 | |
| cd01791 | 73 | Ubl5 UBL5 ubiquitin-like modifier. UBL5 (also know | 99.5 | |
| cd01794 | 70 | DC_UbP_C dendritic cell derived ubiquitin-like pro | 99.49 | |
| KOG0003 | 128 | consensus Ubiquitin/60s ribosomal protein L40 fusi | 99.49 | |
| cd01806 | 76 | Nedd8 Nebb8-like ubiquitin protein. Nedd8 (also kn | 99.48 | |
| cd01805 | 77 | RAD23_N Ubiquitin-like domain of RAD23. RAD23 belo | 99.47 | |
| cd01809 | 72 | Scythe_N Ubiquitin-like domain of Scythe protein. | 99.47 | |
| KOG0004 | 156 | consensus Ubiquitin/40S ribosomal protein S27a fus | 99.47 | |
| cd01803 | 76 | Ubiquitin Ubiquitin. Ubiquitin (includes Ubq/RPL40 | 99.47 | |
| cd01804 | 78 | midnolin_N Ubiquitin-like domain of midnolin. midn | 99.44 | |
| cd01796 | 71 | DDI1_N DNA damage inducible protein 1 ubiquitin-li | 99.43 | |
| cd01808 | 71 | hPLIC_N Ubiquitin-like domain of hPLIC-1 and hPLIC | 99.41 | |
| cd01792 | 80 | ISG15_repeat1 ISG15 ubiquitin-like protein, first | 99.4 | |
| cd01790 | 79 | Herp_N Homocysteine-responsive endoplasmic reticul | 99.34 | |
| PF00240 | 69 | ubiquitin: Ubiquitin family; InterPro: IPR000626 U | 99.27 | |
| cd01812 | 71 | BAG1_N Ubiquitin-like domain of BAG1. BAG1_N N-ter | 99.26 | |
| cd01763 | 87 | Sumo Small ubiquitin-related modifier (SUMO). Smal | 99.26 | |
| cd01800 | 76 | SF3a120_C Ubiquitin-like domain of Mammalian splic | 99.17 | |
| TIGR00601 | 378 | rad23 UV excision repair protein Rad23. All protei | 99.09 | |
| PF00454 | 235 | PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina | 99.07 | |
| smart00213 | 64 | UBQ Ubiquitin homologues. Ubiquitin-mediated prote | 99.06 | |
| cd01813 | 74 | UBP_N UBP ubiquitin processing protease. The UBP ( | 99.03 | |
| cd01815 | 75 | BMSC_UbP_N Ubiquitin-like domain of BMSC-UbP. BMSC | 99.02 | |
| cd01799 | 75 | Hoil1_N Ubiquitin-like domain of HOIL1. HOIL1_N HO | 99.01 | |
| KOG0010 | 493 | consensus Ubiquitin-like protein [Posttranslationa | 98.95 | |
| cd01769 | 69 | UBL Ubiquitin-like domain of UBL. UBLs function by | 98.77 | |
| KOG0001 | 75 | consensus Ubiquitin and ubiquitin-like proteins [P | 98.73 | |
| PF11976 | 72 | Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; Inter | 98.67 | |
| cd01814 | 113 | NTGP5 Ubiquitin-like NTGP5 and ATGP4. NTGP5 and AT | 98.65 | |
| cd01795 | 107 | USP48_C USP ubiquitin-specific protease. The USP ( | 98.41 | |
| KOG0011 | 340 | consensus Nucleotide excision repair factor NEF2, | 98.39 | |
| KOG4248 | 1143 | consensus Ubiquitin-like protein, regulator of apo | 98.21 | |
| cd01789 | 84 | Alp11_N Ubiquitin-like domain of Alp11 tubulin-fol | 98.18 | |
| PLN02560 | 308 | enoyl-CoA reductase | 98.17 | |
| cd00196 | 69 | UBQ Ubiquitin-like proteins. Ubiquitin homologs; I | 97.68 | |
| KOG3829 | 486 | consensus Uncharacterized conserved protein [Funct | 97.62 | |
| PF14560 | 87 | Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2K | 97.47 | |
| PF13881 | 111 | Rad60-SLD_2: Ubiquitin-2 like Rad60 SUMO-like; PDB | 97.25 | |
| cd01788 | 119 | ElonginB Ubiquitin-like domain of Elongin B. Elong | 97.21 | |
| cd01801 | 77 | Tsc13_N Ubiquitin-like domain of Tsc13. Tsc13_N N- | 97.18 | |
| KOG0006 | 446 | consensus E3 ubiquitin-protein ligase (Parkin prot | 96.6 | |
| PF11543 | 80 | UN_NPL4: Nuclear pore localisation protein NPL4; I | 96.24 | |
| cd01811 | 80 | OASL_repeat1 2'-5' oligoadenylate synthetase-like | 95.84 | |
| PF07804 | 79 | HipA_C: HipA-like C-terminal domain; InterPro: IPR | 95.72 | |
| KOG1872 | 473 | consensus Ubiquitin-specific protease [Posttransla | 95.12 | |
| PF06702 | 221 | DUF1193: Protein of unknown function (DUF1193); In | 93.97 | |
| KOG1769 | 99 | consensus Ubiquitin-like proteins [Posttranslation | 93.0 | |
| cd05168 | 293 | PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T | 92.43 | |
| PF11470 | 65 | TUG-UBL1: GLUT4 regulating protein TUG; InterPro: | 92.0 | |
| cd00893 | 289 | PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I | 91.92 | |
| cd00895 | 354 | PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl | 91.78 | |
| PF13019 | 162 | Telomere_Sde2: Telomere stability and silencing | 91.19 | |
| PF10302 | 97 | DUF2407: DUF2407 ubiquitin-like domain; InterPro: | 90.99 | |
| cd05167 | 311 | PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), | 90.7 | |
| KOG4495 | 110 | consensus RNA polymerase II transcription elongati | 89.82 | |
| KOG4583 | 391 | consensus Membrane-associated ER protein involved | 89.06 | |
| cd05177 | 354 | PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c | 88.89 | |
| KOG0903 | 847 | consensus Phosphatidylinositol 4-kinase, involved | 87.58 | |
| cd05166 | 353 | PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I | 86.83 | |
| cd00894 | 365 | PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c | 84.44 | |
| cd05165 | 366 | PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, | 83.33 | |
| cd05175 | 366 | PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c | 83.26 | |
| cd05174 | 361 | PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c | 83.24 | |
| cd00891 | 352 | PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic | 82.77 | |
| cd05176 | 353 | PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c | 82.61 | |
| cd05173 | 362 | PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl | 81.54 | |
| COG5227 | 103 | SMT3 Ubiquitin-like protein (sentrin) [Posttransla | 80.93 | |
| cd00896 | 350 | PI3Kc_III Phosphoinositide 3-kinase (PI3K), class | 80.92 | |
| PF00789 | 82 | UBX: UBX domain; InterPro: IPR001012 The UBX domai | 80.61 | |
| KOG0013 | 231 | consensus Uncharacterized conserved protein [Funct | 80.08 |
| >KOG2381 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-69 Score=552.11 Aligned_cols=283 Identities=48% Similarity=0.741 Sum_probs=260.0
Q ss_pred HHHHHHHHcCCCCccccCccCeEEEEEeCCCceEEEEecCCCCCCCCCCCCcccccccCCCCCCCccccCCcchh-hhhh
Q 006461 152 KDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGIR-EVAA 230 (644)
Q Consensus 152 ~~v~~ai~~Gi~P~~i~~GSgGSYf~~n~~Gk~vaVFKP~DEEP~a~nNPk~f~~r~~g~~g~krG~lvge~a~R-EVAA 230 (644)
.++..|++.|+.|.++..|++|+||+++..|..+|||||+|||||++|||+|......|+||+++||++||+|+| |+||
T Consensus 2 ~~~~~a~~~g~~p~~~~~g~~gayf~~~~~~~~~~v~kP~deEp~~~~Npk~~~~~~~g~~~~~~~~~v~~~g~~~E~aa 81 (286)
T KOG2381|consen 2 REAIEAIEKGIFPELLPLGSGGAYFMQDTSGWIVGVFKPKDEEPYARNNPKGTKVLQRGQCGCKRSCLVGNSGYRSEAAA 81 (286)
T ss_pred chHHHHhhcCCCcccccCCCchhHHHhccccceeeccCCCcccccccCCCccCchhhccccccccceeccCccccchhhh
Confidence 578899999999999999999999999999988999999999999999999977777888899999999999997 9999
Q ss_pred hhhcCCCCCCCCCceEEEeeccccccCCCCCCcccCCCCCCCccceeeeccccCcccCCCCCCCCCcccccccceeeeEe
Q 006461 231 YLLDHDHFANVPPTALVKIRHSIFNINDGVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPVSEVHHIGILDIRI 310 (644)
Q Consensus 231 YLLD~~gf~~VP~T~lV~l~hp~Fn~~~~~~~~~~~~~~~p~KiGSlQ~FV~~d~~a~d~g~~~Fpv~evhKIaILDiri 310 (644)
|||||++|+.||+|.+|+++|++||+++....+.... ..|+||+|+||++ +++.|+++..|+++++|||+||||||
T Consensus 82 yLlD~~~~~~Vp~t~~v~i~~~~f~~~~~~~~~~~~~---~~k~gs~q~Fve~-~~~~d~~~~~F~~~e~hkivvlD~ri 157 (286)
T KOG2381|consen 82 YLLDHPEFNDVPRTALVKITHFTFNYNAAFLSKRQGK---KSKIGSLQLFVEG-YSAADYGLRRFEAEEVHKIVVLDIRI 157 (286)
T ss_pred hccCccccCCCCceeeEEEeeecccccccceeccccc---ccchhhHHHhhcC-ccccceeEEeccccccceeEEEEEEe
Confidence 9999999999999999999999999998765432211 2899999999999 88999999999999999999999999
Q ss_pred ecCCCCCCceEEeeeCCCCCCCceEEEeecCcccCCCcCCCCCccccccCCCCCCCCHHHHHHHHcCChhhhHHHHHhhC
Q 006461 311 FNTDRHAGNLLVRKLDGVGSFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSDDELEYIRKLDPLSDCEMLRREL 390 (644)
Q Consensus 311 ~NtDRh~GNiLV~~~~~~g~~g~~~L~pIDHGlcfP~~~~d~~f~Wl~WPqA~~PFS~e~leyI~~LD~~~D~~~Lr~~l 390 (644)
+|||||+|||||++.+.. ..-...+|||||||++|+|+||+|++||||++|||+++++|| ||+..|+++||
T Consensus 158 ~NtDRh~~N~lvk~~~~~----~~~~~~~Dhgl~fP~~~~d~~f~W~~~pqa~~pfs~~~~~yi--L~~~~d~~~~r--- 228 (286)
T KOG2381|consen 158 RNTDRHAGNWLVKKEPTL----EQAAILGDHGLCFPEKHPDEWFEWLYWPQAKIPFSEEIVDYI--LDPLTDCNLLR--- 228 (286)
T ss_pred eccCCCCCceeEEeccCc----ccccccccCceeCcccCCccccchHHHHhhcccccHHHHhcc--CCcccCHHHHH---
Confidence 999999999999996532 233455599999999999999999999999999999999999 99999999999
Q ss_pred CcchHHHHHHHHHhHHHHHHHHHcCCCHHHHHHhHhhccccCCCCCChHHHHHHHHHHHHHH
Q 006461 391 PMIREACLRVLVLCTIFLKEAAEFGLCLSEIGEMMSREFRAGEEEPSELEVVCIEARRLVEE 452 (644)
Q Consensus 391 ~~ir~~clr~l~i~T~~Lk~~a~~gLtl~eIg~~m~R~~~~~~e~pS~lE~~~~~A~~~~~~ 452 (644)
++.+.|+|+++++|+|+|++++.|||+.+||.+|+|++..+ |.+|.+|.+|.+.+++
T Consensus 229 -~l~~~~~~~~~~~~~f~k~~~~~~l~~~~~g~~~~re~~~~----~~~~~~~~~~~~~~~~ 285 (286)
T KOG2381|consen 229 -ELPEDLLRLFKVDTGFLKKAFEKQLSVMRIGILNLREALKD----SKLEQLCVEAKASVVE 285 (286)
T ss_pred -HhHHHHHHHHhhchhhhHHHHHhCchHhhccceehHHHHhh----CccHHHHHhhhhcccC
Confidence 45799999999999999999999999999999999999754 9999999999876653
|
|
| >TIGR03843 conserved hypothetical protein | Back alignment and domain information |
|---|
| >cd01807 GDX_N ubiquitin-like domain of GDX | Back alignment and domain information |
|---|
| >KOG0005 consensus Ubiquitin-like protein [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01793 Fubi Fubi ubiquitin-like protein | Back alignment and domain information |
|---|
| >cd01802 AN1_N ubiquitin-like domain of AN1 | Back alignment and domain information |
|---|
| >cd01797 NIRF_N amino-terminal ubiquitin-like domain of Np95 and NIRF | Back alignment and domain information |
|---|
| >cd01798 parkin_N amino-terminal ubiquitin-like of parkin protein | Back alignment and domain information |
|---|
| >PTZ00044 ubiquitin; Provisional | Back alignment and domain information |
|---|
| >cd01810 ISG15_repeat2 ISG15 ubiquitin-like protein, second repeat of 2 | Back alignment and domain information |
|---|
| >cd01791 Ubl5 UBL5 ubiquitin-like modifier | Back alignment and domain information |
|---|
| >cd01794 DC_UbP_C dendritic cell derived ubiquitin-like protein | Back alignment and domain information |
|---|
| >KOG0003 consensus Ubiquitin/60s ribosomal protein L40 fusion [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd01806 Nedd8 Nebb8-like ubiquitin protein | Back alignment and domain information |
|---|
| >cd01805 RAD23_N Ubiquitin-like domain of RAD23 | Back alignment and domain information |
|---|
| >cd01809 Scythe_N Ubiquitin-like domain of Scythe protein | Back alignment and domain information |
|---|
| >KOG0004 consensus Ubiquitin/40S ribosomal protein S27a fusion [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd01803 Ubiquitin Ubiquitin | Back alignment and domain information |
|---|
| >cd01804 midnolin_N Ubiquitin-like domain of midnolin | Back alignment and domain information |
|---|
| >cd01796 DDI1_N DNA damage inducible protein 1 ubiquitin-like domain | Back alignment and domain information |
|---|
| >cd01808 hPLIC_N Ubiquitin-like domain of hPLIC-1 and hPLIC2 | Back alignment and domain information |
|---|
| >cd01792 ISG15_repeat1 ISG15 ubiquitin-like protein, first repeat of 2 | Back alignment and domain information |
|---|
| >cd01790 Herp_N Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain protein | Back alignment and domain information |
|---|
| >PF00240 ubiquitin: Ubiquitin family; InterPro: IPR000626 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade | Back alignment and domain information |
|---|
| >cd01812 BAG1_N Ubiquitin-like domain of BAG1 | Back alignment and domain information |
|---|
| >cd01763 Sumo Small ubiquitin-related modifier (SUMO) | Back alignment and domain information |
|---|
| >cd01800 SF3a120_C Ubiquitin-like domain of Mammalian splicing factor SF3a_120 | Back alignment and domain information |
|---|
| >TIGR00601 rad23 UV excision repair protein Rad23 | Back alignment and domain information |
|---|
| >PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >smart00213 UBQ Ubiquitin homologues | Back alignment and domain information |
|---|
| >cd01813 UBP_N UBP ubiquitin processing protease | Back alignment and domain information |
|---|
| >cd01815 BMSC_UbP_N Ubiquitin-like domain of BMSC-UbP | Back alignment and domain information |
|---|
| >cd01799 Hoil1_N Ubiquitin-like domain of HOIL1 | Back alignment and domain information |
|---|
| >KOG0010 consensus Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
| >cd01769 UBL Ubiquitin-like domain of UBL | Back alignment and domain information |
|---|
| >KOG0001 consensus Ubiquitin and ubiquitin-like proteins [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
| >PF11976 Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; InterPro: IPR022617 This entry includes small ubiquitin-related modifier (SUMO) proteins | Back alignment and domain information |
|---|
| >cd01814 NTGP5 Ubiquitin-like NTGP5 and ATGP4 | Back alignment and domain information |
|---|
| >cd01795 USP48_C USP ubiquitin-specific protease | Back alignment and domain information |
|---|
| >KOG0011 consensus Nucleotide excision repair factor NEF2, RAD23 component [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG4248 consensus Ubiquitin-like protein, regulator of apoptosis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd01789 Alp11_N Ubiquitin-like domain of Alp11 tubulin-folding cofactor B | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >cd00196 UBQ Ubiquitin-like proteins | Back alignment and domain information |
|---|
| >KOG3829 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14560 Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2KJ6_A 2KJR_A 1V6E_A 1T0Y_A | Back alignment and domain information |
|---|
| >PF13881 Rad60-SLD_2: Ubiquitin-2 like Rad60 SUMO-like; PDB: 1SE9_A 1WGH_A 2GOW_A | Back alignment and domain information |
|---|
| >cd01788 ElonginB Ubiquitin-like domain of Elongin B | Back alignment and domain information |
|---|
| >cd01801 Tsc13_N Ubiquitin-like domain of Tsc13 | Back alignment and domain information |
|---|
| >KOG0006 consensus E3 ubiquitin-protein ligase (Parkin protein) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF11543 UN_NPL4: Nuclear pore localisation protein NPL4; InterPro: IPR024682 Npl4, along with Ufd1, forms the heterodimer adaptor complex UN, which is involved in the recruitment of p97, an AAA ATPase, for tasks involving the ubiquitin pathway | Back alignment and domain information |
|---|
| >cd01811 OASL_repeat1 2'-5' oligoadenylate synthetase-like protein, repeat 1 of 2 | Back alignment and domain information |
|---|
| >PF07804 HipA_C: HipA-like C-terminal domain; InterPro: IPR012893 The members of this entry are similar to a region close to the C terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG1872 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF06702 DUF1193: Protein of unknown function (DUF1193); InterPro: IPR009581 This family is baesd on the C terminus of several hypothetical eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1769 consensus Ubiquitin-like proteins [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >PF11470 TUG-UBL1: GLUT4 regulating protein TUG; InterPro: IPR021569 TUG is a GLUT4 regulating protein and functions to retain membrane vesicles containing GLUT4 intracellularly | Back alignment and domain information |
|---|
| >cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >PF13019 Telomere_Sde2: Telomere stability and silencing | Back alignment and domain information |
|---|
| >PF10302 DUF2407: DUF2407 ubiquitin-like domain; InterPro: IPR019413 This entry represents a family of proteins of unknown function found in fungi | Back alignment and domain information |
|---|
| >cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >KOG4495 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B [Transcription] | Back alignment and domain information |
|---|
| >KOG4583 consensus Membrane-associated ER protein involved in stress response (contains ubiquitin-like domain) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >COG5227 SMT3 Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >PF00789 UBX: UBX domain; InterPro: IPR001012 The UBX domain is found in ubiquitin-regulatory proteins, which are members of the ubiquitination pathway, as well as a number of other proteins including FAF-1 (FAS-associated factor 1), the human Rep-8 reproduction protein and several hypothetical proteins from yeast | Back alignment and domain information |
|---|
| >KOG0013 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 644 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 1e-07
Identities = 87/572 (15%), Positives = 146/572 (25%), Gaps = 177/572 (30%)
Query: 148 KKMVKDIVKAIKMGVDPIPVNGGLGGAYYFRNSRFENVAIVKPTDEEPF--------APN 199
K ++ A D V +++ + K
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSI--LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76
Query: 200 NP-KGFVGKALGQPGLKRSVRVGETGIREVAAYLLDHDHFANVPPTALVKIRHSIFNIND 258
+ FV + L + K +L+ P+ + ++ +
Sbjct: 77 EMVQKFVEEVL-RINYK---------------FLMSPIKTEQRQPSMMTRMYIEQRD--- 117
Query: 259 GVNGHKTHNKNLVSKIASFQQFIKHNFDASDHGTSSFPVSEVHHIGILDIRIFNTDRHAG 318
+ +N N Q F K+N VS + L + R A
Sbjct: 118 -----RLYNDN--------QVFAKYN------------VSRLQPYLKLRQALLE-LRPAK 151
Query: 319 NLLVRKLDGVGSFGQVELIPIDHGLCLPETLEDPYFEWIHWPQASIPFSDDE-LEYIRKL 377
N+L+ DGV G+ + +D +CL ++ I W S + LE ++KL
Sbjct: 152 NVLI---DGVLGSGKTWVA-LD--VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 378 DPLSDCEMLRRELPMIR--------EACLRVLVLCTIFLKEAAEFGLCLSEIGEMMSREF 429
D R +A LR L + K L L +
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL----LKSKPYENCLLVLLNV-------- 253
Query: 430 RAGEEEPSELEVVCIEARRLVEEREKEVLSPKADAGDEDFLFDLDCEDAAFDFTPK---- 485
+ + + L+ R K+V D + + + TP
Sbjct: 254 ----QNAKAWNAFNLSCKILLTTRFKQV----TDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 486 -------MAADDYMSRAQ----FHLGIGFG------NGRF---------ALSK-LDESIE 518
D L I + L+ ++ S+
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 519 ELEESEGEEEQEGFSTLPAPERIPSISKLSM---------------SLKTTCLGDKNQK- 562
LE +E + + S P IP+I LS+ L L +K K
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTIL-LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 563 --------YQKFSGSKPENGCLSNTSSGHRSANEQ--LPACVSFVKLADLGED------- 605
Y + L HRS + +P L D
Sbjct: 424 STISIPSIYLELKVKLENEYAL------HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 606 -----------EWTLFLEKFQELLYPAFAARK 626
TLF F + F +K
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDF---RFLEQK 506
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 644 | |||
| 3plu_A | 93 | Ubiquitin-like modifier HUB1; ubiquitin-like, HUB- | 99.68 | |
| 3phx_B | 79 | Ubiquitin-like protein ISG15; OTU domain, DE-ubiqu | 99.63 | |
| 1uh6_A | 100 | Ubiquitin-like 5; beta-grAsp fold, structural geno | 99.62 | |
| 4dwf_A | 90 | HLA-B-associated transcript 3; ubiquitin-like doma | 99.6 | |
| 3dbh_I | 88 | NEDD8; cell cycle, activating enzyme, apoptosis, m | 99.57 | |
| 2kk8_A | 84 | Uncharacterized protein AT4G05270; solution arabid | 99.57 | |
| 3v6c_B | 91 | Ubiquitin; structural genomics, structural genomic | 99.57 | |
| 1wyw_B | 97 | Ubiquitin-like protein SMT3C; hydrolase; 2.10A {Ho | 99.57 | |
| 2lxa_A | 87 | Ubiquitin-like protein MDY2; ubiquitin-like domain | 99.56 | |
| 4fbj_B | 88 | NEDD8; effector-HOST target complex, glutamine dea | 99.56 | |
| 4eew_A | 88 | Large proline-rich protein BAG6; ubiquitin-like fo | 99.56 | |
| 2faz_A | 78 | Ubiquitin-like containing PHD and ring finger DOM | 99.56 | |
| 1wgh_A | 116 | Ubiquitin-like 3, HCG-1 protein; ubiquitin-like fo | 99.55 | |
| 2uyz_B | 79 | Small ubiquitin-related modifier 1; sumoylation, c | 99.55 | |
| 2wyq_A | 85 | HHR23A, UV excision repair protein RAD23 homolog A | 99.54 | |
| 1wh3_A | 87 | 59 kDa 2'-5'-oligoadenylate synthetase like protei | 99.52 | |
| 2hj8_A | 88 | Interferon-induced 17 kDa protein; HR2873B, human | 99.52 | |
| 1wy8_A | 89 | NP95-like ring finger protein, isoform A; ubiquiti | 99.52 | |
| 1uel_A | 95 | HHR23B, UV excision repair protein RAD23 homolog B | 99.52 | |
| 4a20_A | 98 | Ubiquitin-like protein MDY2; protein binding, GET- | 99.51 | |
| 1ndd_A | 76 | NEDD8, protein (ubiquitin-like protein NEDD8); pro | 99.51 | |
| 3m62_B | 106 | UV excision repair protein RAD23; armadillo-like r | 99.51 | |
| 4hcn_B | 98 | Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidas | 99.51 | |
| 2dzi_A | 81 | Ubiquitin-like protein 4A; GDX, structural genomic | 99.5 | |
| 3n3k_B | 85 | Ubiquitin; hydrolase, protease, thiol protease, DU | 99.49 | |
| 2kan_A | 94 | Uncharacterized protein AR3433A; ubiquitin fold, a | 99.49 | |
| 3k9o_B | 96 | Ubiquitin, UBB+1; E2-25K, complex structure, ATP-b | 99.49 | |
| 2kdb_A | 99 | Homocysteine-responsive endoplasmic reticulum- res | 99.49 | |
| 1sif_A | 88 | Ubiquitin; hydrophobic mutants, folding, stability | 99.48 | |
| 2bwf_A | 77 | Ubiquitin-like protein DSK2; signaling protein, UB | 99.48 | |
| 1ttn_A | 106 | DC-UBP, dendritic cell-derived ubiquitin-like prot | 99.48 | |
| 3mtn_B | 85 | UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquit | 99.48 | |
| 3a9j_A | 76 | Ubiquitin; protein complex, cytoplasm, isopeptide | 99.47 | |
| 1wx8_A | 96 | Riken cDNA 4931431F19; ubiquitin-like domain, ubiq | 99.47 | |
| 2l7r_A | 93 | Ubiquitin-like protein FUBI; structural genomics, | 99.47 | |
| 3rt3_B | 159 | Ubiquitin-like protein ISG15; ubiquitin-like domai | 99.47 | |
| 2fnj_B | 118 | Transcription elongation factor B polypeptide 2; b | 99.46 | |
| 1wgd_A | 93 | Homocysteine-responsive endoplasmic reticulum- res | 99.46 | |
| 1v2y_A | 105 | 3300001G02RIK protein; hypothetical protein, ubiqu | 99.45 | |
| 3b1l_X | 76 | E3 ubiquitin-protein ligase parkin; proteasome, AL | 99.17 | |
| 3l0w_B | 169 | Monoubiquitinated proliferating cell nuclear antig | 99.44 | |
| 3vdz_A | 111 | Ubiquitin-40S ribosomal protein S27A; gadolinium, | 99.44 | |
| 2klc_A | 101 | Ubiquilin-1; ubiquitin-like, structural genomics, | 99.43 | |
| 1yqb_A | 100 | Ubiquilin 3; structural genomics consortium, ubiqu | 99.43 | |
| 1se9_A | 126 | Ubiquitin family; ubiquitin-like, cell-free, wheat | 99.43 | |
| 1wju_A | 100 | NEDD8 ultimate buster-1; ubiquitin-like domain, st | 99.43 | |
| 1yx5_B | 98 | Ubiquitin; proteasome, UIM, hydrolase; NMR {Homo s | 99.42 | |
| 3u30_A | 172 | Ubiquitin, linear DI-ubiquitin; immune system; 2.4 | 99.42 | |
| 4ajy_B | 118 | Transcription elongation factor B polypeptide 2; E | 99.42 | |
| 2xzm_9 | 189 | RPS31E; ribosome, translation; 3.93A {Tetrahymena | 99.42 | |
| 4dbg_A | 105 | Ranbp-type and C3HC4-type zinc finger-containing; | 99.42 | |
| 2gow_A | 125 | HCG-1 protein, ubiquitin-like protein 3; BC059385, | 99.42 | |
| 1v5o_A | 102 | 1700011N24RIK protein; hypothetical protein, ubiqu | 99.4 | |
| 1wx7_A | 106 | Ubiquilin 3; ubiquitin-like domain, structural gen | 99.39 | |
| 1j8c_A | 125 | Ubiquitin-like protein hplic-2; ubiquitin-like dom | 99.39 | |
| 2kdi_A | 114 | Ubiquitin, vacuolar protein sorting-associated pro | 99.39 | |
| 3q3f_A | 189 | Ribonuclease/ubiquitin chimeric protein; domain SW | 99.39 | |
| 3u30_A | 172 | Ubiquitin, linear DI-ubiquitin; immune system; 2.4 | 99.38 | |
| 3m63_B | 101 | Ubiquitin domain-containing protein DSK2; armadill | 99.38 | |
| 3rt3_B | 159 | Ubiquitin-like protein ISG15; ubiquitin-like domai | 99.38 | |
| 2ojr_A | 111 | Ubiquitin; lanthide-binding TAG, terbium, TB, SAD | 99.38 | |
| 2dzm_A | 100 | FAS-associated factor 1; ubiquitin-like domain, HF | 99.37 | |
| 1we6_A | 111 | Splicing factor, putative; structural genomics, ub | 99.37 | |
| 1wia_A | 95 | Hypothetical ubiquitin-like protein (riken cDNA 20 | 99.36 | |
| 3u5e_m | 128 | 60S ribosomal protein L40; translation, ribosome, | 99.36 | |
| 1v5t_A | 90 | 8430435I17RIK protein; hypothetical protein, ubiqu | 99.34 | |
| 1wgg_A | 96 | Ubiquitin carboxyl-terminal hydrolase 14; ubiquiti | 99.33 | |
| 1x1m_A | 107 | Ubiquitin-like protein SB132; structural genomics, | 99.33 | |
| 3u5c_f | 152 | 40S ribosomal protein S31; translation, ribosome, | 99.31 | |
| 3b08_A | 152 | Polyubiquitin-C, ubiquitin; protein complex, signa | 99.31 | |
| 3b08_A | 152 | Polyubiquitin-C, ubiquitin; protein complex, signa | 99.3 | |
| 1wxv_A | 92 | BAG-family molecular chaperone regulator-1; struct | 99.29 | |
| 2kjr_A | 95 | CG11242; UBL, ubiquitin, ubiquitin-like, structura | 99.29 | |
| 2kd0_A | 85 | LRR repeats and ubiquitin-like domain-containing p | 99.29 | |
| 2dzj_A | 88 | Synaptic glycoprotein SC2; ubiquitin-like fold, st | 99.27 | |
| 1v86_A | 95 | DNA segment, CHR 7, wayne state university 128, ex | 99.27 | |
| 1we7_A | 115 | SF3A1 protein; structural genomics, ubiquitin-like | 99.26 | |
| 2daf_A | 118 | FLJ35834 protein; hypothetical protein FLJ35834, u | 99.21 | |
| 3ai5_A | 307 | Yeast enhanced green fluorescent protein, ubiquit; | 99.18 | |
| 1wf9_A | 107 | NPL4 family protein; beta-grAsp fold like domain, | 99.15 | |
| 2kj6_A | 97 | Tubulin folding cofactor B; methods development, N | 99.15 | |
| 1oqy_A | 368 | HHR23A, UV excision repair protein RAD23 homolog A | 99.13 | |
| 2io1_B | 94 | Small ubiquitin-related modifier 3 precursor; SUMO | 99.11 | |
| 4b6w_A | 86 | Tubulin-specific chaperone; CAP-Gly, ubiquitin-lik | 99.09 | |
| 1wm3_A | 72 | Ubiquitin-like protein SMT3B; ubiquitin fold, half | 99.02 | |
| 1v6e_A | 95 | Cytoskeleton-associated protein 1; tubulin-specifi | 99.01 | |
| 2kzr_A | 86 | Ubiquitin thioesterase OTU1; structural genomics, | 99.01 | |
| 3a4r_A | 79 | Nfatc2-interacting protein; ubiquitin fold, coiled | 98.99 | |
| 1t0y_A | 122 | Tubulin folding cofactor B; ubiquitin-like, cytosk | 98.97 | |
| 2io0_B | 91 | Small ubiquitin-related modifier 2 precursor; SUMO | 98.96 | |
| 2d07_B | 93 | Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Ho | 98.88 | |
| 2k8h_A | 110 | Small ubiquitin protein; SUMO, post-translational | 98.87 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 98.87 | |
| 1wz0_A | 104 | Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-li | 98.85 | |
| 2eke_C | 106 | Ubiquitin-like protein SMT3; UBC9, SUMO binding mo | 98.8 | |
| 1wjn_A | 97 | Tubulin-folding protein TBCE; ubiquitin-like domai | 98.45 | |
| 3kyd_D | 115 | Small ubiquitin-related modifier 1; SUMO, thioeste | 98.37 | |
| 3pge_A | 200 | SUMO-modified proliferating cell nuclear antigen; | 98.12 | |
| 4efo_A | 94 | Serine/threonine-protein kinase TBK1; ubiquitin li | 98.1 | |
| 3tix_A | 207 | Ubiquitin-like protein SMT3, RNA-induced transcri | 97.96 | |
| 3v7o_A | 227 | Minor nucleoprotein VP30; ssgcid, seattle structur | 97.56 | |
| 3uf8_A | 209 | Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- | 97.51 | |
| 2pjh_A | 80 | Protein NPL4, nuclear protein localization protein | 97.29 | |
| 1cja_A | 342 | Protein (actin-fragmin kinase); transferase; HET: | 97.03 | |
| 3ix6_A | 360 | TS, tsase, thymidylate synthase; niaid, ssgcid, se | 96.72 | |
| 2jxx_A | 97 | Nfatc2-interacting protein; nuclear factor of acti | 96.64 | |
| 4da1_A | 389 | Protein phosphatase 1K, mitochondrial; metal-ION-a | 96.38 | |
| 3akj_A | 325 | CTKA; protein kinase, transferase; 2.00A {Helicoba | 96.31 | |
| 2al3_A | 90 | TUG long isoform; TUG UBL1 insulin, endocytosis/ex | 96.05 | |
| 2kc2_A | 128 | Talin-1, F1; FERM, adhesion, cell membrane, cell p | 95.87 | |
| 2l76_A | 95 | Nfatc2-interacting protein; ubiquitin-like domain, | 95.22 | |
| 3goe_A | 82 | DNA repair protein RAD60; SUMO-like domain, sumoyl | 94.32 | |
| 3qx1_A | 84 | FAS-associated factor 1; UBX, protein binding, P97 | 84.14 | |
| 3ls8_A | 614 | Phosphatidylinositol 3-kinase catalytic subunit ty | 80.59 | |
| 3tpd_A | 440 | Serine/threonine-protein kinase HIPA; persistence, | 80.05 |
| >3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide binding protein; 1.40A {Saccharomyces cerevisiae} PDB: 3plv_A 1m94_A 1p0r_A | Back alignment and structure |
|---|
Probab=99.68 E-value=6e-17 Score=142.17 Aligned_cols=70 Identities=23% Similarity=0.264 Sum_probs=65.6
Q ss_pred CCCceEEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHhCCCCCCcEEEECCeEeccCCC----CCCCCCceeee
Q 006461 37 PAGRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLS----AVRNDSPLLLT 106 (644)
Q Consensus 37 ~sd~~qIfVKTltGkt~~~eVd~sdTV~~VKqkIqekeGIP~eqQRLIFgGr~LeDd~t----gI~~dStLHLv 106 (644)
.+.-|+|||||.+|+++.++|++++||.+||++|++++|||+++|||+|+|++|+|+.+ +|++++||||.
T Consensus 18 ~~~mIqI~Vk~~~Gkk~~v~v~p~DTI~~LK~~I~~k~Gip~~qQrLif~Gk~LkD~~TL~dY~I~dgstLhL~ 91 (93)
T 3plu_A 18 GSHMIEVVVNDRLGKKVRVKCLGEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELY 91 (93)
T ss_dssp --CEEEEEEECTTSCEEEEEEETTSBHHHHHHHHHHHHTCCGGGEEEEETTEECCTTSBTGGGTCCTTCEEEEE
T ss_pred CCceEEEEEECCCCCEEEEEECCcCHHHHHHHHHHHHhCCCHHHEEEEeCCEEccCcCCHHHcCCCCCCEEEEE
Confidence 45578999999999999999999999999999999999999999999999999999986 99999999994
|
| >3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1uh6_A Ubiquitin-like 5; beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >4dwf_A HLA-B-associated transcript 3; ubiquitin-like domain, BAT3 protein, PF00240, structural GEN joint center for structural genomics, JCSG; 1.80A {Homo sapiens} PDB: 1wx9_A | Back alignment and structure |
|---|
| >3dbh_I NEDD8; cell cycle, activating enzyme, apoptosis, membrane, UBL conjugation pathway, ATP-binding, ligase, nucleotide- binding, polymorphism; 2.85A {Homo sapiens} SCOP: d.15.1.1 PDB: 3dbr_I 3dbl_I | Back alignment and structure |
|---|
| >2kk8_A Uncharacterized protein AT4G05270; solution arabidopsis thaliana, uncharacterized putative protein, NESG, structural genomics; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3v6c_B Ubiquitin; structural genomics, structural genomics consortium, SGC, UB protease, hydrolase-signaling protein complex; 1.70A {Homo sapiens} PDB: 3v6e_B | Back alignment and structure |
|---|
| >1wyw_B Ubiquitin-like protein SMT3C; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 1y8r_C* 2asq_A 2pe6_B 1a5r_A 2kqs_A 3kyc_D* 3rzw_C | Back alignment and structure |
|---|
| >2lxa_A Ubiquitin-like protein MDY2; ubiquitin-like domain, protein-protein interaction, SGT2 BIN domain, GET pathway, protein binding; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4fbj_B NEDD8; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.60A {Homo sapiens} PDB: 4f8c_B | Back alignment and structure |
|---|
| >4eew_A Large proline-rich protein BAG6; ubiquitin-like fold, GP78-binding, chaperone; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2faz_A Ubiquitin-like containing PHD and ring finger DOM protein 1; cell cycle, DNA damage, DNA repair, DNA-binding, ligase, Met binding, nuclear protein; 2.00A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wgh_A Ubiquitin-like 3, HCG-1 protein; ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2uyz_B Small ubiquitin-related modifier 1; sumoylation, cell division, nuclear protein, ubiquitin-like modifier, UBL conjugation pathway; 1.4A {Homo sapiens} SCOP: d.15.1.1 PDB: 2vrr_B 2iy0_B 2iy1_B 2g4d_B 2las_A 2io2_B 1z5s_B 3uip_B* 1tgz_B* 2bf8_B | Back alignment and structure |
|---|
| >2wyq_A HHR23A, UV excision repair protein RAD23 homolog A; DNA binding protein, DNA excision repair, proteasomal degrad polyubiquitin; 1.65A {Homo sapiens} PDB: 1p98_A 1p9d_U 1p1a_A | Back alignment and structure |
|---|
| >1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2hj8_A Interferon-induced 17 kDa protein; HR2873B, human ISG15, structure, northeast structural genomics consortium, protein structure initiative, NESG; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wy8_A NP95-like ring finger protein, isoform A; ubiquitin-like domain, NP95/ICBP90-like ring finger (NIRF), ubiquitin ligase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1uel_A HHR23B, UV excision repair protein RAD23 homolog B; UBL, UIM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >4a20_A Ubiquitin-like protein MDY2; protein binding, GET-pathway, tail-anchored proteins; 1.78A {Saccharomyces cerevisiae} PDB: 2lxc_A 4goc_A | Back alignment and structure |
|---|
| >1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A | Back alignment and structure |
|---|
| >3m62_B UV excision repair protein RAD23; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4hcn_B Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidase, NEDD8, protein binding; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2kan_A Uncharacterized protein AR3433A; ubiquitin fold, alpha+beta, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3k9o_B Ubiquitin, UBB+1; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 2k25_A 2kx0_A | Back alignment and structure |
|---|
| >2kdb_A Homocysteine-responsive endoplasmic reticulum- resident ubiquitin-like domain member...; UBL domain, membrane, polymorphism, transmembrane; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S | Back alignment and structure |
|---|
| >1ttn_A DC-UBP, dendritic cell-derived ubiquitin-like protein; ubiquitin-like domain, solution structure, signaling protein; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ... | Back alignment and structure |
|---|
| >1wx8_A Riken cDNA 4931431F19; ubiquitin-like domain, ubiquilin 1-like, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2l7r_A Ubiquitin-like protein FUBI; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3rt3_B Ubiquitin-like protein ISG15; ubiquitin-like domain, isgylation, antiviral protein-viral P complex; 2.01A {Homo sapiens} PDB: 3sdl_C 3r66_C 3pse_B 1z2m_A | Back alignment and structure |
|---|
| >2fnj_B Transcription elongation factor B polypeptide 2; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.15.1.1 PDB: 1lm8_B 1lqb_A 1vcb_A 2c9w_B 2izv_B 2jz3_B 2xai_C 3dcg_A 3zrc_A* 3zrf_A | Back alignment and structure |
|---|
| >1wgd_A Homocysteine-responsive endoplasmic reticulum- resident ubiquitin-like domain member...; ENDPLASMIC reticulum stress, UBL domain; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3b1l_X E3 ubiquitin-protein ligase parkin; proteasome, ALFA-beta-protein; 1.85A {Mus musculus} PDB: 1mg8_A 2zeq_A 2knb_A 1iyf_A | Back alignment and structure |
|---|
| >3l0w_B Monoubiquitinated proliferating cell nuclear antigen, proliferating cell nuclear antigen; replication, DNA damage, DNA repair; 2.80A {Saccharomyces cerevisiae} PDB: 3l10_B | Back alignment and structure |
|---|
| >3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A | Back alignment and structure |
|---|
| >2klc_A Ubiquilin-1; ubiquitin-like, structural genomics, PSI-2, protein structur initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1yqb_A Ubiquilin 3; structural genomics consortium, ubiquitin, ubiquitin-like domain, structural genomics, signaling protein SGC; 2.00A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1se9_A Ubiquitin family; ubiquitin-like, cell-free, wheat GERM, structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wju_A NEDD8 ultimate buster-1; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1yx5_B Ubiquitin; proteasome, UIM, hydrolase; NMR {Homo sapiens} SCOP: d.15.1.1 PDB: 1yx6_B | Back alignment and structure |
|---|
| >3u30_A Ubiquitin, linear DI-ubiquitin; immune system; 2.43A {Homo sapiens} | Back alignment and structure |
|---|
| >4ajy_B Transcription elongation factor B polypeptide 2; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 1lqb_A 1vcb_A 2c9w_B 2izv_B 2jz3_B 2xai_C 3dcg_A 3zrc_A* 3zrf_A 3ztc_A* 3ztd_A* 3zun_A* 1lm8_B 4b95_A* 2fnj_B 4b9k_A* 4awj_A* | Back alignment and structure |
|---|
| >2xzm_9 RPS31E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_9 | Back alignment and structure |
|---|
| >4dbg_A Ranbp-type and C3HC4-type zinc finger-containing; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens} PDB: 2lgy_A | Back alignment and structure |
|---|
| >2gow_A HCG-1 protein, ubiquitin-like protein 3; BC059385, structural genomics, protein structure initiative, PSI; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v5o_A 1700011N24RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wx7_A Ubiquilin 3; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1j8c_A Ubiquitin-like protein hplic-2; ubiquitin-like domain, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2kdi_A Ubiquitin, vacuolar protein sorting-associated protein 27 fusion protein; ubiquitin interacting motif, UIM, protein domain interface; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3q3f_A Ribonuclease/ubiquitin chimeric protein; domain SWAP, oligomerization, ubiquitin insertion, hydrolase binding; 2.17A {Bacillus amyloliquefaciens} | Back alignment and structure |
|---|
| >3u30_A Ubiquitin, linear DI-ubiquitin; immune system; 2.43A {Homo sapiens} | Back alignment and structure |
|---|
| >3m63_B Ubiquitin domain-containing protein DSK2; armadillo-like repeats, UBL conjugation pathway, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3rt3_B Ubiquitin-like protein ISG15; ubiquitin-like domain, isgylation, antiviral protein-viral P complex; 2.01A {Homo sapiens} PDB: 3sdl_C 3r66_C 3pse_B 1z2m_A | Back alignment and structure |
|---|
| >2ojr_A Ubiquitin; lanthide-binding TAG, terbium, TB, SAD phasing, protein binding; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2dzm_A FAS-associated factor 1; ubiquitin-like domain, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1we6_A Splicing factor, putative; structural genomics, ubiquitin-like domain, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wia_A Hypothetical ubiquitin-like protein (riken cDNA 2010008E23); 'structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3u5e_m 60S ribosomal protein L40; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_m 4b6a_m 4a18_K 4a19_K 4a1b_K 4a1d_K 4adx_5 3izc_p 3izs_p 3iz5_p 3izr_p | Back alignment and structure |
|---|
| >1v5t_A 8430435I17RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 2kx3_A | Back alignment and structure |
|---|
| >1wgg_A Ubiquitin carboxyl-terminal hydrolase 14; ubiquitin specific protease 14, USP14, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1x1m_A Ubiquitin-like protein SB132; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3u5c_f 40S ribosomal protein S31; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_f | Back alignment and structure |
|---|
| >3b08_A Polyubiquitin-C, ubiquitin; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Homo sapiens} PDB: 2w9n_A* 3b0a_A* 3axc_A 2zvn_A 2zvo_A 2y5b_B | Back alignment and structure |
|---|
| >3b08_A Polyubiquitin-C, ubiquitin; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Homo sapiens} PDB: 2w9n_A* 3b0a_A* 3axc_A 2zvn_A 2zvo_A 2y5b_B | Back alignment and structure |
|---|
| >1wxv_A BAG-family molecular chaperone regulator-1; structural genomics, apoptosis, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2kjr_A CG11242; UBL, ubiquitin, ubiquitin-like, structural genomics, PSI-2, protein structure initiative; NMR {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2kd0_A LRR repeats and ubiquitin-like domain-containing protein AT2G30105; ubiquitin-like protein, NESG, leucine-rich repeat, structural genomics; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2dzj_A Synaptic glycoprotein SC2; ubiquitin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v86_A DNA segment, CHR 7, wayne state university 128, expressed; ubiquitin fold, structural genomics, D7WSU128E protein; HET: DNA; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1we7_A SF3A1 protein; structural genomics, ubiquitin-like domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 1zkh_A | Back alignment and structure |
|---|
| >2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3ai5_A Yeast enhanced green fluorescent protein, ubiquit; ubiquitin, fusion protein, fluore protein, transcription; HET: CR2; 1.40A {Aequorea victoria} PDB: 3ako_B* | Back alignment and structure |
|---|
| >1wf9_A NPL4 family protein; beta-grAsp fold like domain, hypothetical protein, structural genomics, NPPSFA; NMR {Arabidopsis thaliana} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A | Back alignment and structure |
|---|
| >2io1_B Small ubiquitin-related modifier 3 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.60A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >4b6w_A Tubulin-specific chaperone; CAP-Gly, ubiquitin-like; HET: MSE; 2.35A {Trypanosoma brucei brucei strain 927} | Back alignment and structure |
|---|
| >1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B | Back alignment and structure |
|---|
| >1v6e_A Cytoskeleton-associated protein 1; tubulin-specific chaperone B, tubulin folding cofactor B, microtubule, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2kzr_A Ubiquitin thioesterase OTU1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, hydrolase; NMR {Mus musculus} | Back alignment and structure |
|---|
| >3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A | Back alignment and structure |
|---|
| >1t0y_A Tubulin folding cofactor B; ubiquitin-like, cytoskeleton, microtubule, CESG, structural genomics, protein structure initiative, PSI; NMR {Caenorhabditis elegans} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2d07_B Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 2rpq_A 2awt_A 2io3_B 2iyd_B 1u4a_A 2k1f_A | Back alignment and structure |
|---|
| >2k8h_A Small ubiquitin protein; SUMO, post-translational modifier, signaling protein; NMR {Trypanosoma brucei} | Back alignment and structure |
|---|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1wz0_A Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-like molecule, structural genomics, sentrin2, NPPFSA; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wjn_A Tubulin-folding protein TBCE; ubiquitin-like domain, progressive motor neuropathy, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3pge_A SUMO-modified proliferating cell nuclear antigen; DNA replication, DNA binding protein; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4efo_A Serine/threonine-protein kinase TBK1; ubiquitin like domain, transferase; 1.77A {Homo sapiens} | Back alignment and structure |
|---|
| >3tix_A Ubiquitin-like protein SMT3, RNA-induced transcri silencing complex protein TAS3; PIN, rossmann fold, SPOC, alpha-helical hairpin, heterochrom silencing, RITS, RNAI, argonaute; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3v7o_A Minor nucleoprotein VP30; ssgcid, seattle structural genomics center for infectious disease, SMT, transcription; 2.25A {Reston ebolavirus} | Back alignment and structure |
|---|
| >3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A* | Back alignment and structure |
|---|
| >2pjh_A Protein NPL4, nuclear protein localization protein 4 homolog; UFD1, NPL4, AAA, protein binding, transport protein; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3 | Back alignment and structure |
|---|
| >3ix6_A TS, tsase, thymidylate synthase; niaid, ssgcid, seattle structural center for infectious DISE brucellosis, orchitis, epididymitis, mastitis; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
| >2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A | Back alignment and structure |
|---|
| >3akj_A CTKA; protein kinase, transferase; 2.00A {Helicobacter pylori} PDB: 3akk_A* 3akl_A* | Back alignment and structure |
|---|
| >2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2 | Back alignment and structure |
|---|
| >2kc2_A Talin-1, F1; FERM, adhesion, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane, phosphoprotein, structural protein; NMR {Mus musculus} | Back alignment and structure |
|---|
| >2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A* | Back alignment and structure |
|---|
| >3qx1_A FAS-associated factor 1; UBX, protein binding, P97 binding; 1.60A {Homo sapiens} PDB: 3qwz_B* 3qc8_B 3qca_A 3qq8_B 3r3m_B 1h8c_A | Back alignment and structure |
|---|
| >3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A | Back alignment and structure |
|---|
| >3tpd_A Serine/threonine-protein kinase HIPA; persistence, multidrug tolerance, HIPB, transferase; 1.50A {Escherichia coli} PDB: 3tpe_A* 3tpv_B* 3tpt_A* 3hzi_A* 2wiu_A 3tpb_A 3dnu_A 3dnt_A 3dnv_A* 3fbr_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 644 | ||||
| d2zeqa1 | 78 | d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin | 0.002 |
| >d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]} Length = 78 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: Ubiquitin-like family: Ubiquitin-related domain: Ubiquitin-like domain of parkin species: Mouse (Mus musculus) [TaxId: 10090]
Score = 35.3 bits (81), Expect = 0.002
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 42 RVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKND 93
VFV+ + +++D + +K + VP D+ + F L N
Sbjct: 4 IVFVRFNSSYGFPVEVDSDTSILQLKEVVAKRQGVPADQLRVIFAGKELPNH 55
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 644 | |||
| d1wh3a_ | 87 | 2'-5'-oligoadenylate synthetase-like protein, OASL | 99.72 | |
| d1bt0a_ | 73 | Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxI | 99.71 | |
| d1z2ma2 | 76 | Interferon-induced 15 kDa protein {Human (Homo sap | 99.7 | |
| d2zeqa1 | 78 | Ubiquitin-like domain of parkin {Mouse (Mus muscul | 99.7 | |
| d1wx9a1 | 73 | Large proline-rich protein BAT3 {Human (Homo sapie | 99.67 | |
| d2faza1 | 76 | Ubiquitin-like PHD and RING finger domain-containi | 99.66 | |
| d1ogwa_ | 76 | Ubiquitin {Human (Homo sapiens) [TaxId: 9606]} | 99.66 | |
| d1ttna1 | 80 | Dendritic cell-derived ubiquitin-like protein {Hum | 99.66 | |
| d1wy8a1 | 76 | Ubiquitin-like PHD and RING finger domain-containi | 99.62 | |
| d1uela_ | 95 | Ubiquitin-like domain of Rad23 homolog B (Hhr23B) | 99.61 | |
| d1m94a_ | 73 | Ubiquitin-like modifier protein hub1 {Baker's yeas | 99.6 | |
| d1z2ma1 | 76 | Interferon-induced 15 kDa protein {Human (Homo sap | 99.57 | |
| d2bwfa1 | 73 | DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 99.57 | |
| d1oqya4 | 77 | Ubiquitin-like domain of Rad23 homolog A (Hhr23a) | 99.53 | |
| d1uh6a_ | 100 | Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculu | 99.53 | |
| d1yqba1 | 84 | Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.52 | |
| d1wgha_ | 116 | Ubiquitin-like protein 3, Ubl3 {Mouse (Mus musculu | 99.5 | |
| d1wx8a1 | 83 | 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090] | 99.49 | |
| d1j8ca_ | 103 | Ubiquitin-like N-terminal domain of PLIC-2 {Human | 99.46 | |
| d1v2ya_ | 105 | Ubiquitin-like protein 3300001g02rik {Mouse (Mus m | 99.44 | |
| d1v5oa_ | 102 | 1700011n24rik protein {Mouse (Mus musculus) [TaxId | 99.43 | |
| d1wiaa_ | 95 | Ubiquitin-like protein bab25500 (2010008E23Rik) {M | 99.41 | |
| d1wgga_ | 96 | Ubiquitin carboxyl-terminal hydrolase 14 {Mouse (M | 99.4 | |
| d1se9a_ | 101 | Hypothetical protein At3g01050 {Thale cress (Arabi | 99.4 | |
| d1wgda_ | 93 | Homocysteine-responsive endoplasmic reticulum-resi | 99.4 | |
| d1zkha1 | 86 | Splicing factor 3 subunit 1, C-terminal domain {Hu | 99.39 | |
| d1wjua_ | 100 | NEDD8 ultimate buster-1, NUB1 {Human (Homo sapiens | 99.33 | |
| d1we6a_ | 111 | Splicing factor 3 subunit 1, C-terminal domain {Th | 99.32 | |
| d2c9wb1 | 103 | Elongin B {Human (Homo sapiens) [TaxId: 9606]} | 99.26 | |
| d1v5ta_ | 90 | 8430435i17rik protein {Mouse (Mus musculus) [TaxId | 99.26 | |
| d1v86a_ | 95 | hypothetical D7wsu128e protein {Mouse (Mus musculu | 99.22 | |
| d1wxva1 | 81 | Bag-family molecular chaperone regulator-1 {Human | 99.16 | |
| d1v6ea_ | 95 | Ubiquitin-like domain of tubulin folding cofactor | 99.03 | |
| d1euvb_ | 79 | SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomy | 98.88 | |
| d2uyzb1 | 77 | SUMO-1 (smt3 homologue) {Human (Homo sapiens) [Tax | 98.8 | |
| d1wjna_ | 97 | Tubulin-folding protein TbcE {Mouse (Mus musculus) | 98.77 | |
| d1x1ma1 | 94 | Ubiquitin-like protein 7 {Mouse (Mus musculus) [Ta | 98.69 | |
| d1t0ya_ | 90 | Ubiquitin-like domain of tubulin folding cofactor | 98.53 | |
| d1wm3a_ | 72 | SUMO-2 {Human (Homo sapiens) [TaxId: 9606]} | 97.41 | |
| d1wf9a1 | 94 | NPL4-like protein 1 {Thale cress (Arabidopsis thal | 96.85 | |
| d2al3a1 | 76 | Tether containing UBX domain for GLUT4 (Tug) {Mous | 94.76 | |
| d1cjaa_ | 342 | Actin-fragmin kinase, catalytic domain {Physarum p | 94.36 | |
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 90.79 |
| >d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-Grasp (ubiquitin-like) superfamily: Ubiquitin-like family: Ubiquitin-related domain: 2'-5'-oligoadenylate synthetase-like protein, OASL species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=6.8e-18 Score=142.62 Aligned_cols=72 Identities=18% Similarity=0.361 Sum_probs=68.8
Q ss_pred CCCCceEEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHhCCCCCCcEEEECCeEeccCCC----CCCCCCceeeec
Q 006461 36 QPAGRRRVFVQTETGCVLGMDLDRSDNAHTVKRRLQLALNVPTDESSLTFGDMVLKNDLS----AVRNDSPLLLTR 107 (644)
Q Consensus 36 ~~sd~~qIfVKTltGkt~~~eVd~sdTV~~VKqkIqekeGIP~eqQRLIFgGr~LeDd~t----gI~~dStLHLvR 107 (644)
..+..|+|||||.+|+++.++|++++||.+||++|++++|||+++|||+|+|++|+|+.+ +|++++||||+.
T Consensus 3 ~~s~~mqI~Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~qrLi~~Gk~L~d~~tL~~y~I~~~stl~l~~ 78 (87)
T d1wh3a_ 3 SGSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQGQVLQDWLGLGIYGIQDSDTLILSK 78 (87)
T ss_dssp CCSSSEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTTEEEEETTEECCSSSBHHHHTCCTTEEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCcCcHHHHHHHHHHHHCcChHHeEEEeeceEcCCCCcHHHcCCCCCCEEEEEe
Confidence 467889999999999999999999999999999999999999999999999999999986 999999999965
|
| >d1bt0a_ d.15.1.1 (A:) Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2faza1 d.15.1.1 (A:1-76) Ubiquitin-like PHD and RING finger domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ogwa_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uela_ d.15.1.1 (A:) Ubiquitin-like domain of Rad23 homolog B (Hhr23B) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1oqya4 d.15.1.1 (A:1-77) Ubiquitin-like domain of Rad23 homolog A (Hhr23a) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wgha_ d.15.1.1 (A:) Ubiquitin-like protein 3, Ubl3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v2ya_ d.15.1.1 (A:) Ubiquitin-like protein 3300001g02rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v5oa_ d.15.1.1 (A:) 1700011n24rik protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wiaa_ d.15.1.1 (A:) Ubiquitin-like protein bab25500 (2010008E23Rik) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wgga_ d.15.1.1 (A:) Ubiquitin carboxyl-terminal hydrolase 14 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1se9a_ d.15.1.1 (A:) Hypothetical protein At3g01050 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wgda_ d.15.1.1 (A:) Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zkha1 d.15.1.1 (A:1-86) Splicing factor 3 subunit 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjua_ d.15.1.1 (A:) NEDD8 ultimate buster-1, NUB1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2c9wb1 d.15.1.1 (B:2-104) Elongin B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wxva1 d.15.1.1 (A:7-87) Bag-family molecular chaperone regulator-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjna_ d.15.1.1 (A:) Tubulin-folding protein TbcE {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x1ma1 d.15.1.1 (A:8-101) Ubiquitin-like protein 7 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1t0ya_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1wm3a_ d.15.1.1 (A:) SUMO-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wf9a1 d.15.1.1 (A:8-101) NPL4-like protein 1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|