Citrus Sinensis ID: 006506

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640---

MKGGGGGGGGGAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYDKYENSETFNHAENYRSTRINDLVKKLAPNISKDVRSNFPDGAKTETSDMSATDTSHHSKVTPVSPPAVPQSLPNTSNSKIAGTVADSGRGGVDENENCELKFGSYCLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGIEKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVHP

ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccccccccccEEEEEEEcccccEEEEEEEEEcccccccccEEEEEEEcccHHHHHHHHHHHccccEEEEEEccccHHHccccHHHHHHHcccccEEEEEEccccccccccccccccHHHHHHccccHHcccccEEEEEEccEEEccccHHHHcccccccEEEEEEEcccccHHHHHccccccccccccccccccEEEEHHHHHHHcHHHHHHHHHHHHccccccccccccccccccccccEEEccccHHccccccccccccccccccEEEEccccccccccccccccHHHHHHHHccccHHHHHccccc

cccccccccccEEEccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccHcccccEEccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHccccccHHccccccEEEEEEcccEHHEEEEEHHHHHcccccccEEEEEEEccccHHHHHHHHHHccccccEEEEEEHcHcccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHccEEEEEcccEEEEEccHHHHcEcccccEcccHHcccccHHHHHHHHccccccccHHHHHccccEEcHHHHHHHcHHHHHHHHHHHHcccccEEEcccccccEEEEcccccccccccEEEcccccccccHHHHHccEEEEEccccccHHHHccHcccHHHHHHcccccHHHHHccccc

mkgggggggggAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLglhngfhspnpnpngyvpvhktsivsdlkiydkyensetfnhaeNYRSTRINDLVKKlapniskdvrsnfpdgaktetsdmsatdtshhskvtpvsppavpqslpntsnskiagtvadsgrggvdenencelkfgsyCLWRREHREEMKDTMVKKLKDQLFVARAYypsiaklpsqDKLTRALRQNIQEVERVLsesatdvdlppgiEKKIQRMEAAITKAksvpvdcsnvdKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMelsqadrfsdpslhhyVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLlsvdgpsihskMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWdinmggkvngAVQSCSVSLGQLksylgensydknscawmsglnivDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWalsglghdygLNIEAIKKAAVLHYNgnmkpwlelgIPRYKKFWKKFLNQEDQLLSECNVHP

mkggggggggGAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYDKYENsetfnhaenyrsTRINDLVKKlapniskdvrsnfpdgaktetSDMSATDTSHHSKVTPVSPPAVPQSLPNTSNSKIAGTVADsgrggvdenencelkfgsycLWRREHREEMKDTMVKKLKDQLFVARAYYpsiaklpsqdkLTRALRQNIQEVervlsesatdvdlppgiEKKIQRMEAAITkaksvpvdcsnvDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDqllsecnvhp

MKgggggggggAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYDKYENSETFNHAENYRSTRINDLVKKLAPNISKDVRSNFPDGAKTETSDMSATDTSHHSKVTPVSPPAVPQSLPNTSNSKIAGTVADSGRGGVDENENCELKFGSYCLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGIEKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTkvvvldddvvvqkdlSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVHP

*************LVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYDKYENSETFNHAENYRSTRINDLV*************************************************************************NCELKFGSYCLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKL********************************************ITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQ*********

**********************RSLVIGVLFLVILSMLVPLAFLLGLHNGFHS*NPN******************************************************************************************************************************************TMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQ**********************IQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEY*******************SLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVH*

**********GAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYDKYENSETFNHAENYRSTRINDLVKKLAPNISKDVRSNFPDGAK**************************QSLPNTSNSKIAGTVADSGRGGVDENENCELKFGSYCLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGIEKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREV*********VALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVHP

********GGGAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPV********LKIYD***********************************************************************************************ENCELKFGSYCLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGIEKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVHP

iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		643	2.2.26 [Sep-21-2011]
Q9ZVI7		619	Probable galacturonosyltr	yes	no	0.934	0.970	0.594	0.0
Q93ZX7		616	Probable galacturonosyltr	no	no	0.793	0.827	0.375	4e-98
Q9LE59		673	Polygalacturonate 4-alpha	no	no	0.718	0.686	0.352	7e-95
Q0WQD2		680	Probable galacturonosyltr	no	no	0.715	0.676	0.380	3e-93
Q8RXE1		610	Probable galacturonosyltr	no	no	0.763	0.804	0.346	1e-81
Q9M9Y5		589	Probable galacturonosyltr	no	no	0.674	0.736	0.356	1e-79
Q949Q1		537	Probable galacturonosyltr	no	no	0.676	0.810	0.341	2e-69
Q9ZPZ1		528	Putative galacturonosyltr	no	no	0.681	0.829	0.328	6e-68
Q9LSG3		559	Galacturonosyltransferase	no	no	0.589	0.677	0.326	1e-60
Q9SKT6		536	Probable galacturonosyltr	no	no	0.685	0.822	0.324	4e-59

>sp\|Q9ZVI7\|GAUT7_ARATH Probable galacturonosyltransferase 7 OS=Arabidopsis thaliana GN=GAUT7 PE=1 SV=2	Back alignment and function desciption

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/629 (59%), Positives = 470/629 (74%), Gaps = 28/629 (4%)

Query: 19  KRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYDK 78
           KRRW+ LVIGVL LVILSMLVPLAFLLGLHNGFHSP     G+V V   S       ++ 
Sbjct: 15  KRRWKVLVIGVLVLVILSMLVPLAFLLGLHNGFHSP-----GFVTVQPASS------FES 63

Query: 79  YENSETFNHAENYRSTRINDLVKKLAPNISKDVRSNFPDGAKTETSDMSATD-TSHHSKV 137
           +       H +   S R++++++K+ P + K  +S+   G++    D++AT  T    + 
Sbjct: 64  FTRINATKHTQRDVSERVDEVLQKINPVLPK--KSDINVGSR----DVNATSGTDSKKRG 117

Query: 138 TPVSPPAVPQSLP-NTSNSKIAGTVADSGRGGVDEN-ENCELKFGSYCLWRREHREEMKD 195
            PVSP  V    P N + S+ + T         DE    CE+K+GSYCLWR E++E MKD
Sbjct: 118 LPVSPTVVANPSPANKTKSEASYTGVQRKIVSGDETWRTCEVKYGSYCLWREENKEPMKD 177

Query: 196 TMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGIEKK 255
             VK++KDQLFVARAYYPSIAK+PSQ KLTR ++QNIQE ER+LSES+ D DLPP ++KK
Sbjct: 178 AKVKQMKDQLFVARAYYPSIAKMPSQSKLTRDMKQNIQEFERILSESSQDADLPPQVDKK 237

Query: 256 IQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHC 315
           +Q+MEA I KAKS PVDC+NVDKK RQILD+T DEA+FHMKQS FLYQLAVQTMPKSLHC
Sbjct: 238 LQKMEAVIAKAKSFPVDCNNVDKKLRQILDLTEDEASFHMKQSVFLYQLAVQTMPKSLHC 297

Query: 316 LSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQ 375
           LSMRLTVE+FKS S  +E   +++FSDPSL H+VI S N+LASSVVINSTV+ AR+SKN 
Sbjct: 298 LSMRLTVEHFKSDS--LEDPISEKFSDPSLLHFVIISDNILASSVVINSTVVHARDSKNF 355

Query: 376 VFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSLL 435
           VFHVLTD QNYFAMK WF RN  K++TVQVLNIE+L L+  D    + + L  E+RVS  
Sbjct: 356 VFHVLTDEQNYFAMKQWFIRNPCKQSTVQVLNIEKLELDDSD----MKLSLSAEFRVSFP 411

Query: 436 SVD-GPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKV 494
           S D   S  ++  Y+S+FS  HYLLP++F  L KVV+LDDDVVVQ+DLS LWD++M GKV
Sbjct: 412 SGDLLASQQNRTHYLSLFSQSHYLLPKLFDKLEKVVILDDDVVVQRDLSPLWDLDMEGKV 471

Query: 495 NGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSM 554
           NGAV+SC+V LGQL+S L   ++D N+C WMSGLN+VDLARWR L +++TYQ+  +E+S 
Sbjct: 472 NGAVKSCTVRLGQLRS-LKRGNFDTNACLWMSGLNVVDLARWRALGVSETYQKYYKEMSS 530

Query: 555 GEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWL 614
           G+ES EA+AL+ SLLTFQD VYALD  WALSGLG+DY +N +AIK AA+LHYNGNMKPWL
Sbjct: 531 GDESSEAIALQASLLTFQDQVYALDDKWALSGLGYDYYINAQAIKNAAILHYNGNMKPWL 590

Query: 615 ELGIPRYKKFWKKFLNQEDQLLSECNVHP 643
           ELGIP YK +W++ L++ED+ LS+CNV+P
Sbjct: 591 ELGIPNYKNYWRRHLSREDRFLSDCNVNP 619

May be involved in pectin biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q93ZX7\|GAUT4_ARATH Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana GN=GAUT4 PE=2 SV=1	Back alignment and function description

>sp\|Q9LE59\|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1	Back alignment and function description

>sp\|Q0WQD2\|GAUT3_ARATH Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana GN=GAUT3 PE=2 SV=2	Back alignment and function description

>sp\|Q8RXE1\|GAUT5_ARATH Probable galacturonosyltransferase 5 OS=Arabidopsis thaliana GN=GAUT5 PE=2 SV=1	Back alignment and function description

>sp\|Q9M9Y5\|GAUT6_ARATH Probable galacturonosyltransferase 6 OS=Arabidopsis thaliana GN=GAUT6 PE=2 SV=1	Back alignment and function description

>sp\|Q949Q1\|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1	Back alignment and function description

>sp\|Q9ZPZ1\|GAUT2_ARATH Putative galacturonosyltransferase 2 OS=Arabidopsis thaliana GN=GAUT2 PE=5 SV=1	Back alignment and function description

>sp\|Q9LSG3\|GAUT8_ARATH Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1	Back alignment and function description

>sp\|Q9SKT6\|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		643
449511537		612	PREDICTED: probable galacturonosyltransf	0.917	0.964	0.595	0.0
449459576		612	PREDICTED: probable galacturonosyltransf	0.917	0.964	0.595	0.0
224140665		620	glycosyltransferase, CAZy family GT8 [Po	0.925	0.959	0.613	0.0
356532111		638	PREDICTED: probable galacturonosyltransf	0.950	0.957	0.589	0.0
239056181		541	transferase, transferring glycosyl group	0.738	0.878	0.699	0.0
296085804		568	unnamed protein product [Vitis vinifera]	0.853	0.966	0.575	0.0
356566836		617	PREDICTED: probable galacturonosyltransf	0.931	0.970	0.583	0.0
357506827		645	hypothetical protein MTR_7g074680 [Medic	0.970	0.967	0.569	0.0
297827451		617	GAUT7/LGT7 [Arabidopsis lyrata subsp. ly	0.933	0.972	0.601	0.0
18404824		619	alpha-1,4-galacturonosyltransferase [Ara	0.934	0.970	0.594	0.0

>gi\|449511537\|ref\|XP_004163983.1\| PREDICTED: probable galacturonosyltransferase 7-like [Cucumis sativus]	Back alignment and taxonomy information

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/631 (59%), Positives = 477/631 (75%), Gaps = 41/631 (6%)

Query: 18  GKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYD 77
            KRRWR LVIGVL LVILSMLVPL FLLGL+NGFH+      GY                
Sbjct: 18  AKRRWRGLVIGVLGLVILSMLVPLVFLLGLYNGFHTA-----GYA--------------- 57

Query: 78  KYENSETFNHAENYRSTRINDLVKKLAPNISKDVRSNFPDGAKTETSDMSATDTSHHSKV 137
               S+  N    ++ + ++D+++KL P + KDV   +    K ET D       H S+ 
Sbjct: 58  ----SDPQNSKPGFQPSHVDDVIRKLGPTLPKDVFQKYAIEPKKETVDFI-----HESQE 108

Query: 138 TPVSPPAVPQSLP---NTSNSKIAGTVADSGR-GGVDEN-ENCELKFGSYCLWRREHREE 192
               PP    +LP   + +++K+ G V  + R   VDE+ + CE KFGSYC+WR+EHRE 
Sbjct: 109 PKGLPPPKVDALPKHTHENSTKVGGRVQPTDRMTAVDESGKPCEWKFGSYCIWRQEHREV 168

Query: 193 MKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGI 252
           +KD+MVKKLKDQLFVARAYYP+IAKLP+Q +LT+ ++QNIQE+ERVLSES TD+DLP  I
Sbjct: 169 IKDSMVKKLKDQLFVARAYYPTIAKLPTQSQLTQEMKQNIQELERVLSESTTDLDLPLQI 228

Query: 253 EKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKS 312
           EKK  +MEA I KAKS PVDC+NVDKK RQI DMT DEANFHMKQSAFL+QLAVQTMPKS
Sbjct: 229 EKKSLKMEATIAKAKSFPVDCNNVDKKLRQIFDMTEDEANFHMKQSAFLFQLAVQTMPKS 288

Query: 313 LHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARES 372
           +HCLSM+LTVEYF+  S  +ELSQA+++SDP+L+HY+IFS N+LASSVVINSTV  ++ES
Sbjct: 289 MHCLSMQLTVEYFRIYSTKLELSQAEKYSDPTLNHYIIFSNNILASSVVINSTVSNSKES 348

Query: 373 KNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRV 432
           +NQVFHVLTDGQNYFAM LWF RN+++EA V+V+N+EQL L+ H+    +   LP E+R+
Sbjct: 349 RNQVFHVLTDGQNYFAMNLWFLRNSYEEAAVEVINVEQLKLDDHENVTFV---LPQEFRI 405

Query: 433 SLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGG 492
           S  ++     HS+ +YIS+FSHLHYLLPEIF++L KVVVL+DDV+VQ+DLSALW ++M G
Sbjct: 406 SFRTL----THSRTEYISMFSHLHYLLPEIFKNLDKVVVLEDDVIVQRDLSALWSLDMDG 461

Query: 493 KVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREV 552
           KVNGA Q C V LG+LKS LGEN Y +N C WMSGLN++DLA+WRELDL++T++ LVRE+
Sbjct: 462 KVNGAAQCCHVRLGELKSILGENGYVQNDCTWMSGLNVIDLAKWRELDLSQTFRSLVREL 521

Query: 553 SMGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKP 612
           +M   S +AVALR SLLTFQ L+YALD  W+L GLGHDY LN++ ++ AA LHYNG +KP
Sbjct: 522 TMQGGSTDAVALRASLLTFQSLIYALDDSWSLYGLGHDYKLNVQDVENAATLHYNGYLKP 581

Query: 613 WLELGIPRYKKFWKKFLNQEDQLLSECNVHP 643
           WLELGIP+YK +WKKFL++ED  LS+CN++P
Sbjct: 582 WLELGIPKYKAYWKKFLDREDLFLSKCNINP 612

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449459576\|ref\|XP_004147522.1\| PREDICTED: probable galacturonosyltransferase 7-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224140665\|ref\|XP_002323701.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi\|222868331\|gb\|EEF05462.1\| glycosyltransferase, CAZy family GT8 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356532111\|ref\|XP_003534617.1\| PREDICTED: probable galacturonosyltransferase 7-like [Glycine max]	Back alignment and taxonomy information

>gi\|239056181\|emb\|CAQ58617.1\| transferase, transferring glycosyl groups / unknown protein [Vitis vinifera]	Back alignment and taxonomy information

>gi\|296085804\|emb\|CBI31128.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356566836\|ref\|XP_003551632.1\| PREDICTED: probable galacturonosyltransferase 7-like [Glycine max]	Back alignment and taxonomy information

>gi\|357506827\|ref\|XP_003623702.1\| hypothetical protein MTR_7g074680 [Medicago truncatula] gi\|124360299\|gb\|ABN08312.1\| Glycosyl transferase, family 8 [Medicago truncatula] gi\|355498717\|gb\|AES79920.1\| hypothetical protein MTR_7g074680 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297827451\|ref\|XP_002881608.1\| GAUT7/LGT7 [Arabidopsis lyrata subsp. lyrata] gi\|297327447\|gb\|EFH57867.1\| GAUT7/LGT7 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|18404824|ref|NP_565893.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|334184793|ref|NP_001189702.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|75216987|sp|Q9ZVI7.2|GAUT7_ARATH RecName: Full=Probable galacturonosyltransferase 7; AltName: Full=Like glycosyl transferase 7 gi|15293097|gb|AAK93659.1| unknown protein [Arabidopsis thaliana] gi|20197396|gb|AAC67353.2| expressed protein [Arabidopsis thaliana] gi|20259303|gb|AAM14387.1| unknown protein [Arabidopsis thaliana] gi|330254468|gb|AEC09562.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|330254469|gb|AEC09563.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]

Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		643
TAIR\|locus:2064163		619	GAUT7 "AT2G38650" [Arabidopsis	0.936	0.972	0.574	1.6e-182
TAIR\|locus:2160957		616	GAUT4 "galacturonosyltransfera	0.793	0.827	0.352	1e-84
TAIR\|locus:2098836		673	GAUT1 "galacturonosyltransfera	0.856	0.818	0.300	2.5e-81
TAIR\|locus:2121753		680	GAUT3 "galacturonosyltransfera	0.713	0.675	0.363	2.6e-79
TAIR\|locus:504955915		610	LGT5 "los glycosyltransferase	0.912	0.962	0.312	9.3e-75
TAIR\|locus:2039934		528	GAUT2 "galacturonosyltransfera	0.682	0.831	0.302	1.6e-61
TAIR\|locus:2027453		537	GAUT11 "galacturonosyltransfer	0.681	0.815	0.311	4e-58
TAIR\|locus:2051426		536	GAUT10 "galacturonosyltransfer	0.698	0.837	0.291	2.3e-55
TAIR\|locus:2074572		561	GAUT9 "galacturonosyltransfera	0.636	0.729	0.303	2.1e-52
TAIR\|locus:2090210		559	QUA1 "QUASIMODO 1" [Arabidopsi	0.706	0.812	0.297	1.7e-50

TAIR\|locus:2064163 GAUT7 "AT2G38650" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1771 (628.5 bits), Expect = 1.6e-182, P = 1.6e-182
 Identities = 362/630 (57%), Positives = 456/630 (72%)

Query:    18 GKRRWRSLVIGVLFLVILSMLVPLAFLLGLHNGFHSPNPNPNGYVPVHKTSIVSDLKIYD 77
             GKRRW+ LVIGVL LVILSMLVPLAFLLGLHNGFHSP     G+V V   S       ++
Sbjct:    14 GKRRWKVLVIGVLVLVILSMLVPLAFLLGLHNGFHSP-----GFVTVQPASS------FE 62

Query:    78 KYENSETFNHAENYRSTRINDLVKKLAPNISKDVRSNFPDGAKTETSDMSATD-TSHHSK 136
              +       H +   S R++++++K+ P + K  +S+   G++    D++AT  T    +
Sbjct:    63 SFTRINATKHTQRDVSERVDEVLQKINPVLPK--KSDINVGSR----DVNATSGTDSKKR 116

Query:   137 VTPVSPPAVPQSLP-NTSNSKIAGTVADSGRGGVDEN-ENCELKFGSYCLWRREHREEMK 194
               PVSP  V    P N + S+ + T         DE    CE+K+GSYCLWR E++E MK
Sbjct:   117 GLPVSPTVVANPSPANKTKSEASYTGVQRKIVSGDETWRTCEVKYGSYCLWREENKEPMK 176

Query:   195 DTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPPGIEK 254
             D  VK++KDQLFVARAYYPSIAK+PSQ KLTR ++QNIQE ER+LSES+ D DLPP ++K
Sbjct:   177 DAKVKQMKDQLFVARAYYPSIAKMPSQSKLTRDMKQNIQEFERILSESSQDADLPPQVDK 236

Query:   255 KIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLH 314
             K+Q+MEA I KAKS PVDC+NVDKK RQILD+T DEA+FHMKQS FLYQLAVQTMPKSLH
Sbjct:   237 KLQKMEAVIAKAKSFPVDCNNVDKKLRQILDLTEDEASFHMKQSVFLYQLAVQTMPKSLH 296

Query:   315 CLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKN 374
             CLSMRLTVE+FKS S+   +S+  +FSDPSL H+VI S N+LASSVVINSTV+ AR+SKN
Sbjct:   297 CLSMRLTVEHFKSDSLEDPISE--KFSDPSLLHFVIISDNILASSVVINSTVVHARDSKN 354

Query:   375 QVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIHMFLPVEYRVSL 434
              VFHVLTD QNYFAMK WF RN  K++TVQVLNIE+L L+  D    + + L  E+RVS 
Sbjct:   355 FVFHVLTDEQNYFAMKQWFIRNPCKQSTVQVLNIEKLELDDSD----MKLSLSAEFRVSF 410

Query:   435 LSVDG-PSIHSKMQYISVFSHLHYLLPEIFQSLTXXXXXXXXXXXXXXXSALWDINMGGK 493
              S D   S  ++  Y+S+FS  HYLLP++F  L                S LWD++M GK
Sbjct:   411 PSGDLLASQQNRTHYLSLFSQSHYLLPKLFDKLEKVVILDDDVVVQRDLSPLWDLDMEGK 470

Query:   494 VNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVS 553
             VNGAV+SC+V LGQL+S L   ++D N+C WMSGLN+VDLARWR L +++TYQ+  +E+S
Sbjct:   471 VNGAVKSCTVRLGQLRS-LKRGNFDTNACLWMSGLNVVDLARWRALGVSETYQKYYKEMS 529

Query:   554 MGEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPW 613
              G+ES EA+AL+ SLLTFQD VYALD  WALSGLG+DY +N +AIK AA+LHYNGNMKPW
Sbjct:   530 SGDESSEAIALQASLLTFQDQVYALDDKWALSGLGYDYYINAQAIKNAAILHYNGNMKPW 589

Query:   614 LELGIPRYKKFWKKFLNQEDQLLSECNVHP 643
             LELGIP YK +W++ L++ED+ LS+CNV+P
Sbjct:   590 LELGIPNYKNYWRRHLSREDRFLSDCNVNP 619

GO:0016051 "carbohydrate biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS

GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR\|locus:2160957 GAUT4 "galacturonosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2098836 GAUT1 "galacturonosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504955915 LGT5 "los glycosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2027453 GAUT11 "galacturonosyltransferase 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZVI7	GAUT7_ARATH	2, ., 4, ., 1, ., -	0.5945	0.9346	0.9709	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		643
PLN02769		629	PLN02769, PLN02769, Probable galacturonosyltransfe	0.0
PLN02829		639	PLN02829, PLN02829, Probable galacturonosyltransfe	1e-126
PLN02910		657	PLN02910, PLN02910, polygalacturonate 4-alpha-gala	1e-117
PLN02718		603	PLN02718, PLN02718, Probable galacturonosyltransfe	1e-116
PLN02742		534	PLN02742, PLN02742, Probable galacturonosyltransfe	1e-100
cd06429		257	cd06429, GT8_like_1, GT8_like_1 represents a subfa	2e-95
PLN02523		559	PLN02523, PLN02523, galacturonosyltransferase	1e-78
PLN02870		533	PLN02870, PLN02870, Probable galacturonosyltransfe	5e-76
PLN02867		535	PLN02867, PLN02867, Probable galacturonosyltransfe	1e-66
PLN02659		534	PLN02659, PLN02659, Probable galacturonosyltransfe	9e-66
pfam01501		248	pfam01501, Glyco_transf_8, Glycosyl transferase fa	2e-35
cd00505		246	cd00505, Glyco_transf_8, Members of glycosyltransf	1e-16
cd04194		248	cd04194, GT8_A4GalT_like, A4GalT_like proteins cat	2e-14
COG1442		325	COG1442, RfaJ, Lipopolysaccharide biosynthesis pro	7e-12
cd06432		248	cd06432, GT8_HUGT1_C_like, The C-terminal domain o	8e-05

>gnl\|CDD\|215412 PLN02769, PLN02769, Probable galacturonosyltransferase	Back alignment and domain information

 Score =  973 bits (2517), Expect = 0.0
 Identities = 384/642 (59%), Positives = 459/642 (71%), Gaps = 19/642 (2%)

Query: 7   GGGGGAVLVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGL-HNGFHSP-NPNPNGYVPV 64
           GG GG  L   GKRRWR LVI VL LV+ SMLVPLAFLLGL HNGFHS            
Sbjct: 1   GGKGGHNLTPPGKRRWRGLVIAVLALVLCSMLVPLAFLLGLHHNGFHSTGRVAVQPVSSP 60

Query: 65  HKTSIVSDLKIYDKYENSETFNHAENYRSTRINDLVKKLAPNISKDVR--SNFPDGAKTE 122
             + + S  +   K   ++     +           K     IS   +    FPD     
Sbjct: 61  EFSHVGSARENGTKKTQNQVSEGVDEILKESGLTSSKPSDIVISSRSKLKKVFPDPKL-- 118

Query: 123 TSDMSATDTSHHSKVTPVSPPAVPQSLPNTSNSKIAGTVADSGRGGVDENENCELKFGSY 182
                     +   V P S P       N S +              +  ++CEL+FGSY
Sbjct: 119 ----------NPLPVKPHSVPVPSSDTKNKSTAIDKENKGQ-KADEDENEKSCELEFGSY 167

Query: 183 CLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSES 242
           CLW  EH+E MKD++VK+LKDQLFVARAYYPSIAKLP Q+KLTR L+QNIQE ERVLSES
Sbjct: 168 CLWSEEHKEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSES 227

Query: 243 ATDVDLPPGIEKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLY 302
            TD DLPP I+KK+++ME  I +AKS PVDC+NVD+K RQILDMT DEA+FHMKQSAFLY
Sbjct: 228 ITDADLPPFIQKKLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLY 287

Query: 303 QLAVQTMPKSLHCLSMRLTVEYFKSPSVVMELSQADRFSDPSLHHYVIFSTNVLASSVVI 362
           QL VQTMPKS HCLSMRLTVEYFKS S+ ME S +++FSDPSL HYVIFS NVLA+SVVI
Sbjct: 288 QLGVQTMPKSHHCLSMRLTVEYFKSSSLDMEDSNSEKFSDPSLRHYVIFSKNVLAASVVI 347

Query: 363 NSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILI 422
           NSTV+ +RES N VFHVLTD QNY+AMK WF RN++KEA VQVLNIE L L+  DK  L 
Sbjct: 348 NSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDLDKFALK 407

Query: 423 HMFLPVEYRVSLLSVDGPS-IHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKD 481
            + LP E+RVS  SVD PS    + +Y+SVFSH H+LLPEIF+ L KVVVLDDDVVVQ+D
Sbjct: 408 QLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRD 467

Query: 482 LSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDL 541
           LS LW+++MGGKVNGAVQ C V LGQLK+YLG+ ++D NSCAWMSGLN++DL +WRELD+
Sbjct: 468 LSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNVIDLDKWRELDV 527

Query: 542 TKTYQRLVREVSM-GEESKEAVALRGSLLTFQDLVYALDGVWALSGLGHDYGLNIEAIKK 600
           T+TY +L+++ S  GEES  A AL  SLLTFQDL+Y LD  W LSGLGHDYG++ +AIKK
Sbjct: 528 TETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGIDEQAIKK 587

Query: 601 AAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVH 642
           AAVLHYNGNMKPWLELGIP+YKK+WK+FLN++D+ + ECNV+
Sbjct: 588 AAVLHYNGNMKPWLELGIPKYKKYWKRFLNRDDRFMDECNVN 629

Length = 629

>gnl\|CDD\|215443 PLN02829, PLN02829, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178320 PLN02718, PLN02718, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215395 PLN02742, PLN02742, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>gnl\|CDD\|215286 PLN02523, PLN02523, galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215468 PLN02870, PLN02870, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|178458 PLN02867, PLN02867, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|215356 PLN02659, PLN02659, Probable galacturonosyltransferase	Back alignment and domain information

>gnl\|CDD\|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8	Back alignment and domain information

>gnl\|CDD\|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>gnl\|CDD\|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>gnl\|CDD\|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		643
PLN02769		629	Probable galacturonosyltransferase	100.0
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	100.0
PLN02829		639	Probable galacturonosyltransferase	100.0
PLN02742		534	Probable galacturonosyltransferase	100.0
PLN02718		603	Probable galacturonosyltransferase	100.0
PLN02523		559	galacturonosyltransferase	100.0
PLN02870		533	Probable galacturonosyltransferase	100.0
PLN02867		535	Probable galacturonosyltransferase	100.0
PLN02659		534	Probable galacturonosyltransferase	100.0
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	100.0
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	100.0
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	100.0
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	100.0
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	100.0
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	100.0
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	100.0
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	99.98
cd06432		248	GT8_HUGT1_C_like The C-terminal domain of HUGT1-li	99.97
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	99.93
PLN00176		333	galactinol synthase	99.9
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	99.71
KOG1879		1470	consensus UDP-glucose:glycoprotein glucosyltransfe	99.16
COG5597		368	Alpha-N-acetylglucosamine transferase [Cell envelo	97.39
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	95.07
PF11051		271	Mannosyl_trans3: Mannosyltransferase putative; Int	89.17
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	85.31

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

Probab=100.00  E-value=6.6e-158  Score=1302.95  Aligned_cols=617  Identities=62%  Similarity=0.990  Sum_probs=537.0

Q ss_pred             cccCccccchhhhHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCCCCCCCCCCCccccchhhhhhcc--cccCcccccccc
Q 006506           14 LVTTGKRRWRSLVIGVLFLVILSMLVPLAFLLGL-HNGFHSPNPNPNGYVPVHKTSIVSDLKIYDK--YENSETFNHAEN   90 (643)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   90 (643)
                      .+.++||||||+++|||+|||+||||||+||||| |+||||+     |.+.++..+   +.+ |++  ......+++.++
T Consensus         8 ~~~~~~~r~~~~~~~v~~lv~~s~l~pl~~l~~~~~~~~~~~-----~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~   78 (629)
T PLN02769          8 LTPPGKRRWRGLVIAVLALVLCSMLVPLAFLLGLHHNGFHST-----GRVAVQPVS---SPE-FSHVGSARENGTKKTQN   78 (629)
T ss_pred             CCCCCcccccchHHHHHHHHHHHHHHHHHHHhccccccCCcc-----ccccccccc---ccc-cccccccccCCCccccc
Confidence            4458999999999999999999999999999999 9999998     455444333   211 111  112244555555


Q ss_pred             ccchhhHHHHhhcCCCCccccccCCCCCCCcccCCCCccCcCCCCCcCCCCCCCCCCCCCCCCccccccccccCCCCCCC
Q 006506           91 YRSTRINDLVKKLAPNISKDVRSNFPDGAKTETSDMSATDTSHHSKVTPVSPPAVPQSLPNTSNSKIAGTVADSGRGGVD  170 (643)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (643)
                      ........+.+....+-.+....+.+.+......- +.. +.++.++.|.+.+. +.+...+.+.......+.+..+++|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e  155 (629)
T PLN02769         79 QVSEGVDEILKESGLTSSKPSDIVISSRSKLKKVF-PDP-KLNPLPVKPHSVPV-PSSDTKNKSTAIDKENKGQKADEDE  155 (629)
T ss_pred             cccccccccccccCcccCCCcccccCCcccCCccC-CCc-ccCCCCCCCCCCCC-ccccccccccccccccccccccccc
Confidence            55555555554444444433333333222211100 001 11222222222222 2222234444456666778889999


Q ss_pred             cccccceeccceeeeeccccccchhHHHHHhHHHHHHHHhhhhhhcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCCCc
Q 006506          171 ENENCELKFGSYCLWRREHREEMKDTMVKKLKDQLFVARAYYPSIAKLPSQDKLTRALRQNIQEVERVLSESATDVDLPP  250 (643)
Q Consensus       171 ~~~~~~~~~g~y~~w~~~~~~~~~d~~~~~~~dq~~~a~~y~~~~a~~~~~~~~~~el~~~~~e~~~~l~~~~~d~~l~~  250 (643)
                      ++|+|||+||||||||+||+++|+|++||+|||||||||||||+|||+++|++|+|||++||||+||+||||++|+|||+
T Consensus       156 ~~~~c~~~~g~y~~w~~e~~~~~~d~~~~~l~Dql~~Ak~y~~~iak~~~~~~l~~el~~~i~e~~~~l~~~~~d~dlp~  235 (629)
T PLN02769        156 NEKSCELEFGSYCLWSEEHKEVMKDSIVKRLKDQLFVARAYYPSIAKLPGQEKLTRELKQNIQEHERVLSESITDADLPP  235 (629)
T ss_pred             ccccceeeccceeeecccccccCcHHHHHHHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHhhccccccCCh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHhhhcCCccccccccccchhhhcCCcc
Q 006506          251 GIEKKIQRMEAAITKAKSVPVDCSNVDKKFRQILDMTNDEANFHMKQSAFLYQLAVQTMPKSLHCLSMRLTVEYFKSPSV  330 (643)
Q Consensus       251 ~~~~~~~~m~~~~~~ak~~~~~~~~~~~klr~~~~~~E~~~~~~~~q~~~l~~laa~~~Pk~lhcL~~rlt~ey~~~~~~  330 (643)
                      ++.++|++|+++|++||+++|||.+|++|||||+++||||+++|+||++||+||||+|+|||||||+||||+|||.+++.
T Consensus       236 ~~~~~~~~m~~~~~~ak~~~~dc~~~~~klr~~l~~~E~~~~~~~kq~~~l~~laa~t~PK~lHCL~mrLt~ey~~~~~~  315 (629)
T PLN02769        236 FIQKKLEKMEQTIARAKSCPVDCNNVDRKLRQILDMTEDEAHFHMKQSAFLYQLGVQTMPKSHHCLSMRLTVEYFKSSSL  315 (629)
T ss_pred             hHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccCCCCCCceEEEEEeCCchhhHHHHHHHHHhcCCCCCeEEEEEeCCCCHHHHHHHHHhccCCCceEEEEEccc
Q 006506          331 VMELSQADRFSDPSLHHYVIFSTNVLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQ  410 (643)
Q Consensus       331 ~~~~p~~~~l~D~~~iHIv~~sDNvLaasVvInSil~N~~~p~~i~FHIItD~in~~~mk~wF~~n~~~~a~I~vini~~  410 (643)
                      ++++|++++++||+++|||+||||+||++||||||+.|+++|++++||||||..|+.+|++||.++++++|+|+|+++++
T Consensus       316 ~~~~~~~~~l~d~~l~Hy~ifSdNvlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~  395 (629)
T PLN02769        316 DMEDSNSEKFSDPSLRHYVIFSKNVLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIED  395 (629)
T ss_pred             hccCCchhhccCCccceEEEEeccceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccchhHHHHhhccccchhhccccCCCCCccc-ccccchHhHHHHhhhhhhhccCCeEEEEecceeEeCCchHHHccc
Q 006506          411 LNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHS-KMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDIN  489 (643)
Q Consensus       411 f~~~~~~~~~l~~l~~~~efr~~f~~~~~p~~~~-r~~ylS~l~y~Rf~IPeLLP~ldKVLYLD~DvVV~~DLseLw~iD  489 (643)
                      |+|.+.++..+++++.+++|+++|++...|..++ +++|+|+++|+|||||++||+++||||||+||||++||++||++|
T Consensus       396 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iD  475 (629)
T PLN02769        396 LILKDLDKFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLD  475 (629)
T ss_pred             eeecccchHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCC
Confidence            9999999999999999999999988766554444 699999999999999999999999999999999999999999999


Q ss_pred             CCCCeeeeecccccchhhhhhhhccCCCCCCCCccccceEEechHHHHHhhHHHHHHHHHHHccC-Cccccccccccchh
Q 006506          490 MGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVSM-GEESKEAVALRGSL  568 (643)
Q Consensus       490 L~gkviaAVeDc~~~~~~~~~yl~~~~~~~~~cyfNSGVlLINL~kWRk~nitek~~~~l~~~~~-DQDlLN~GtLP~~n  568 (643)
                      |+|+++|||+||..+++.+.+|++..+|+++.||||+|||||||++||+++++++++.|++++.. |+..|..++||++|
T Consensus       476 L~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~ln  555 (629)
T PLN02769        476 MGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASL  555 (629)
T ss_pred             CCCCeEEEehhhhhhhhhhhhhhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHH
Confidence            99999999999988777778888888899999999999999999999999999999999988765 67889999999999


Q ss_pred             hhccCceEEeCCcccccCCCCCCCCCHhhhcCCeEEEccCCCCCcccCCccchHHHHHHHHhhCchhhccccCC
Q 006506          569 LTFQDLVYALDGVWALSGLGHDYGLNIEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQLLSECNVH  642 (643)
Q Consensus       569 l~F~g~i~~Ld~~WN~~~lg~d~~i~~~~i~~p~IIHY~G~~KPW~~~~~~~y~~lW~kY~~~s~~fl~~Cni~  642 (643)
                      ++|+|++++||.+||++++||++.+..+.+++|+||||+|++|||++.+.++|+++||+|++++++|||+|||+
T Consensus       556 lvF~g~v~~LD~rWNv~gLG~~~~i~~~~i~~paIIHYnG~~KPW~e~~i~~yr~~W~kYl~~~~~fl~~Cni~  629 (629)
T PLN02769        556 LTFQDLIYPLDDRWVLSGLGHDYGIDEQAIKKAAVLHYNGNMKPWLELGIPKYKKYWKRFLNRDDRFMDECNVN  629 (629)
T ss_pred             HHhcCeEEECCHHHccccccccccccccccCCcEEEEECCCCCCccCCCCChHHHHHHHHhccCChHHhhCCCC
Confidence            99999999999999999999998887788899999999999999999999999999999999999999999996

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02523 galacturonosyltransferase	Back alignment and domain information

>PLN02870 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02867 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02659 Probable galacturonosyltransferase	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose	Back alignment and domain information

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		643
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	4e-40
3tzt_A		276	Glycosyl transferase family 8; structural genomics	2e-21
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-17
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311	Back alignment and structure

 Score =  148 bits (375), Expect = 4e-40
 Identities = 49/302 (16%), Positives = 94/302 (31%), Gaps = 53/302 (17%)

Query: 349 VIFSTN---VLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQV 405
           ++F+ +        V   S V  A       FHVL  G +                 ++ 
Sbjct: 3   IVFAADDNYAAYLCVAAKS-VEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRF 61

Query: 406 LNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQS 465
           +++   +                                 +++IS+ ++    L E    
Sbjct: 62  IDVNPEDFAG--------------------------FPLNIRHISITTYARLKLGEYIAD 95

Query: 466 LTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSCAWM 525
             KV+ LD DV+V+  L+ LWD ++G    GA     V   + + Y  +         + 
Sbjct: 96  CDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVE--RQEGYKQKIGMADGEYYFN 153

Query: 526 SGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLL--TFQDLVYALDGVWA 583
           +G+ +++L +WR  D+ K     V      +           +L   F+  V   +  + 
Sbjct: 154 AGVLLINLKKWRRHDIFKMSSEWVE-----QYKDVMQYQDQDILNGLFKGGVCYANSRFN 208

Query: 584 LSGLGHDYGLN--------------IEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFL 629
                + +  N                 +   AV HY G  KPW         + + +  
Sbjct: 209 FMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELA 268

Query: 630 NQ 631
             
Sbjct: 269 GS 270

PyMOL of 1g9r

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		643
d1ga8a_		282	c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri	2e-26
d1ll2a_		263	c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun	8e-06

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  107 bits (267), Expect = 2e-26
 Identities = 51/310 (16%), Positives = 99/310 (31%), Gaps = 55/310 (17%)

Query: 349 VIFSTN---VLASSVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQV 405
           ++F+ +        V   S V  A       FHVL                         
Sbjct: 3   IVFAADDNYAAYLCVAAKS-VEAAHPDTEIRFHVLDA----------------------- 38

Query: 406 LNIEQLNLESHDKAILIHMFLPVEYRVSLLSVDGPSIHS---KMQYISVFSHLHYLLPEI 462
                  +   ++A +          +  + V+          +++IS+ ++    L E 
Sbjct: 39  ------GISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEY 92

Query: 463 FQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSVSLGQLKSYLGENSYDKNSC 522
                KV+ LD DV+V+  L+ LWD ++G    GA     V   + + Y  +        
Sbjct: 93  IADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVE--RQEGYKQKIGMADGEY 150

Query: 523 AWMSGLNIVDLARWRELDLTKTYQRLVREVSMGEESKEAVALRGSLLTFQDLVYALDGVW 582
            + +G+ +++L +WR  D+ K     V +     + ++   L      F+  V   +  +
Sbjct: 151 YFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDIL---NGLFKGGVCYANSRF 207

Query: 583 ALSGLGHDYGLN--------------IEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKF 628
                 + +  N                 +   AV HY G  KPW         + + + 
Sbjct: 208 NFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTEL 267

Query: 629 LNQEDQLLSE 638
                 +  E
Sbjct: 268 AGSLTTVPEE 277

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		643
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	100.0
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	99.94
d1fo8a_		343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	87.15

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=1.3e-43  Score=313.28  Aligned_cols=252  Identities=19%  Similarity=0.248  Sum_probs=198.0

Q ss_pred             EEEEE-EECCCHHH-HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf             18999-81996146-99999998730999971999994998988899999733688814999973442124541678875
Q 006506          346 HHYVI-FSTNVLAS-SVVINSTVLCARESKNQVFHVLTDGQNYFAMKLWFFRNTFKEATVQVLNIEQLNLESHDKAILIH  423 (643)
Q Consensus       346 iHIvi-~sDNvLaa-sVvInSii~Nsk~p~~ivFHIItD~is~~~mk~wF~~n~~~~a~I~Vi~ie~~~~~~~~~~~l~~  423 (643)
                      +|||+ +++|++.. +|+++|++.++++ .+++|||++++++.+..+.+...-...+..+.++.++...+..        
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~--------   71 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAG--------   71 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTT--------
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCC--------
T ss_conf             9899987887999999999999998869-9879999769999999999999998749869999779057515--------


Q ss_pred             HCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHCCCCCCCEEEEECCCCC
Q ss_conf             03541001102357999865545423386778865321302578299981456680791678711489971254213422
Q 006506          424 MFLPVEYRVSLLSVDGPSIHSKMQYISVFSHLHYLLPEIFQSLTKVVVLDDDVVVQKDLSALWDINMGGKVNGAVQSCSV  503 (643)
Q Consensus       424 l~~~~~fr~~f~~~~~p~~~~r~~ylS~lny~Rl~LPeLlP~ldKVLYLD~DVIVq~DLseLw~iDL~gkviaAVedc~~  503 (643)
                                     .+.   ..+++|.++|+||++|++||+++||||||+|+||.+||++||++|++++.+||+.++..
T Consensus        72 ---------------~~~---~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~  133 (282)
T d1ga8a_          72 ---------------FPL---NIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFV  133 (282)
T ss_dssp             ---------------SCC---CCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHH
T ss_pred             ---------------CCC---CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHCCCCCCEEEEEHHHHH
T ss_conf             ---------------632---24545799999998765487655589941888985360788724245660032113443


Q ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCHHHHCCCCEEEE
Q ss_conf             23455432125999999875324407760378878659999999999716-----9941101100100021026846880
Q 006506          504 SLGQLKSYLGENSYDKNSCAWMSGLNIVDLARWRELDLTKTYQRLVREVS-----MGEESKEAVALRGSLLTFQDLVYAL  578 (643)
Q Consensus       504 ~~~~~~~yl~~~~~~~~~cyfNSGVlLiDL~kWRk~nitek~~~~lq~~~-----~DQdllnlGsLP~~ll~F~g~i~~L  578 (643)
                      ..  ...+....++.+..+||||||||+|+++||+.++++++++++++..     .||+++|        .+|.|++..|
T Consensus       134 ~~--~~~~~~~~~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN--------~~f~~~~~~L  203 (282)
T d1ga8a_         134 ER--QEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILN--------GLFKGGVCYA  203 (282)
T ss_dssp             HT--STTHHHHTTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSTHHHHHH--------HHHTTSEEEE
T ss_pred             HH--HHHHHHHHCCCCCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH--------HHHCCCEEEC
T ss_conf             10--1326877078887751234303545044221327999999999643574267265787--------8744777767


Q ss_pred             CCCCCCCCCCCCCCC--------C------HHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf             784343577888988--------8------7541698699824899985349953029999999820801
Q 006506          579 DGVWALSGLGHDYGL--------N------IEAIKKAAVLHYNGNMKPWLELGIPRYKKFWKKFLNQEDQ  634 (643)
Q Consensus       579 d~~WN~~gLGyd~~i--------~------~e~ie~a~IIHY~G~~KPW~~~~~~~yr~lW~kYl~~s~~  634 (643)
                      |.+||++..++....        .      .+...+++||||+|+.|||...+.+.+++.|++|+.....
T Consensus       204 ~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~~~~~~~~~~~~~~  273 (282)
T d1ga8a_         204 NSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTT  273 (282)
T ss_dssp             CGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTTTHHHHHHHTTCSC
T ss_pred             CHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             8788026544454211012235115566554024798899208789899889887268999999976531

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure