Citrus Sinensis ID: 006525
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 642 | ||||||
| 449455513 | 642 | PREDICTED: transmembrane 9 superfamily m | 0.996 | 0.996 | 0.862 | 0.0 | |
| 255548734 | 645 | Endosomal P24A protein precursor, putati | 0.995 | 0.990 | 0.883 | 0.0 | |
| 224089368 | 642 | predicted protein [Populus trichocarpa] | 0.998 | 0.998 | 0.870 | 0.0 | |
| 357437169 | 637 | Transmembrane 9 superfamily protein memb | 0.985 | 0.993 | 0.878 | 0.0 | |
| 356564007 | 637 | PREDICTED: transmembrane 9 superfamily m | 0.982 | 0.990 | 0.886 | 0.0 | |
| 225430488 | 638 | PREDICTED: transmembrane 9 superfamily m | 0.976 | 0.982 | 0.878 | 0.0 | |
| 224141971 | 639 | predicted protein [Populus trichocarpa] | 0.992 | 0.996 | 0.871 | 0.0 | |
| 356552408 | 637 | PREDICTED: transmembrane 9 superfamily m | 0.964 | 0.971 | 0.898 | 0.0 | |
| 30683350 | 648 | endomembrane family protein 70 [Arabidop | 1.0 | 0.990 | 0.858 | 0.0 | |
| 356514937 | 637 | PREDICTED: transmembrane 9 superfamily m | 0.984 | 0.992 | 0.874 | 0.0 |
| >gi|449455513|ref|XP_004145497.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis sativus] gi|449485197|ref|XP_004157096.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/641 (86%), Positives = 601/641 (93%), Gaps = 1/641 (0%)
Query: 3 SRTRSTSATTAIVTFVVLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTSTKTQLPYS 62
+ TRS+S V ++L LIHG SFYLPGVAP+DF KGDEL VKVNKLTSTKTQLPYS
Sbjct: 2 ATTRSSSIRNFFVAAILLFLIHGVSSFYLPGVAPEDFEKGDELKVKVNKLTSTKTQLPYS 61
Query: 63 YYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFK 122
YYS+P+CRP+KI+DSAENLGEVLRGDRIENSPYVFKMREPQMC ++ R+ LDAK AK FK
Sbjct: 62 YYSLPFCRPEKILDSAENLGEVLRGDRIENSPYVFKMREPQMCGIVGRIKLDAKDAKEFK 121
Query: 123 EKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHVGLKGQYTGTKDEKYFIHNHLA 182
EKI+DEYRVNMILDNLPLVFPI+R DQESP VYQ+G+HVGLKGQYT +KDEKYFIHNHLA
Sbjct: 122 EKINDEYRVNMILDNLPLVFPIQRQDQESPVVYQMGYHVGLKGQYTASKDEKYFIHNHLA 181
Query: 183 FTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEK-TRLTTCDPHSKHTVVNSNTPQE 241
FTV+YH+D+QTD ARIVGFEVKPFSVKHEYEGNWN+K TRLTTCDPH+KHTVVNSN+PQE
Sbjct: 182 FTVRYHKDVQTDSARIVGFEVKPFSVKHEYEGNWNDKNTRLTTCDPHAKHTVVNSNSPQE 241
Query: 242 VAENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIM 301
V + +EI+FTYDVEFQES VKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIM
Sbjct: 242 VDDGREIVFTYDVEFQESGVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIM 301
Query: 302 LRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVT 361
LRTLYRDISKYNELET EEAQEETGWKLVHGDVFR P NSDLLCVYVGTGVQF GM++VT
Sbjct: 302 LRTLYRDISKYNELETLEEAQEETGWKLVHGDVFRAPKNSDLLCVYVGTGVQFLGMVVVT 361
Query: 362 MIFALLGFLSPSNRGGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFP 421
M+FA+LGFLSPSNRGGLMTAMLLLWVFMGLFAG+A+ARLYK+FKGTEWK++A +TA+ FP
Sbjct: 362 MMFAILGFLSPSNRGGLMTAMLLLWVFMGLFAGFAAARLYKMFKGTEWKKVALKTAVMFP 421
Query: 422 GIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPV 481
+ AIFFVLNALIWGQKSSGAVPFGTMFAL+ LWFGISVPLV+VGS+VGFKKPAIEDPV
Sbjct: 422 ATIFAIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFVGSYVGFKKPAIEDPV 481
Query: 482 KTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVF 541
KTNKIPRQIPEQAWYM+P FS+LIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVF
Sbjct: 482 KTNKIPRQIPEQAWYMHPAFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVF 541
Query: 542 VILIVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVS 601
+IL++TCAEITIVLCYFQLCSEDY WWWRSYLTSGSSALYLFLY+TFYFFTKLEITKLVS
Sbjct: 542 IILLITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYSTFYFFTKLEITKLVS 601
Query: 602 GILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID 642
G+LYFGYM I SYAFFVLTGTIGFYACFWFTRLIYSSVKID
Sbjct: 602 GVLYFGYMSIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID 642
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548734|ref|XP_002515423.1| Endosomal P24A protein precursor, putative [Ricinus communis] gi|223545367|gb|EEF46872.1| Endosomal P24A protein precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224089368|ref|XP_002308707.1| predicted protein [Populus trichocarpa] gi|118485813|gb|ABK94754.1| unknown [Populus trichocarpa] gi|222854683|gb|EEE92230.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357437169|ref|XP_003588860.1| Transmembrane 9 superfamily protein member [Medicago truncatula] gi|355477908|gb|AES59111.1| Transmembrane 9 superfamily protein member [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356564007|ref|XP_003550248.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|225430488|ref|XP_002285526.1| PREDICTED: transmembrane 9 superfamily member 4 isoform 1 [Vitis vinifera] gi|296082138|emb|CBI21143.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224141971|ref|XP_002324334.1| predicted protein [Populus trichocarpa] gi|222865768|gb|EEF02899.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356552408|ref|XP_003544560.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|30683350|ref|NP_196645.2| endomembrane family protein 70 [Arabidopsis thaliana] gi|332004219|gb|AED91602.1| endomembrane family protein 70 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|356514937|ref|XP_003526158.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 642 | ||||||
| TAIR|locus:2183710 | 648 | EMP1 "endomembrane protein 1" | 0.978 | 0.969 | 0.806 | 1e-281 | |
| TAIR|locus:2047565 | 637 | AT2G24170 [Arabidopsis thalian | 0.978 | 0.985 | 0.771 | 8.7e-269 | |
| TAIR|locus:2091561 | 641 | TMN7 "transmembrane nine 7" [A | 0.959 | 0.960 | 0.707 | 3.4e-244 | |
| TAIR|locus:2205682 | 637 | TMN6 "transmembrane nine 6" [A | 0.957 | 0.965 | 0.690 | 6.2e-236 | |
| UNIPROTKB|F1NVX7 | 642 | TM9SF4 "Uncharacterized protei | 0.956 | 0.956 | 0.475 | 1.8e-158 | |
| RGD|1307768 | 643 | Tm9sf4 "transmembrane 9 superf | 0.957 | 0.956 | 0.470 | 1.4e-156 | |
| MGI|MGI:2139220 | 643 | Tm9sf4 "transmembrane 9 superf | 0.957 | 0.956 | 0.468 | 3e-156 | |
| UNIPROTKB|Q92544 | 642 | TM9SF4 "Transmembrane 9 superf | 0.954 | 0.954 | 0.465 | 1e-155 | |
| UNIPROTKB|A5D7E2 | 642 | TM9SF4 "Transmembrane 9 superf | 0.961 | 0.961 | 0.467 | 1.3e-155 | |
| UNIPROTKB|F1PWE3 | 642 | TM9SF4 "Uncharacterized protei | 0.945 | 0.945 | 0.471 | 1.3e-155 |
| TAIR|locus:2183710 EMP1 "endomembrane protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2707 (958.0 bits), Expect = 1.0e-281, P = 1.0e-281
Identities = 507/629 (80%), Positives = 547/629 (86%)
Query: 15 VTFVVLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTSTKTQLPYSYYSIPYCRPKKI 74
+ + LL IHG+HSFYLPGVAPQDF KGDEL VKVNKLTS KTQLPYSYYS+P+CRP KI
Sbjct: 20 IALIFLLFIHGAHSFYLPGVAPQDFEKGDELKVKVNKLTSIKTQLPYSYYSLPFCRPSKI 79
Query: 75 VDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMI 134
VDS ENLGEVLRGDRIEN+PY FKMRE QMCN++ R+ LDAKTAKAFKEKIDDEYRVNMI
Sbjct: 80 VDSTENLGEVLRGDRIENAPYSFKMREAQMCNILGRVTLDAKTAKAFKEKIDDEYRVNMI 139
Query: 135 LDNLPLVFPIRRLDQESPTV-YQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQT 193
LDNLPLV PI R+DQ SP+V YQLG+HVGLKGQY G+K++K+F+HNHLAFTV+YHRDIQT
Sbjct: 140 LDNLPLVVPIERVDQGSPSVVYQLGYHVGLKGQYEGSKEQKFFMHNHLAFTVRYHRDIQT 199
Query: 194 DYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQEVAENKEIIFTYD 253
D ARIVGFEVKP+SVKHEYEG W+EKTRLTTCDPH+K VV+S TPQEV + KEIIFTYD
Sbjct: 200 DAARIVGFEVKPYSVKHEYEGEWSEKTRLTTCDPHTKRLVVSSATPQEVEQKKEIIFTYD 259
Query: 254 VEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYN 313
V+FQES+VKWASRWD YLLMSD+QIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIS+YN
Sbjct: 260 VDFQESEVKWASRWDTYLLMSDNQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISRYN 319
Query: 314 XXXXXXXXXXXXGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPS 373
GWKLVHGDVFR PTNSDLLCVYVGTGVQ GM+ VTMIFA+LGFLSPS
Sbjct: 320 ELETQEEAQEETGWKLVHGDVFRLPTNSDLLCVYVGTGVQCLGMVFVTMIFAMLGFLSPS 379
Query: 374 NRGGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFRTAITFPGIVSAIFFVLNA 433
NRGGLMTAMLLLWVFMGLFAGYAS+RLYK+FKGTEWKRIAFRTA FP +VSAIFFVLNA
Sbjct: 380 NRGGLMTAMLLLWVFMGLFAGYASSRLYKMFKGTEWKRIAFRTAFLFPAVVSAIFFVLNA 439
Query: 434 LIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPVKTNKIPRQIPEQ 493
LIWGQKSSGAVPFGTMFALI LWFGISVPLV+VG ++GFKKPA +DPVKTNKIPRQIPEQ
Sbjct: 440 LIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGGYIGFKKPAADDPVKTNKIPRQIPEQ 499
Query: 494 AWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQXXXXXXXXXXXXXXXXXTCAEITI 553
AWYMNP+FSILIGGILPFGAVFIELFFILTSIWLNQ TCAEIT+
Sbjct: 500 AWYMNPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCAEITV 559
Query: 554 VLCYFQLCSEDYQWWWRSYLTSGSSXXXXXXXXXXXXXXKLEITKLVSGILYFGYMLIAS 613
VLCYFQLCSEDY WWWRSYLTSGSS KL+ITKLVS +LYFGYMLIAS
Sbjct: 560 VLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLQITKLVSAMLYFGYMLIAS 619
Query: 614 YAFFVLTGTIGFYACFWFTRLIYSSVKID 642
YAFFVLTGTIGFYAC WFTRLIYSSVKID
Sbjct: 620 YAFFVLTGTIGFYACLWFTRLIYSSVKID 648
|
|
| TAIR|locus:2047565 AT2G24170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091561 TMN7 "transmembrane nine 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2205682 TMN6 "transmembrane nine 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NVX7 TM9SF4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|1307768 Tm9sf4 "transmembrane 9 superfamily protein member 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2139220 Tm9sf4 "transmembrane 9 superfamily protein member 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q92544 TM9SF4 "Transmembrane 9 superfamily member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A5D7E2 TM9SF4 "Transmembrane 9 superfamily member 4" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PWE3 TM9SF4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 642 | |||
| pfam02990 | 518 | pfam02990, EMP70, Endomembrane protein 70 | 0.0 |
| >gnl|CDD|217309 pfam02990, EMP70, Endomembrane protein 70 | Back alignment and domain information |
|---|
Score = 741 bits (1914), Expect = 0.0
Identities = 304/546 (55%), Positives = 396/546 (72%), Gaps = 32/546 (5%)
Query: 59 LPYSYYSIPYCRPKKIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTA 118
PY YYS+P+CRP+KI +E+LGEVL GDRI NSPY K E + C V+C + L ++
Sbjct: 1 EPYEYYSLPFCRPEKIKHKSESLGEVLFGDRIYNSPYKLKFLEEKECEVLCAVKLTSEDV 60
Query: 119 KAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHVGLKGQYTGTKDEKYFIH 178
K F++ I++ Y V ++DNLP+ + ++D ++ GF +G + +EKY++
Sbjct: 61 KFFRKAIEEGYYVQWLIDNLPVAGFVGKVD-NKGVGFESGFPLGFQ------TEEKYYLF 113
Query: 179 NHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNT 238
NHL F ++YH DY RIVG EV P SVK + C S
Sbjct: 114 NHLDFVIEYHDRDNDDY-RIVGIEVTPRSVKP------------SGCSTTSS-------- 152
Query: 239 PQEVAENKE--IIFTYDVEFQESDVKWASRWDAYLL-MSDDQIHWFSIVNSLMIVLFLSG 295
PQE+ E KE + FTY V+++ESDVKWASRWD YL M D QIHWFSI+NSL+IVLFLSG
Sbjct: 153 PQELDEGKENELTFTYSVKWKESDVKWASRWDKYLDAMHDLQIHWFSIINSLVIVLFLSG 212
Query: 296 MVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFF 355
+V+MI++RTL RDI++YNEL+ E+AQEE+GWKLVHGDVFRPP N LL VG+GVQ
Sbjct: 213 IVSMILMRTLRRDIARYNELDEDEDAQEESGWKLVHGDVFRPPRNPMLLSALVGSGVQLL 272
Query: 356 GMMLVTMIFALLGFLSPSNRGGLMTAMLLLWVFMGLFAGYASARLYKLFKGTEWKRIAFR 415
M++ T++FA LGFLSPSNRG L+TA ++L+ G AGY SARLYK FKG +WKR
Sbjct: 273 LMVIGTIVFACLGFLSPSNRGSLLTAAIVLYALTGFVAGYVSARLYKTFKGKKWKRNLIL 332
Query: 416 TAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKP 475
TA FPGIV IFFVLN ++W SSGA+PFGT+ AL++LWF +SVPL ++G VGF+
Sbjct: 333 TAFLFPGIVFVIFFVLNFVLWAYGSSGAIPFGTIVALLLLWFLVSVPLTFLGGIVGFRNR 392
Query: 476 AI-EDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQFYYIF 534
A + PV+TN+IPRQIPEQ WY++P+ IL+GGILPFGA+FIELFFI TS+WL++ YY+F
Sbjct: 393 AGEQHPVRTNQIPRQIPEQPWYLSPLPGILMGGILPFGAIFIELFFIFTSLWLHKIYYMF 452
Query: 535 GFLFLVFVILIVTCAEITIVLCYFQLCSEDYQWWWRSYLTSGSSALYLFLYATFYFFTKL 594
GFLFLVF+IL+V C+E+TIVL YFQLC+EDY+WWWRS+LTSGS+A+Y+FLY+ +YFFTKL
Sbjct: 453 GFLFLVFIILVVVCSEVTIVLTYFQLCAEDYRWWWRSFLTSGSTAVYVFLYSIYYFFTKL 512
Query: 595 EITKLV 600
+I+ V
Sbjct: 513 KISGFV 518
|
Length = 518 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 642 | |||
| KOG1278 | 628 | consensus Endosomal membrane proteins, EMP70 [Intr | 100.0 | |
| KOG1277 | 593 | consensus Endosomal membrane proteins, EMP70 [Intr | 100.0 | |
| PF02990 | 521 | EMP70: Endomembrane protein 70; InterPro: IPR00424 | 100.0 | |
| PF11368 | 248 | DUF3169: Protein of unknown function (DUF3169); In | 86.55 | |
| PF12670 | 116 | DUF3792: Protein of unknown function (DUF3792); In | 81.71 |
| >KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-204 Score=1616.50 Aligned_cols=627 Identities=66% Similarity=1.160 Sum_probs=590.3
Q ss_pred CCccccchhHHHHHHHHHHHHhhccceeecCCCCCCCCCCCCeEEEEEeccccCCCCcccccccCCCcCCCCCcCCCCCc
Q 006525 2 KSRTRSTSATTAIVTFVVLLLIHGSHSFYLPGVAPQDFVKGDELYVKVNKLTSTKTQLPYSYYSIPYCRPKKIVDSAENL 81 (642)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~pg~~p~~Y~~Gd~V~v~vNkl~s~~~~~~y~Yy~lpfC~p~~~~~~~~sl 81 (642)
..+.|+..+.. .++++.++.+.+.+||+||++|..|++||+|+++|||++|.++|.||+||++|||+|+++++++|||
T Consensus 2 ~~~~~~~~~~~--~~ll~~~~~~~~~~FylpG~aPv~f~~gd~i~l~vnklts~~t~lpY~YY~~~Fc~p~~i~~~~EnL 79 (628)
T KOG1278|consen 2 LRPKRSSRTLL--ALLLVSLLLSTSSAFYLPGVAPVNFCSGDPIELKVNKLTSSRTQLPYEYYSLPFCRPEKIKKQSENL 79 (628)
T ss_pred CcccchhhHHH--HHHHHHHHHhcccceecCCcCCccCCCCCceEEEEEEeeccccccCcccccccccCccccCCcccch
Confidence 34455544433 2233334445588999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceeeCCeEEEeccccccccceeeecCHHHHHHHHHHHHhcceEEEEEecceeccccccccCCCCeeeecCccc
Q 006525 82 GEVLRGDRIENSPYVFKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLDQESPTVYQLGFHV 161 (642)
Q Consensus 82 Ge~L~Gdr~~~S~y~i~f~~~~~c~~lC~~~~~~~~~~~l~~~I~~~Y~~~~~iD~LPv~~~~~~~~~~~~~~y~~Gfpl 161 (642)
||+|+|||++||||+++|++|++|+.+|+.++++++++.++|+|+++|++||++||||++.+.... ++++++|++|||+
T Consensus 80 GeVl~GDRi~nSPy~~~m~e~~~C~~lC~~k~~~~~~~~l~~~I~~~Y~v~wivDnlPva~~~~~~-~~~~~~y~~Gfpl 158 (628)
T KOG1278|consen 80 GEVLRGDRIENSPYKFKMLENQPCETLCATKLDKEDAKLLKKLIREGYVVNWIVDNLPVATRYERS-DDGKVYYGTGFPL 158 (628)
T ss_pred hceeccCcccCCCceEecccCCcchhhhcccCCHHHHHHHHHHHhhccEeeeeecCCceeEEEeec-CCCceEeccCccc
Confidence 999999999999999999999999999999999999999999999999999999999998766542 3478999999999
Q ss_pred cccccccCCCCCcEEEeeeEEEEEEEecCCCCCceEEEEEEEEeeeeeccccCCcccccccccCCCCCCccccCCCCccc
Q 006525 162 GLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDYARIVGFEVKPFSVKHEYEGNWNEKTRLTTCDPHSKHTVVNSNTPQE 241 (642)
Q Consensus 162 G~~~~~~~~~~~~~yL~NH~~f~I~yn~~~~~~~~~IVg~~v~p~S~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 241 (642)
|+.+ .++.+++|++||++|+|+||+.+ +++||||||||+|+|++|++++.++++ ....|+.+.++..+++
T Consensus 159 G~~~---~~~~~~~y~~NHl~~~i~yH~~~-~~~~riVgfeV~P~Si~~~~~~~~~~~-~~~~c~~~~~~~~~~e----- 228 (628)
T KOG1278|consen 159 GFKG---PKDEDKYYLHNHLDFVIRYHRDD-NDKYRIVGFEVKPVSIKHEHEKGDSKN-SLPTCSIPEKPLELDE----- 228 (628)
T ss_pred eecc---CCCccceeEeeeEEEEEEEEecC-CCceEEEEEEEEeeeeecccCCCcccc-cCCcccCCCCccccCC-----
Confidence 9984 22556789999999999999887 567999999999999999876654444 6678887766554443
Q ss_pred cCCCcEEEEEEEEEEeecccccchhhhhhccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcchhhhhhh
Q 006525 242 VAENKEIIFTYDVEFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEA 321 (642)
Q Consensus 242 ~~~~~~i~fTYSV~w~~s~~~w~~Rwd~yl~~~~~~ihw~SIiNS~~ivl~L~~~v~~Il~R~l~~D~~~yn~~~~~~~~ 321 (642)
.+++++.|||||+|+|+|++|++|||.|+++.+.|||||||+||++||+||+++|++|++||||||++|||++|.|||+
T Consensus 229 -~~~~~i~fTYsV~f~esdi~WasRWD~yL~m~~~qIhWfSIiNSlvIVlfLSgiv~mI~lRtl~rDiarYne~d~~~d~ 307 (628)
T KOG1278|consen 229 -GEETEIVFTYSVKFEESDIKWASRWDYYLHMEDVQIHWFSIINSLVIVLFLSGIVAMIMLRTLYRDIARYNELDLDDDA 307 (628)
T ss_pred -CCceEEEEEEEEEEEeccCcchhhHHHHhcCCCCceEEEehhhhHHHHHHHHHHHHHHHHHHHHHhHhhhccccchhhh
Confidence 3367799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCceEEeccccCCCCCccceeeeecchhHHHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHHHhhhhHHHHHHHH
Q 006525 322 QEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMMLVTMIFALLGFLSPSNRGGLMTAMLLLWVFMGLFAGYASARLY 401 (642)
Q Consensus 322 ~ee~GWKlvhgDVFR~P~~~~lls~lvG~G~Qll~~~~~~l~~a~~g~l~p~~rg~l~t~~i~~y~~~~~isGY~S~~~y 401 (642)
|||+|||+|||||||||+++|+||++||+|+|+++|+++++++|++|+++|++||+++|+++++|+++|++|||+|+|+|
T Consensus 308 ~Ee~GWKLVhGDVFR~P~~~~lLsv~vGsGvQ~l~M~~vti~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 308 QEESGWKLVHGDVFRPPRNSMLLSVLVGSGVQLLGMILVTIFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred hhhcceEEeecccccCCCCCeEEEEEeccChhhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccchhhhhhhccchhhHHHHHHHHHHHHHhhccCCCccChhHHHHHHHHHHHhhccchhhhhhhcccCCCCCCCc
Q 006525 402 KLFKGTEWKRIAFRTAITFPGIVSAIFFVLNALIWGQKSSGAVPFGTMFALIVLWFGISVPLVYVGSFVGFKKPAIEDPV 481 (642)
Q Consensus 402 k~~~g~~W~~~~~lt~~l~P~~~~~i~~~lN~i~~~~~Ss~aipf~ti~~l~~lw~~v~~PL~~iG~~~g~k~~~~~~P~ 481 (642)
|+++|++||+++++|++++||+++++++++|++.|+++||+|+||+|++++++||++||+||+++|+++|+|++++|+|+
T Consensus 388 k~~~g~~wk~~~~lta~l~PGivf~~~f~lN~~lW~~~SSgAvPF~T~~~ll~LwF~isVPLsf~G~y~g~kk~~~e~Pv 467 (628)
T KOG1278|consen 388 KTFKGREWKRNAILTAFLFPGIVFAIFFVLNFFLWGKHSSGAVPFSTMVALLFLWFGISVPLSFVGGYFGFKKPAIEHPV 467 (628)
T ss_pred hhhcCCcchhhHHhhhhhcchHHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhhHHHhhHHhhccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcccccchhhhcccccccchhhHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhHHhhhhhcccc
Q 006525 482 KTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCAEITIVLCYFQLC 561 (642)
Q Consensus 482 ~~n~ipR~IP~~~~y~~~~~~~l~~G~lPF~~i~iEl~~i~~S~W~~~~yy~fgfL~~~~iil~i~~a~vsI~~tY~~L~ 561 (642)
||||||||||+||||+++++.+++||++||++|||||+||++|+|.+|+||+||||+++++||+++|||+||++||+|||
T Consensus 468 rTNqIpRqIP~q~~y~~~~~~ili~GilPFg~ifIELfFI~~SiW~~qfYY~FGFLFlvfiiLvvtcaeisIvl~Yf~LC 547 (628)
T KOG1278|consen 468 RTNQIPRQIPEQPWYLNPIPSILIAGILPFGAIFIELFFILSSIWLNQFYYMFGFLFLVFIILVVTCAEISIVLTYFQLC 547 (628)
T ss_pred ccCCCcccCCCCccccchhhHHHhhcccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeeecccCchhHHHHHHHHhhheeeeeeccceeehhHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcccC
Q 006525 562 SEDYQWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKI 641 (642)
Q Consensus 562 ~Edy~WwWrSF~~~gs~~~y~f~Ysi~y~~~~~~~~g~~~~~~yf~ys~l~s~~~~l~~GtiGflas~~Fv~~IY~~iK~ 641 (642)
+||||||||||++||++|+|+|+||++|+++|++++|++++++|||||++++++++|+||||||+||+|||||||+++|+
T Consensus 548 ~Edy~WwWRsF~~sG~~avY~fiYsi~Y~~~kL~i~g~~s~~LYfgYsli~~~~~~l~tGtIGF~a~~~Fv~kIYssvKi 627 (628)
T KOG1278|consen 548 AEDYNWWWRSFLTSGSSAVYVFIYSIFYFFTKLEISGFVSAVLYFGYSLIISLLFFLLTGTIGFLAAFWFVRKIYSSVKI 627 (628)
T ss_pred hcccceeeeeeeccCcchhhHHHHHHhhhheeeeecccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhheec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 006525 642 D 642 (642)
Q Consensus 642 D 642 (642)
|
T Consensus 628 D 628 (628)
T KOG1278|consen 628 D 628 (628)
T ss_pred C
Confidence 8
|
|
| >KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter | Back alignment and domain information |
|---|
| >PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed | Back alignment and domain information |
|---|
| >PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 642 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 4e-05
Identities = 53/351 (15%), Positives = 94/351 (26%), Gaps = 85/351 (24%)
Query: 97 FKMREPQMCNVICRLILDAKTAKAFKEKIDDEYRVNMILDNLPLVFPIRRLD---QESPT 153
F+ E Q + IL F++ D + + D + +D
Sbjct: 9 FETGEHQYQ---YKDIL-----SVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 154 VYQLGFHVGLKGQYTGTKDEKYFIHNHLAFTVKYHRDIQTDY----ARIVGFEVKPFSVK 209
V + + F+ L + +Y + I + +P +
Sbjct: 61 VSGTLRLFWTLLSK-QEEMVQKFVEEVL----------RINYKFLMSPIKTEQRQPSMMT 109
Query: 210 HEYEGNWNEKTRL-TTCDPHSKHTVVNSNTPQEVAENKEIIFTYDVEFQ-ESDV------ 261
Y ++ RL +K+ V + Q + ++ + E + +V
Sbjct: 110 RMYI---EQRDRLYNDNQVFAKYNV---SRLQPYLKLRQALL----ELRPAKNVLIDGVL 159
Query: 262 ---KW-----ASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISK-- 311
K D +I W ++ N S + ML+ L I
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC------NSPETVLEMLQKLLYQIDPNW 213
Query: 312 -------YNELETQEEAQEETGWKLVHGDVFRPPTNSDLLC---VYVGTGVQFFGM---M 358
N Q E L +P N LL V F + +
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKS----KPYENC-LLVLLNVQNAKAWNAFNLSCKI 268
Query: 359 LVTMIFA-LLGFLSPSNRGGLMTAMLLLWVF-----MGLFAGYASARLYKL 403
L+T F + FLS + + + L Y R L
Sbjct: 269 LLTTRFKQVTDFLSAATTTHI-SLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00