Citrus Sinensis ID: 006493

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640---

MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFLTPS

cccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHccEEEEEEcccEEEEEccEEcccccEEEEccccccccEEEEEEEccccccEEEEccccccccccccccccccccccccHHHHccccEEEEcccccccccEEEEEEEEccEEEEcccccEEEcccccccccEEEEEEEEcccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccccEEEcccccccccccEEEEEEEEccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccEEEEEEcccEEEEEEEccccccccEEEEEEEEEcccccccEEEEEEEEcccccEEEEEccccHHcHHHHccccccc

ccccccHHHEcHcHcEEcccccccccccccccccccEEEEEccccHccccccccccccEEccEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEEEEEEEEEEccEEEEEcccccccEEEEEEccccccEEEEEEcccccccccHHHHccccHcccccHHHHHHccEEEEEccccccccEEEEEEEEcccEccccHcHEEEcccEEccccEEEEEEEEEccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHHHHHHHHHHHHccccccccEEccccHHHHHccEEEEEEcccccccccEEEEEEEEEccEEccccccHHHHHHHHHcccccccccccccccccccccccEcccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccEEEEEccccHHHHHHHHHHHcccEEEEccccEEEEEEEcccccccEEEEEEEEEEEEccccccEEEEEEEccccEEEEEEccccHHHHHHHccccccc

mtrgriraKLRRSQlytfaclrphvnetegsvqgcprviycnqphmhkkrplkyctNYISttkynffsyfpkaLFEQFNRVANIYFLIAALLsvtplspfspvsmlLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVgngvfsykpwekiqvgdivkvekdqffpadllFLSSSYEDGICYVEtmnldgetnLKVKRAMeatsplnedeafkeftgtvkcenpnpslytfvgnieydrelyaidpsqillrdsklrntAHVYGSVIFtghdskvmqnattspskrsgiekKMDKIIFILFAILVLISLISSIGFAVKInyqtpqwwylkpketdvyfnpgkplvpgLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFInqdismyddesgipaqarTSNLneelgqvdtilsdktgtltcnQMDFLKCSvagtaygvspSEVELAAAKQMAIDLEEQNRESanakhknsgseieletvitsndgndfkrrikgfnfedsrlmdgnwlkepnvdtLLLFFRILAICHTAipelneetgnltyeaespdEAAFLVAAREFGFEFYRRTQSsvfireryppkgqpveREFKILNLLdftskrkrmsvivrdeDGQILLLCKGadrlaspllfnfltps

mtrgriraklrrsqlytfaclrphvnetegsvqgcpRVIYCnqphmhkkrPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSvhvgngvfsykpweKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEftgtvkcenpnpSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSViftghdskvmqnattspskrsgieKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESanakhknsgseieletvitsndgndfkRRIKGFnfedsrlmdgnwLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTqssvfireryppkgqpverefkilnlldftskrkrmsvivrdEDGQILLLCKGADRLASPLLFNFLTPS

MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKiifilfailvlislissigfAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFLTPS

***********RSQLYTFACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLK****************FKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGH*********************MDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYD*****************LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVS***********************************************DFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL***

**************************************IYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQD***NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSP*NEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQN*******RSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEV*********************************************KRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPEL***************EAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPL*FN*****

MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVM***********GIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQ**************EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFLTPS

******RAKLRRSQLYTFACLRPH*********GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQM*****************************************KGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFN*****

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MTRGRIRAKLRRSQLYTFACLRPHVNETEGSVQGCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVExxxxxxxxxxxxxxxxxxxxxxxxNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFLTPS

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		643	2.2.26 [Sep-21-2011]
Q9LNQ4		1216	Putative phospholipid-tra	yes	no	0.972	0.513	0.676	0.0
Q9SGG3		1228	Putative phospholipid-tra	no	no	0.976	0.511	0.667	0.0
Q9LVK9		1243	Putative phospholipid-tra	no	no	0.961	0.497	0.669	0.0
Q9SLK6		1240	Phospholipid-transporting	no	no	0.964	0.5	0.665	0.0
Q9LI83		1202	Phospholipid-transporting	no	no	0.931	0.498	0.552	0.0
Q9SX33		1200	Putative phospholipid-tra	no	no	0.947	0.507	0.538	0.0
Q9SAF5		1203	Putative phospholipid-tra	no	no	0.948	0.507	0.545	0.0
Q9LK90		1189	Putative phospholipid-tra	no	no	0.936	0.506	0.532	0.0
P57792		1184	Putative phospholipid-tra	no	no	0.940	0.510	0.524	0.0
Q9XIE6		1213	Phospholipid-transporting	no	no	0.884	0.469	0.468	1e-157

>sp\|Q9LNQ4\|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2	Back alignment and function desciption

 Score =  910 bits (2353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/636 (67%), Positives = 517/636 (81%), Gaps = 11/636 (1%)

Query: 1   MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
           M RGRIR+KLR S +YTF CLRP  +E +    +QG    R +YCNQPHMHKK+PLKY +
Sbjct: 1   MARGRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRS 60

Query: 57  NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
           NY+STT+YN  ++FPK L+EQF+R AN YFL+AA+LSV PLSPF+  SM+ PL  VVG+S
Sbjct: 61  NYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120

Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
           M KEALEDW RFMQD ++NA KV VH  +G F  + W+KI VGDIVKVEKD FFPADLL 
Sbjct: 121 MLKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLL 180

Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
           LSSSYEDGICYVETMNLDGETNLKVKR++E T  L++ ++FK+FTG ++CE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTF 240

Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
           VGN+EY+R+++ +DPSQILLRDSKLRNT +VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct: 241 VGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300

Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
            MD II+ L  +L+LIS ISS GFA +  +  P+WWYL+P+E +   NP  P+  G  HL
Sbjct: 301 TMDYIIYTLLVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHL 360

Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
           +TAL+LYGYLIPISLYVSIE+VK LQA FIN+D+ MYD ESG+PA ARTSNLNEELGQVD
Sbjct: 361 ITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVD 420

Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESA-NAKHK 475
           TILSDKTGTLTCNQMDFLKCS+AGT+YGV  SEVE+AAA+QMA+DL+E    S+  +  +
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPR 480

Query: 476 NSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
               +IE+E+ IT       +  IKGF FED RLMDGNWL+EP+ D +LLFFRILAICHT
Sbjct: 481 AQARDIEVESSITP------RIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHT 534

Query: 536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
           AIPELNEETG  TYEAESPDEA+FL AA EFGF F++RTQSSV++ ER    GQ +ERE+
Sbjct: 535 AIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREY 594

Query: 596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRL 631
           K+LNLLDFTSKRKRMSV+VRDE+GQILLLCKGAD +
Sbjct: 595 KVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSI 630

Involved in transport of phospholipids.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1

>sp\|Q9SGG3\|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1	Back alignment and function description

>sp\|Q9LVK9\|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3	Back alignment and function description

>sp\|Q9SLK6\|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2	Back alignment and function description

>sp\|Q9LI83\|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1	Back alignment and function description

>sp\|Q9SX33\|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1	Back alignment and function description

>sp\|Q9SAF5\|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1	Back alignment and function description

>sp\|Q9LK90\|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1	Back alignment and function description

>sp\|P57792\|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1	Back alignment and function description

>sp\|Q9XIE6\|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		643
255560731		1231	Phospholipid-transporting ATPase, putati	0.981	0.512	0.736	0.0
359482803		1229	PREDICTED: putative phospholipid-transpo	0.981	0.513	0.716	0.0
357454575		1224	Aminophospholipid ATPase [Medicago trunc	0.975	0.512	0.706	0.0
356522182		1224	PREDICTED: putative phospholipid-transpo	0.978	0.513	0.697	0.0
224134621		1227	aminophospholipid ATPase [Populus tricho	0.981	0.514	0.732	0.0
307136290		1096	phospholipid-transporting ATPase [Cucumi	0.962	0.564	0.726	0.0
449447866		1237	PREDICTED: putative phospholipid-transpo	0.962	0.500	0.721	0.0
356550414		1224	PREDICTED: putative phospholipid-transpo	0.959	0.504	0.710	0.0
224128678		1201	aminophospholipid ATPase [Populus tricho	0.951	0.509	0.737	0.0
356525995		1224	PREDICTED: putative phospholipid-transpo	0.981	0.515	0.703	0.0

>gi\|255560731\|ref\|XP_002521379.1\| Phospholipid-transporting ATPase, putative [Ricinus communis] gi\|223539457\|gb\|EEF41047.1\| Phospholipid-transporting ATPase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  973 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/646 (73%), Positives = 546/646 (84%), Gaps = 15/646 (2%)

Query: 1   MTRGRIRAKLRRSQLYTFACLRPHVNETEG----SVQGCPRVIYCNQPHMHKKRPLKYCT 56
           MTRGRIRA+LRRS L+ F+C+RP     E        G  R+++CNQP MH+K+PLKYC+
Sbjct: 1   MTRGRIRARLRRSHLHPFSCMRPRTEHDEAPHPIEGPGYSRMVHCNQPSMHRKKPLKYCS 60

Query: 57  NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
           NYISTTKYN  ++ PKALFEQF RVANIYFL+AA+LS+TP++PFS VSM+ PLA VVG+S
Sbjct: 61  NYISTTKYNVVTFLPKALFEQFRRVANIYFLLAAILSLTPVAPFSAVSMIFPLAFVVGIS 120

Query: 117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
           MAKEALEDWRRFMQD +VN RK SVH G+GVF YKPW+KIQVGD+VKVEKDQFFPADLL 
Sbjct: 121 MAKEALEDWRRFMQDMKVNTRKASVHTGDGVFQYKPWQKIQVGDVVKVEKDQFFPADLLL 180

Query: 177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
           LSSSYEDGICYVETMNLDGETNLK KRA+E T  L +DEAFK FTGTVKCE+PNPSLYTF
Sbjct: 181 LSSSYEDGICYVETMNLDGETNLKPKRALEVTLSLEDDEAFKNFTGTVKCEDPNPSLYTF 240

Query: 237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
           +GNIEY+R++Y +DPSQILLRDSKLRNTA VYG VIFTG DSKVMQN+T SPSKRS IE+
Sbjct: 241 IGNIEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGFDSKVMQNSTKSPSKRSRIER 300

Query: 297 KMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
           KMDKII+ILF+IL+LIS++SSIGFAVKI  Q P WWY++P + +  ++P  P+  GLAHL
Sbjct: 301 KMDKIIYILFSILLLISMMSSIGFAVKIKLQMPDWWYMQPSKPENLYDPDSPVKSGLAHL 360

Query: 357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
           +TALILYGYLIPISLYVSIE+VK  QA FI++D+ MYD+E+G  AQARTSNLNEELGQVD
Sbjct: 361 ITALILYGYLIPISLYVSIEVVKVCQAKFIDEDLHMYDEETGNTAQARTSNLNEELGQVD 420

Query: 417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
           TILSDKTGTLTCNQMDFLKCS+AGTAYGV  SEVELAAAKQ+A+DLEEQ+ E +N    N
Sbjct: 421 TILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQIAMDLEEQDDELSNGSRPN 480

Query: 477 SGS-----------EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLL 525
           S +           EIELETVITS D  D K  +KGF+FEDSRLMDGNWLKEPN D +LL
Sbjct: 481 SHTHNSWETRSGAPEIELETVITSKDERDQKPVLKGFSFEDSRLMDGNWLKEPNADVILL 540

Query: 526 FFRILAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYP 585
           FFRILAIC +A+PELNEETG+ TYEAESPDE AFLVAAREFGFEF +RTQSSVFI E+Y 
Sbjct: 541 FFRILAICQSAVPELNEETGSFTYEAESPDEGAFLVAAREFGFEFCKRTQSSVFICEKYA 600

Query: 586 PKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRL 631
             GQ VEREFK+LNLL+FTSKRKRMSVIVR+EDGQILL CKGAD +
Sbjct: 601 HPGQSVEREFKVLNLLEFTSKRKRMSVIVRNEDGQILLFCKGADSI 646

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359482803\|ref\|XP_003632843.1\| PREDICTED: putative phospholipid-transporting ATPase 4-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357454575\|ref\|XP_003597568.1\| Aminophospholipid ATPase [Medicago truncatula] gi\|355486616\|gb\|AES67819.1\| Aminophospholipid ATPase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356522182\|ref\|XP_003529726.1\| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max]	Back alignment and taxonomy information

>gi\|224134621\|ref\|XP_002327449.1\| aminophospholipid ATPase [Populus trichocarpa] gi\|222836003\|gb\|EEE74424.1\| aminophospholipid ATPase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|307136290\|gb\|ADN34117.1\| phospholipid-transporting ATPase [Cucumis melo subsp. melo]	Back alignment and taxonomy information

>gi\|449447866\|ref\|XP_004141687.1\| PREDICTED: putative phospholipid-transporting ATPase 4-like [Cucumis sativus] gi\|449480563\|ref\|XP_004155931.1\| PREDICTED: putative phospholipid-transporting ATPase 4-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356550414\|ref\|XP_003543582.1\| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max]	Back alignment and taxonomy information

>gi\|224128678\|ref\|XP_002329063.1\| aminophospholipid ATPase [Populus trichocarpa] gi\|222839734\|gb\|EEE78057.1\| aminophospholipid ATPase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356525995\|ref\|XP_003531605.1\| PREDICTED: putative phospholipid-transporting ATPase 4-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		643
TAIR\|locus:2007858		1216	AT1G17500 [Arabidopsis thalian	0.972	0.513	0.657	1.5e-227
TAIR\|locus:2020038		1240	AT1G54280 [Arabidopsis thalian	0.981	0.508	0.649	3.5e-226
TAIR\|locus:2030180		1228	AT1G72700 [Arabidopsis thalian	0.979	0.513	0.651	5.1e-225
TAIR\|locus:2088217		1243	AT3G13900 [Arabidopsis thalian	0.978	0.506	0.646	1.3e-224
TAIR\|locus:2102345		1202	AT3G25610 [Arabidopsis thalian	0.944	0.504	0.541	2.7e-180
TAIR\|locus:2026900		1200	AT1G68710 [Arabidopsis thalian	0.954	0.511	0.527	5.3e-175
TAIR\|locus:2031860		1203	ACA.l "autoinhibited Ca2+/ATPa	0.948	0.507	0.532	8.9e-173
TAIR\|locus:2025961		1213	ALA3 "aminophospholipid ATPase	0.692	0.366	0.461	6.3e-140
UNIPROTKB\|B7Z880		1123	ATP8A2 "cDNA FLJ61731, highly	0.617	0.353	0.445	1.1e-110
UNIPROTKB\|Q9NTI2		1148	ATP8A2 "Probable phospholipid-	0.617	0.345	0.445	1.1e-110

TAIR\|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2196 (778.1 bits), Expect = 1.5e-227, P = 1.5e-227
 Identities = 418/636 (65%), Positives = 502/636 (78%)

Query:     1 MTRGRIRAKLRRSQLYTFACLRPHVNETEGS--VQG--CPRVIYCNQPHMHKKRPLKYCT 56
             M RGRIR+KLR S +YTF CLRP  +E +    +QG    R +YCNQPHMHKK+PLKY +
Sbjct:     1 MARGRIRSKLRLSHIYTFGCLRPSADEGQDPHPIQGPGFSRTVYCNQPHMHKKKPLKYRS 60

Query:    57 NYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPLSPFSPVSMLLPLAIVVGVS 116
             NY+STT+YN  ++FPK L+EQF+R AN YFL+AA+LSV PLSPF+  SM+ PL  VVG+S
Sbjct:    61 NYVSTTRYNLITFFPKCLYEQFHRAANFYFLVAAILSVFPLSPFNKWSMIAPLVFVVGLS 120

Query:   117 MAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLF 176
             M KEALEDW RFMQD ++NA KV VH  +G F  + W+KI VGDIVKVEKD FFPADLL 
Sbjct:   121 MLKEALEDWSRFMQDVKINASKVYVHKSDGEFRRRKWKKISVGDIVKVEKDGFFPADLLL 180

Query:   177 LSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTF 236
             LSSSYEDGICYVETMNLDGETNLKVKR++E T  L++ ++FK+FTG ++CE+PNPSLYTF
Sbjct:   181 LSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTF 240

Query:   237 VGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKRSGIEK 296
             VGN+EY+R+++ +DPSQILLRDSKLRNT +VYG V+FTGHD+KVMQN+T SPSKRS IEK
Sbjct:   241 VGNLEYERQIFPLDPSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEK 300

Query:   297 KMDKXXXXXXXXXXXXXXXXXXXXAVKINYQTPQWWYLKPKETDVYFNPGKPLVPGLAHL 356
              MD                     A +  +  P+WWYL+P+E +   NP  P+  G  HL
Sbjct:   301 TMDYIIYTLLVLLILISCISSSGFAWETKFHMPKWWYLRPEEPENLTNPSNPVYAGFVHL 360

Query:   357 VTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVD 416
             +TAL+LYGYLIPISLYVSIE+VK LQA FIN+D+ MYD ESG+PA ARTSNLNEELGQVD
Sbjct:   361 ITALLLYGYLIPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVD 420

Query:   417 TILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKN 476
             TILSDKTGTLTCNQMDFLKCS+AGT+YGV  SEVE+AAA+QMA+DL+E    S+      
Sbjct:   421 TILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPR 480

Query:   477 SGS-EIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHT 535
             + + +IE+E+ IT       +  IKGF FED RLMDGNWL+EP+ D +LLFFRILAICHT
Sbjct:   481 AQARDIEVESSITP------RIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHT 534

Query:   536 AIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREF 595
             AIPELNEETG  TYEAESPDEA+FL AA EFGF F++RTQSSV++ ER    GQ +ERE+
Sbjct:   535 AIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREY 594

Query:   596 KILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRL 631
             K+LNLLDFTSKRKRMSV+VRDE+GQILLLCKGAD +
Sbjct:   595 KVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSI 630

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004012 "phospholipid-translocating ATPase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA;ISS

GO:0015914 "phospholipid transport" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0005886 "plasma membrane" evidence=IDA

TAIR\|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|B7Z880 ATP8A2 "cDNA FLJ61731, highly similar to Probable phospholipid-transporting ATPase IB (EC 3.6.3.1)" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9NTI2 ATP8A2 "Probable phospholipid-transporting ATPase IB" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.6.3.1	0.824
3rd Layer	3.6.3	0.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		643
TIGR01652		1057	TIGR01652, ATPase-Plipid, phospholipid-translocati	0.0
PLN03190		1178	PLN03190, PLN03190, aminophospholipid translocase;	1e-109
TIGR01494		543	TIGR01494, ATPase_P-type, ATPase, P-type (transpor	2e-53
COG0474		917	COG0474, MgtA, Cation transport ATPase [Inorganic	5e-43
COG0474		917	COG0474, MgtA, Cation transport ATPase [Inorganic	2e-15
pfam13246		91	pfam13246, Hydrolase_like2, Putative hydrolase of	2e-10
TIGR01494		543	TIGR01494, ATPase_P-type, ATPase, P-type (transpor	6e-07
TIGR01116		917	TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic	2e-06
pfam00122		222	pfam00122, E1-E2_ATPase, E1-E2 ATPase	6e-05
PRK15122		903	PRK15122, PRK15122, magnesium-transporting ATPase;	0.001
TIGR01517		944	TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-	0.002

>gnl\|CDD\|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase	Back alignment and domain information

 Score =  669 bits (1728), Expect = 0.0
 Identities = 269/586 (45%), Positives = 366/586 (62%), Gaps = 39/586 (6%)

Query: 54  YCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIV 112
           +C+N ISTTKY   ++ PK LFEQF R AN+YFL+ ALL   P LSP    + ++PLA V
Sbjct: 1   FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60

Query: 113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPA 172
           + V+  KEA+ED RR  +DKEVN R   V  G+G F   PW+ ++VGDIVKV+KD+  PA
Sbjct: 61  LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120

Query: 173 DLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPS 232
           DLL LSSS  DG+CYVET NLDGETNLK+++A+E T  + +++  K F+G ++CE PN S
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180

Query: 233 LYTFVGNIEY-DRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNATTSPSKR 291
           LY+F GN+       Y + P  ILLR   LRNT  V G V++TGHD+K+M+NAT +PSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240

Query: 292 SGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLVP 351
           S +EK+++ +I ILF +L ++ LISS+G  +  +      WY++        +       
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDV-----SERNAAAN 295

Query: 352 GLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEE 411
           G    +T LIL+  LIPISLYVS+E+VK +QA FIN D+ MY +++  PA  RTSNLNEE
Sbjct: 296 GFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEE 355

Query: 412 LGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESAN 471
           LGQV+ I SDKTGTLT N M+F KCS+AG +YG   +E++    +++   +E +N     
Sbjct: 356 LGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSM--- 412

Query: 472 AKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRILA 531
                                       KGF F D RL+D     +PN   +  FF  LA
Sbjct: 413 ------------------------LVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALA 448

Query: 532 ICHTAIPELNEE-TGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQP 590
           +CHT +PE N++    +TY+A SPDEAA + AAR+ GF F+ RT  S+ +          
Sbjct: 449 LCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEM----HG 504

Query: 591 VEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLL 636
             +E++ILN+L+F S RKRMSVIVR+ DG+I LLCKGAD +    L
Sbjct: 505 ETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRL 550

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057

>gnl\|CDD\|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional	Back alignment and domain information

>gnl\|CDD\|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC	Back alignment and domain information

>gnl\|CDD\|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit	Back alignment and domain information

>gnl\|CDD\|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC	Back alignment and domain information

>gnl\|CDD\|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase	Back alignment and domain information

>gnl\|CDD\|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase	Back alignment and domain information

>gnl\|CDD\|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional	Back alignment and domain information

>gnl\|CDD\|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		643
PLN03190		1178	aminophospholipid translocase; Provisional	100.0
KOG0206		1151	consensus P-type ATPase [General function predicti	100.0
TIGR01652		1057	ATPase-Plipid phospholipid-translocating P-type AT	100.0
KOG0210		1051	consensus P-type ATPase [Inorganic ion transport a	100.0
COG0474		917	MgtA Cation transport ATPase [Inorganic ion transp	100.0
KOG0202		972	consensus Ca2+ transporting ATPase [Inorganic ion	100.0
KOG0204		1034	consensus Calcium transporting ATPase [Inorganic i	100.0
TIGR01523		1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	100.0
TIGR01106		997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	100.0
TIGR01116		917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	100.0
TIGR01522		884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	100.0
TIGR01657		1054	P-ATPase-V P-type ATPase of unknown pump specifici	100.0
TIGR01517		941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	100.0
PRK10517		902	magnesium-transporting ATPase MgtA; Provisional	100.0
TIGR01647		755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	100.0
TIGR01524		867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	100.0
PRK15122		903	magnesium-transporting ATPase; Provisional	100.0
KOG0208		1140	consensus Cation transport ATPase [Inorganic ion t	100.0
KOG0203		1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	100.0
KOG0205		942	consensus Plasma membrane H+-transporting ATPase [	100.0
KOG0209		1160	consensus P-type ATPase [Inorganic ion transport a	100.0
PRK01122		679	potassium-transporting ATPase subunit B; Provision	100.0
TIGR01497		675	kdpB K+-transporting ATPase, B subunit. One sequen	100.0
PRK14010		673	potassium-transporting ATPase subunit B; Provision	100.0
TIGR01494		499	ATPase_P-type ATPase, P-type (transporting), HAD s	100.0
TIGR01525		556	ATPase-IB_hvy heavy metal translocating P-type ATP	100.0
TIGR01511		562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	100.0
PRK11033		741	zntA zinc/cadmium/mercury/lead-transporting ATPase	100.0
TIGR01512		536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	100.0
COG2217		713	ZntA Cation transport ATPase [Inorganic ion transp	100.0
PRK10671		834	copA copper exporting ATPase; Provisional	100.0
KOG0207		951	consensus Cation transport ATPase [Inorganic ion t	100.0
PF00122		230	E1-E2_ATPase: E1-E2 ATPase p-type cation-transport	99.98
COG2216		681	KdpB High-affinity K+ transport system, ATPase cha	99.92
PF13246		91	Hydrolase_like2: Putative hydrolase of sodium-pota	99.77
smart00831		64	Cation_ATPase_N Cation transporter/ATPase, N-termi	97.43
PF00690		69	Cation_ATPase_N: Cation transporter/ATPase, N-term	97.31
PF00702		215	Hydrolase: haloacid dehalogenase-like hydrolase; I	96.67
KOG4383		1354	consensus Uncharacterized conserved protein [Funct	88.27
TIGR01657		1054	P-ATPase-V P-type ATPase of unknown pump specifici	81.03

>PLN03190 aminophospholipid translocase; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.7e-95  Score=860.16  Aligned_cols=566  Identities=35%  Similarity=0.548  Sum_probs=467.0

Q ss_pred             CCCeEEEeCCCCccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCchhhhHHHHHH
Q 006493           34 GCPRVIYCNQPHMHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTP-LSPFSPVSMLLPLAIV  112 (643)
Q Consensus        34 ~~~r~~~~~~~~~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~-~~~~~~~~~~~~l~~v  112 (643)
                      ...|.|++|++... ..+.+|++|.|.++||++|+|||+.||+||++++|+|||++++++++| +++.+++++++||+++
T Consensus        68 ~~~r~i~~~~~~~~-~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~v  146 (1178)
T PLN03190         68 EDARLVYLNDPEKS-NERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFV  146 (1178)
T ss_pred             CCceEEEcCCCCcc-cccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHH
Confidence            35899999997422 234579999999999999999999999999999999999999999999 8888999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhcceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccC
Q 006493          113 VGVSMAKEALEDWRRFMQDKEVNARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMN  192 (643)
Q Consensus       113 l~i~~i~~~~~~~~~~k~~~~~n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~  192 (643)
                      ++++++++++||++|+++|+++|++.++|+ ++|++++++|++|+|||||+|++||.||||++||++++++|.|+||||+
T Consensus       147 l~v~~ike~~Ed~~r~k~d~~~N~~~~~v~-~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~  225 (1178)
T PLN03190        147 LLVTAVKDAYEDWRRHRSDRIENNRLAWVL-VDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTIN  225 (1178)
T ss_pred             HHHHHHHHHHHHHHHHHhHHhhcCcEEEEE-ECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccc
Confidence            999999999999999999999999999999 8999999999999999999999999999999999999999999999999


Q ss_pred             CCCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEE
Q 006493          193 LDGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVI  272 (643)
Q Consensus       193 LtGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv  272 (643)
                      |||||+|+.|.+++.+...  .....++.|.++||.||++++.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+
T Consensus       226 LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVV  303 (1178)
T PLN03190        226 LDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAV  303 (1178)
T ss_pred             cCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEE
Confidence            9999999999987655321  12234578999999999999999999999999999999999999999999999999999


Q ss_pred             EeccccceecccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccc-------cCC
Q 006493          273 FTGHDSKVMQNATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVY-------FNP  345 (643)
Q Consensus       273 ~tG~~Tk~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~-------~~~  345 (643)
                      |||++||++++....+.|+|++|+.+|+++.+++++++++|++++++..+|.....+..||+........       ++.
T Consensus       304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  383 (1178)
T PLN03190        304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY  383 (1178)
T ss_pred             EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence            9999999999999989999999999999999999999999999988877775433344455432110000       000


Q ss_pred             CCCchhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCc
Q 006493          346 GKPLVPGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGT  425 (643)
Q Consensus       346 ~~~~~~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGT  425 (643)
                      .......+..|+.+++++..+||++|++++++++++|+++|.+|.+||+++.+.++.||+++.+|+||+|+|||+|||||
T Consensus       384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT  463 (1178)
T PLN03190        384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT  463 (1178)
T ss_pred             chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence            00112335577788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCceEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcC
Q 006493          426 LTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFE  505 (643)
Q Consensus       426 LT~n~m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (643)
                      ||+|+|+|++|+++|..|+.+....+.... ...                     .....         ...........
T Consensus       464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~---------------------~~~~~---------~~~~~~~~~~~  512 (1178)
T PLN03190        464 LTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYS---------------------VEVDG---------KILRPKMKVKV  512 (1178)
T ss_pred             cccceEEEEEEEECCEEcccccccchhhhh-ccc---------------------ccccc---------ccccccccccC
Confidence            999999999999999999753221110000 000                     00000         00000000011


Q ss_pred             cchhcccCC--CCCCChhhHHHHHHHHhhcccccccccCC--C---CceeEecCChhHHHHHHHHHHcCcEEEEecCCeE
Q 006493          506 DSRLMDGNW--LKEPNVDTLLLFFRILAICHTAIPELNEE--T---GNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSV  578 (643)
Q Consensus       506 d~~l~~~~~--~~~~~~~~~~~~~~~lalch~~~~~~~~~--~---~~~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~  578 (643)
                      |+.+.+...  .+....+.+.+|+.++|+||++.++..++  +   +.+.|+++||||.||+++|+++|+.+.+|+++++
T Consensus       513 ~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i  592 (1178)
T PLN03190        513 DPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHI  592 (1178)
T ss_pred             CHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeE
Confidence            111111110  01122345678999999999998853211  1   2467999999999999999999999999999999


Q ss_pred             EEEecCCCCCCcceeEEEEEEeecCCCCCceEEEEEEcCCCeEEEEEeccchhhhhhhhccC
Q 006493          579 FIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQILLLCKGADRLASPLLFNFL  640 (643)
Q Consensus       579 ~~~~~~~~~g~~~~~~~~il~~~~F~S~rKrMSViv~~~~g~~~l~~KGA~e~Il~~c~~~~  640 (643)
                      .+...+      .+..|++++++||+|+||||||||+++++++++|||||||+|+++|++..
T Consensus       593 ~i~~~~------~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~  648 (1178)
T PLN03190        593 VIDIHG------ERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL  648 (1178)
T ss_pred             EEeecc------ceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc
Confidence            887654      26789999999999999999999999889999999999999999998653

>KOG0206 consensus P-type ATPase [General function prediction only]	Back alignment and domain information

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase	Back alignment and domain information

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type	Back alignment and domain information

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit	Back alignment and domain information

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase	Back alignment and domain information

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase	Back alignment and domain information

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)	Back alignment and domain information

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase	Back alignment and domain information

>PRK10517 magnesium-transporting ATPase MgtA; Provisional	Back alignment and domain information

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase	Back alignment and domain information

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase	Back alignment and domain information

>PRK15122 magnesium-transporting ATPase; Provisional	Back alignment and domain information

>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK01122 potassium-transporting ATPase subunit B; Provisional	Back alignment and domain information

>TIGR01497 kdpB K+-transporting ATPase, B subunit	Back alignment and domain information

>PRK14010 potassium-transporting ATPase subunit B; Provisional	Back alignment and domain information

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC	Back alignment and domain information

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase	Back alignment and domain information

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase	Back alignment and domain information

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional	Back alignment and domain information

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase	Back alignment and domain information

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK10671 copA copper exporting ATPase; Provisional	Back alignment and domain information

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit	Back alignment and domain information

>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus	Back alignment and domain information

>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)	Back alignment and domain information

>KOG4383 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		643
3ar4_A		995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	9e-17
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2zxe_A		1028	Na, K-ATPase alpha subunit; membrane protein, ION	5e-08
2zxe_A		1028	Na, K-ATPase alpha subunit; membrane protein, ION	3e-05
3ixz_A		1034	Potassium-transporting ATPase alpha; ION pump, H+,	8e-08
3ixz_A		1034	Potassium-transporting ATPase alpha; ION pump, H+,	3e-05
3gwi_A		170	Magnesium-transporting ATPase, P-type 1; P-type AT	1e-07
3b8c_A		885	ATPase 2, plasma membrane-type; P-type ATPase, pro	3e-07
3b8c_A		885	ATPase 2, plasma membrane-type; P-type ATPase, pro	1e-04
1mhs_A		920	Proton pump, plasma membrane ATPase; ION transport	5e-06
1mhs_A		920	Proton pump, plasma membrane ATPase; ION transport	4e-05

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995	Back alignment and structure

 Score = 83.5 bits (207), Expect = 9e-17
 Identities = 47/224 (20%), Positives = 70/224 (31%), Gaps = 51/224 (22%)

Query: 410 EELGQVDTILSDKTGTLTCNQMDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRES 469
           E LG    I SDKTGTLT NQM     SV                  +M I  +      
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM-----SV-----------------CKMFIIDKVDGDFC 378

Query: 470 ANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLMDGNWLKEPNVDTLLLFFRI 529
           +  +   +GS                      +  E   L +   ++    D L+    I
Sbjct: 379 SLNEFSITGS---------------------TYAPEGEVLKNDKPIRSGQFDGLVELATI 417

Query: 530 LAICHTAIPELNEETGNLTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKGQ 589
            A+C+ +  + NE  G      E   E A      +     +     ++   ER      
Sbjct: 418 CALCNDSSLDFNETKGVYEKVGE-ATETALTTLVEKMNV--FNTEVRNLSKVERANACNS 474

Query: 590 PVEREFKILNLLDFTSKRKRMSVIVRDEDGQI-----LLLCKGA 628
            + +  K    L+F+  RK MSV               +  KGA
Sbjct: 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 518

PyMOL of 3ar4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028	Back alignment and structure

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028	Back alignment and structure

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034	Back alignment and structure

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034	Back alignment and structure

>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170	Back alignment and structure

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885	Back alignment and structure

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885	Back alignment and structure

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920	Back alignment and structure

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		643
2zxe_A		1028	Na, K-ATPase alpha subunit; membrane protein, ION	100.0
3ixz_A		1034	Potassium-transporting ATPase alpha; ION pump, H+,	100.0
3ar4_A		995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	100.0
1mhs_A		920	Proton pump, plasma membrane ATPase; ION transport	100.0
3b8c_A		885	ATPase 2, plasma membrane-type; P-type ATPase, pro	100.0
3rfu_A		736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	100.0
3j08_A		645	COPA, copper-exporting P-type ATPase A; copper tra	100.0
3j09_A		723	COPA, copper-exporting P-type ATPase A; copper tra	100.0
2hc8_A		113	PACS, cation-transporting ATPase, P-type; copper,	99.85
2kij_A		124	Copper-transporting ATPase 1; actuator, menkes dis	99.8
3gwi_A		170	Magnesium-transporting ATPase, P-type 1; P-type AT	99.3
2yj3_A		263	Copper-transporting ATPase; hydrolase, P-type ATPa	97.69
3a1c_A		287	Probable copper-exporting P-type ATPase A; ATP-bin	97.64
3skx_A		280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	96.75
4fe3_A		297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	90.06

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A	Back alignment and structure

Probab=100.00  E-value=1.5e-63  Score=593.27  Aligned_cols=436  Identities=19%  Similarity=0.176  Sum_probs=340.0

Q ss_pred             ccccCCCCCCCceeecccccchhhhHHHHHHHHHHHHHHHHHHHHHHhhccC--C----C---CCchhhhHHHHHHHHHH
Q 006493           46 MHKKRPLKYCTNYISTTKYNFFSYFPKALFEQFNRVANIYFLIAALLSVTPL--S----P---FSPVSMLLPLAIVVGVS  116 (643)
Q Consensus        46 ~~~~~~~~yg~N~i~~~k~~~~~flp~~l~~~f~~~~~~~~l~~~il~~~~~--~----~---~~~~~~~~~l~~vl~i~  116 (643)
                      +.++|+++||+|+++.++...++   +.+++||+++++++++++++++++.+  .    .   ...+...++++++++++
T Consensus        72 e~~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~  148 (1028)
T 2zxe_A           72 RAKEILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT  148 (1028)
T ss_dssp             HHHHHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence            45678999999999988654432   78999999999999999999987641  1    0   01233445667788899


Q ss_pred             HHHHHHHHHHHhhhhhhh---cceEEEEEeCCCeEEEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCC
Q 006493          117 MAKEALEDWRRFMQDKEV---NARKVSVHVGNGVFSYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNL  193 (643)
Q Consensus       117 ~i~~~~~~~~~~k~~~~~---n~~~~~V~~r~g~~~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~L  193 (643)
                      ++.+++++++++++.+.+   .+.+++|+ |||++++|++++|+|||||.|++||.|||||+|+++++    |.||||+|
T Consensus       149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~-Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~L  223 (1028)
T 2zxe_A          149 GCFSYYQEAKSSRIMDSFKNMVPQQALVI-RDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSL  223 (1028)
T ss_dssp             HHHHHHHTCCCCCHHHHHHTTSCSEEEEE-ETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCeeEEE-ECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCcc
Confidence            999999998887776554   45789999 89999999999999999999999999999999999765    89999999


Q ss_pred             CCccceeeecccccCCCCCchhhhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEE
Q 006493          194 DGETNLKVKRAMEATSPLNEDEAFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIF  273 (643)
Q Consensus       194 tGEs~p~~K~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~  273 (643)
                      ||||.|+.|.+++..                                     ..+++..|++++||.+.+ |++.|+|++
T Consensus       224 TGES~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~  265 (1028)
T 2zxe_A          224 TGESEPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVY  265 (1028)
T ss_dssp             HSCCSCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEE
T ss_pred             CCCCcceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEE
Confidence            999999999876432                                     013344556666666553 459999999


Q ss_pred             eccccceec---ccCCCCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeccCCCCccccCCCCCccccCCCCCch
Q 006493          274 TGHDSKVMQ---NATTSPSKRSGIEKKMDKIIFILFAILVLISLISSIGFAVKINYQTPQWWYLKPKETDVYFNPGKPLV  350 (643)
Q Consensus       274 tG~~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  350 (643)
                      ||.+|++++   +....+.+++++++.+++++.+++++.++++++.++++++..     ..|+                 
T Consensus       266 tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~~-----------------  323 (1028)
T 2zxe_A          266 TGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG-----YSWL-----------------  323 (1028)
T ss_dssp             CGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCHH-----------------
T ss_pred             eccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CcHH-----------------
Confidence            999997655   445667789999999999999999988888888777644321     1233                 


Q ss_pred             hHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhcccccccccCCCCceeccCcchhhcccccEEEEcCCCccccCc
Q 006493          351 PGLAHLVTALILYGYLIPISLYVSIEIVKFLQAIFINQDISMYDDESGIPAQARTSNLNEELGQVDTILSDKTGTLTCNQ  430 (643)
Q Consensus       351 ~~~~~~~~~i~ll~~~iP~~L~v~l~~~~~~~~~~i~~d~~m~~~~~~~~i~vk~~~~~e~Lg~v~~i~~DKTGTLT~n~  430 (643)
                         ..+..++.+++.+||++||++++++..+++.+|          ++++++||+++++|+||++++||||||||||+|+
T Consensus       324 ---~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~  390 (1028)
T 2zxe_A          324 ---EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR  390 (1028)
T ss_dssp             ---HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSS
T ss_pred             ---HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCe
Confidence               355667778888999999999999999999998          7899999999999999999999999999999999


Q ss_pred             eEEEEEEEcCeecCCCCchHHHHHHHHhhhhhhhhhhhhhccccCCCCccchhhhhcccCCCCccccccCCCCcCcchhc
Q 006493          431 MDFLKCSVAGTAYGVSPSEVELAAAKQMAIDLEEQNRESANAKHKNSGSEIELETVITSNDGNDFKRRIKGFNFEDSRLM  510 (643)
Q Consensus       431 m~v~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  510 (643)
                      |+|.++++++..|.....+.                                           .     .+..       
T Consensus       391 m~v~~~~~~~~~~~~~~~~~-------------------------------------------~-----~~~~-------  415 (1028)
T 2zxe_A          391 MTVAHMWFDNQIHEADTTEN-------------------------------------------Q-----SGAA-------  415 (1028)
T ss_dssp             CEEEEEEETTEEEECCCCTT-------------------------------------------C-----CSCC-------
T ss_pred             EEEEEEEECCeeeeccCCCC-------------------------------------------c-----cccc-------
Confidence            99999999887664321110                                           0     0000       


Q ss_pred             ccCCCCCCChhhHHHHHHHHhhcccccccccCCCCc--eeEecCChhHHHHHHHHHHcCcEEEEecCCeEEEEecCCCCC
Q 006493          511 DGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGN--LTYEAESPDEAAFLVAAREFGFEFYRRTQSSVFIRERYPPKG  588 (643)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~lalch~~~~~~~~~~~~--~~y~~gsp~E~All~~a~~~g~~~~~r~~~~~~~~~~~~~~g  588 (643)
                           .+......+.++.++++||++..+.......  ..+..|||+|.||+++|...|.....                
T Consensus       416 -----~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~----------------  474 (1028)
T 2zxe_A          416 -----FDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG----------------  474 (1028)
T ss_dssp             -----CCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH----------------
T ss_pred             -----cccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH----------------
Confidence                 0012234567889999999987653221100  11236899999999999886432111                


Q ss_pred             CcceeEEEEEEeecCCCCCceEEEEEEcC---CCeEEEEEeccchhhhhhhhccC
Q 006493          589 QPVEREFKILNLLDFTSKRKRMSVIVRDE---DGQILLLCKGADRLASPLLFNFL  640 (643)
Q Consensus       589 ~~~~~~~~il~~~~F~S~rKrMSViv~~~---~g~~~l~~KGA~e~Il~~c~~~~  640 (643)
                        .+..|++++++||+|+|||||++++.+   +|++++|+|||||.|+++|+++.
T Consensus       475 --~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~  527 (1028)
T 2zxe_A          475 --MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL  527 (1028)
T ss_dssp             --HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC
T ss_pred             --HHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh
Confidence              135688999999999999999999974   57889999999999999998753

PyMOL of 2zxe

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A	Back alignment and structure

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...	Back alignment and structure

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1	Back alignment and structure

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}	Back alignment and structure

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}	Back alignment and structure

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}	Back alignment and structure

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}	Back alignment and structure

>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F	Back alignment and structure

>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}	Back alignment and structure

>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}	Back alignment and structure

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*	Back alignment and structure

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I	Back alignment and structure

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*	Back alignment and structure

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		643
d1wpga3		239	d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc	2e-18
d1q3ia_		214	d.220.1.1 (A:) Sodium/potassium-transporting ATPas	3e-08

>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Metal cation-transporting ATPase, ATP-binding domain N
superfamily: Metal cation-transporting ATPase, ATP-binding domain N
family: Metal cation-transporting ATPase, ATP-binding domain N
domain: Calcium ATPase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 82.6 bits (203), Expect = 2e-18
 Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 8/134 (5%)

Query: 501 GFNFEDSRLMDGNWLKEPNVDTLLLFFRILAICHTAIPELNEETGNLTYEAESPDEAAFL 560
            +  E   L +   ++    D L+    I A+C+ +  + NE  G          E A  
Sbjct: 28  TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86

Query: 561 VAAREFGFEFYRRTQSSVFIRERYPPKGQPVEREFKILNLLDFTSKRKRMSVIVRDEDGQ 620
               +           S    ER       + +  K    L+F+  RK MSV        
Sbjct: 87  TLVEKMNVFNTEVRNLSKV--ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144

Query: 621 -----ILLLCKGAD 629
                  +  KGA 
Sbjct: 145 RAAVGNKMFVKGAP 158

PyMOL of d1wpga3

>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		643
d1wpga1		115	Calcium ATPase, transduction domain A {Rabbit (Ory	99.84
d1q3ia_		214	Sodium/potassium-transporting ATPase alpha chain {	99.72
d1wpga3		239	Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta	99.71
d1wpga4		472	Calcium ATPase, transmembrane domain M {Rabbit (Or	99.48
d1qyia_		380	Hypothetical protein MW1667 (SA1546) {Staphylococc	96.28

>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.84  E-value=6.3e-22  Score=170.28  Aligned_cols=109  Identities=23%  Similarity=0.176  Sum_probs=83.3

Q ss_pred             EEEEEeCCCeE--EEeeeeccccCcEEEeccCcccCccEEEEeecCCCCeEEEEccCCCCccceeeecccccCCCCCchh
Q 006493          138 KVSVHVGNGVF--SYKPWEKIQVGDIVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRAMEATSPLNEDE  215 (643)
Q Consensus       138 ~~~V~~r~g~~--~~i~~~~LvvGDIV~l~~ge~iPaD~ill~~s~~~g~~~Vdes~LtGEs~p~~K~~~~~~~~~~~~~  215 (643)
                      .++|+ |+|++  ++|++++|+|||||.|++|+.|||||+||.+..  +.+.||||+||||+.|+.|.+.+.......  
T Consensus         2 ~~kV~-R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~~~~~--   76 (115)
T d1wpga1           2 MGKVY-RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPDPRAV--   76 (115)
T ss_dssp             EEEEE-BSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCCTTCC--
T ss_pred             ceEEE-ECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccccccc--
Confidence            57899 88875  789999999999999999999999999997653  448999999999999999987544311000  


Q ss_pred             hhcccceEEEeeCCCCCceEEEEEEEECCeeeccCCCCeEEeceeeecCCeEEEEEEEeccccceeccc
Q 006493          216 AFKEFTGTVKCENPNPSLYTFVGNIEYDRELYAIDPSQILLRDSKLRNTAHVYGSVIFTGHDSKVMQNA  284 (643)
Q Consensus       216 ~~~~~~~~i~~~~p~~~~~~f~Gt~~~~g~~~~l~~~ni~~rgs~l~~t~~~~gvVv~tG~~Tk~~~~~  284 (643)
                                  ..+..+.+|+||.+.+|+                     ++++|++||.+|.+++..
T Consensus        77 ------------~~~~~n~lf~GT~V~~G~---------------------~~~~V~~tG~~T~~G~i~  112 (115)
T d1wpga1          77 ------------NQDKKNMLFSGTNIAAGK---------------------ALGIVATTGVSTEIGKIR  112 (115)
T ss_dssp             ------------GGGCTTEECTTCEEEECE---------------------EEEEEEECGGGSHHHHHH
T ss_pred             ------------cccccceEEeccEEEeee---------------------EEEEEEEEccccHHHHHH
Confidence                        001122455555555555                     999999999999877643

PyMOL of d1wpga1

>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}	Back information, alignment and structure