Citrus Sinensis ID: 006502

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640---
MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEVRIWTLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW
ccccccccccccccccccccHHccccccccccHHHHHccccccHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHccccccEEEEEcccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHHHHHHcccccccccEEEEEccccHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHHccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEccccccccEEEcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHHHcccEEEEEcccccEEEEEcHHHccHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccEEEEEEcccccHHHccHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHccHHHHccEEEcccccHHHHcccccccccEHHHcccEcccHHHccccccccccccHHHHHHHHcccccHcHEEEEccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
msgpldrfarpcfegfsgsderrerksdfenseDERRTRIGSLKKKALNASTKFKhslkkkssrrksdgrvssvsiedvrdvEELQAVDAFRQSLimdellperhdDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVlsyyphgyhgvdkegrpvyierlgkvdsnklmqvTTMDRYIRYHVQGFEKAFavkfpactiaakrhidsstsildvQGVGLKNFSKNARELILRLQkidgdnypetLHQMFIINAGPGFRLLWNTVksfldpkttskiHVLGNKYQSKLLEIIDarelpeflggtcncadqggclrsdkgpwqnpeILKMVLNGGAPRARQIVKVLNSdgkviayakppmlkgsdtstaesgseaediaspkamksyshlrltpvrEEVRIWTLLCDYSYDFSIHFFKAKVvgktsyagsfsgydeyvpMVDKAvdsswkkqpslrspaakgslpqlptsktpegIRARIWAAVMAFFMMFVTLFRSVAYRvthripetstghdlnisevavdanekeefrppspspsltevDLLSSVTKRLSELEEKVDtlqakpsempyeKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW
msgpldrfarpcfegfsgsderrerksdfensederrtrigslkkkalnastkfkhslkkkssrrksdgrvssvsiedvrdveelqaVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHgyhgvdkegrPVYIERlgkvdsnklmqVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKViayakppmlkgsdtsTAESgseaediaspkamksyshlrltpvrEEVRIWTLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSlrspaakgslpqlptsktpeGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRipetstghdlnisEVAVDANEkeefrppspspsltevdLLSSVTKRLSELeekvdtlqakpsempyEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEakfrkkklcw
MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNAstkfkhslkkkssrrksdgrvssvsIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEVRIWTLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW
*********************************************************************************VEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYA********************************HLRLTPVREEVRIWTLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDK********************************IRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPET*****************************************************************ELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYID**************
******R***************************************************************************EELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDG****YA*************************************PVREEVRIWTLLCDYSYDFSIH**********************VPMVDKA***************************TPEGIRARIWAAVMAFFMMFVTLFRSVAYR******************************************LLSSVTKRLSELEEKVDTLQAKPS*MPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLA**D******FRKKKLCW
MSGPLDRFARPCFEGFS********************TRIGSLKKKALNAS************************IEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPML*****************ASPKAMKSYSHLRLTPVREEVRIWTLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDKA***************************TPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVD******************VDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEE**********
**********************************E**TRIGSLKKKALNASTKFKHSLKKK*****SDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKP*******************************************WTLLCDYSYDFSIHFFKAKVVG**SYAGSFSGYDEYVPMVDKAVDSSWK************SLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRI******************************PSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRK***C*
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MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEVRIWTLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTEVDLxxxxxxxxxxxxxxxxxxxxxPSEMPYEKEELLHAAVCRxxxxxxxxxxxxxxxxxxxxxQEDLLAYIDRQEEAKFRKKKLCW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query643 2.2.26 [Sep-21-2011]
Q10137286 Sec14 cytosolic factor OS yes no 0.362 0.814 0.434 5e-51
P45816492 SEC14 cytosolic factor OS yes no 0.437 0.571 0.366 2e-49
P46250301 SEC14 cytosolic factor OS N/A no 0.418 0.893 0.400 4e-49
P24859301 SEC14 cytosolic factor OS yes no 0.391 0.837 0.400 9e-49
P24280304 SEC14 cytosolic factor OS yes no 0.399 0.845 0.381 1e-46
P53989302 SEC14 cytosolic factor OS yes no 0.367 0.781 0.397 2e-46
Q75DK1308 SEC14 cytosolic factor OS yes no 0.387 0.808 0.389 6e-46
P33324310 CRAL-TRIO domain-containi no no 0.399 0.829 0.372 2e-42
Q92503715 SEC14-like protein 1 OS=H yes no 0.335 0.302 0.349 2e-31
Q7PWB1684 Protein real-time OS=Anop yes no 0.337 0.317 0.334 7e-31
>sp|Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=4 SV=1 Back     alignment and function desciption
 Score =  202 bits (515), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 147/237 (62%), Gaps = 4/237 (1%)

Query: 103 ERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPH 162
           ER DD   +LRFL+ARKF++ ++  M+ +  +WRKEFGVD ++++F + E   V  YYP 
Sbjct: 46  ERLDD-ATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYDEKEAVSKYYPQ 104

Query: 163 GYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRH 222
            YH  D +GRPVY+E+LG +D  KL Q+TT +R ++  V  +E     +FPAC+  A   
Sbjct: 105 FYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKRFPACSRKAGGL 164

Query: 223 IDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTV 282
           I++S +I+D++GVG+ +   +    I +   I  D YPE + + ++INA  GF   +N +
Sbjct: 165 IETSCTIMDLKGVGITSI-HSVYSYIRQASSISQDYYPERMGKFYVINAPWGFSSAFNLI 223

Query: 283 KSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQ 339
           K FLD  T  KIH+LG+ Y+S LLE I A  LP  LGG C C   GGC  SD GPW 
Sbjct: 224 KGFLDEATVKKIHILGSNYKSALLEQIPADNLPAKLGGNCQCP--GGCELSDAGPWH 278
Has a direct role in controlling cell septation and in forespore membrane formation.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 Back     alignment and function description
>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 Back     alignment and function description
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 Back     alignment and function description
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 Back     alignment and function description
>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 Back     alignment and function description
>sp|Q7PWB1|RETM_ANOGA Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query643
359474936625 PREDICTED: uncharacterized protein LOC10 0.967 0.995 0.806 0.0
255543761624 phosphatidylinositol transporter, putati 0.965 0.995 0.801 0.0
224080383636 predicted protein [Populus trichocarpa] 0.959 0.970 0.792 0.0
356538743629 PREDICTED: uncharacterized protein LOC10 0.967 0.988 0.787 0.0
224103379626 predicted protein [Populus trichocarpa] 0.967 0.993 0.792 0.0
357467367623 Sec14 cytosolic factor [Medicago truncat 0.964 0.995 0.786 0.0
14486705625 phosphatidylinositol transfer-like prote 0.967 0.995 0.783 0.0
357467365709 Sec14 cytosolic factor [Medicago truncat 0.959 0.870 0.785 0.0
356545143629 PREDICTED: uncharacterized protein LOC10 0.967 0.988 0.776 0.0
164564744631 CM0216.430.nc [Lotus japonicus] 0.959 0.977 0.784 0.0
>gi|359474936|ref|XP_002283681.2| PREDICTED: uncharacterized protein LOC100252199 [Vitis vinifera] gi|297744421|emb|CBI37683.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1072 bits (2773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/646 (80%), Positives = 571/646 (88%), Gaps = 24/646 (3%)

Query: 1   MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKK 60
           MSGPLDRFARPCFEGFSG DERRERKSDFENSEDERRTRIGSLKKKA+NASTKFKHSLKK
Sbjct: 1   MSGPLDRFARPCFEGFSGHDERRERKSDFENSEDERRTRIGSLKKKAINASTKFKHSLKK 60

Query: 61  KSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKF 120
           KSSRRKSDGRVSSVSIEDVRDVEEL+AVDAFRQ+LI+DELLP +HDDYHMMLRFLKARKF
Sbjct: 61  KSSRRKSDGRVSSVSIEDVRDVEELEAVDAFRQALILDELLPTKHDDYHMMLRFLKARKF 120

Query: 121 DIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLG 180
           DI+KAKHMW +M+QWRK+FG DTI+EDFEFKE+NEVL YYPHG+HGVDKEGRPVYIERLG
Sbjct: 121 DIEKAKHMWTDMIQWRKDFGADTILEDFEFKELNEVLKYYPHGHHGVDKEGRPVYIERLG 180

Query: 181 KVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNF 240
           KVD  KLMQVTTMDRY++YHVQ FEK+FA+KFPACTIAAKRHIDSST+ILDVQGVG KN 
Sbjct: 181 KVDPYKLMQVTTMDRYVKYHVQEFEKSFALKFPACTIAAKRHIDSSTTILDVQGVGFKNL 240

Query: 241 SKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNK 300
           +K AR+LI+RLQKIDGDNYPETL QMFIINAGPGFRLLWNTVK+FLDPKTTSKIHVLGNK
Sbjct: 241 TKAARDLIMRLQKIDGDNYPETLCQMFIINAGPGFRLLWNTVKTFLDPKTTSKIHVLGNK 300

Query: 301 YQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVK 360
           YQ+KLLEIIDA ELPEFLGGTC CADQGGCLRSDKGPW NP+ILKM+ NG A RARQ+VK
Sbjct: 301 YQNKLLEIIDASELPEFLGGTCTCADQGGCLRSDKGPWNNPDILKMMHNGDARRARQVVK 360

Query: 361 VLNSDGKVIAYAKP--PMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEVRIW 418
           VLNS+GKVIAYAKP  PM+KGSDTSTAESGSEAEDIASPK  KSYS LRLTPVREE    
Sbjct: 361 VLNSEGKVIAYAKPQYPMMKGSDTSTAESGSEAEDIASPKMTKSYSQLRLTPVREE---- 416

Query: 419 TLLCDYSYDFSIHFFKAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSP-AAK 477
                           AKVVGK SYAGSF GYDEYVPMVDKAVD+ WKKQ +L+ P ++K
Sbjct: 417 ----------------AKVVGKVSYAGSFGGYDEYVPMVDKAVDAGWKKQAALQRPSSSK 460

Query: 478 GSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVA 537
           G+LP L T K+PEGI  RI +A++AFFM   TLF +VA RVT+++P+    HD NI ++A
Sbjct: 461 GTLPLLDTQKSPEGIHTRILSALLAFFMTLFTLFCTVALRVTNKLPD-RVDHDENIPQLA 519

Query: 538 VDANEKEEFRPPSPSPSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAV 597
            DA  KE+FRPPSP P+ TE DLLSSV K+LSELEEKVDTLQAKPSEMPYEKEELL+AAV
Sbjct: 520 PDATHKEDFRPPSPIPAFTEADLLSSVLKKLSELEEKVDTLQAKPSEMPYEKEELLNAAV 579

Query: 598 CRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW 643
           CRVDALEAELIATKKALHEAL+RQE+LLAYID QEEAKFRKKK CW
Sbjct: 580 CRVDALEAELIATKKALHEALLRQEELLAYIDSQEEAKFRKKKFCW 625

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255543761|ref|XP_002512943.1| phosphatidylinositol transporter, putative [Ricinus communis] gi|223547954|gb|EEF49446.1| phosphatidylinositol transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224080383|ref|XP_002306120.1| predicted protein [Populus trichocarpa] gi|222849084|gb|EEE86631.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356538743|ref|XP_003537860.1| PREDICTED: uncharacterized protein LOC100785793 [Glycine max] Back     alignment and taxonomy information
>gi|224103379|ref|XP_002313032.1| predicted protein [Populus trichocarpa] gi|222849440|gb|EEE86987.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357467367|ref|XP_003603968.1| Sec14 cytosolic factor [Medicago truncatula] gi|355493016|gb|AES74219.1| Sec14 cytosolic factor [Medicago truncatula] Back     alignment and taxonomy information
>gi|14486705|gb|AAK63247.1|AF367433_1 phosphatidylinositol transfer-like protein III [Lotus japonicus] Back     alignment and taxonomy information
>gi|357467365|ref|XP_003603967.1| Sec14 cytosolic factor [Medicago truncatula] gi|355493015|gb|AES74218.1| Sec14 cytosolic factor [Medicago truncatula] Back     alignment and taxonomy information
>gi|356545143|ref|XP_003541004.1| PREDICTED: uncharacterized protein LOC100784405 [Glycine max] Back     alignment and taxonomy information
>gi|164564744|dbj|BAF98225.1| CM0216.430.nc [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query643
TAIR|locus:2050019637 AT2G21520 [Arabidopsis thalian 0.648 0.654 0.770 1.4e-240
TAIR|locus:2136288614 AT4G39170 [Arabidopsis thalian 0.900 0.942 0.637 4.2e-198
TAIR|locus:2018416668 AT1G75370 [Arabidopsis thalian 0.643 0.619 0.650 1.4e-183
TAIR|locus:2013134608 AT1G19650 [Arabidopsis thalian 0.629 0.666 0.643 1.4e-183
TAIR|locus:2115265543 SFH12 "AT4G36490" [Arabidopsis 0.479 0.567 0.741 1.1e-148
TAIR|locus:2053114558 AT2G18180 "AT2G18180" [Arabido 0.426 0.491 0.795 3.6e-148
TAIR|locus:2049319548 SFH3 "SEC14-like 3" [Arabidops 0.566 0.664 0.646 6.1e-144
TAIR|locus:2139564554 COW1 "CAN OF WORMS1" [Arabidop 0.503 0.584 0.672 2.1e-143
TAIR|locus:2136303554 SEC14 "SECRETION 14" [Arabidop 0.505 0.586 0.696 3.5e-137
TAIR|locus:2042634547 AT2G16380 [Arabidopsis thalian 0.510 0.599 0.637 2e-132
TAIR|locus:2050019 AT2G21520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1729 (613.7 bits), Expect = 1.4e-240, Sum P(2) = 1.4e-240
 Identities = 326/423 (77%), Positives = 368/423 (86%)

Query:     1 MSGPLDRFARPCF----EGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNAXXXXXX 56
             MSGPLDRFARP F    EGF  SDE++ERKSDFENSEDERRTRIGSLKKKA+NA      
Sbjct:     1 MSGPLDRFARPSFTTGFEGFLSSDEKKERKSDFENSEDERRTRIGSLKKKAINASTKFKH 60

Query:    57 XXXXXXXXXXXXXXXXXXXIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLK 116
                                IEDVRDVEELQAVDAFRQSL+MDELLP+RHDDYHMMLRFLK
Sbjct:    61 SLKKKSGRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLLMDELLPDRHDDYHMMLRFLK 120

Query:   117 ARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYI 176
             ARKFD++KAK MWA+M+QWRKEFG DTI++DF+F+EINEVL +YP  YHGVDKEGRP+YI
Sbjct:   121 ARKFDVEKAKQMWADMIQWRKEFGTDTIIQDFDFEEINEVLKHYPQCYHGVDKEGRPIYI 180

Query:   177 ERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVG 236
             ERLGKVD N+LMQVT+MDRY+RYHV+ FE++F +KFP+CTI+AKRHIDSST+ILDVQGVG
Sbjct:   181 ERLGKVDPNRLMQVTSMDRYVRYHVKEFERSFMIKFPSCTISAKRHIDSSTTILDVQGVG 240

Query:   237 LKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHV 296
             LKNF+K+AR+LI RLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKT++KIHV
Sbjct:   241 LKNFNKSARDLITRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTSAKIHV 300

Query:   297 LGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRAR 356
             LG KY SKLLE+ID  ELPEFLGG C CADQGGC+ SDKGPW+NPEI+KMVL+GGA RAR
Sbjct:   301 LGYKYLSKLLEVIDVNELPEFLGGACTCADQGGCMLSDKGPWKNPEIVKMVLHGGAHRAR 360

Query:   357 QIVKVLNSDGKVIAYAKPPM--LKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREE 414
             Q+VKVLNS+GKVIAYAKP    +KGSDTSTAESGS+AEDI SPKA+KS+SHLRLTPVREE
Sbjct:   361 QVVKVLNSEGKVIAYAKPSYTWIKGSDTSTAESGSDAEDIGSPKAIKSFSHLRLTPVREE 420

Query:   415 VRI 417
              +I
Sbjct:   421 AKI 423
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005622 "intracellular" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006810 "transport" evidence=IEA;ISS
TAIR|locus:2136288 AT4G39170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018416 AT1G75370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013134 AT1G19650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115265 SFH12 "AT4G36490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053114 AT2G18180 "AT2G18180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049319 SFH3 "SEC14-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139564 COW1 "CAN OF WORMS1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136303 SEC14 "SECRETION 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042634 AT2G16380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query643
smart00516158 smart00516, SEC14, Domain in homologues of a S 2e-40
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 6e-38
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 1e-35
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 3e-11
pfam13716149 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain 3e-09
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 6e-09
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information 
 Score =  144 bits (365), Expect = 2e-40
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 16/172 (9%)

Query: 152 EINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVK 211
           E+  + +Y P G  G DK+GRPV IER G+ D        T++  +RY V   EK    +
Sbjct: 1   ELELLKAYIPGGR-GYDKDGRPVLIERAGRFDLKS----VTLEELLRYLVYVLEKILQEE 55

Query: 212 FPACTIAAKRHIDSSTSILDVQGVGLKNF-SKNARELILRLQKIDGDNYPETLHQMFIIN 270
                      I+  T I D++G+ + N      R+++    KI  D+YPE L +++IIN
Sbjct: 56  KK------TGGIEGFTVIFDLKGLSMSNPDLSVLRKIL----KILQDHYPERLGKVYIIN 105

Query: 271 AGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTC 322
               FR+LW  +K FLD KT  KI  +GN  + +LLE ID  +LPE LGGT 
Sbjct: 106 PPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDKEQLPEELGGTL 157

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 643
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.96
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.95
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.91
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.33
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.61
KOG4406467 consensus CDC42 Rho GTPase-activating protein [Sig 97.93
>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=8.6e-45  Score=382.54  Aligned_cols=276  Identities=45%  Similarity=0.756  Sum_probs=247.1

Q ss_pred             CccccccccCCCC--HHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCcccc
Q 006502           69 GRVSSVSIEDVRD--VEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIME  146 (643)
Q Consensus        69 ~~v~s~~iedl~d--~eE~~aL~efRq~L~~~~~LP~~~dD~~~LLRFLRArkfDvekA~k~L~~~L~WRke~g~d~i~~  146 (643)
                      ..++.+..+++.+  +.+.+.++++| |+..+++++...+|+++||||||||+||+++|+++|.+++.||.+++.+.+..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~~~~~l~~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~   83 (317)
T KOG1471|consen    5 PMLAKVAKEELNEITESEEAVIAQLR-WLLQKPHLPNKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFE   83 (317)
T ss_pred             cccccccccccCCCcHHHHHHHHHHH-HHhhccCCCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhh
Confidence            3445555555554  55677788888 88899999975566579999999999999999999999999999999999987


Q ss_pred             ccchHHHHHHHhhcCcccccCCCCCCcEEEEeccccCcchhhhcchHhHHHHHHHHHHHHHHHhhChhhhhhhhCCCCcE
Q 006502          147 DFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSS  226 (643)
Q Consensus       147 d~~~~el~evlk~~p~~~~G~DkeGRPV~i~rlg~~d~~kl~~~~t~e~~ik~~v~~~E~~l~~~~pacsi~~~~~i~gi  226 (643)
                      +  .....++.+++|++++|+|++|+||++.+.|..|...++..+...++.++++..+|+.+..+++.|....+++++|+
T Consensus        84 ~--~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~  161 (317)
T KOG1471|consen   84 D--FEEDDELLKYYPQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGI  161 (317)
T ss_pred             c--cccchhhhhhccccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccee
Confidence            6  23334455688999999999999999999999999999999999999999999999999999999988878899999


Q ss_pred             EEEEeCCCCCCCCcchHHHHHHHHHHHHhccCCcccceeEEEEecChHHHHHHHHHHhcCChhhhcceEEcCCcchhHHH
Q 006502          227 TSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLL  306 (643)
Q Consensus       227 tiIIDl~Gvsl~~~~k~~~~lik~ilkilqd~YPErL~rI~IINaP~~f~~lWkiVKpFLdpkTr~KI~~lg~~~~e~L~  306 (643)
                      ++|+|++|+++.|+....+.+++.++.++|+||||+++++||||+|++|+.+|++|||||+++|++||++++.++.+.|.
T Consensus       162 ~~I~Dl~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~  241 (317)
T KOG1471|consen  162 VTIFDLKGVSLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSKDKESLL  241 (317)
T ss_pred             EEEEECCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecCCCchhhhh
Confidence            99999999999999989999999999999999999999999999999999999999999999999999977777889999


Q ss_pred             hhcCCCCCccccCCccccC---CCCCCccCCCCCCCCHHHHHHH
Q 006502          307 EIIDARELPEFLGGTCNCA---DQGGCLRSDKGPWQNPEILKMV  347 (643)
Q Consensus       307 e~Id~s~LP~eyGGt~~~~---~~ggcl~~~~gpW~dp~i~k~v  347 (643)
                      ++|++++||++|||+|.+.   ..++|...+.++|.++.+.+..
T Consensus       242 k~i~~~~LP~~yGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (317)
T KOG1471|consen  242 KYIPPEVLPEEYGGTCGDLDDPNGGGCDLSDEGPWKEPEIKKGK  285 (317)
T ss_pred             hhCCHhhCccccCCCccccccccCCcCccccccccccccccccc
Confidence            9999999999999999996   3567999999999887766644

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query643
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 2e-47
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 2e-43
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 8e-43
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 8e-22
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 9e-22
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 1e-20
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 3e-09
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 7e-09
3hy5_A316 Crystal Structure Of Cralbp Length = 316 3e-05
3hx3_A316 Crystal Structure Of Cralbp Mutant R234w Length = 3 1e-04
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (475), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 150/251 (59%), Gaps = 3/251 (1%)
Query: 95  LIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEIN 154
           L+ D    ER DD   +LRFL+ARKFD+  AK M+    +WRK++G DTI++DF + E  
Sbjct: 40  LLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKP 98
Query: 155 EVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPA 214
            +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R ++  V  +E     + PA
Sbjct: 99  LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPA 158
Query: 215 CTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPG 274
           C+ AA   +++S +I+D++G+ + + + +    +     I  + YPE + + +IINA  G
Sbjct: 159 CSRAAGHLVETSCTIMDLKGISISS-AYSVMSYVREASYISQNYYPERMGKFYIINAPFG 217
Query: 275 FRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCAD-QGGCLRS 333
           F   +   K FLDP T SKI +LG+ YQ +LL+ I A  LP   GG     + +GG   S
Sbjct: 218 FSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKGGLYLS 277
Query: 334 DKGPWQNPEIL 344
           D GPW++P+ +
Sbjct: 278 DIGPWRDPKYI 288
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure
>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316 Back     alignment and structure
>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query643
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 1e-121
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 1e-117
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 9e-96
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 8e-95
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 8e-75
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 9e-04
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
 Score =  362 bits (930), Expect = e-121
 Identities = 102/275 (37%), Positives = 159/275 (57%), Gaps = 6/275 (2%)

Query: 81  DVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFG 140
           D  + +A+   R+ L+ D    ER DD   +LRFL+ARKFD+  AK M+    +WRK++G
Sbjct: 27  DSAQEKALAELRK-LLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYG 84

Query: 141 VDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYH 200
            DTI++DF + E   +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R ++  
Sbjct: 85  TDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL 144

Query: 201 VQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYP 260
           V  +E     + PAC+ AA   +++S +I+D++G+ + +   +    +     I  + YP
Sbjct: 145 VWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSA-YSVMSYVREASYISQNYYP 203

Query: 261 ETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGG 320
           E + + +IINA  GF   +   K FLDP T SKI +LG+ YQ +LL+ I A  LP   GG
Sbjct: 204 ERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGG 263

