Citrus Sinensis ID: 006472
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 643 | 2.2.26 [Sep-21-2011] | |||||||
| O55236 | 597 | mRNA-capping enzyme OS=Mu | yes | no | 0.783 | 0.844 | 0.337 | 2e-74 | |
| O60942 | 597 | mRNA-capping enzyme OS=Ho | yes | no | 0.785 | 0.845 | 0.340 | 1e-73 | |
| Q6NY98 | 598 | mRNA-capping enzyme OS=Da | yes | no | 0.771 | 0.829 | 0.343 | 1e-70 | |
| Q17607 | 623 | mRNA-capping enzyme OS=Ca | yes | no | 0.808 | 0.834 | 0.308 | 3e-67 | |
| P40997 | 402 | mRNA-capping enzyme subun | yes | no | 0.493 | 0.788 | 0.317 | 6e-35 | |
| Q6FQ31 | 449 | mRNA-capping enzyme subun | yes | no | 0.469 | 0.672 | 0.302 | 7e-31 | |
| Q7SB53 | 402 | mRNA-capping enzyme subun | N/A | no | 0.460 | 0.736 | 0.277 | 5e-30 | |
| Q6CWR0 | 466 | mRNA-capping enzyme subun | yes | no | 0.511 | 0.706 | 0.283 | 2e-28 | |
| Q01159 | 459 | mRNA-capping enzyme subun | yes | no | 0.474 | 0.664 | 0.291 | 3e-27 | |
| P78587 | 449 | mRNA-capping enzyme subun | N/A | no | 0.479 | 0.685 | 0.288 | 4e-27 |
| >sp|O55236|MCE1_MOUSE mRNA-capping enzyme OS=Mus musculus GN=Rngtt PE=1 SV=1 | Back alignment and function desciption |
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Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 294/586 (50%), Gaps = 82/586 (13%)
Query: 84 NKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGL 143
NK+PP WL+CP GQ + G +P K L ++ + R+ + + L+ L K+ L
Sbjct: 4 NKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSL 63
Query: 144 VIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKY 203
++DLTNT+R+Y +D++KEGIK++K+QCKG P + F+ +F ++ +
Sbjct: 64 LVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERF--NERSPPEL 121
Query: 204 ILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263
I VHCTHG NRTG++I FL+ S+ A+ FA+ RPPGIYK +Y++ L+ Y +
Sbjct: 122 IGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIE 181
Query: 264 LDSTPCPSTPEWKRELDLNGEAVPDDDDDGVP----------------AAALHENNEGRG 307
++ P P P+W E + + D D P A E +G
Sbjct: 182 -EAPPPPVLPDWCFEDEDEEDEDEDGKKDSEPGSSASFSKRRKERLKLGAIFLEGITVKG 240
Query: 308 NMQ------------------------FPGSHPVSLNSDNLQLLRQRYYYATWKADGTRY 343
Q FPG+ PVS++ N++LL Q+ Y +WKADGTRY
Sbjct: 241 VTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRY 300
Query: 344 MMLI-TIDGCYLIDRCFN-FRRVQMRFPCRNSNEGLGEKTHHF--TLLDGEMIIDKLPDS 399
MMLI + ++IDR + F + FP R + H TLLDGEMIIDK+ +
Sbjct: 301 MMLIDGTNEVFMIDRDNSVFHVSNLEFPFRK------DLRMHLSNTLLDGEMIIDKV--N 352
Query: 400 RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLE 459
+ RYLIYD++ N V + F R + +E+E+I PR+ + + E
Sbjct: 353 GQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMKTGLIDKT------QE 406
Query: 460 PFRVRRKDFWLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMN 518
PF VR K F+ ++ KLL+ F ++SH+ DGL+FQ Y P + +LKWK +N
Sbjct: 407 PFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIGK-YKPGRCDDILKWKPPSLN 465
Query: 519 SVDFLFEVT--------DDDRQLLYV--FERGKKKLMEGSSVEFTDREPSFYSGKIIECT 568
SVDF ++T + LLYV +ER ++ +E Y KIIEC
Sbjct: 466 SVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIK-------VTKELKQYDNKIIECK 518
Query: 569 WDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEI 614
++ + W MR R DKS PN NT V SI + +T+E+L I
Sbjct: 519 FENNS--WVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEFI 562
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Bifunctional mRNA-capping enzyme exhibiting RNA 5'-triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. Mus musculus (taxid: 10090) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 5EC: 0 |
| >sp|O60942|MCE1_HUMAN mRNA-capping enzyme OS=Homo sapiens GN=RNGTT PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6NY98|MCE1_DANRE mRNA-capping enzyme OS=Danio rerio GN=rngtt PE=2 SV=1 | Back alignment and function description |
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| >sp|Q17607|MCE1_CAEEL mRNA-capping enzyme OS=Caenorhabditis elegans GN=cel-1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P40997|MCE1_SCHPO mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ceg1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6FQ31|MCE1_CANGA mRNA-capping enzyme subunit alpha OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CEG1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7SB53|MCE1_NEUCR mRNA-capping enzyme subunit alpha OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06260 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6CWR0|MCE1_KLULA mRNA-capping enzyme subunit alpha OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CEG1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q01159|MCE1_YEAST mRNA-capping enzyme subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CEG1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P78587|MCE1_CANAX mRNA-capping enzyme subunit alpha OS=Candida albicans GN=CGT1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 643 | ||||||
| 356504293 | 684 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.998 | 0.938 | 0.760 | 0.0 | |
| 356496154 | 683 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.996 | 0.938 | 0.762 | 0.0 | |
| 225440606 | 677 | PREDICTED: mRNA-capping enzyme [Vitis vi | 0.989 | 0.939 | 0.732 | 0.0 | |
| 224087675 | 686 | predicted protein [Populus trichocarpa] | 0.998 | 0.935 | 0.726 | 0.0 | |
| 356520983 | 678 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.992 | 0.941 | 0.720 | 0.0 | |
| 357468627 | 684 | mRNA-capping enzyme [Medicago truncatula | 0.990 | 0.931 | 0.743 | 0.0 | |
| 356568041 | 681 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.993 | 0.938 | 0.732 | 0.0 | |
| 449460315 | 682 | PREDICTED: mRNA-capping enzyme-like [Cuc | 0.996 | 0.939 | 0.719 | 0.0 | |
| 357468629 | 579 | mRNA-capping enzyme [Medicago truncatula | 0.838 | 0.930 | 0.758 | 0.0 | |
| 42572335 | 672 | mRNA capping enzyme-like protein [Arabid | 0.975 | 0.933 | 0.659 | 0.0 |
| >gi|356504293|ref|XP_003520931.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/685 (76%), Positives = 574/685 (83%), Gaps = 43/685 (6%)
Query: 1 MIGAMDLNASPLPEEDEDTFEG--HIEEY-AAQERIESGAEILRREREERRRRLKRDRPD 57
MI AMDLNASP+PEEDED FE H+EE+ +ERIE+GA+I RREREER+RRLKR+RPD
Sbjct: 1 MIVAMDLNASPVPEEDEDIFEEKIHVEEFHEPEERIETGADIARREREERKRRLKRERPD 60
Query: 58 DRPVHAYQPAMHDQYYQNKNYKSYDRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFND 117
DRPVH Q +DQ + KN +SYD+++LPPGWLDCP GQEI C+IPSKVPL E FND
Sbjct: 61 DRPVHVSQSHAYDQLFHTKNQRSYDKSRLPPGWLDCPSSGQEIC-CMIPSKVPLGESFND 119
Query: 118 CIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAV 177
CIPPGKRYSFKQVIHQ RVLGRKLGLVIDLTNTTRYYP SDLKKE IKHVKIQC+GR++V
Sbjct: 120 CIPPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKECIKHVKIQCRGRNSV 179
Query: 178 PDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKK 237
PDN SVN FVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMI+H+LMR+ SMSV QAIK
Sbjct: 180 PDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKI 239
Query: 238 FAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR--ELDLNGEAVPDDDDDGVP 295
F+E R PGIYK +YI+ALYTFYHEK+ + CP TPEWKR E DLNGEAVPDDDDDGVP
Sbjct: 240 FSEARTPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVP 299
Query: 296 AAALHENNE------------------------------------GRGNMQFPGSHPVSL 319
L EN+E RG+ QFPGSHPVSL
Sbjct: 300 DPDLQENHETDTRMTNDDVLGDEIPTDQQDALRQFCYQTLKLGVGARGHTQFPGSHPVSL 359
Query: 320 NSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGE 379
N DNLQLLRQRYYYATWKADGTRYMMLIT+DGCYLIDR FNFRRVQMRFPCR++N+GLGE
Sbjct: 360 NRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGE 419
Query: 380 KTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPR 439
KTHHFTLLDGEM+ID LPDS++QERRYLIYDMMAINQ S+IERPFYERWKMLEKEVIEPR
Sbjct: 420 KTHHFTLLDGEMVIDTLPDSQKQERRYLIYDMMAINQVSIIERPFYERWKMLEKEVIEPR 479
Query: 440 NYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDD 499
N+ERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTV KLLKEFI +LSH+ADGL+FQGWDD
Sbjct: 480 NHERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDD 539
Query: 500 PYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTD-REPS 558
PY+PRTHEGLLKWKYA +NSVDFLFEV D DR+LL++ ERGKKKL+EG+ VEFTD +PS
Sbjct: 540 PYIPRTHEGLLKWKYAYLNSVDFLFEVVDGDRELLFLNERGKKKLLEGNRVEFTDGSDPS 599
Query: 559 FYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEII 618
YSGKIIEC+WD D WK MRIRTDKSTPN+ NTYRKV+RSIRDNITEE LLNEI EII
Sbjct: 600 LYSGKIIECSWDFDKLEWKYMRIRTDKSTPNEFNTYRKVLRSIRDNITEEDLLNEISEII 659
Query: 619 RLPMYADRIRNDSKAHLHTSSARRR 643
RLPMYADRIR DSKA+ H + ARRR
Sbjct: 660 RLPMYADRIRIDSKANQHANVARRR 684
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496154|ref|XP_003516935.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225440606|ref|XP_002277969.1| PREDICTED: mRNA-capping enzyme [Vitis vinifera] gi|297740251|emb|CBI30433.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224087675|ref|XP_002308205.1| predicted protein [Populus trichocarpa] gi|222854181|gb|EEE91728.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356520983|ref|XP_003529138.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357468627|ref|XP_003604598.1| mRNA-capping enzyme [Medicago truncatula] gi|355505653|gb|AES86795.1| mRNA-capping enzyme [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356568041|ref|XP_003552222.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449460315|ref|XP_004147891.1| PREDICTED: mRNA-capping enzyme-like [Cucumis sativus] gi|449506444|ref|XP_004162751.1| PREDICTED: mRNA-capping enzyme-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357468629|ref|XP_003604599.1| mRNA-capping enzyme [Medicago truncatula] gi|355505654|gb|AES86796.1| mRNA-capping enzyme [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|42572335|ref|NP_974263.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] gi|332641202|gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 643 | ||||||
| TAIR|locus:2095284 | 672 | AT3G09100 [Arabidopsis thalian | 0.508 | 0.486 | 0.744 | 4.3e-237 | |
| TAIR|locus:2150154 | 657 | AT5G01290 [Arabidopsis thalian | 0.506 | 0.496 | 0.705 | 1.8e-218 | |
| TAIR|locus:2147575 | 625 | AT5G28210 [Arabidopsis thalian | 0.510 | 0.524 | 0.551 | 5.7e-165 | |
| UNIPROTKB|E2R9G2 | 597 | RNGTT "Uncharacterized protein | 0.446 | 0.480 | 0.380 | 1.4e-76 | |
| UNIPROTKB|Q2KHX7 | 595 | RNGTT "RNA guanylyltransferase | 0.446 | 0.482 | 0.377 | 4e-76 | |
| UNIPROTKB|O60942 | 597 | RNGTT "mRNA-capping enzyme" [H | 0.446 | 0.480 | 0.377 | 6.5e-76 | |
| UNIPROTKB|E1C254 | 600 | RNGTT "Uncharacterized protein | 0.441 | 0.473 | 0.380 | 8.8e-76 | |
| RGD|1311410 | 597 | Rngtt "RNA guanylyltransferase | 0.446 | 0.480 | 0.380 | 4.5e-75 | |
| ZFIN|ZDB-GENE-040426-2087 | 598 | rngtt "RNA guanylyltransferase | 0.438 | 0.471 | 0.379 | 1.1e-74 | |
| MGI|MGI:1329041 | 597 | Rngtt "RNA guanylyltransferase | 0.446 | 0.480 | 0.377 | 1.8e-74 |
| TAIR|locus:2095284 AT3G09100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1338 (476.1 bits), Expect = 4.3e-237, Sum P(2) = 4.3e-237
Identities = 248/333 (74%), Positives = 284/333 (85%)
Query: 302 NNEGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNF 361
N GRG QFPGSHPVSLN +NLQLLRQRYYYATWKADGTRYMML+T DGCY++DR F F
Sbjct: 341 NIGGRGCSQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLLTTDGCYIVDRSFRF 400
Query: 362 RRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIE 421
RRVQMRFP R+ EG+ +K HHFTLLDGEMIID LPD ++QERRYLIYDM+AIN SV+E
Sbjct: 401 RRVQMRFPFRHPTEGISDKVHHFTLLDGEMIIDTLPDKQKQERRYLIYDMVAINGQSVVE 460
Query: 422 RPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF 481
RPFYERWKMLEKEVI+PRN+E+ +R+ YRYDLEPFRVRRKDFWLLS V K+LK F
Sbjct: 461 RPFYERWKMLEKEVIDPRNHEK-----ARSHIYRYDLEPFRVRRKDFWLLSAVEKVLKGF 515
Query: 482 IPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGK 541
IP LSH+ADGL+FQGWDDPYVPRTHEGLLKWKY MNSVDFL+E + R +L +FERGK
Sbjct: 516 IPSLSHEADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLYEQDESGRGMLSLFERGK 575
Query: 542 KKLMEGSSVEFTD-REPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRS 600
KK M+G+SV F D +P+ YSGKI+EC+WD D ++W MR+R DKSTPNDINT+RKVMRS
Sbjct: 576 KKHMDGNSVVFRDDSDPAEYSGKIVECSWDQDEKVWVSMRVRVDKSTPNDINTFRKVMRS 635
Query: 601 IRDNITEEVLLNEIQEIIRLPMYADRIRNDSKA 633
I+DNITEEVLL EI+EIIRLPMYADRI+ DSKA
Sbjct: 636 IKDNITEEVLLQEIREIIRLPMYADRIQMDSKA 668
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| TAIR|locus:2150154 AT5G01290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2147575 AT5G28210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R9G2 RNGTT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2KHX7 RNGTT "RNA guanylyltransferase and 5'-phosphatase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O60942 RNGTT "mRNA-capping enzyme" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C254 RNGTT "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|1311410 Rngtt "RNA guanylyltransferase and 5'-phosphatase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2087 rngtt "RNA guanylyltransferase and 5'-phosphatase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:1329041 Rngtt "RNA guanylyltransferase and 5'-phosphatase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q17607 | MCE1_CAEEL | 2, ., 7, ., 7, ., 5, 0 | 0.3083 | 0.8087 | 0.8346 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.691 |
| 3rd Layer | 2.7.7 | 0.691 |
| 3rd Layer | 3.1.3.16 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.33 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.7.7.50 | 0.737 |
| 3rd Layer | 3.1.3.48 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 643 | |||
| cd07895 | 215 | cd07895, Adenylation_mRNA_capping, Adenylation dom | 1e-86 | |
| pfam01331 | 193 | pfam01331, mRNA_cap_enzyme, mRNA capping enzyme, c | 6e-82 | |
| COG5226 | 404 | COG5226, CEG1, mRNA capping enzyme, guanylyltransf | 1e-51 | |
| pfam03919 | 105 | pfam03919, mRNA_cap_C, mRNA capping enzyme, C-term | 9e-30 | |
| cd06846 | 182 | cd06846, Adenylation_DNA_ligase_like, Adenylation | 7e-13 | |
| smart00195 | 138 | smart00195, DSPc, Dual specificity phosphatase, ca | 2e-10 | |
| pfam00782 | 131 | pfam00782, DSPc, Dual specificity phosphatase, cat | 1e-08 | |
| cd00127 | 139 | cd00127, DSPc, Dual specificity phosphatases (DSP) | 1e-07 | |
| COG2453 | 180 | COG2453, CDC14, Predicted protein-tyrosine phospha | 3e-04 |
| >gnl|CDD|185706 cd07895, Adenylation_mRNA_capping, Adenylation domain of GTP-dependent mRNA capping enzymes | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 1e-86
Identities = 97/217 (44%), Positives = 125/217 (57%), Gaps = 12/217 (5%)
Query: 299 LHENNEGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITI-DGCYLIDR 357
+ E G FPGS PVS + NL+LL+Q Y+ K+DG RY++LIT YLIDR
Sbjct: 10 VAELCPGWERGGFPGSQPVSFSRKNLELLKQNDYFVCEKSDGVRYLLLITGRGEVYLIDR 69
Query: 358 CFNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQA 417
+ +V F R N E H TLLDGE++IDK+P + RYLI+D++A N
Sbjct: 70 KNDVFKVPGLFFPRRKNL---EPHHQGTLLDGELVIDKVPGK--KRPRYLIFDILAFNGQ 124
Query: 418 SVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKL 477
SV E+P ER K ++KEVIEPRN EPF VR KDF+ L + KL
Sbjct: 125 SVTEKPLSERLKYIKKEVIEPRNELLKK------GPIDKAKEPFSVRLKDFFPLYKIEKL 178
Query: 478 LKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKY 514
++ IPKL H+ DGL+F D+PYVP T + LLKWK
Sbjct: 179 FEKIIPKLPHENDGLIFTPNDEPYVPGTDKNLLKWKP 215
|
RNA capping enzymes transfer GMP from GTP to the 5'-diphosphate end of nascent mRNAs to form a G(5')ppp(5')RNA cap structure. The RNA cap is found only in eukarya. RNA capping is chemically analogous to the first two steps of polynucleotide ligation. ATP-dependent polynucleotide ligases catalyze phosphodiester bond formation of nicked nucleic acid substrates using the high energy nucleotide of ATP as a cofactor in a three step reaction mechanism. Structural studies reveal a shared structure for DNA ligases and capping enzymes, with a common catalytic core composed of an adenylation or nucleotidyltransferase domain and a C-terminal OB-fold domain containing conserved sequence motifs. The adenylation domain binds ATP and contains many active site residues. Length = 215 |
| >gnl|CDD|216438 pfam01331, mRNA_cap_enzyme, mRNA capping enzyme, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|227551 COG5226, CEG1, mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >gnl|CDD|217793 pfam03919, mRNA_cap_C, mRNA capping enzyme, C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|185704 cd06846, Adenylation_DNA_ligase_like, Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases | Back alignment and domain information |
|---|
| >gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
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| >gnl|CDD|216117 pfam00782, DSPc, Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
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| >gnl|CDD|238073 cd00127, DSPc, Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >gnl|CDD|225297 COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 643 | |||
| COG5226 | 404 | CEG1 mRNA capping enzyme, guanylyltransferase (alp | 100.0 | |
| KOG2386 | 393 | consensus mRNA capping enzyme, guanylyltransferase | 100.0 | |
| PF01331 | 192 | mRNA_cap_enzyme: mRNA capping enzyme, catalytic do | 100.0 | |
| cd07895 | 215 | Adenylation_mRNA_capping Adenylation domain of GTP | 100.0 | |
| cd06846 | 182 | Adenylation_DNA_ligase_like Adenylation domain of | 99.95 | |
| KOG1719 | 183 | consensus Dual specificity phosphatase [Defense me | 99.93 | |
| cd07898 | 201 | Adenylation_DNA_ligase Adenylation domain of ATP-d | 99.92 | |
| PTZ00242 | 166 | protein tyrosine phosphatase; Provisional | 99.91 | |
| cd07903 | 225 | Adenylation_DNA_ligase_IV Adenylation domain of DN | 99.9 | |
| PTZ00393 | 241 | protein tyrosine phosphatase; Provisional | 99.9 | |
| cd07897 | 207 | Adenylation_DNA_ligase_Bac1 Adenylation domain of | 99.88 | |
| KOG1720 | 225 | consensus Protein tyrosine phosphatase CDC14 [Defe | 99.88 | |
| PRK09247 | 539 | ATP-dependent DNA ligase; Validated | 99.88 | |
| cd07901 | 207 | Adenylation_DNA_ligase_Arch_LigB Adenylation domai | 99.87 | |
| cd07906 | 190 | Adenylation_DNA_ligase_LigD_LigC Adenylation domai | 99.87 | |
| cd07900 | 219 | Adenylation_DNA_ligase_I_Euk Adenylation domain of | 99.87 | |
| cd07905 | 194 | Adenylation_DNA_ligase_LigC Adenylation domain of | 99.86 | |
| PF03919 | 105 | mRNA_cap_C: mRNA capping enzyme, C-terminal domain | 99.85 | |
| cd08039 | 235 | Adenylation_DNA_ligase_Fungal Adenylation domain o | 99.85 | |
| PRK07636 | 275 | ligB ATP-dependent DNA ligase; Reviewed | 99.85 | |
| TIGR02779 | 298 | NHEJ_ligase_lig DNA polymerase LigD, ligase domain | 99.85 | |
| PRK08224 | 350 | ligC ATP-dependent DNA ligase; Reviewed | 99.85 | |
| cd07902 | 213 | Adenylation_DNA_ligase_III Adenylation domain of D | 99.84 | |
| PRK09633 | 610 | ligD ATP-dependent DNA ligase; Reviewed | 99.84 | |
| PHA02587 | 488 | 30 DNA ligase; Provisional | 99.84 | |
| TIGR00574 | 514 | dnl1 DNA ligase I, ATP-dependent (dnl1). All prote | 99.84 | |
| PRK03180 | 508 | ligB ATP-dependent DNA ligase; Reviewed | 99.82 | |
| cd09232 | 186 | Snurportin-1_C C-terminal m3G cap-binding domain o | 99.82 | |
| smart00195 | 138 | DSPc Dual specificity phosphatase, catalytic domai | 99.81 | |
| PLN03113 | 744 | DNA ligase 1; Provisional | 99.81 | |
| PRK01109 | 590 | ATP-dependent DNA ligase; Provisional | 99.81 | |
| PF00782 | 133 | DSPc: Dual specificity phosphatase, catalytic doma | 99.81 | |
| PF01068 | 202 | DNA_ligase_A_M: ATP dependent DNA ligase domain; I | 99.81 | |
| PRK09632 | 764 | ATP-dependent DNA ligase; Reviewed | 99.79 | |
| COG1793 | 444 | CDC9 ATP-dependent DNA ligase [DNA replication, re | 99.78 | |
| PRK05972 | 860 | ligD ATP-dependent DNA ligase; Reviewed | 99.78 | |
| PHA00454 | 315 | ATP-dependent DNA ligase | 99.78 | |
| KOG1718 | 198 | consensus Dual specificity phosphatase [Defense me | 99.77 | |
| cd00127 | 139 | DSPc Dual specificity phosphatases (DSP); Ser/Thr | 99.75 | |
| PRK09125 | 282 | DNA ligase; Provisional | 99.75 | |
| cd07896 | 174 | Adenylation_kDNA_ligase_like Adenylation domain of | 99.72 | |
| KOG2836 | 173 | consensus Protein tyrosine phosphatase IVA1 [Signa | 99.7 | |
| PRK12361 | 547 | hypothetical protein; Provisional | 99.67 | |
| KOG1717 | 343 | consensus Dual specificity phosphatase [Defense me | 99.66 | |
| KOG1716 | 285 | consensus Dual specificity phosphatase [Defense me | 99.65 | |
| KOG0966 | 881 | consensus ATP-dependent DNA ligase IV [Replication | 99.57 | |
| TIGR02776 | 552 | NHEJ_ligase_prk DNA ligase D. Members of this prot | 99.57 | |
| KOG2386 | 393 | consensus mRNA capping enzyme, guanylyltransferase | 99.55 | |
| KOG2283 | 434 | consensus Clathrin coat dissociation kinase GAK/PT | 99.5 | |
| COG2453 | 180 | CDC14 Predicted protein-tyrosine phosphatase [Sign | 99.46 | |
| KOG0967 | 714 | consensus ATP-dependent DNA ligase I [Replication, | 99.35 | |
| PF03162 | 164 | Y_phosphatase2: Tyrosine phosphatase family; Inter | 99.31 | |
| PF05706 | 168 | CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3) | 99.18 | |
| cd07894 | 342 | Adenylation_RNA_ligase Adenylation domain of RNA c | 99.14 | |
| smart00404 | 105 | PTPc_motif Protein tyrosine phosphatase, catalytic | 99.09 | |
| smart00012 | 105 | PTPc_DSPc Protein tyrosine phosphatase, catalytic | 99.09 | |
| TIGR01244 | 135 | conserved hypothetical protein TIGR01244. No membe | 98.94 | |
| cd00047 | 231 | PTPc Protein tyrosine phosphatases (PTP) catalyze | 98.83 | |
| PRK15375 | 535 | pathogenicity island 1 effector protein StpP; Prov | 98.73 | |
| PLN02727 | 986 | NAD kinase | 98.73 | |
| smart00194 | 258 | PTPc Protein tyrosine phosphatase, catalytic domai | 98.68 | |
| KOG1572 | 249 | consensus Predicted protein tyrosine phosphatase [ | 98.41 | |
| PHA02740 | 298 | protein tyrosine phosphatase; Provisional | 98.35 | |
| PF14566 | 149 | PTPlike_phytase: Inositol hexakisphosphate; PDB: 1 | 98.34 | |
| PF04273 | 110 | DUF442: Putative phosphatase (DUF442); InterPro: I | 98.33 | |
| PF13350 | 164 | Y_phosphatase3: Tyrosine phosphatase family; PDB: | 98.29 | |
| PHA02742 | 303 | protein tyrosine phosphatase; Provisional | 98.26 | |
| PF00102 | 235 | Y_phosphatase: Protein-tyrosine phosphatase; Inter | 98.26 | |
| PHA02747 | 312 | protein tyrosine phosphatase; Provisional | 98.25 | |
| PHA02746 | 323 | protein tyrosine phosphatase; Provisional | 98.2 | |
| PHA02738 | 320 | hypothetical protein; Provisional | 98.02 | |
| KOG3132 | 325 | consensus m3G-cap-specific nuclear import receptor | 97.99 | |
| COG2365 | 249 | Protein tyrosine/serine phosphatase [Signal transd | 97.96 | |
| KOG0790 | 600 | consensus Protein tyrosine phosphatase Corkscrew a | 97.9 | |
| COG3453 | 130 | Uncharacterized protein conserved in bacteria [Fun | 97.83 | |
| KOG0792 | 1144 | consensus Protein tyrosine phosphatase PTPMEG, con | 97.69 | |
| TIGR01209 | 374 | RNA ligase, Pab1020 family. Members of this family | 97.63 | |
| COG5599 | 302 | PTP2 Protein tyrosine phosphatase [Signal transduc | 97.57 | |
| KOG0791 | 374 | consensus Protein tyrosine phosphatase, contains f | 97.41 | |
| COG5350 | 172 | Predicted protein tyrosine phosphatase [General fu | 97.28 | |
| KOG0789 | 415 | consensus Protein tyrosine phosphatase [Signal tra | 97.16 | |
| COG1423 | 382 | ATP-dependent DNA ligase, homolog of eukaryotic li | 97.08 | |
| KOG0793 | 1004 | consensus Protein tyrosine phosphatase [Signal tra | 96.54 | |
| PF14671 | 141 | DSPn: Dual specificity protein phosphatase, N-term | 96.14 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 94.79 | |
| PF04179 | 451 | Init_tRNA_PT: Initiator tRNA phosphoribosyl transf | 93.96 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 93.88 | |
| PF01653 | 315 | DNA_ligase_aden: NAD-dependent DNA ligase adenylat | 93.84 | |
| PF09414 | 186 | RNA_ligase: RNA ligase; InterPro: IPR021122 This e | 92.67 | |
| cd00114 | 307 | LIGANc NAD+ dependent DNA ligase adenylation domai | 92.41 | |
| PRK07956 | 665 | ligA NAD-dependent DNA ligase LigA; Validated | 92.06 | |
| PF05098 | 450 | LEF-4: Late expression factor 4 (LEF-4); InterPro: | 91.99 | |
| KOG3673 | 845 | consensus FtsJ-like RNA methyltransferase [RNA pro | 91.78 | |
| TIGR02307 | 325 | RNA_lig_RNL2 RNA ligase, Rnl2 family. Members of t | 91.09 | |
| PRK14350 | 669 | ligA NAD-dependent DNA ligase LigA; Provisional | 90.78 | |
| TIGR00575 | 652 | dnlj DNA ligase, NAD-dependent. The member of this | 90.42 | |
| smart00532 | 441 | LIGANc Ligase N family. | 90.25 | |
| PRK08097 | 562 | ligB NAD-dependent DNA ligase LigB; Reviewed | 89.99 | |
| PHA02142 | 366 | putative RNA ligase | 89.72 | |
| PRK14351 | 689 | ligA NAD-dependent DNA ligase LigA; Provisional | 87.97 | |
| cd01518 | 101 | RHOD_YceA Member of the Rhodanese Homology Domain | 87.04 | |
| PLN02160 | 136 | thiosulfate sulfurtransferase | 80.58 |
| >COG5226 CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-60 Score=472.91 Aligned_cols=299 Identities=34% Similarity=0.487 Sum_probs=248.7
Q ss_pred CCCCCCcccccchhhhhhhcccceeeeecCceeEEEEEEECC------EEEEEeCCCccccccC-CCCCcCCc-cccccc
Q 006472 309 MQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITID------GCYLIDRCFNFRRVQM-RFPCRNSN-EGLGEK 380 (643)
Q Consensus 309 ~~FPGsqPVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~~~------~vyLidR~~~~~~v~~-~FP~~~~~-~~~~~~ 380 (643)
..|||||||||+.+|++.|..++|+||||+||+|+||+++.+ ++|++||+|+||.+.- .||+.... +| +.
T Consensus 41 ~tFpGsqPVsf~~~~i~~Ll~~dy~VCEKsDGvR~Ll~vte~p~tg~~~~y~~DR~nnfY~v~~~f~p~~~~~k~g--e~ 118 (404)
T COG5226 41 ETFPGSQPVSFTLDNIGLLLNNDYLVCEKSDGVRALLLVTEEPVTGAFRGYFYDRRNNFYEVHTSFPPCSTVLKDG--EV 118 (404)
T ss_pred ccCCCCcceeeehhhHHHHHhCCeEEEEccCCeEEEEEEEecccCCCcceEEEeccCceEEeccccCCcccccccC--cE
Confidence 679999999999999999999999999999999999999853 6999999999998864 44533221 22 35
Q ss_pred CCCCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCC
Q 006472 381 THHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEP 460 (643)
Q Consensus 381 ~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~p 460 (643)
.+.+|+||||+|.|..+.++-++++|++||||+++|.-++.++.++|++.|++++.+|+...+. +-..+....|
T Consensus 119 l~~dtlldgelV~d~~p~~k~~qlryl~fdcLa~~g~~~~~~~~s~Rl~~l~Ke~~kp~~~~r~------s~~~~~~~fp 192 (404)
T COG5226 119 LLEDTLLDGELVFDCLPYEKVPQLRYLLFDCLAYAGMFVERMEKSERLKTLQKEDEKPRERKRV------SIEIDSGSFP 192 (404)
T ss_pred EeccceecceEEEEeccccchHHHHHHHHHHhhhcceeEeecchhhHHHHhhhhhcccHhhhhh------eeeccccccc
Confidence 6899999999999988766546899999999999999999999999999999999999755442 1112334678
Q ss_pred cEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecC-----------
Q 006472 461 FRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDD----------- 529 (643)
Q Consensus 461 f~I~~K~~~~~~~~~~ll~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~~~nTvDF~l~~~~~----------- 529 (643)
|.+.+|.+...+++-++++. +|.+.|++|||||||.+.||..|++..+|||||.++|||||++.+...
T Consensus 193 f~~s~K~M~~syg~~ki~k~-ip~L~HgnDGLIFTp~~~PY~~Gkd~~lLKWKP~~~NTiDF~lvl~~~~~e~~Dyny~~ 271 (404)
T COG5226 193 FHFSVKQMLKSYGFWKIYKK-IPELKHGNDGLIFTPADEPYSVGKDGALLKWKPASLNTIDFRLVLHKKWSEVDDYNYVC 271 (404)
T ss_pred eeeeHHHHHhhhhHHHHHhh-cccccCCCCceEeccCCCCcccCccceeeecCccccCceeeeeeeccccccccCcceee
Confidence 99999999999999999964 799999999999999999999999999999999999999999977621
Q ss_pred -CceeEEEEeCCeee-eecCceeEecC-------CCCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHHHHHh
Q 006472 530 -DRQLLYVFERGKKK-LMEGSSVEFTD-------REPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRS 600 (643)
Q Consensus 530 -~~~~L~~~~~g~~~-~~~~~~~~f~~-------~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~S 600 (643)
....|+|+.+.+.. ++.... ..| ..-..+.++||||+.+. .|.|+++|+|+||.+|||++||.+|++|
T Consensus 272 ~p~f~l~Vw~gRk~yrfFa~~~--v~d~ew~~lk~~~~pl~~rivEc~l~~-e~~W~~lrfRdDK~~~NhisvV~~VLeS 348 (404)
T COG5226 272 SPKFGLDVWFGRKTYRFFASGE--VIDGEWCELKYDCDPLYWRIVECVLKK-EGAWKLLRFRDDKDTPNHISVVCNVLES 348 (404)
T ss_pred cccccccEEecccceeeeeeeE--echHHHHHHhhhcccchhhHHHHHhcc-CCceEEEEeecCCCCCchhhHHHHHHHH
Confidence 23467777754433 222211 112 33457899999999985 4589999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHhc
Q 006472 601 IRDNITEEVLLNEIQEIIR 619 (643)
Q Consensus 601 I~~~It~e~Ll~~i~~i~~ 619 (643)
|+|+||.|+|.....-|+.
T Consensus 349 i~D~vs~EdL~~~~~vire 367 (404)
T COG5226 349 IRDNVSIEDLSTFYSVIRE 367 (404)
T ss_pred HhccCcHHHHHHHHHHHHH
Confidence 9999999999998877654
|
|
| >KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF01331 mRNA_cap_enzyme: mRNA capping enzyme, catalytic domain; InterPro: IPR001339 The mRNA capping enzyme in yeasts is composed of two separate chains, alpha a mRNA guanyltransferase and beta an RNA 5'-triphosphate | Back alignment and domain information |
|---|
| >cd07895 Adenylation_mRNA_capping Adenylation domain of GTP-dependent mRNA capping enzymes | Back alignment and domain information |
|---|
| >cd06846 Adenylation_DNA_ligase_like Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases | Back alignment and domain information |
|---|
| >KOG1719 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd07898 Adenylation_DNA_ligase Adenylation domain of ATP-dependent DNA Ligases | Back alignment and domain information |
|---|
| >PTZ00242 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >cd07903 Adenylation_DNA_ligase_IV Adenylation domain of DNA Ligase IV | Back alignment and domain information |
|---|
| >PTZ00393 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >cd07897 Adenylation_DNA_ligase_Bac1 Adenylation domain of putative bacterial ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >KOG1720 consensus Protein tyrosine phosphatase CDC14 [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK09247 ATP-dependent DNA ligase; Validated | Back alignment and domain information |
|---|
| >cd07901 Adenylation_DNA_ligase_Arch_LigB Adenylation domain of archaeal and bacterial LigB-like DNA ligases | Back alignment and domain information |
|---|
| >cd07906 Adenylation_DNA_ligase_LigD_LigC Adenylation domain of Mycobacterium tuberculosis LigD and LigC-like ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >cd07900 Adenylation_DNA_ligase_I_Euk Adenylation domain of eukaryotic DNA Ligase I | Back alignment and domain information |
|---|
| >cd07905 Adenylation_DNA_ligase_LigC Adenylation domain of Mycobacterium tuberculosis LigC-like ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >PF03919 mRNA_cap_C: mRNA capping enzyme, C-terminal domain; InterPro: IPR013846 This domain is found at the C terminus of the mRNA capping enzyme | Back alignment and domain information |
|---|
| >cd08039 Adenylation_DNA_ligase_Fungal Adenylation domain of uncharacterized fungal ATP-dependent DNA ligase-like proteins | Back alignment and domain information |
|---|
| >PRK07636 ligB ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02779 NHEJ_ligase_lig DNA polymerase LigD, ligase domain | Back alignment and domain information |
|---|
| >PRK08224 ligC ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >cd07902 Adenylation_DNA_ligase_III Adenylation domain of DNA Ligase III | Back alignment and domain information |
|---|
| >PRK09633 ligD ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PHA02587 30 DNA ligase; Provisional | Back alignment and domain information |
|---|
| >TIGR00574 dnl1 DNA ligase I, ATP-dependent (dnl1) | Back alignment and domain information |
|---|
| >PRK03180 ligB ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >cd09232 Snurportin-1_C C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1 | Back alignment and domain information |
|---|
| >smart00195 DSPc Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PLN03113 DNA ligase 1; Provisional | Back alignment and domain information |
|---|
| >PRK01109 ATP-dependent DNA ligase; Provisional | Back alignment and domain information |
|---|
| >PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PF01068 DNA_ligase_A_M: ATP dependent DNA ligase domain; InterPro: IPR012310 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalysing the formation of an internucleotide ester bond between phosphate and deoxyribose | Back alignment and domain information |
|---|
| >PRK09632 ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >COG1793 CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK05972 ligD ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PHA00454 ATP-dependent DNA ligase | Back alignment and domain information |
|---|
| >KOG1718 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >PRK09125 DNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd07896 Adenylation_kDNA_ligase_like Adenylation domain of kDNA ligases and similar proteins | Back alignment and domain information |
|---|
| >KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK12361 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1717 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1716 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR02776 NHEJ_ligase_prk DNA ligase D | Back alignment and domain information |
|---|
| >KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
| >COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0967 consensus ATP-dependent DNA ligase I [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species | Back alignment and domain information |
|---|
| >cd07894 Adenylation_RNA_ligase Adenylation domain of RNA circularization proteins | Back alignment and domain information |
|---|
| >smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif | Back alignment and domain information |
|---|
| >smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity | Back alignment and domain information |
|---|
| >TIGR01244 conserved hypothetical protein TIGR01244 | Back alignment and domain information |
|---|
| >cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways | Back alignment and domain information |
|---|
| >PRK15375 pathogenicity island 1 effector protein StpP; Provisional | Back alignment and domain information |
|---|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
| >smart00194 PTPc Protein tyrosine phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >KOG1572 consensus Predicted protein tyrosine phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PHA02740 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B | Back alignment and domain information |
|---|
| >PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function | Back alignment and domain information |
|---|
| >PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B | Back alignment and domain information |
|---|
| >PHA02742 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PHA02747 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02746 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02738 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG3132 consensus m3G-cap-specific nuclear import receptor (Snurportin1) [RNA processing and modification] | Back alignment and domain information |
|---|
| >COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0790 consensus Protein tyrosine phosphatase Corkscrew and related SH2 domain enzymes [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3453 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0792 consensus Protein tyrosine phosphatase PTPMEG, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01209 RNA ligase, Pab1020 family | Back alignment and domain information |
|---|
| >COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0791 consensus Protein tyrosine phosphatase, contains fn3 domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5350 Predicted protein tyrosine phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0789 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1423 ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0793 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF14671 DSPn: Dual specificity protein phosphatase, N-terminal half; PDB: 1OHD_A 1OHE_A 1OHC_A | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04179 Init_tRNA_PT: Initiator tRNA phosphoribosyl transferase ; InterPro: IPR007306 This enzyme (2 | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF01653 DNA_ligase_aden: NAD-dependent DNA ligase adenylation domain; InterPro: IPR013839 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose | Back alignment and domain information |
|---|
| >PF09414 RNA_ligase: RNA ligase; InterPro: IPR021122 This entry represents the RNA ligase domain | Back alignment and domain information |
|---|
| >cd00114 LIGANc NAD+ dependent DNA ligase adenylation domain | Back alignment and domain information |
|---|
| >PRK07956 ligA NAD-dependent DNA ligase LigA; Validated | Back alignment and domain information |
|---|
| >PF05098 LEF-4: Late expression factor 4 (LEF-4); InterPro: IPR007790 The baculovirus Autographa californica nuclear polyhedrosis virus (AcMNPV) virus encodes a DNA-dependent RNA polymerase that is required for transcription of viral late genes | Back alignment and domain information |
|---|
| >KOG3673 consensus FtsJ-like RNA methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
| >TIGR02307 RNA_lig_RNL2 RNA ligase, Rnl2 family | Back alignment and domain information |
|---|
| >PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >TIGR00575 dnlj DNA ligase, NAD-dependent | Back alignment and domain information |
|---|
| >smart00532 LIGANc Ligase N family | Back alignment and domain information |
|---|
| >PRK08097 ligB NAD-dependent DNA ligase LigB; Reviewed | Back alignment and domain information |
|---|
| >PHA02142 putative RNA ligase | Back alignment and domain information |
|---|
| >PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
| >PLN02160 thiosulfate sulfurtransferase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 643 | ||||
| 3s24_A | 347 | Crystal Structure Of Human Mrna Guanylyltransferase | 6e-39 | ||
| 3rtx_A | 343 | Crystal Structure Of Mammalian Capping Enzyme (Mce1 | 8e-39 | ||
| 2c46_A | 241 | Crystal Structure Of The Human Rna Guanylyltransfer | 1e-36 | ||
| 1i9s_A | 210 | Crystal Structure Of The Rna Triphosphatase Domain | 4e-36 | ||
| 1i9t_A | 210 | Crystal Structure Of The Oxidized Rna Triphosphatas | 7e-35 | ||
| 3kyh_C | 461 | Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatu | 2e-28 | ||
| 1p16_A | 395 | Structure Of An Mrna Capping Enzyme Bound To The Ph | 3e-27 | ||
| 1ckm_A | 330 | Structure Of Two Different Conformations Of Mrna Ca | 4e-15 | ||
| 1yn9_A | 169 | Crystal Structure Of Baculovirus Rna 5'-Phosphatase | 1e-14 | ||
| 1ckn_B | 330 | Structure Of Guanylylated Mrna Capping Enzyme Compl | 2e-14 | ||
| 2i6i_A | 161 | Crystal Structures Of The Archaeal Sulfolobus Ptp-F | 3e-04 | ||
| 3rgo_A | 157 | Crystal Structure Of Ptpmt1 Length = 157 | 6e-04 |
| >pdb|3S24|A Chain A, Crystal Structure Of Human Mrna Guanylyltransferase Length = 347 | Back alignment and structure |
|
| >pdb|3RTX|A Chain A, Crystal Structure Of Mammalian Capping Enzyme (Mce1) And Pol Ii Ctd Complex Length = 343 | Back alignment and structure |
| >pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And 5'-Phosphatase Length = 241 | Back alignment and structure |
| >pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of Mouse Mrna Capping Enzyme Length = 210 | Back alignment and structure |
| >pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase Domain Of Mouse Mrna Capping Enzyme Length = 210 | Back alignment and structure |
| >pdb|3KYH|C Chain C, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus Length = 461 | Back alignment and structure |
| >pdb|1P16|A Chain A, Structure Of An Mrna Capping Enzyme Bound To The Phosphorylated Carboxyl-Terminal Domain Of Rna Polymerase Ii Length = 395 | Back alignment and structure |
| >pdb|1CKM|A Chain A, Structure Of Two Different Conformations Of Mrna Capping Enzyme In Complex With Gtp Length = 330 | Back alignment and structure |
| >pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase Complexed With Phosphate Length = 169 | Back alignment and structure |
| >pdb|1CKN|B Chain B, Structure Of Guanylylated Mrna Capping Enzyme Complexed With Gtp Length = 330 | Back alignment and structure |
| >pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold Phosphatase Length = 161 | Back alignment and structure |
| >pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1 Length = 157 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A Length = 241 | Back alignment and structure |
|---|
Score = 221 bits (564), Expect = 4e-68
Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 5/239 (2%)
Query: 62 HAYQPAMHDQYYQNKNYKSYDRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPP 121
H + + D +N ++S NK+PP WL+CP GQ + G +P K L ++ +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMAHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAE 63
Query: 122 GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA 181
R+ + + L+ L K+GL++DLTNT+R+Y +D++KEGIK++K+QCKG P
Sbjct: 64 ENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTE 123
Query: 182 SVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241
+ F+ +F R + I VHCTHG NRTG++I FL+ S+ A+ FA+
Sbjct: 124 NTETFIRLCERFNERNPP--ELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQA 181
Query: 242 RPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE--LDLNGEAVPDDDDDGVPAAA 298
RPPGIYK +Y++ L+ Y + ++ P P P+W E D + + + + +A+
Sbjct: 182 RPPGIYKGDYLKELFRRYGDIE-EAPPPPLLPDWCFEDDEDEDEDEDGKKESETGSSAS 239
|
| >1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B* Length = 330 | Back alignment and structure |
|---|
| >1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3 Length = 395 | Back alignment and structure |
|---|
| >3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A Length = 343 | Back alignment and structure |
|---|
| >3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae} Length = 461 | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} Length = 169 | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Length = 348 | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} Length = 167 | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Length = 157 | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* Length = 161 | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Length = 159 | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Length = 212 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A Length = 189 | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A Length = 339 | Back alignment and structure |
|---|
| >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} Length = 149 | Back alignment and structure |
|---|
| >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Length = 294 | Back alignment and structure |
|---|
| >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} Length = 145 | Back alignment and structure |
|---|
| >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
| >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} Length = 190 | Back alignment and structure |
|---|
| >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A Length = 144 | Back alignment and structure |
|---|
| >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A Length = 176 | Back alignment and structure |
|---|
| >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} Length = 161 | Back alignment and structure |
|---|
| >3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} Length = 144 | Back alignment and structure |
|---|
| >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Length = 188 | Back alignment and structure |
|---|
| >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} Length = 177 | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Length = 324 | Back alignment and structure |
|---|
| >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} Length = 164 | Back alignment and structure |
|---|
| >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} Length = 165 | Back alignment and structure |
|---|
| >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} Length = 160 | Back alignment and structure |
|---|
| >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A Length = 155 | Back alignment and structure |
|---|
| >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Length = 154 | Back alignment and structure |
|---|
| >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} Length = 195 | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} Length = 361 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 643 | |||
| 3rtx_A | 343 | MRNA-capping enzyme; guanylyltransferase, RNA poly | 100.0 | |
| 3kyh_C | 461 | MRNA-capping enzyme subunit alpha; 5' modification | 100.0 | |
| 1p16_A | 395 | GTP--RNA, mRNA capping enzyme alpha subunit; guany | 100.0 | |
| 1ckm_A | 330 | MRNA capping enzyme; nucleotidyltransferase; HET: | 100.0 | |
| 2c46_A | 241 | MRNA capping enzyme; phosphatase, transferase, hyd | 100.0 | |
| 1yn9_A | 169 | BVP, polynucleotide 5'-phosphatase; RNA triphospha | 100.0 | |
| 2cfm_A | 561 | Thermostable DNA ligase; protein-nucleotide comple | 99.92 | |
| 2hiv_A | 621 | Thermostable DNA ligase; ATP-dependent, open confo | 99.9 | |
| 1vs0_A | 310 | Putative DNA ligase-like protein RV0938/MT0965; OB | 99.9 | |
| 3gde_A | 558 | DNA ligase; DNA-binding domain, adenylation domain | 99.88 | |
| 1fvi_A | 297 | Chlorella virus DNA ligase-adenylate; adenylated D | 99.87 | |
| 1x9n_A | 688 | DNA ligase I; 5'-adenylated nicked DNA, protein-DN | 99.87 | |
| 3l2p_A | 579 | DNA ligase 3; DNA ligase, DNA repair, ATP-binding, | 99.85 | |
| 1a0i_A | 348 | DNA ligase; DNA replication; HET: DNA ATP; 2.60A { | 99.84 | |
| 3rgo_A | 157 | Protein-tyrosine phosphatase mitochondrial 1; phos | 99.83 | |
| 2oud_A | 177 | Dual specificity protein phosphatase 10; A central | 99.83 | |
| 3s4o_A | 167 | Protein tyrosine phosphatase-like protein; structu | 99.83 | |
| 3emu_A | 161 | Leucine rich repeat and phosphatase domain contain | 99.82 | |
| 3s4e_A | 144 | Dual specificity protein phosphatase 19; PTP, prot | 99.82 | |
| 3ezz_A | 144 | Dual specificity protein phosphatase 4; alpha/beta | 99.82 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 99.82 | |
| 1rxd_A | 159 | Protein tyrosine phosphatase type IVA, member 1; p | 99.82 | |
| 3rz2_A | 189 | Protein tyrosine phosphatase type IVA 1; tyrosine | 99.81 | |
| 2nt2_A | 145 | Protein phosphatase slingshot homolog 2; alpha/bet | 99.81 | |
| 2hxp_A | 155 | Dual specificity protein phosphatase 9; human phos | 99.81 | |
| 1zzw_A | 149 | Dual specificity protein phosphatase 10; MKP, PTP, | 99.81 | |
| 4erc_A | 150 | Dual specificity protein phosphatase 23; alpha bet | 99.8 | |
| 3f81_A | 183 | Dual specificity protein phosphatase 3; hydrolase, | 99.8 | |
| 2j16_A | 182 | SDP-1, tyrosine-protein phosphatase YIL113W; hydro | 99.8 | |
| 2e0t_A | 151 | Dual specificity phosphatase 26; conserved hypothe | 99.8 | |
| 2hcm_A | 164 | Dual specificity protein phosphatase; structural g | 99.79 | |
| 2img_A | 151 | Dual specificity protein phosphatase 23; DUSP23, V | 99.79 | |
| 2g6z_A | 211 | Dual specificity protein phosphatase 5; alpha/beta | 99.79 | |
| 2esb_A | 188 | Dual specificity protein phosphatase 18; alpha/bet | 99.78 | |
| 2r0b_A | 154 | Serine/threonine/tyrosine-interacting protein; str | 99.78 | |
| 1wrm_A | 165 | Dual specificity phosphatase 22; DSP, JNK, hydrola | 99.77 | |
| 3v0d_A | 339 | Voltage-sensor containing phosphatase; PTP, hydrol | 99.77 | |
| 3n0a_A | 361 | Tyrosine-protein phosphatase auxilin; phosphatase- | 99.77 | |
| 2y96_A | 219 | Dual specificity phosphatase DUPD1; hydrolase; 2.3 | 99.76 | |
| 1yz4_A | 160 | DUSP15, dual specificity phosphatase-like 15 isofo | 99.76 | |
| 2wgp_A | 190 | Dual specificity protein phosphatase 14; MKP6, DUS | 99.75 | |
| 3cm3_A | 176 | Late protein H1, dual specificity protein phosphat | 99.75 | |
| 2pq5_A | 205 | Dual specificity protein phosphatase 13; hydrolase | 99.75 | |
| 1d5r_A | 324 | Phosphoinositide phosphotase PTEN; C2 domain, phos | 99.74 | |
| 1fpz_A | 212 | Cyclin-dependent kinase inhibitor 3; alpha-beta sa | 99.72 | |
| 2q05_A | 195 | Late protein H1, dual specificity protein phosphat | 99.71 | |
| 2i6j_A | 161 | Ssoptp, sulfolobus solfataricus protein tyrosine p | 99.69 | |
| 3vnn_A | 139 | DNA ligase 4; non-homologous END joining, DNA repa | 99.68 | |
| 3nme_A | 294 | Ptpkis1 protein, SEX4 glucan phosphatase; dual spe | 99.63 | |
| 1xri_A | 151 | AT1G05000; structural genomics, protein structure | 99.55 | |
| 2f46_A | 156 | Hypothetical protein; structural genomics, joint c | 99.2 | |
| 3mmj_A | 314 | MYO-inositol hexaphosphate phosphohydrolase; phyta | 99.13 | |
| 1fpr_A | 284 | Protein-tyrosine phosphatase 1C; protein tyrosine | 99.11 | |
| 1p15_A | 253 | Protein-tyrosine phosphatase alpha; transmembrane, | 99.08 | |
| 2hc1_A | 291 | Receptor-type tyrosine-protein phosphatase beta; p | 99.06 | |
| 3b7o_A | 316 | Tyrosine-protein phosphatase non-receptor type 11; | 99.04 | |
| 1jln_A | 297 | STEP-like ptpase, protein tyrosine phosphatase, re | 99.03 | |
| 2b49_A | 287 | Protein tyrosine phosphatase, non-receptor type 3; | 99.01 | |
| 2cjz_A | 305 | Human protein tyrosine phosphatase PTPN5; protein | 98.99 | |
| 4grz_A | 288 | Tyrosine-protein phosphatase non-receptor type 6; | 98.99 | |
| 2ooq_A | 286 | Receptor-type tyrosine-protein phosphatase T; prot | 98.98 | |
| 2cm2_A | 304 | Tyrosine-protein phosphatase non-receptor type 1; | 98.98 | |
| 2gjt_A | 295 | Receptor-type tyrosine-protein phosphatase PTPro; | 98.97 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 98.97 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.97 | |
| 1zc0_A | 309 | Tyrosine-protein phosphatase, non-receptor type 7; | 98.95 | |
| 2i75_A | 320 | Tyrosine-protein phosphatase non-receptor type 4; | 98.94 | |
| 2bzl_A | 325 | Tyrosine-protein phosphatase, non-receptor type 14 | 98.93 | |
| 2p6x_A | 309 | Tyrosine-protein phosphatase non-receptor type 22; | 98.93 | |
| 1wch_A | 315 | Protein tyrosine phosphatase, non-receptor type 13 | 98.92 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 98.9 | |
| 3qwu_A | 370 | DNA ligase; structural genomics, PSI-2, midwest ce | 98.9 | |
| 1yfo_A | 302 | D1, receptor protein tyrosine phosphatase alpha; h | 98.89 | |
| 3i36_A | 342 | Vascular protein tyrosine phosphatase 1; PTP, hydr | 98.88 | |
| 1g4w_R | 383 | Protein tyrosine phosphatase SPTP; virulence facto | 98.86 | |
| 2i1y_A | 301 | Receptor-type tyrosine-protein phosphatase; recept | 98.84 | |
| 2h4v_A | 320 | Receptor-type tyrosine-protein phosphatase gamma; | 98.83 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 98.77 | |
| 3s3e_A | 307 | Tyrosine-protein phosphatase 10D; differentiation, | 98.77 | |
| 2oc3_A | 303 | Tyrosine-protein phosphatase non-receptor type 18; | 98.76 | |
| 2b3o_A | 532 | Tyrosine-protein phosphatase, non-receptor type 6; | 98.75 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 98.73 | |
| 4az1_A | 302 | Tyrosine specific protein phosphatase; hydrolase, | 98.72 | |
| 1xk5_A | 204 | Snurportin-1; protein-RNA-complex, transport prote | 98.72 | |
| 1l8k_A | 314 | T-cell protein-tyrosine phosphatase; hydrolase; 2. | 98.7 | |
| 2shp_A | 525 | SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin | 98.68 | |
| 3m4u_A | 306 | Tyrosine specific protein phosphatase, putative; p | 98.66 | |
| 2vug_A | 389 | PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transfe | 98.65 | |
| 3ps5_A | 595 | Tyrosine-protein phosphatase non-receptor type 6; | 98.65 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 98.65 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 98.63 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 98.6 | |
| 1ywf_A | 296 | Phosphotyrosine protein phosphatase PTPB; four str | 98.58 | |
| 3gjx_B | 365 | Snurportin-1; transport, cytoplasm, nucleus, RNA-b | 98.57 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 98.55 | |
| 4i8n_A | 354 | Tyrosine-protein phosphatase non-receptor type 1; | 98.49 | |
| 1lyv_A | 306 | Protein-tyrosine phosphatase YOPH; toxin, hydrolas | 98.43 | |
| 4ge6_A | 314 | Tyrosine-protein phosphatase non-receptor type 9; | 98.41 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 98.4 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 98.07 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 96.71 | |
| 1s68_A | 249 | RNA ligase 2; ribonucleic acid ligase, RNA repair; | 96.49 | |
| 2hvq_A | 335 | ORF1, hypothetical 37.6 kDa protein in GP24-HOC in | 96.37 | |
| 1ta8_A | 332 | DNA ligase, NAD-dependent; nucleotidyl transferase | 95.07 | |
| 1b04_A | 318 | Protein (DNA ligase); DNA replication; 2.80A {Geob | 94.31 | |
| 4glw_A | 305 | DNA ligase; inhibitor, ligase-ligase inhibitor com | 93.17 | |
| 4glx_A | 586 | DNA ligase; inhibitor, ligase-ligase inhibitor-DNA | 92.47 | |
| 3jsl_A | 318 | DNA ligase; NAD+-dependent, DNA damage, DNA repair | 91.89 | |
| 3uq8_A | 322 | DNA ligase; adenylated protein, ATP-grAsp, rossman | 89.8 | |
| 1xdn_A | 277 | RNA editing ligase MP52; HET: MSE ATP; 1.20A {Tryp | 87.69 | |
| 1zau_A | 328 | DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacteriu | 84.15 | |
| 1vee_A | 134 | Proline-rich protein family; hypothetical protein, | 83.32 | |
| 2owo_A | 671 | DNA ligase; protein-DNA complex, ligase-DNA comple | 82.04 |
| >3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-67 Score=553.43 Aligned_cols=293 Identities=40% Similarity=0.665 Sum_probs=195.7
Q ss_pred CCCCCCCCCCcccccchhhhhhhcccceeeeecCceeEEEEEEE-CCEEEEEeCCCccccc-cCCCCCcCCcccccccCC
Q 006472 305 GRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGEKTH 382 (643)
Q Consensus 305 ~~~~~~FPGsqPVslsr~~l~~l~~~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~~~~ 382 (643)
+|+..+|||||||||+|+||+.|.+++|+||||+||+|+||++. ++++||+||++.++.+ +.+||...... ..+
T Consensus 38 ~~~~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~~~~~v~L~sR~~~~~~~~~~~FP~~~~~~----~~~ 113 (343)
T 3rtx_A 38 GWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLR----MHL 113 (343)
T ss_dssp TCCSSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEECSTTCEEEECTTCCEEEETTCCCEETTEEE----EEC
T ss_pred CCCCCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEEcCCEEEEEeCCCCeEEeccccCCcchhhh----ccC
Confidence 88999999999999999999999999999999999999999999 7899999999987655 58999775421 236
Q ss_pred CCeEeeEEEEEecCCCCCCcceEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCCcE
Q 006472 383 HFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFR 462 (643)
Q Consensus 383 ~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~v~~p~~~~~~~~~~~~~p~~~~~~~pf~ 462 (643)
.+||||||||+++..+. ..++|++||+|+++|++++++||.+|+++|++.++.|+...++ ++.+....+||.
T Consensus 114 ~~tvLDGElV~~~~~g~--~~~~~~~FDlL~~~G~dl~~~pl~eR~~~L~~~i~~p~~~~~~------~~~~~~~~~pf~ 185 (343)
T 3rtx_A 114 SNTLLDGEMIIDKVNGQ--AVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMK------TGLIDKTQEPFS 185 (343)
T ss_dssp CSEEEEEEEEEEESSSS--EEEEEEEEEEEEBTTBCGGGSCHHHHHHHHHHHTHHHHHHHHH------HSSCCTTTSSSE
T ss_pred CCeEEEEEEEEecCCCc--EeeEEEEEEEEeECCcCcccCCHHHHHHHHHHHhhhHHHHHhh------cccccccCCCcE
Confidence 88999999999865332 4689999999999999999999999999999999988764431 122345678999
Q ss_pred EEecceeechhHHHHH-HHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecCC-c-------ee
Q 006472 463 VRRKDFWLLSTVNKLL-KEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDD-R-------QL 533 (643)
Q Consensus 463 I~~K~~~~~~~~~~ll-~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKP~~~nTvDF~l~~~~~~-~-------~~ 533 (643)
|+.|+|++++++.++| .+|++++.|++|||||||.+ ||.+|++..||||||+++|||||+|++.... . +.
T Consensus 186 vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~~~~~lKwKp~~~~tvDF~l~~~~~~~~g~~~~~~~~ 264 (343)
T 3rtx_A 186 VRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGL 264 (343)
T ss_dssp EEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEEEEEEEEECCSTTCC----------------------
T ss_pred EEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCCCcceEEEecCcceEEEEEEEecccCCCCccccccce
Confidence 9999999999999998 46889999999999999999 9999999999999999999999999886431 1 13
Q ss_pred EEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEecCCCCCChHHHHHHHHHhcccCCCHHHHHHH
Q 006472 534 LYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNE 613 (643)
Q Consensus 534 L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~~~It~e~Ll~~ 613 (643)
||+ +|...+++. +..+ +++.++||+||||+|| +|+|+|||+|+||++||+++||.+||+||.++||+|+|+++
T Consensus 265 l~~--~g~~~~f~~--~~~t-~~l~~ld~~IvEC~~~--~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~Vt~e~L~~~ 337 (343)
T 3rtx_A 265 LYV--GGYERPFAQ--IKVT-KELKQYDNKIIECKFE--NNSWVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEF 337 (343)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred EEE--CCeeeecce--eecc-ccchhcCCEEEEEEEE--CCEEEEEEEcCCCCCCchHHHHHHHHHHHHccCCHHHHHHH
Confidence 333 344333332 2121 4567899999999998 68999999999999999999999999999999999999999
Q ss_pred HHHH
Q 006472 614 IQEI 617 (643)
Q Consensus 614 i~~i 617 (643)
|++.
T Consensus 338 i~~~ 341 (343)
T 3rtx_A 338 IDRC 341 (343)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
|
| >3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3 | Back alignment and structure |
|---|
| >1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B* | Back alignment and structure |
|---|
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} | Back alignment and structure |
|---|
| >2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A* | Back alignment and structure |
|---|
| >2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A* | Back alignment and structure |
|---|
| >1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A* | Back alignment and structure |
|---|
| >1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1 | Back alignment and structure |
|---|
| >3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1 | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* | Back alignment and structure |
|---|
| >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} | Back alignment and structure |
|---|
| >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} | Back alignment and structure |
|---|
| >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A | Back alignment and structure |
|---|
| >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A | Back alignment and structure |
|---|
| >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A | Back alignment and structure |
|---|
| >3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A* | Back alignment and structure |
|---|
| >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} | Back alignment and structure |
|---|
| >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} | Back alignment and structure |
|---|
| >2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens} | Back alignment and structure |
|---|
| >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} | Back alignment and structure |
|---|
| >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A | Back alignment and structure |
|---|
| >2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* | Back alignment and structure |
|---|
| >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* | Back alignment and structure |
|---|
| >3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A | Back alignment and structure |
|---|
| >2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} | Back alignment and structure |
|---|
| >3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A | Back alignment and structure |
|---|
| >1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A | Back alignment and structure |
|---|
| >1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A | Back alignment and structure |
|---|
| >3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A* | Back alignment and structure |
|---|
| >1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A | Back alignment and structure |
|---|
| >2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens} | Back alignment and structure |
|---|
| >2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A* | Back alignment and structure |
|---|
| >4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A* | Back alignment and structure |
|---|
| >2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A | Back alignment and structure |
|---|
| >2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ... | Back alignment and structure |
|---|
| >2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
| >1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A | Back alignment and structure |
|---|
| >2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
| >2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A* | Back alignment and structure |
|---|
| >1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A | Back alignment and structure |
|---|
| >1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S | Back alignment and structure |
|---|
| >2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A | Back alignment and structure |
|---|
| >2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A* | Back alignment and structure |
|---|
| >2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi} | Back alignment and structure |
|---|
| >1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 | Back alignment and structure |
|---|
| >3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5} | Back alignment and structure |
|---|
| >3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* | Back alignment and structure |
|---|
| >3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A | Back alignment and structure |
|---|
| >4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A* | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4 | Back alignment and structure |
|---|
| >2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A* | Back alignment and structure |
|---|
| >1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A* | Back alignment and structure |
|---|
| >1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2 | Back alignment and structure |
|---|
| >4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A* | Back alignment and structure |
|---|
| >3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A* | Back alignment and structure |
|---|
| >1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4 | Back alignment and structure |
|---|
| >1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A | Back alignment and structure |
|---|
| >2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 643 | ||||
| d1i9sa_ | 194 | c.45.1.1 (A:) mRNA capping enzyme, triphosphatase | 7e-51 | |
| d1p16a2 | 245 | d.142.2.3 (A:1-245) mRNA capping enzyme alpha subu | 8e-42 | |
| d1ckma2 | 228 | d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA | 5e-34 | |
| d1ckma1 | 89 | b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA | 7e-20 | |
| d1p16a1 | 145 | b.40.4.6 (A:246-390) mRNA capping enzyme alpha sub | 1e-18 | |
| d1ohea2 | 182 | c.45.1.1 (A:199-380) Proline directed phosphatase | 3e-11 | |
| d1fpza_ | 176 | c.45.1.1 (A:) Kinase associated phosphatase (kap) | 1e-10 | |
| d1d5ra2 | 174 | c.45.1.1 (A:14-187) Phoshphoinositide phosphatase | 5e-10 | |
| d1rxda_ | 152 | c.45.1.1 (A:) Protein tyrosine phosphatase type IV | 6e-10 | |
| d1m3ga_ | 145 | c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien | 5e-07 | |
| d1mkpa_ | 144 | c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien | 3e-06 | |
| d1vhra_ | 178 | c.45.1.1 (A:) VH1-related dual-specificity phospha | 3e-05 | |
| d2pt0a1 | 313 | c.45.1.4 (A:34-346) Myo-inositol hexaphosphate pho | 0.003 |
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Dual specificity phosphatase-like domain: mRNA capping enzyme, triphosphatase domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 172 bits (437), Expect = 7e-51
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 3/196 (1%)
Query: 85 KLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLV 144
K+PP WL+CP GQ + G +P K L ++ + R+ + + L+ L K+ L+
Sbjct: 1 KIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLL 60
Query: 145 IDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI 204
+DLTNT+R+Y +D++KEGIK++K+QCKG P + F+ +F ++ + I
Sbjct: 61 VDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFN--ERSPPELI 118
Query: 205 LVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264
VHCTHG NRTG++I FL+ S+ A+ FA+ RPPGIYK +Y++ L+ Y +
Sbjct: 119 GVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIE- 177
Query: 265 DSTPCPSTPEWKRELD 280
++ P P P+W E +
Sbjct: 178 EAPPPPVLPDWCFEDE 193
|
| >d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} Length = 245 | Back information, alignment and structure |
|---|
| >d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} Length = 228 | Back information, alignment and structure |
|---|
| >d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]} Length = 89 | Back information, alignment and structure |
|---|
| >d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} Length = 145 | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} Length = 182 | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} Length = 152 | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} Length = 144 | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} Length = 178 | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} Length = 313 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 643 | |||
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 100.0 | |
| d1p16a2 | 245 | mRNA capping enzyme alpha subunit {Yeast (Candida | 100.0 | |
| d1ckma2 | 228 | RNA guanylyltransferase (mRNA capping enzyme), N-t | 100.0 | |
| d1ohea2 | 182 | Proline directed phosphatase CDC14b2 {Human (Homo | 99.89 | |
| d1x9na3 | 220 | DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: | 99.88 | |
| d1rxda_ | 152 | Protein tyrosine phosphatase type IVa {Human (Homo | 99.86 | |
| d1mkpa_ | 144 | Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp | 99.8 | |
| d1d5ra2 | 174 | Phoshphoinositide phosphatase Pten (Pten tumor sup | 99.79 | |
| d1vhra_ | 178 | VH1-related dual-specificity phosphatase, VHR {Hum | 99.79 | |
| d1ckma1 | 89 | RNA guanylyltransferase (mRNA capping enzyme) {Chl | 99.79 | |
| d1p16a1 | 145 | mRNA capping enzyme alpha subunit {Yeast (Candida | 99.78 | |
| d1fpza_ | 176 | Kinase associated phosphatase (kap) {Human (Homo s | 99.77 | |
| d1m3ga_ | 145 | Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax | 99.76 | |
| d1a0ia2 | 239 | ATP-dependent DNA ligase, N-terminal domain {Bacte | 99.7 | |
| d1fvia2 | 188 | ATP-dependent DNA ligase, N-terminal domain {Chlor | 99.51 | |
| d1xria_ | 151 | Putative phosphatase At1g05000 {Thale cress (Arabi | 99.35 | |
| d2pt0a1 | 313 | Myo-inositol hexaphosphate phosphohydrolase (phyta | 98.87 | |
| d1g4us2 | 243 | SptP tyrosine phosphatase, catalytic domain {Salmo | 98.62 | |
| d1lara2 | 249 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 98.51 | |
| d1fpra_ | 284 | Tyrosine phosphatase {Human (Homo sapiens), shp-1 | 98.5 | |
| d1lara1 | 317 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 98.49 | |
| d1p15a_ | 245 | Protein-tyrosine phosphatase alpha {Mouse (Mus mus | 98.48 | |
| d1jlna_ | 297 | Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl | 98.46 | |
| d1rpma_ | 278 | Tyrosine phosphatase {Human (Homo sapiens), mu [Ta | 98.46 | |
| d1s68a_ | 233 | RNA ligase 2, N-terminal domain {Bacteriophage T4 | 98.43 | |
| d1wcha_ | 308 | Tyrosine-protein phosphatase, non-receptor type 13 | 98.4 | |
| d2shpa1 | 307 | Tyrosine phosphatase {Human (Homo sapiens), shp-2 | 98.37 | |
| d1l8ka_ | 273 | Tyrosine phosphatase {Human (Homo sapiens), T-cell | 98.27 | |
| d2f71a1 | 297 | Tyrosine phosphatase {Human (Homo sapiens), 1B [Ta | 98.25 | |
| d1lyva_ | 283 | Protein-tyrosine phosphatase YopH, catalytic domai | 98.25 | |
| d1yfoa_ | 288 | Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: | 98.15 | |
| d1ywfa1 | 272 | Phosphotyrosine protein phosphatase PtpB {Mycobact | 97.94 | |
| d1ohea1 | 157 | Proline directed phosphatase CDC14b2 {Human (Homo | 97.29 | |
| d1b04a_ | 312 | Adenylation domain of NAD+-dependent DNA ligase {B | 92.59 | |
| d1ta8a_ | 313 | Adenylation domain of NAD+-dependent DNA ligase {E | 91.78 | |
| d1dgsa3 | 314 | Adenylation domain of NAD+-dependent DNA ligase {T | 89.57 | |
| d1xdna_ | 265 | RNA editing ligase MP52 {Trypanosoma brucei [TaxId | 82.67 |
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Dual specificity phosphatase-like domain: mRNA capping enzyme, triphosphatase domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.4e-42 Score=333.42 Aligned_cols=191 Identities=38% Similarity=0.763 Sum_probs=178.2
Q ss_pred CCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCeeEEEEcCCCCCCCCcchhccCCc
Q 006472 85 KLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI 164 (643)
Q Consensus 85 ~~p~~W~~~~~~g~~I~~~flp~k~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI 164 (643)
+||.+|++||++|++|+++|||||+|+++.++..++.+.+|++.+++++++..+.++++|||||++.++|++++|+..||
T Consensus 1 klP~~W~~~~~~~~~I~~~fIa~k~Pl~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~~vinlt~~~~~Y~~~~~~~~gi 80 (194)
T d1i9sa_ 1 KIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKEGI 80 (194)
T ss_dssp CCCTTCTTSCSBCCCBTTTEEEECCCCCGGGTTTSCGGGCCCHHHHHHHHHHTTCCEEEEEECSSCSSSSCTHHHHTTTC
T ss_pred CCCchhhcCCCCCCEeCCCEEEecCCCCcCcccccCccccCCHHHHHHHHHhhCCCceEEEEccCCCCCcCHHHHHhcCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCC
Q 006472 165 KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPP 244 (643)
Q Consensus 165 ~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RSG~li~aYLm~~~g~s~~eAi~~~~~~Rp~ 244 (643)
.|+++|+.|.+.+|+.+.+..|++.+..|++ ..+++.|+|||++|+||||+|||||||++.||++++|++.|+++||+
T Consensus 81 ~~~~~~~~~~~~~P~~~~~~~f~~~v~~~~~--~~~~~~V~VHC~~G~~Rsg~~i~ayL~~~~~~s~~~Ai~~~~~~Rp~ 158 (194)
T d1i9sa_ 81 KYIKLQCKGHGECPTTENTETFIRLCERFNE--RSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPP 158 (194)
T ss_dssp EEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CCEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTT
T ss_pred eEEEecCCCCCCCCChHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHCCC
Confidence 9999999887678999999999999988887 45688999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhccCCCCCCCCCCCccccc
Q 006472 245 GIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE 278 (643)
Q Consensus 245 ~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~ 278 (643)
++++++|+++|.++|.+... .+++|++|+|+++
T Consensus 159 ~i~~~~~~~~L~~~y~~~~~-~~~~~~~p~w~~~ 191 (194)
T d1i9sa_ 159 GIYKGDYLKELFRRYGDIEE-APPPPVLPDWCFE 191 (194)
T ss_dssp CCCCHHHHHHHHHHHSCGGG-CCCCCCCCGGGGT
T ss_pred CCCCHHHHHHHHHHHHhhcc-CCCCCCCCCccCC
Confidence 99999999999999999886 6789999999974
|
| >d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a0ia2 d.142.2.1 (A:2-240) ATP-dependent DNA ligase, N-terminal domain {Bacteriophage T7 [TaxId: 10760]} | Back information, alignment and structure |
|---|
| >d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} | Back information, alignment and structure |
|---|
| >d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1s68a_ d.142.2.4 (A:) RNA ligase 2, N-terminal domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]} | Back information, alignment and structure |
|---|
| >d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ta8a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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| >d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]} | Back information, alignment and structure |
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| >d1xdna_ d.142.2.4 (A:) RNA editing ligase MP52 {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
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