Citrus Sinensis ID: 006488

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640---
MTAAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTVDNGRQPSFPNKSESNEPNVQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGRKKQTFIV
cccHHHHHHHHHccccccccccccccccccccccccccHHcccccccccEEccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccccHHHHHccccccccccccccccccccEEEccccHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccEEcccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccccccccccc
cccccHHHHEEcccccccccccccccccccccccccEEEEEEEccccEEEEEcccccccccEEEEEcccccccccccccccEccccccEEccccccEEEccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHEccccEEEEEEccccccccccHcHHHHHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccEEEcccccHcHEcccccccHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHccccccccEEEccccccHccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHHHccccHHccccHHcccccccccccHHHHHHccccccEEEEccccccccEHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHcccccccEccHHHHHHHHHHHHHHHHHHHHHHcHHHccEEEccccHHHHHHHHHHHcccccccccccccccEEc
MTAAGEAVLQVLSgasphvnsfdrclnisssgvsfkFNVKYAKNKGTGYAELHNGLKSRWRVCVFhgvdcdshgktgcnrlksgcckcrriesidgltvdngrqpsfpnksesnepnvqdfkldrqlkngkagissndklnasgsiTNTVHKVWAKSVEDEAWDLLRESIVYYcgnpvgtiaandpndstilnydqvfirDFIPSGIAFLLKGEYDIVRNFILHTLQlqswektmdchspgqglmpasfkvrtvpldgddsateevldpdfgeaaigrvapvdsgLWWIILLRAYGkcsgdlsvqeRVDVQTGIKMILKLCLadgfdmfptllvtdgscmidrrmgihghpLEIQALFYSALLSAremltpedgsADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYkteeysydavnkfniypdqippwlveFMPHiggylignlqpahmdfRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMplkicypalegqewriitgsdpkntpwsyhnggswpTLLWQLTVACIKMNRVEIAEKAVKLAERHisgdkwpeyydtkrgrfigkqsrLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCmisasprrrkrgrkkqtfiv
MTAAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDcdshgktgcnrlksgcCKCRRiesidgltvdngrqpsfpnksesnepnvqDFKLDRQLKNGKAgissndklnasgsiTNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVgtiaandpndSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLaerhisgdkwpeyydtKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAfscmisasprrrkrgrkkqtfiv
MTAAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTVDNGRQPSFPNKSESNEPNVQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGRKKQTFIV
*********QVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTV**********************************************ITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHS****LM**SFKVRT************VLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMI******************
*****EA*LQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKS*WRV*VFHGVDCDSHGKTGCNRL*******************************************************************************EAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVN********************TFIV
MTAAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTVDNGRQP************VQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISAS***************
****GEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTVDNGRQP*************************************************AKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISA****************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTAAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHNGLKSRWRVCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTVDNGRQPSFPNKSESNEPNVQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGRKKQTFIV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query643
359486945714 PREDICTED: uncharacterized protein LOC10 0.989 0.890 0.750 0.0
359479382639 PREDICTED: uncharacterized protein LOC10 0.981 0.987 0.750 0.0
399138444650 neutral invertase [Litchi chinensis] 0.984 0.973 0.739 0.0
255582448663 beta-fructofuranosidase, putative [Ricin 0.989 0.959 0.736 0.0
449465541638 PREDICTED: uncharacterized protein LOC10 0.970 0.978 0.718 0.0
255576365634 beta-fructofuranosidase, putative [Ricin 0.975 0.988 0.735 0.0
356525551652 PREDICTED: uncharacterized protein LOC10 0.986 0.972 0.727 0.0
356512768652 PREDICTED: uncharacterized protein LOC10 0.986 0.972 0.719 0.0
384371330663 neutral/alkaline invertase [Manihot escu 0.987 0.957 0.714 0.0
312282229622 unnamed protein product [Thellungiella h 0.870 0.900 0.782 0.0
>gi|359486945|ref|XP_002264960.2| PREDICTED: uncharacterized protein LOC100248981 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  991 bits (2563), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/653 (75%), Positives = 543/653 (83%), Gaps = 17/653 (2%)

Query: 3   AAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYA-ELHNGLKSRWR 61
              EAVLQV SGA P +   D C + S S   FK ++K  K +G+ Y  +    ++S   
Sbjct: 67  GTSEAVLQVFSGAVPCLFGSDPCFSKSDSMSPFKSHIKSVKKRGSRYMLKCSYMIRSHIM 126

Query: 62  VCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLT---------VDNGRQPSFPNKSE 112
               HGV    +G T  +R +   CKC+R +S+ G+          VDN ++ + P    
Sbjct: 127 THRLHGVGGGLYGNTSIHRSQLQSCKCQRADSVSGIASEAGNGTWFVDNAKKRN-PINGV 185

Query: 113 SNEPNVQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAKSVEDEAWDLLRESIVY 172
            + PNV +F+  ++LK    G  SN    A  +  +T  KV   S+EDEAWDLLRES+VY
Sbjct: 186 MDTPNVLEFQDVQELKPEMEGSISN---GAVETARDTFVKVRVDSIEDEAWDLLRESMVY 242

Query: 173 YCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWE 232
           YCG+P+GTIAA DP  S +LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWE
Sbjct: 243 YCGSPIGTIAAKDPTSSNVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWE 302

Query: 233 KTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILL 292
           KTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILL
Sbjct: 303 KTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILL 362

Query: 293 RAYGKCSGDLSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPL 352
           RAYGKCSGDLSVQER+DVQTGIKMIL+LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPL
Sbjct: 363 RAYGKCSGDLSVQERIDVQTGIKMILRLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPL 422

Query: 353 EIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKT 412
           EIQALFYSALL AREML PEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKT
Sbjct: 423 EIQALFYSALLCAREMLAPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKT 482

Query: 413 EEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLA 472
           EEYSYDAVNKFNIYPDQI PWLVE+MP+ GGYLIGNLQPAHMDFRFFSLGNLWS++SSLA
Sbjct: 483 EEYSYDAVNKFNIYPDQISPWLVEWMPNKGGYLIGNLQPAHMDFRFFSLGNLWSIISSLA 542

Query: 473 TVDQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPT 532
           T+DQSHAILDL+EAKW +LVADMPLKICYPALEGQEW+IITGSDPKNTPWSYHN GSWPT
Sbjct: 543 TMDQSHAILDLVEAKWGDLVADMPLKICYPALEGQEWQIITGSDPKNTPWSYHNAGSWPT 602

Query: 533 LLWQLTVACIKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAG 592
           LLWQLTVACIKM+R +IA KAV++AER I+ DKWPEYYDTK+ RFIGKQ+ L+QTWSIAG
Sbjct: 603 LLWQLTVACIKMDRPQIAAKAVEIAERRIARDKWPEYYDTKKARFIGKQACLFQTWSIAG 662

Query: 593 YLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGRKK--QTFIV 643
           YLVAKLLL +P AAK+L+TEEDSELVNAFSCMISA+P RRKRGRK   QTFIV
Sbjct: 663 YLVAKLLLSDPTAAKILITEEDSELVNAFSCMISANP-RRKRGRKSSTQTFIV 714

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359479382|ref|XP_003632264.1| PREDICTED: uncharacterized protein LOC100854602 [Vitis vinifera] Back     alignment and taxonomy information
>gi|399138444|gb|AFP23358.1| neutral invertase [Litchi chinensis] Back     alignment and taxonomy information
>gi|255582448|ref|XP_002532011.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223528323|gb|EEF30366.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449465541|ref|XP_004150486.1| PREDICTED: uncharacterized protein LOC101217778 [Cucumis sativus] gi|449516272|ref|XP_004165171.1| PREDICTED: uncharacterized protein LOC101226610 [Cucumis sativus] Back     alignment and taxonomy information
>gi|255576365|ref|XP_002529075.1| beta-fructofuranosidase, putative [Ricinus communis] gi|223531487|gb|EEF33319.1| beta-fructofuranosidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356525551|ref|XP_003531388.1| PREDICTED: uncharacterized protein LOC100788719 [Glycine max] Back     alignment and taxonomy information
>gi|356512768|ref|XP_003525088.1| PREDICTED: uncharacterized protein LOC100813457 [Glycine max] Back     alignment and taxonomy information
>gi|384371330|gb|AFH77954.1| neutral/alkaline invertase [Manihot esculenta] Back     alignment and taxonomy information
>gi|312282229|dbj|BAJ33980.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query643
TAIR|locus:2171112617 INV-E "alkaline/neutral invert 0.782 0.815 0.865 3e-243
TAIR|locus:2027600616 A/N-InvA "alkaline/neutral inv 0.734 0.766 0.742 1.5e-202
TAIR|locus:2074434659 INVH "invertase H" [Arabidopsi 0.818 0.798 0.677 4.7e-199
TAIR|locus:2084329664 A/N-InvC "alkaline/neutral inv 0.741 0.718 0.721 2e-198
TAIR|locus:2014676551 CINV1 "cytosolic invertase 1" 0.698 0.814 0.618 5.5e-157
TAIR|locus:2133737558 CINV2 "cytosolic invertase 2" 0.702 0.810 0.601 1e-155
TAIR|locus:2116870571 A/N-InvB "alkaline/neutral inv 0.701 0.789 0.597 8.2e-154
TAIR|locus:2199690534 A/N-InvD "alkaline/neutral inv 0.701 0.844 0.598 5.2e-152
TAIR|locus:2016064499 A/N-InvF "alkaline/neutral inv 0.702 0.905 0.588 7.9e-149
TAIR|locus:2171112 INV-E "alkaline/neutral invertase E" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2344 (830.2 bits), Expect = 3.0e-243, P = 3.0e-243
 Identities = 438/506 (86%), Positives = 471/506 (93%)

Query:   140 LNASGSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFI 199
             +N S S       V  KS+EDEAWDLLR+S+V+YCG+P+GTIAANDPN +++LNYDQVFI
Sbjct:   113 VNGSVSSNGNAQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPNSTSVLNYDQVFI 172

Query:   200 RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGD 259
             RDFIPSGIAFLLKGEYDIVRNFIL+TLQLQSWEKTMDCHSPGQGLMP SFKV+TVPLDGD
Sbjct:   173 RDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGD 232

Query:   260 DSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKMILK 319
             DS TEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKC+GDLSVQERVDVQTGIKMILK
Sbjct:   233 DSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQTGIKMILK 292

Query:   320 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLI 379
             LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSAL+ AREMLTPEDGSADLI
Sbjct:   293 LCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSADLI 352

Query:   380 RALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMP 439
             RALNNRLVAL+FHIREYYW+D+KK+NEIYRY+TEEYSYDAVNKFNIYPDQIP WLV+FMP
Sbjct:   353 RALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMP 412

Query:   440 HIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKWAELVADMPLKI 499
             + GGYLIGNLQPAHMDFRFF+LGNLWS+VSSLA+ DQSHAILD IEAKWAELVADMPLKI
Sbjct:   413 NRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLASNDQSHAILDFIEAKWAELVADMPLKI 472

Query:   500 CYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAER 559
             CYPA+EG+EWRIITGSDPKNTPWSYHNGG+WPTLLWQLTVA IKM R EIAEKAV+LAER
Sbjct:   473 CYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVELAER 532

Query:   560 HISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVN 619
              IS DKWPEYYDTKR RFIGKQ+RLYQTWSIAGYLVAKLLL NPAAAK L +EEDS+L N
Sbjct:   533 RISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRN 592

Query:   620 AFSCMISASPRRRKRGRKK--QTFIV 643
             AFSCM+SA+PRR  RG KK  Q FIV
Sbjct:   593 AFSCMLSANPRRT-RGPKKAQQPFIV 617
GO:0003824 "catalytic activity" evidence=IEA
GO:0004564 "beta-fructofuranosidase activity" evidence=ISS
GO:0004575 "sucrose alpha-glucosidase activity" evidence=IDA;IMP
GO:0005982 "starch metabolic process" evidence=IMP
GO:0009507 "chloroplast" evidence=IDA
GO:0005987 "sucrose catabolic process" evidence=IDA
GO:0048825 "cotyledon development" evidence=IMP
TAIR|locus:2027600 A/N-InvA "alkaline/neutral invertase A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074434 INVH "invertase H" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084329 A/N-InvC "alkaline/neutral invertase C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014676 CINV1 "cytosolic invertase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133737 CINV2 "cytosolic invertase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116870 A/N-InvB "alkaline/neutral invertase B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199690 A/N-InvD "alkaline/neutral invertase D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016064 A/N-InvF "alkaline/neutral invertase F" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!
4th Layer2.4.1.25LOW CONFIDENCE prediction!
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query643
PLN02703618 PLN02703, PLN02703, beta-fructofuranosidase 0.0
pfam12899437 pfam12899, Glyco_hydro_100, Alkaline and neutral i 0.0
PLN03005550 PLN03005, PLN03005, beta-fructofuranosidase 0.0
PLN02973571 PLN02973, PLN02973, beta-fructofuranosidase 0.0
COG3408641 COG3408, GDB1, Glycogen debranching enzyme [Carboh 0.003
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase Back     alignment and domain information 
 Score = 1031 bits (2667), Expect = 0.0
 Identities = 464/644 (72%), Positives = 516/644 (80%), Gaps = 30/644 (4%)

Query: 3   AAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFK-FNVKYAKNKGTGYAELHNGLKSRWR 61
           AA E VL+V  G+             S+  +SFK  +    K + T   E  +    +  
Sbjct: 2   AASETVLRVPLGSLSQSCYLASFFVNSTPNLSFKPVSYNRKKVRCTNSHEYSSVSACQDA 61

Query: 62  VCVFHGVDCDSHGKTGCNRLKSGCCKCRRIESIDGLTVDNGRQPSFPNKSESNEPNVQDF 121
              FH  +    GK    +     CKC++ +  +   + +   PS   KS+ +E  +   
Sbjct: 62  DGSFHSSNECLKGK----KFVQMRCKCQKHDVEES--IRSTLLPSDGLKSDLDEMPL--- 112

Query: 122 KLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAKSVEDEAWDLLRESIVYYCGNPVGTI 181
                             +N S S       V  KS+EDEAWDLLR+S+V+YCG+P+GTI
Sbjct: 113 -----------------PVNGSFSSNGNAQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTI 155

Query: 182 AANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPG 241
           AANDP+ +++LNYDQVFIRDFIPSGIAFLLKGEYDIVRNFIL+TLQLQSWEKTMDCHSPG
Sbjct: 156 AANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMDCHSPG 215

Query: 242 QGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGD 301
           QGLMP SFKV+TVPLDGDDS TEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKC+GD
Sbjct: 216 QGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGD 275

Query: 302 LSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA 361
           LSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA
Sbjct: 276 LSVQERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSA 335

Query: 362 LLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVN 421
           L+ AREMLTPEDGS DLIRALNNRLVAL+FHIREYYW+D+KK+NEIYRY+TEEYSYDAVN
Sbjct: 336 LVCAREMLTPEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVN 395

Query: 422 KFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAIL 481
           KFNIYPDQIP WLV+FMP+ GGYLIGNLQPAHMDFRFF+LGNLWS+VSSLAT DQSHAIL
Sbjct: 396 KFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLATNDQSHAIL 455

Query: 482 DLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVAC 541
           DLIEAKWAELVADMPLKICYPA+EG+EWRIITGSDPKNTPWSYHNGG+WPTLLWQLTVA 
Sbjct: 456 DLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVAS 515

Query: 542 IKMNRVEIAEKAVKLAERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLD 601
           IKM R EIAEKAV+LAER IS DKWPEYYDTKR RFIGKQ+RLYQTWSIAGYLVAKLLL 
Sbjct: 516 IKMGRPEIAEKAVELAERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLA 575

Query: 602 NPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGRK--KQTFIV 643
           NPAAAK L +EEDS+L NAFSCMISA+P RR RG K  +Q FIV
Sbjct: 576 NPAAAKFLTSEEDSDLRNAFSCMISANP-RRTRGPKKAQQPFIV 618

Length = 618
>gnl|CDD|221840 pfam12899, Glyco_hydro_100, Alkaline and neutral invertase Back     alignment and domain information
>gnl|CDD|178582 PLN03005, PLN03005, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|178556 PLN02973, PLN02973, beta-fructofuranosidase Back     alignment and domain information
>gnl|CDD|225942 COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 643
PLN02703618 beta-fructofuranosidase 100.0
PLN02973571 beta-fructofuranosidase 100.0
PF12899436 Glyco_hydro_100: Alkaline and neutral invertase; I 100.0
PLN03005550 beta-fructofuranosidase 100.0
PF06202370 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR 100.0
COG3408641 GDB1 Glycogen debranching enzyme [Carbohydrate tra 100.0
TIGR01561575 gde_arch glycogen debranching enzyme, archaeal typ 100.0
TIGR015311464 glyc_debranch glycogen debranching enzymye. glycog 100.0
PRK10137786 alpha-glucosidase; Provisional 100.0
KOG36251521 consensus Alpha amylase [Carbohydrate transport an 99.92
TIGR01577616 oligosac_amyl oligosaccharide amylase. The name of 99.88
PRK13271569 treA trehalase; Provisional 99.85
PLN02567554 alpha,alpha-trehalase 99.83
PRK13272542 treA trehalase; Provisional 99.8
PRK13270549 treF trehalase; Provisional 99.77
PF01204512 Trehalase: Trehalase; InterPro: IPR001661 O-Glycos 99.74
PF05592509 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int 99.63
PF04685365 DUF608: Protein of unknown function, DUF608; Inter 99.56
COG3387612 SGA1 Glucoamylase and related glycosyl hydrolases 99.56
PF03200801 Glyco_hydro_63: Mannosyl oligosaccharide glucosida 99.51
TIGR01535648 glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc 99.37
COG34591056 Cellobiose phosphorylase [Carbohydrate transport a 99.24
COG1626558 TreA Neutral trehalase [Carbohydrate transport and 98.95
KOG2161849 consensus Glucosidase I [Carbohydrate transport an 98.88
KOG0602600 consensus Neutral trehalase [Carbohydrate transpor 98.69
PF00723448 Glyco_hydro_15: Glycosyl hydrolases family 15; Int 98.58
COG4354721 Predicted bile acid beta-glucosidase [Carbohydrate 98.28
PF06824424 DUF1237: Protein of unknown function (DUF1237); In 98.06
COG3538434 Uncharacterized conserved protein [Function unknow 97.4
KOG2119879 consensus Predicted bile acid beta-glucosidase [Ca 96.27
PF03632370 Glyco_hydro_65m: Glycosyl hydrolase family 65 cent 86.95
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 84.49
>PLN02703 beta-fructofuranosidase Back     alignment and domain information 
Probab=100.00  E-value=5e-145  Score=1174.07  Aligned_cols=609  Identities=75%  Similarity=1.222  Sum_probs=573.0

Q ss_pred             hhhHHHHHHhcCCCCCccccCcccccCCccccceeeeccccccccchhHHHh---hhhcccceeeecccCCCCCCC-cc-
Q 006488            3 AAGEAVLQVLSGASPHVNSFDRCLNISSSGVSFKFNVKYAKNKGTGYAELHN---GLKSRWRVCVFHGVDCDSHGK-TG-   77 (643)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~-   77 (643)
                      ||+|+|||+++|++++++|++++|+|+.+..+++         +++|++.++   ..++...+..||+.+.++|.+ ++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (618)
T PLN02703          2 AASETVLRVPLGSLSQSCYLASFFVNSTPNLSFK---------PVSYNRKKVRCTNSHEYSSVSACQDADGSFHSSNECL   72 (618)
T ss_pred             chhhhHHhccccccCCcchhhhhhcCCccccccc---------cccccccccccccccceeccCcccccccccccchhhh
Confidence            6899999999999999999999999988877544         344444433   467788899999999999988 33 


Q ss_pred             -cCCCccccccccccccccCccccCCCCCccCCCCCCCCCCccchhhhhhhhcCCcccccCCCccccccccccccccccc
Q 006488           78 -CNRLKSGCCKCRRIESIDGLTVDNGRQPSFPNKSESNEPNVQDFKLDRQLKNGKAGISSNDKLNASGSITNTVHKVWAK  156 (643)
Q Consensus        78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (643)
                       .+++..++||||+++..++.     +.+.+|.++...+-  .+..     -+.+++++++||          ..+++.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~----------~~~~~~~  130 (618)
T PLN02703         73 KGKKFVQMRCKCQKHDVEESI-----RSTLLPSDGLKSDL--DEMP-----LPVNGSFSSNGN----------AQSVGTK  130 (618)
T ss_pred             hhhhHHHHhhhhhhhhhhccc-----cccccccccccccc--cccc-----CcccCcCCCCCc----------ccccCCC
Confidence             68999999999999977666     78888887765431  1111     277889999888          6688999


Q ss_pred             hHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHhhhhcccccc
Q 006488          157 SVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMD  236 (643)
Q Consensus       157 ~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~LQ~~e~~ld  236 (643)
                      .+.++||++|++++|+||++|+||+||.|+++..+.||++||+||++|+++++|+.|++|++|+||..+++||++|+++|
T Consensus       131 ~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~tL~lq~~ektld  210 (618)
T PLN02703        131 SIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYTLQLQSWEKTMD  210 (618)
T ss_pred             hHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHhhhhhHHHHH
Confidence            99999999999999999999999999998864456999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHhhhcHHHHHH
Q 006488          237 CHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQERVDVQTGIKM  316 (643)
Q Consensus       237 ~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~l~~~p~i~~  316 (643)
                      +||+++|+||++|||.++|+++++..++++|+||||+.+|+|+++|||+|||||++++|.+.|||.+|+++++||++|++
T Consensus       211 ~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~e~~~~Q~gI~l  290 (618)
T PLN02703        211 CHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQERVDVQTGIKM  290 (618)
T ss_pred             hccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHhhhhhHHHHHHH
Confidence            99999999999999999999998889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 006488          317 ILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREY  396 (643)
Q Consensus       317 iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~  396 (643)
                      ||+||+.++|+++|+++|+||++|+|+||+++|||+|||||||.||+++.+|+....+..+.++++..|+.+|+++++++
T Consensus       291 iL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L~~hir~~  370 (618)
T PLN02703        291 ILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNFHIREY  370 (618)
T ss_pred             HHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999876667888999999999999999999


Q ss_pred             hhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHH
Q 006488          397 YWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQ  476 (643)
Q Consensus       397 FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eq  476 (643)
                      ||++.++++.||||+||+|+++++|+|||+|++||+||++|||++||||+|||+|+++|||||++||+||+++||++++|
T Consensus       371 yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs~Lat~~Q  450 (618)
T PLN02703        371 YWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLATNDQ  450 (618)
T ss_pred             HhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHhcCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHH
Q 006488          477 SHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKL  556 (643)
Q Consensus       477 a~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~  556 (643)
                      +++|++.|+++|++|++.||||+||||+++++||++|+++|+|.||||||||+||+++|++++|++|+|+.+.|+++++.
T Consensus       451 s~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~lA~ral~~  530 (618)
T PLN02703        451 SHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVEL  530 (618)
T ss_pred             HHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhcCCCCcccccccccHhhHhhhhhhcccCcchhcccc
Q 006488          557 AERHISGDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLDNPAAAKVLVTEEDSELVNAFSCMISASPRRRKRGR  636 (643)
Q Consensus       557 ~~~~l~~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  636 (643)
                      +++++..++|||||||++|+|+|++||.+|+||||++|+++++|+||+++++|+++||++.++.|+|.+++++| +|+++
T Consensus       531 ae~rl~~d~WpEYyDGktGr~iGkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~~~~~~~~~~~~~~-~~~~~  609 (618)
T PLN02703        531 AERRISLDKWPEYYDTKRARFIGKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDLRNAFSCMISANPR-RTRGP  609 (618)
T ss_pred             HHHHhhhccChhhccCCCCcCcceeccccCchHHHHHHHHHHHHhChhhccccccccchhhhhhheeecccCCc-ccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998 77777


Q ss_pred             c--cccccC
Q 006488          637 K--KQTFIV  643 (643)
Q Consensus       637 ~--~~~~~~  643 (643)
                      +  ||+|||
T Consensus       610 ~~~~~~~~~  618 (618)
T PLN02703        610 KKAQQPFIV  618 (618)
T ss_pred             ccccCCccC
Confidence            7  999997

>PLN02973 beta-fructofuranosidase Back     alignment and domain information
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases Back     alignment and domain information
>PLN03005 beta-fructofuranosidase Back     alignment and domain information
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT Back     alignment and domain information
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative Back     alignment and domain information
>TIGR01531 glyc_debranch glycogen debranching enzymye Back     alignment and domain information
>PRK10137 alpha-glucosidase; Provisional Back     alignment and domain information
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01577 oligosac_amyl oligosaccharide amylase Back     alignment and domain information
>PRK13271 treA trehalase; Provisional Back     alignment and domain information
>PLN02567 alpha,alpha-trehalase Back     alignment and domain information
>PRK13272 treA trehalase; Provisional Back     alignment and domain information
>PRK13270 treF trehalase; Provisional Back     alignment and domain information
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes Back     alignment and domain information
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide [] Back     alignment and domain information
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3 Back     alignment and domain information
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase Back     alignment and domain information
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function Back     alignment and domain information
>COG3538 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query643
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 5e-09
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807 Back     alignment and structure
 Score = 58.2 bits (140), Expect = 5e-09
 Identities = 51/362 (14%), Positives = 92/362 (25%), Gaps = 59/362 (16%)

Query: 200 RDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRTVPLDGD 259
           RD     I+       ++ R  I+  L+ Q                P    V        
Sbjct: 349 RDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAPSKSPT- 406

Query: 260 DSATEEVLDPDFGEAAIG-RVAPVDSGLWWIILLRAYGKCSGDLSV-QERVDVQTGIKMI 317
                 V  P   +   G +    D  LW I  +  Y   +G+ S   + +    G +  
Sbjct: 407 -----VVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEAS 461

Query: 318 LKLCLADGFDMFPTLLVTDGSCMI---------DRRMGIHGHPLEIQALFYSALLSAREM 368
           +   +    D         G   I         D      G    +  L + AL    ++
Sbjct: 462 VYEHMKAALD---FSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFIDL 518

Query: 369 LTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPD 428
                G    +         +      + W                             D
Sbjct: 519 AKFL-GKDQDVNTYTEMAANVREACETHLW-----------------------------D 548

Query: 429 QIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEAKW 488
               W +  +   G  +         + R     N  +V+S LA+ ++    +D ++   
Sbjct: 549 DEGGWYIRGLTKNGDKIGT---AQQQEGRVHLESNTLAVLSGLASQERGEQAMDAVD--- 602

Query: 489 AELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVE 548
             L +   L +  P+          G   +       NG  +        VA  K+ R +
Sbjct: 603 EHLFSPYGLHLNAPSF--STPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKLGRGD 660

Query: 549 IA 550
            A
Sbjct: 661 RA 662

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query643
2z07_A420 Putative uncharacterized protein TTHA0978; unchara 100.0
3c68_A761 Uncharacterized protein YGJK; GH63, processing alp 100.0
2jg0_A535 Periplasmic trehalase; family 37, hydrolase, inhib 100.0
3qde_A811 Cellobiose phosphorylase; cellulase, phosphate, tr 99.97
3rrs_A822 Cellobiose phosphorylase; GH94, alpha barrel, disa 99.97
1v7w_A807 Chitobiose phosphorylase; beta-sandwich, (alpha/al 99.96
2okx_A956 Rhamnosidase B; alpha barrel, glycoside hydrolase 99.91
3cih_A739 Putative alpha-rhamnosidase; structural genomics, 99.9
1lf6_A684 Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica 99.84
1ulv_A 1020 Glucodextranase; GH family 15, (alpha-alpha)6-barr 99.83
2fba_A492 Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy 99.39
1gai_A472 Glucoamylase-471; hydrolase, glycosidase, polysacc 99.36
2p0v_A489 Hypothetical protein BT3781; alpha-beta protein, s 99.35
2vn4_A 599 Glucoamylase; hydrolase, carbohydrate binding, gly 99.35
3qry_B426 Putative uncharacterized protein; alpha-alpha six 99.05
3p2c_A463 Putative glycosyl hydrolase; structural genomics, 99.04
3qt9_A427 Putative uncharacterized protein CPE0426; alpha-al 99.02
2rdy_A803 BH0842 protein; PSI-II, structural genomics, prote 92.77
1h54_A754 Maltose phosphorylase; hydrolase, maltose metaboli 92.39
2eab_A899 Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifi 91.53
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 87.16
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
Probab=100.00  E-value=3.4e-35  Score=315.98  Aligned_cols=344  Identities=14%  Similarity=0.125  Sum_probs=251.7

Q ss_pred             chHHHHHHHHHHHhhccccCCcceeeeccCCCCccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHh-hhhcccc
Q 006488          156 KSVEDEAWDLLRESIVYYCGNPVGTIAANDPNDSTILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ-LQSWEKT  234 (643)
Q Consensus       156 ~~~~~~A~~~Lr~~~v~~~~~p~G~~Aa~d~~~a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~-LQ~~e~~  234 (643)
                      +++.++|+..|+.     |.+..+++|+     .  -+|+..|+||+.+.+++++.. +++.+++.|..++. .|     
T Consensus         2 ~~l~~~a~~~l~~-----n~~~~~~vP~-----~--~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q-----   63 (420)
T 2z07_A            2 APLRTKAVEVLQR-----NSRGAFTVPA-----H--GLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQ-----   63 (420)
T ss_dssp             -CHHHHHHHHHHH-----HBCSSCBCSS-----T--TCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHC-----
T ss_pred             hHHHHHHHHHHHH-----cCCCCCcCCC-----C--CCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH-----
Confidence            3588999999998     5455455554     1  389999999999999998765 68888887766654 43     


Q ss_pred             ccCCCCCCCCCCCccccccccCCCCCCCcccccCCC-CCC-CCC-CccCCCChHHHHHHHHHHHHHHhCC----HhHHHh
Q 006488          235 MDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPD-FGE-AAI-GRVAPVDSGLWWIILLRAYGKCSGD----LSVQER  307 (643)
Q Consensus       235 ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd-~Ge-~a~-~~ygsVDAtLWwIial~~Y~~~TGD----~afl~~  307 (643)
                           ..+|.||+.+  -+.+.|.   +   +..++ .|. .+. .++.++|.++++++++++|+++|||    .+|+++
T Consensus        64 -----~~~G~ip~~v--~~~~~~~---y---~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~  130 (420)
T 2z07_A           64 -----GPDGMLPHIV--FHEQSRD---Y---FPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARY  130 (420)
T ss_dssp             -----CTTCCCCSEE--ECCSCCC---C---C-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             -----hhCCCcceec--ccCCCcc---c---CcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHH
Confidence                 3789999743  2211110   0   00011 111 111 2457899999999999999999999    999998


Q ss_pred             hhcHHHHHHHHHHHHhCCCCCCCceee------cCCC----cccccc----cC---------------------------
Q 006488          308 VDVQTGIKMILKLCLADGFDMFPTLLV------TDGS----CMIDRR----MG---------------------------  346 (643)
Q Consensus       308 l~~~p~i~~iL~w~l~~gf~~~~~lLv------~dG~----~w~D~r----~~---------------------------  346 (643)
                      +  .|.|++.++|+...+ +....+++      .+|.    .|.|..    .+                           
T Consensus       131 ~--~p~l~~~~~~~~~~~-d~~~~Gl~~~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~  207 (420)
T 2z07_A          131 L--FPKLLAFHRWLYHAR-DPYRTGLVVIVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRY  207 (420)
T ss_dssp             H--HHHHHHHHHHHHHHH-CTTCCSCCCBSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHH
T ss_pred             H--HHHHHHHHHHHhcCC-CCCCCCceeeecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHH
Confidence            7  999999999998521 01112221      1232    344420    00                           


Q ss_pred             ----------------------CCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhchhhh
Q 006488          347 ----------------------IHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKL  404 (643)
Q Consensus       347 ----------------------r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~~Lk~~~~~~FW~d~~~l  404 (643)
                                            ..+.||++||++|.+++.+++|++.++.+   ++++.++++.+++.|++ ||+++++.
T Consensus       208 ~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~~---a~~~~~~a~~~~~ai~~-~Wd~~~g~  283 (420)
T 2z07_A          208 LSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQED---PYEIEEWIVRGEVGLEA-LWDREAGF  283 (420)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHH-TEETTTTE
T ss_pred             HHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHH-hhCcccCe
Confidence                                  11347899999999999999999987544   67799999999999999 99877665


Q ss_pred             hhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCccCcccccccchhhHhcCCCCHHHHHHHHHHH
Q 006488          405 NEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLI  484 (643)
Q Consensus       405 ~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~~d~r~~slGN~LAL~sglld~eqa~~Vv~~l  484 (643)
                      +..|...                                      +....+  .....+++++++|+++++++++|++.|
T Consensus       284 ~~d~~~~--------------------------------------~g~~~~--~~~~~~~~pL~~g~~~~~~a~~v~~~l  323 (420)
T 2z07_A          284 YFSWDLV--------------------------------------AGEPIA--VKTSAGFLPLFAGTPHQGRASLLAQEA  323 (420)
T ss_dssp             ECCEETT--------------------------------------TTEECC--CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred             eEeeeCC--------------------------------------CCCeec--cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence            4322100                                      000001  224567889999999999999999998


Q ss_pred             HHhHHHhh--ccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Q 006488          485 EAKWAELV--ADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNRVEIAEKAVKLAERHIS  562 (643)
Q Consensus       485 ~~~w~~L~--tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~k~G~~~~A~~ll~~~~~~l~  562 (643)
                      .    +++  +++||+++.|            +++.++|.+||||+|||+++++++.||.++|+.++|.+++......+.
T Consensus       324 ~----~~~~~~~~gi~t~~~------------~~~~y~~~~yw~gpvW~~~~~~~~~gL~~~G~~~~A~~l~~~~~~~~~  387 (420)
T 2z07_A          324 E----RWGEKARYLLPSVDP------------TSPFFEPGRYWRGPVWINVNWMVAEGFRDYGFAALAARLKADALALME  387 (420)
T ss_dssp             H----HHTTTCSSSCBSBCT------------TSTTCCTTSTTSSCBCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             H----HHhccCCCCcCcCCC------------cCcccCCcCCCCCCcchhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence            5    677  8999999877            366788999999999999999999999999999999999876666555


Q ss_pred             CCCCCccccCCCCCCCCCCCCccchHHHHHHHHH
Q 006488          563 GDKWPEYYDTKRGRFIGKQSRLYQTWSIAGYLVA  596 (643)
Q Consensus       563 ~~~~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a  596 (643)
                      ..++.|.||+.+|.|.|+.   +|+||+|.+|.+
T Consensus       388 ~~~~~E~yd~~~g~~~g~~---~fgWs~~~~l~l  418 (420)
T 2z07_A          388 REGFREYYDPLTGQGRGGE---GFSWSAALALFW  418 (420)
T ss_dssp             HHCSEEEECTTTCCEEEEE---SCHHHHHHHHHH
T ss_pred             cCCeeeeeCCCCCCcCCCC---CCchHHHHHHHH
Confidence            5788999999998887755   999999998765
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Back     alignment and structure
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum} Back     alignment and structure
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A* Back     alignment and structure
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Back     alignment and structure
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Back     alignment and structure
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A* Back     alignment and structure
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A* Back     alignment and structure
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A Back     alignment and structure
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A* Back     alignment and structure
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8 Back     alignment and structure
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A* Back     alignment and structure
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A* Back     alignment and structure
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A* Back     alignment and structure
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A Back     alignment and structure
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125} Back     alignment and structure
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3 Back     alignment and structure
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 643
d1v7wa1531 a.102.1.4 (A:271-801) Chitobiose phosphorylase Chb 5e-12
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Length = 531 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Glycosyltransferase family 36 C-terminal domain
domain: Chitobiose phosphorylase ChbP
species: Vibrio proteolyticus [TaxId: 671]

 Score = 66.1 bits (160), Expect = 5e-12
 Identities = 50/366 (13%), Positives = 92/366 (25%), Gaps = 51/366 (13%)

Query: 194 YDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCHSPGQGLMPASFKVRT 253
              +  RD     I+       ++ R  I+  L+ Q                P    V  
Sbjct: 73  RTGLGYRDTAQDAISVPH-ANPEMTRKRIVDLLRGQVKAGYGLHLFDPDWFDPEKEDVAP 131

Query: 254 VPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLS-VQERVDVQT 312
                  S T      D  +    +    D  LW I  +  Y   +G+ S   + +    
Sbjct: 132 -----SKSPTVVPTPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYAD 186

Query: 313 GIKMILKLCLADGFDMFPTLLVTDGSCMI------DRRMGIHGHPLEIQALFYSALLSAR 366
           G +  +   +    D     +   G C        D      G    +  L + AL    
Sbjct: 187 GGEASVYEHMKAALDFSAEYVGQTGICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFI 246

Query: 367 EMLTPEDGSADLIRALNNRLVALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIY 426
           ++     G    +         +      + W                            
Sbjct: 247 DLAK-FLGKDQDVNTYTEMAANVREACETHLWD--------------------------- 278

Query: 427 PDQIPPWLVEFMPHIGGYLIGNLQPAHMDFRFFSLGNLWSVVSSLATVDQSHAILDLIEA 486
                     ++  +             + R     N  +V+S LA+ ++    +D   A
Sbjct: 279 -----DEGGWYIRGLTKNGDKIGTAQQQEGRVHLESNTLAVLSGLASQERGEQAMD---A 330

Query: 487 KWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACIKMNR 546
               L +   L +  P+       I   +  +       NG  +        VA  K+ R
Sbjct: 331 VDEHLFSPYGLHLNAPSFSTPNDDIGFVT--RVYQGVKENGAIFSHPNPWAWVAETKLGR 388

Query: 547 VEIAEK 552
            + A K
Sbjct: 389 GDRAMK 394

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query643
d1lf6a1397 Bacterial glucoamylase, C-terminal domain {Thermoa 99.94
d2jg0a1511 Periplasmic trehalase TreA {Escherichia coli [TaxI 99.92
d1v7wa1531 Chitobiose phosphorylase ChbP {Vibrio proteolyticu 99.91
d1ulva1413 Glucodextranase, domain A {Arthrobacter globiformi 99.84
d2fbaa1492 Glucoamylase {Yeast (Saccharomycopsis fibuligera) 99.14
d1gaia_472 Glucoamylase {Aspergillus awamori, variant x100 [T 98.99
d2p0va1443 Hypothetical protein BT3781 {Bacteroides thetaiota 98.18
d2nvpa1426 Hypothetical protein CPF0428 {Clostridium perfring 98.08
d1h54a1485 Lactobacillus maltose phosphorylase, central domai 94.21
>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Bacterial glucoamylase C-terminal domain-like
domain: Bacterial glucoamylase, C-terminal domain
species: Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]

Probab=99.94  E-value=2.1e-25  Score=234.45  Aligned_cols=361  Identities=14%  Similarity=0.048  Sum_probs=239.2

Q ss_pred             cchHHHHHHHHHHHhhccccCCc-ceeeeccCCCC------ccccCCCccccchhHHHHHHhhccCChHHHHHHHHHHHh
Q 006488          155 AKSVEDEAWDLLRESIVYYCGNP-VGTIAANDPND------STILNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQ  227 (643)
Q Consensus       155 ~~~~~~~A~~~Lr~~~v~~~~~p-~G~~Aa~d~~~------a~~~~Y~~vfGRDt~Isalg~L~~G~peiaR~~L~~~l~  227 (643)
                      ..+++++++-.|+.+.   +.++ -+++|+.+++-      ..-..|.-+|+||+.|++.+++..|++++++.+|..+++
T Consensus         7 ~~~~~~~s~~~lk~~~---~~~~~GaiiAsptt~~~e~~~~~~~~~Y~y~W~RDaa~~~~al~~~G~~~~a~~~l~~l~~   83 (397)
T d1lf6a1           7 ANSLYYNSMMILKASE---DKTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAK   83 (397)
T ss_dssp             CCHHHHHHHHHHHTTB---CSSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcc---CCCCCceEEEeCCCCcccccCCCCCCCCeeEcHhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            3589999999998642   3344 45555544321      112468899999999999999889999999999998887


Q ss_pred             hhhccccccCCCCCCCCCCCccccccccCCCCCCCcccccCCCCCCCCCCccCCCChHHHHHHHHHHHHHHhCCHhHHHh
Q 006488          228 LQSWEKTMDCHSPGQGLMPASFKVRTVPLDGDDSATEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLSVQER  307 (643)
Q Consensus       228 LQ~~e~~ld~~q~~~GliP~~fKi~~~~~r~~~~~~~~~l~pd~Ge~a~~~ygsVDAtLWwIial~~Y~~~TGD~afl~~  307 (643)
                      .|.          .+|.+|+.+-+                   .|+.+ +.....|++.|+|+++++|.+.+..      
T Consensus        84 ~~~----------~~G~~~~~~~~-------------------~G~~~-~~~~q~D~~g~~i~a~~~~~~~~~~------  127 (397)
T d1lf6a1          84 VVK----------DNGMIPQNTWI-------------------SGKPY-WTGIQLDEQADPIILSYRLKRYDLY------  127 (397)
T ss_dssp             HHH----------HHSSCCSCBCT-------------------TSCBC-CCCCCHHHHHHHHHHHHHTTCGGGT------
T ss_pred             Hhc----------ccCCCCCCCCc-------------------CCCcc-ccCCCCchHHHHHHHHHHHHhcchh------
Confidence            776          45777876511                   12211 1224789999999999999865432      


Q ss_pred             hhcHHHHHHHHHHHHhCCCCCCCceeecCCCcccccccCCCCCchhhHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 006488          308 VDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALLSAREMLTPEDGSADLIRALNNRLV  387 (643)
Q Consensus       308 l~~~p~i~~iL~w~l~~gf~~~~~lLv~dG~~w~D~r~~r~G~pVEIQALwY~AL~~aaeLa~~~~g~~~~a~~l~~ra~  387 (643)
                         ++.++.+++++...       ...++...|.    .+.|+..+.++.+|.||++++.++... ++...+..+.+.+.
T Consensus       128 ---~~~i~~~~~~l~~~-------~~~~~~~lWE----e~~g~~~~t~~~~~~aL~~~a~la~~~-g~~~~a~~~~~~A~  192 (397)
T d1lf6a1         128 ---DSLVKPLADFIIKI-------GPKTGQERWE----EIGGYSPATMAAEVAGLTCAAYIAEQN-KDYESAQKYQEKAD  192 (397)
T ss_dssp             ---TTTHHHHHHHHHHH-------CSSBSSCTTS----SCCBBCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHHh-------CCCCcccccc----ccCCcccchhHHHHHHHHHHHHHHHhc-CChhHHHHHHHHHH
Confidence               55577788888752       1223444575    346788999999999999999999974 67788889999999


Q ss_pred             HHHHHHHHHhhhchhhhhhhhhccccchhhhhhcccCCCCCCCCccccccccCCCceeeecccCCc---cCcccccccch
Q 006488          388 ALSFHIREYYWIDMKKLNEIYRYKTEEYSYDAVNKFNIYPDQIPPWLVEFMPHIGGYLIGNLQPAH---MDFRFFSLGNL  464 (643)
Q Consensus       388 ~Lk~~~~~~FW~d~~~l~~iyr~~~e~y~~~a~~~~n~~pdsip~~l~~f~~~~ggYL~~~v~p~~---~d~r~~slGN~  464 (643)
                      .|+..|.++||.++...+...     .|..   ...+..+            .. +......++..   .+..+|+ +.+
T Consensus       193 ~i~~~i~~~~~~~~~~~~~~~-----~~~r---~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~lDa-sll  250 (397)
T d1lf6a1         193 NWQKLIDNLTYTENGPLGNGQ-----YYIR---IAGLSDP------------DA-DFMINIANGGGVYDQKEIVDP-SFL  250 (397)
T ss_dssp             HHHHHHHHHHEESSCSSTTSC-----EECS---CBSSSCT------------TS-CCEEEETTTTEEEEGGGCCCG-GGG
T ss_pred             HHHHHHHHhccCccccccccc-----ceec---cccccCc------------cc-cccccccccccccccCCCcCH-HHh
Confidence            999999999998765432210     0000   0000000            00 11111111111   0111232 233


Q ss_pred             hhHhcCCCCH--HHHHHHHHHHHHhHHHhhccCCCcccCCCcCCCCceeecCCCCCCCCCccccCCCccchHHHHHHHHH
Q 006488          465 WSVVSSLATV--DQSHAILDLIEAKWAELVADMPLKICYPALEGQEWRIITGSDPKNTPWSYHNGGSWPTLLWQLTVACI  542 (643)
Q Consensus       465 LAL~sglld~--eqa~~Vv~~l~~~w~~L~tp~gLR~l~P~~~~~~wr~~~~gd~~~~P~sYHNG~VWP~l~~~~a~Al~  542 (643)
                      +.+.+|++++  ++....++.+.+   +|..+.|+....+......   +......+.+..+|+|..||.....++.++.
T Consensus       251 ~~~~~g~~~~~d~~~~~tl~~i~~---~l~~~~g~~~~~~RY~~D~---y~~~~~~~~~~~~~~g~pW~i~T~~~a~~~~  324 (397)
T d1lf6a1         251 ELVRLGVKSADDPKILNTLKVVDS---TIKVDTPKGPSWYRYNHDG---YGEPSKTELYHGAGKGRLWPLLTGERGMYEI  324 (397)
T ss_dssp             HHHHTTSSCTTCHHHHHHHHHHHH---HSEEEETTEEEECSSTTCC---CSCSBTTBCCSSSSCCCBBHHHHHHHHHHHH
T ss_pred             hccccCCCCCCCHHHHHHHHHHHH---HhccCCCcccccccccccc---ccccCCcCCccCCcCCchHHHHHHHHHHHHH
Confidence            4456777654  455555555554   7878888775544322111   2222333456677888888877888899999


Q ss_pred             HcCCHHHHHHHHHHHHHHhcCCC-CCccccCCCCCCCCCCCCccchHHHHHHHHHHHHhc
Q 006488          543 KMNRVEIAEKAVKLAERHISGDK-WPEYYDTKRGRFIGKQSRLYQTWSIAGYLVAKLLLD  601 (643)
Q Consensus       543 k~G~~~~A~~ll~~~~~~l~~~~-~pE~FDG~~g~p~G~~Ac~~QAWSaA~~L~a~~lL~  601 (643)
                      +.|+  .|+.+++.+..+....+ |||.||+.+|.|.|.  +.+||||.|++|++.+.|.
T Consensus       325 ~~g~--~A~~~l~~~~~~~~~~G~l~E~~d~~tG~~~g~--a~plaWS~A~~i~~~~~l~  380 (397)
T d1lf6a1         325 AAGK--DATPYVKAMEKFANEGGIISEQVWEDTGLPTDS--ASPLNWAHAEYVILFASNI  380 (397)
T ss_dssp             HTTC--CCHHHHHHHHHHSCTTSCCCSCBCTTTCCBCSS--CSSCHHHHHHHHHHHHHHH
T ss_pred             HccH--HHHHHHHHHHHhcCCCCccceeecCCCCCcCCC--CccHHHHHHHHHHHHHHHh
Confidence            9886  68888888777655444 799999999999873  4599999999999877665
>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]} Back     information, alignment and structure
>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2fbaa1 a.102.1.1 (A:1-492) Glucoamylase {Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]} Back     information, alignment and structure
>d1gaia_ a.102.1.1 (A:) Glucoamylase {Aspergillus awamori, variant x100 [TaxId: 105351]} Back     information, alignment and structure
>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1h54a1 a.102.1.4 (A:269-753) Lactobacillus maltose phosphorylase, central domain {Lactobacillus brevis [TaxId: 1580]} Back     information, alignment and structure