Query: 321 TCNCAD-QGGCLRSDKGPWQNPEILKMVLNGGAPR 354
                + +GG   SD GPW++P+ +     G AP 
Sbjct: 264 KSEVDESKGGLYLSDIGPWRDPKYIGP--EGEAPE 296
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Length = 256 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 643
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 4e-65
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 5e-53
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 1e-32
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 2e-22
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 3e-19
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 6e-12
d1uk5a_111 a.7.7.1 (A:) BAG-family molecular chaperone regula 4e-06
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  211 bits (537), Expect = 4e-65
 Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 4/206 (1%)

Query: 150 FKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFA 209
           + E   +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R ++  V  +E    
Sbjct: 1   YDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQ 60

Query: 210 VKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFII 269
            + PAC+ AA   +++S +I+D++G+ + +   +    +     I  + YPE + + +II
Sbjct: 61  YRLPACSRAAGHLVETSCTIMDLKGISISSA-YSVMSYVREASYISQNYYPERMGKFYII 119

Query: 270 NAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCAD-QG 328
           NA  GF   +   K FLDP T SKI +LG+ YQ +LL+ I A  LP   GG     + +G
Sbjct: 120 NAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKG 179

Query: 329 GCLRSDKGPWQNPEILKMVLNGGAPR 354
           G   SD GPW++P+ +     G AP 
Sbjct: 180 GLYLSDIGPWRDPKYIGP--EGEAPE 203
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query643
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 100.0
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.98
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.43
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.36
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 98.98
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-42  Score=289.48  Aligned_cols=191  Identities=36%  Similarity=0.681  Sum_probs=177.7

Q ss_pred             HHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECC
Q ss_conf             99983057655457999992899944656931011101076899999999999987117142663207878679999688
Q 006502          154 NEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQ  233 (643)
Q Consensus       154 ~ev~k~~p~~~~G~DkeGRPVliirlgk~d~~kl~~~~tie~~ik~~v~~lE~~l~~~~pacsi~~~~~iegitiIIDl~  233 (643)
                      ..+.++||+++||+|++||||+|+++|++|+.++.+..+.+++++++++.+|.+++..++.++...+..++++++|+|++
T Consensus         5 ~~~~~~~p~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~   84 (203)
T d1auaa2           5 PLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLK   84 (203)
T ss_dssp             HHHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECT
T ss_pred             HHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf             89999788857779989998999978777968954469999999999999999999888876651167632189999899


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHCCEEECCCCCHHHHHHHCCCCC
Q ss_conf             99977753479999999999961478654216899935857999999997118910011268828750468981028899
Q 006502          234 GVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARE  313 (643)
Q Consensus       234 Gvsl~~l~k~~~~lik~i~kilqd~YPErL~rI~IINaP~~f~~lWkiVKpFLdpkTr~KI~ilg~~~~~~L~e~Id~d~  313 (643)
                      |++++++.. ...+++.+++++|++||++++++||||+|++|+++|+++++||+++|++||+++++++.+.|.++||+++
T Consensus        85 g~s~~~~~~-~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~  163 (203)
T d1auaa2          85 GISISSAYS-VMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAEN  163 (203)
T ss_dssp             TCCHHHHHH-HHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSS
T ss_pred             CCCHHHHHH-HHHHHHHHHHHHHHHCHHHHCCEEEECCCHHHHHHHHHHHHHCCHHHHHCEEECCCCCHHHHHHHCCHHH
T ss_conf             997677664-9999999999888758696532689788588999999878643988761065247787899985689856


Q ss_pred             CCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHH
Q ss_conf             7522699656678-8997568999899878999
Q 006502          314 LPEFLGGTCNCAD-QGGCLRSDKGPWQNPEILK  345 (643)
Q Consensus       314 LP~elGGt~~~~~-~ggcl~~~~gpW~dp~i~k  345 (643)
                      ||.+|||+|+|++ .|+|..++.|||+||+++.
T Consensus       164 LP~~~GG~~~~~~~~g~~~~~~~~~~~~p~~~~  196 (203)
T d1auaa2         164 LPVKFGGKSEVDESKGGLYLSDIGPWRDPKYIG  196 (203)
T ss_dssp             SBGGGTSCBCCCGGGCCSTTCCCSGGGCGGGCC
T ss_pred             CHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf             909869978678778983246788888812217
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure