Citrus Sinensis ID: 006560

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640
MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
ccccccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccEEEEEEEcccccccccccccEEEcccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEcccccEEEEEcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHccEEEEEEEccccHHHHHHHHHHHHHHHccccccccccccccEEEccccccEEEEEEcccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccEEEEEEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccccccccHHHHHHccccccccc
cccccccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHEccHHHHHHccHHHHHHHHHHcccccEEEEEEEccccccccccEccccccccEEccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEEcccccccccEEEEEEEEcccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHcccccHHHHHHHHHHHHHHccccccccHHccccEEEEcccccEEEEEEEEccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHcccHHHHHcHHHHccEEEEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccccEEEccHHHHHHccccccccc
MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEfrfaeeqpqdDYAAELAGNlliypaehvIYGEYMYEVWDEEMIKHLLgffmpenmridVVSKSfaksqdfhyepwfgsryteedispslmelwrnppeidvslqlpsqnefiptdfsirandisndlvtvtsptciidepliRFWYKLdntfklprantyfrinlkggydnvknCILTELFIHLLKDELNEIIYQASVAKLETsvsifsdklelkvygfndklPVLLSKILAIAKsflpsddrfKVIKEDVVRTlkntnmkplshssYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLchgnlsqeEAIHISNIFKSifsvqplpiemrHQECVIclpsganlvrnvsvknkcetNSVIELYFQIEQEKGMELTRLKALIDLFDEIleepffnqlrtkeqlgyvvecsprvtyrVFGFCFCiqsskynpiyLQERIDNFISGLDELleglddesfENYRSGLMAKLlekdpsltyesNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGcntnikesekhsksALVIKDLTAFKLSSEFYQSLC
MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAksflpsddrfkVIKEDVVRtlkntnmkplshssYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYlqqwspkcrRLAVRVWGCNTnikesekhsksalvIKDLTAFKLSSEFYQSLC
MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISgldelleglddeSFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
*****IAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFD**********SIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIK********ALVIKDLTAFKLS********
***SSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVR*******************VIKDLTAFKLSSEFYQ***
MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
****SIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNT*********KSALVIKDLTAFKLSSEFYQSLC
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MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query640 2.2.26 [Sep-21-2011]
Q24K021019 Insulin-degrading enzyme yes no 0.940 0.590 0.323 5e-92
P147351019 Insulin-degrading enzyme yes no 0.940 0.590 0.321 5e-92
P355591019 Insulin-degrading enzyme yes no 0.898 0.564 0.328 6e-91
Q9JHR71019 Insulin-degrading enzyme yes no 0.898 0.564 0.323 2e-89
O438471150 Nardilysin OS=Homo sapien no no 0.920 0.512 0.324 2e-85
Q5R4H61152 Nardilysin OS=Pongo abeli no no 0.920 0.511 0.326 6e-85
P472451161 Nardilysin OS=Rattus norv no no 0.920 0.507 0.322 1e-84
Q8BHG11161 Nardilysin OS=Mus musculu no no 0.920 0.507 0.321 1e-83
P22817990 Insulin-degrading enzyme yes no 0.953 0.616 0.301 2e-77
O22941970 Zinc-metallopeptidase, pe no no 0.964 0.636 0.291 4e-74
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1 Back     alignment and function desciption
 Score =  339 bits (869), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 209/646 (32%), Positives = 349/646 (54%), Gaps = 44/646 (6%)

Query: 10  FVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDD 69
           F++++ LT+ GL  + DII  ++QYI+ LR   PQ+W+F+E +D+  + FRF +++    
Sbjct: 373 FIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRG 432

Query: 70  YAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFH 129
           Y +++AG L  YP E V+  EY+ E +  ++I+ +L    PEN+R+ +VSKSF    D  
Sbjct: 433 YTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTD-R 491

Query: 130 YEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVT 189
            E W+G++Y +E I   +++ W+N  +++   +LP +NEFIPT+F I    +S +     
Sbjct: 492 TEEWYGTQYKQEAIPDEVIKKWQN-ADLNGKFKLPMKNEFIPTNFEI----LSLEKEATP 546

Query: 190 SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE 249
            P+ I D  + + W+K D+ F LP+A   F       Y +  +C +  L++ LLKD LNE
Sbjct: 547 YPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNE 606

Query: 250 IIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDV 309
             Y A +A L   +      + L V G+NDK P+LL KI+    +F   + RF++IKE  
Sbjct: 607 YAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAY 666

Query: 310 VRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIE 368
           +R+L N    +P  H+ Y    ++ +  +  DE    L  ++L  L AFIP+L S+L+IE
Sbjct: 667 MRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIE 726

Query: 369 GLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV------- 421
            L HGN++++ A+ I  + +           + H      LPS     R V +       
Sbjct: 727 ALLHGNITKQAALGIMQMVEDTL--------IEHAHTKPLLPSQLVRYREVQLPDRGWFV 778

Query: 422 ---KNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVE 478
              +N+   N  IE+Y+Q +    M+ T     ++LF +I+ EP FN LRTKEQLGY+V 
Sbjct: 779 YQQRNEVHNNCGIEIYYQTD----MQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVF 834

Query: 479 CSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKL 538
             PR    + G  F IQS K  P YL+ R++ F+  +++ +E + +E+F+ +   L  + 
Sbjct: 835 SGPRRANGIQGLRFIIQSEK-PPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRR 893

Query: 539 LEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRR 598
           L+K   L+ E  ++W +I  ++Y FD+   E   LK++ K D+I +YK  L   +P+  +
Sbjct: 894 LDKPKKLSAECAKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHK 953

Query: 599 LAVRV-------------WGCNTNIKESEKHS-KSALVIKDLTAFK 630
           ++V V             + C  +I  S+  +     VI+++T FK
Sbjct: 954 VSVHVLAREMDSCPVVGEFPCQNDINLSQAPALPQPEVIQNMTEFK 999
Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 5EC: 6
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4 Back     alignment and function description
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1 Back     alignment and function description
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2 Back     alignment and function description
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1 Back     alignment and function description
>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=1 SV=1 Back     alignment and function description
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1 SV=4 Back     alignment and function description
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query640
225434343 1045 PREDICTED: insulin-degrading enzyme-like 1.0 0.612 0.769 0.0
297745766 1062 unnamed protein product [Vitis vinifera] 1.0 0.602 0.769 0.0
224124732 1023 predicted protein [Populus trichocarpa] 1.0 0.625 0.757 0.0
356569463 1030 PREDICTED: insulin-degrading enzyme-like 1.0 0.621 0.737 0.0
449517405 1022 PREDICTED: LOW QUALITY PROTEIN: insulin- 1.0 0.626 0.716 0.0
449465779 1022 PREDICTED: insulin-degrading enzyme-like 1.0 0.626 0.716 0.0
110738483 1061 hypothetical protein [Arabidopsis thalia 0.996 0.601 0.690 0.0
297848966 1024 metalloendopeptidase [Arabidopsis lyrata 0.996 0.623 0.690 0.0
145335200 1024 putative N-arginine dibasic convertase [ 0.996 0.623 0.690 0.0
7523693 1039 Putative N-arginine dibasic convertase [ 0.993 0.612 0.687 0.0
>gi|225434343|ref|XP_002276484.1| PREDICTED: insulin-degrading enzyme-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1026 bits (2654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/641 (76%), Positives = 565/641 (88%), Gaps = 1/641 (0%)

Query: 1    MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFR 60
            M +SSIAYIF MSIHLTDSGLEKIF+IIGFVYQY KLLRQVSPQ+WIFKELQ+IGNMEFR
Sbjct: 405  MQQSSIAYIFSMSIHLTDSGLEKIFEIIGFVYQYFKLLRQVSPQEWIFKELQNIGNMEFR 464

Query: 61   FAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSK 120
            FAEEQPQDDYAAEL+ NL +YP EHVIYG+Y ++ WDEE IK+LL FF PENMRIDV+SK
Sbjct: 465  FAEEQPQDDYAAELSENLFVYPKEHVIYGDYAFKEWDEEKIKNLLCFFTPENMRIDVLSK 524

Query: 121  SFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAND 180
            SF +SQDF YEPWFGS+YTEEDISPSLM LWR+PPEIDVSL LP +NEFIP DFSI AN+
Sbjct: 525  SFPESQDFQYEPWFGSKYTEEDISPSLMALWRDPPEIDVSLHLPLKNEFIPCDFSIHANN 584

Query: 181  ISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFI 240
            + NDL   + P CI+D  L++ WYKLDNTFKLPRANTYFRI LK  YDNVKNC+LTELF+
Sbjct: 585  MHNDLANESLPRCILDTQLMKLWYKLDNTFKLPRANTYFRITLKEAYDNVKNCVLTELFM 644

Query: 241  HLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDD 300
            HLLKDELNEIIYQASVAKLETS+++FSDKLELKVYGFNDKLPVLLS+ILAIAKSFLP++D
Sbjct: 645  HLLKDELNEIIYQASVAKLETSIALFSDKLELKVYGFNDKLPVLLSRILAIAKSFLPTED 704

Query: 301  RFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPE 360
            RFKVIKED+ RTL+NTNMKPLSHSSYLRLQ+LCQSF+DVDEKL  L+ LSLADL AFIP+
Sbjct: 705  RFKVIKEDMERTLRNTNMKPLSHSSYLRLQILCQSFWDVDEKLCSLNDLSLADLKAFIPK 764

Query: 361  LRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVS 420
            + SQ++IEGLCHGN+ +EEA++ISNIF++ F VQPLP EM H+E VI LPSGANLVR+V 
Sbjct: 765  VLSQVHIEGLCHGNMLKEEALNISNIFENNFPVQPLPYEMMHKEHVINLPSGANLVRDVR 824

Query: 421  VKNKCETNSVIELYFQIEQEK-GMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVEC 479
            VKNK ETNSV+ELYFQIE E      T+LKAL+DLFDEI+EEP FNQLRTKEQLGYVVEC
Sbjct: 825  VKNKPETNSVVELYFQIEPECWAKSTTKLKALVDLFDEIVEEPLFNQLRTKEQLGYVVEC 884

Query: 480  SPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLL 539
             PR+TYRVFGFCFC+QSSKYNP+YLQERID FI+GL++LL GLD ESFE +R+GL+AKLL
Sbjct: 885  GPRITYRVFGFCFCVQSSKYNPVYLQERIDYFINGLEDLLAGLDVESFEQFRNGLLAKLL 944

Query: 540  EKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRL 599
            EKD SLTYE+NR W QI DKRYMFD S KEAE+L+SI K+D+I WY+TYL Q SP CRRL
Sbjct: 945  EKDTSLTYETNRIWGQIVDKRYMFDMSVKEAEELRSICKSDIIDWYRTYLLQSSPNCRRL 1004

Query: 600  AVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC 640
            AVRVWGCNT++KE+E  S+S  VI+DLT FK SS+FY S+C
Sbjct: 1005 AVRVWGCNTDLKEAEAQSQSVQVIEDLTVFKTSSKFYPSIC 1045

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297745766|emb|CBI15822.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224124732|ref|XP_002319408.1| predicted protein [Populus trichocarpa] gi|222857784|gb|EEE95331.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356569463|ref|XP_003552920.1| PREDICTED: insulin-degrading enzyme-like [Glycine max] Back     alignment and taxonomy information
>gi|449517405|ref|XP_004165736.1| PREDICTED: LOW QUALITY PROTEIN: insulin-degrading enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449465779|ref|XP_004150605.1| PREDICTED: insulin-degrading enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|110738483|dbj|BAF01167.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297848966|ref|XP_002892364.1| metalloendopeptidase [Arabidopsis lyrata subsp. lyrata] gi|297338206|gb|EFH68623.1| metalloendopeptidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|145335200|ref|NP_172173.2| putative N-arginine dibasic convertase [Arabidopsis thaliana] gi|332189930|gb|AEE28051.1| putative N-arginine dibasic convertase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7523693|gb|AAF63132.1|AC011001_2 Putative N-arginine dibasic convertase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query640
TAIR|locus:20330821024 AT1G06900 [Arabidopsis thalian 0.996 0.623 0.679 1.4e-243
UNIPROTKB|F1SC98990 IDE "Uncharacterized protein" 0.903 0.583 0.338 1.8e-87
UNIPROTKB|Q24K021019 IDE "Insulin-degrading enzyme" 0.903 0.567 0.338 2.9e-87
UNIPROTKB|P147351019 IDE "Insulin-degrading enzyme" 0.903 0.567 0.337 4.7e-87
RGD|28611019 Ide "insulin degrading enzyme" 0.903 0.567 0.335 4.3e-86
ZFIN|ZDB-GENE-070410-85998 ide "insulin-degrading enzyme" 0.903 0.579 0.335 5.4e-86
MGI|MGI:964121019 Ide "insulin degrading enzyme" 0.903 0.567 0.330 2.1e-84
UNIPROTKB|E2RGZ31019 IDE "Uncharacterized protein" 0.903 0.567 0.328 2.4e-83
UNIPROTKB|G3V1R51087 NRD1 "Nardilysin" [Homo sapien 0.951 0.560 0.316 1.4e-80
UNIPROTKB|O438471150 NRD1 "Nardilysin" [Homo sapien 0.951 0.529 0.316 2.2e-80
TAIR|locus:2033082 AT1G06900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2347 (831.2 bits), Expect = 1.4e-243, P = 1.4e-243
 Identities = 435/640 (67%), Positives = 532/640 (83%)

Query:     1 MHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFR 60
             ++RSS+AY+F MSIHLTDSGLEKI+DIIG++YQY+KLLR VSPQ+WIFKELQDIGNM+FR
Sbjct:   387 INRSSLAYVFGMSIHLTDSGLEKIYDIIGYIYQYLKLLRDVSPQEWIFKELQDIGNMDFR 446

Query:    61 FAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSK 120
             FAEEQP DDYAAEL+ N+L YP EHVIYG+Y+Y+ WD ++I+ L+GFF P+NMRIDVVSK
Sbjct:   447 FAEEQPADDYAAELSENMLAYPVEHVIYGDYVYQTWDPKLIEDLMGFFTPQNMRIDVVSK 506

Query:   121 SFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRAND 180
             S  KS++F  EPWFGS Y EED+  SLME W NP E+D SL LPS+N+FIP DFSIRA +
Sbjct:   507 SI-KSEEFQQEPWFGSSYIEEDVPLSLMESWSNPSEVDNSLHLPSKNQFIPCDFSIRAIN 565

Query:   181 ISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFI 240
                D  + + P CIIDEP ++FWYKLD TFK+PRANTYFRINLKG Y +VKNC+LTEL+I
Sbjct:   566 SDVDPKSQSPPRCIIDEPFMKFWYKLDETFKVPRANTYFRINLKGAYASVKNCLLTELYI 625

Query:   241 HLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDD 300
             +LLKDELNEIIYQAS+AKLETS+S++ DKLELKVYGFN+K+P LLSKILAIAKSF+P+ +
Sbjct:   626 NLLKDELNEIIYQASIAKLETSLSMYGDKLELKVYGFNEKIPALLSKILAIAKSFMPNLE 685

Query:   301 RFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPE 360
             RFKVIKE++ R  +NTNMKPL+HS+YLRLQ+LC+  YD DEKLS+L+ LSL DL +FIPE
Sbjct:   686 RFKVIKENMERGFRNTNMKPLNHSTYLRLQLLCKRIYDSDEKLSVLNDLSLDDLNSFIPE 745

Query:   361 LRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVS 420
             LRSQ++IE LCHGNLS++EA++ISNIFK   +V+PLP + RH E + C P GA LVR+V+
Sbjct:   746 LRSQIFIEALCHGNLSEDEAVNISNIFKDSLTVEPLPSKCRHGEQITCFPMGAKLVRDVN 805

Query:   421 VKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECS 480
             VKNK ETNSV+ELY+QIE E+    TR KA++DLF EI+EEP FNQLRTKEQLGYVVEC 
Sbjct:   806 VKNKSETNSVVELYYQIEPEEAQS-TRTKAVLDLFHEIIEEPLFNQLRTKEQLGYVVECG 864

Query:   481 PRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISXXXXXXXXXXXXSFENYRSGLMAKLLE 540
             PR+TYRV GFCFC+QSSKY P++L  R+DNFI             S+E+YRSG++A+LLE
Sbjct:   865 PRLTYRVHGFCFCVQSSKYGPVHLLGRVDNFIKDIEGLLEQLDDESYEDYRSGMIARLLE 924

Query:   541 KDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLA 600
             KDPSL  E+N  W+QI DKRYMFD S KEAE+L+SI+K DVISWYKTY ++ SPKCRRLA
Sbjct:   925 KDPSLLSETNDLWSQIVDKRYMFDFSHKEAEELRSIQKKDVISWYKTYFRESSPKCRRLA 984

Query:   601 VRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQSLC 640
             VRVWGC+TN+KE++   K+  VI D  AFK +S+FY SLC
Sbjct:   985 VRVWGCDTNMKETQTDQKAVQVIADAVAFKSTSKFYPSLC 1024
GO:0003824 "catalytic activity" evidence=IEA
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0005829 "cytosol" evidence=IDA
UNIPROTKB|F1SC98 IDE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q24K02 IDE "Insulin-degrading enzyme" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P14735 IDE "Insulin-degrading enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|2861 Ide "insulin degrading enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-85 ide "insulin-degrading enzyme" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:96412 Ide "insulin degrading enzyme" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RGZ3 IDE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G3V1R5 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O43847 NRD1 "Nardilysin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00023945001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (1096 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query640
COG1025937 COG1025, Ptr, Secreted/periplasmic Zn-dependent pe 1e-101
PRK15101961 PRK15101, PRK15101, protease3; Provisional 8e-58
pfam05193182 pfam05193, Peptidase_M16_C, Peptidase M16 inactive 4e-08
TIGR02110696 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis 0.001
>gnl|CDD|223956 COG1025, Ptr, Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  330 bits (848), Expect = e-101
 Identities = 162/594 (27%), Positives = 280/594 (47%), Gaps = 28/594 (4%)

Query: 2   HRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRF 61
             S    +F +S  LTD GL     +I   +QY+ LLR+    K+ F ELQ++ +++FR+
Sbjct: 322 PISGNYGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRY 381

Query: 62  AEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKS 121
             +    DY + LA N+   P EH +Y   +   +D + I+  L    PEN R+ ++SK 
Sbjct: 382 PSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERLALMTPENARLWLISKL 441

Query: 122 FAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDI 181
               +      ++G  Y  +D +   ++ W+   +  + L LP  N FIP D S+  ++ 
Sbjct: 442 EEHDKA---AYFYGFPYQVDDYTAQPLDAWQQKADS-IELSLPEPNPFIPDDVSLIKSE- 496

Query: 182 SNDLVTVTSPTCIIDEPLIRFWYKLDNTFK-LPRANTYFRINLKGGYDNVKNCILTELFI 240
                  T P  + ++P +R WY  ++ F   P+A+    I       + +N +LTEL+ 
Sbjct: 497 ----KKFTFPQLLSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYA 552

Query: 241 HLLKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDD 300
           +L  D L+++ YQAS+A L  S++  S+ L+L + GF  +LP LL   L    S    +D
Sbjct: 553 YLANDALDKLSYQASLAGLSFSLAANSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVDED 612

Query: 301 RFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIP 359
           RF+  K  +   LKN    KP   +      +L   ++  +E+ + L  +S+ +  AF  
Sbjct: 613 RFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPYWSREERRNALESVSVEEFAAFRD 672

Query: 360 ELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVIC----LPSGANL 415
            L + +++E L  GNL++ +A        ++       +              L  G   
Sbjct: 673 TLLNGVHLEMLVLGNLTEADA-------TNLAETLQKKLPAIGSTWYRNPSVYLLKGGTR 725

Query: 416 VRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGY 475
           +           N+ I    Q ++ K   L+ L        +++   FF+QLRTKEQLGY
Sbjct: 726 IFETVGGESDSANAAILYPQQYDEIKSSALSSL------LGQLIHPWFFDQLRTKEQLGY 779

Query: 476 VVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLM 535
            V   PR   R  G  F +QS+  +P YL ERI+ F+   +  L  + +E FE  +  L+
Sbjct: 780 AVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLETAEPELREMSEEDFEQIKKALI 839

Query: 536 AKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYL 589
            ++L+   +L  E++R W         FD  +K+ E +K++ K  ++ +++  L
Sbjct: 840 NQILQPPQNLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLLDFFENAL 893

Length = 937
>gnl|CDD|185056 PRK15101, PRK15101, protease3; Provisional Back     alignment and domain information
>gnl|CDD|218490 pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain Back     alignment and domain information
>gnl|CDD|233732 TIGR02110, PQQ_syn_pqqF, coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 640
KOG0959974 consensus N-arginine dibasic convertase NRD1 and r 100.0
COG1025937 Ptr Secreted/periplasmic Zn-dependent peptidases, 100.0
PRK15101961 protease3; Provisional 100.0
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 100.0
TIGR02110 696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 99.93
PRK15101 961 protease3; Provisional 99.92
KOG0960467 consensus Mitochondrial processing peptidase, beta 99.9
KOG2067472 consensus Mitochondrial processing peptidase, alph 99.86
PTZ00432 1119 falcilysin; Provisional 99.82
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 99.73
PTZ004321119 falcilysin; Provisional 99.73
COG1026 978 Predicted Zn-dependent peptidases, insulinase-like 99.41
COG1026978 Predicted Zn-dependent peptidases, insulinase-like 99.38
TIGR02110696 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable pe 99.33
KOG2019998 consensus Metalloendoprotease HMP1 (insulinase sup 99.28
COG1025 937 Ptr Secreted/periplasmic Zn-dependent peptidases, 99.23
KOG2583429 consensus Ubiquinol cytochrome c reductase, subuni 99.18
KOG2019 998 consensus Metalloendoprotease HMP1 (insulinase sup 99.11
KOG0959 974 consensus N-arginine dibasic convertase NRD1 and r 99.04
PF00675149 Peptidase_M16: Insulinase (Peptidase family M16) T 98.78
KOG0961 1022 consensus Predicted Zn2+-dependent endopeptidase, 98.6
KOG09611022 consensus Predicted Zn2+-dependent endopeptidase, 98.48
COG0612438 PqqL Predicted Zn-dependent peptidases [General fu 98.01
KOG2067472 consensus Mitochondrial processing peptidase, alph 97.26
KOG0960467 consensus Mitochondrial processing peptidase, beta 95.97
PF05193184 Peptidase_M16_C: Peptidase M16 inactive domain; In 95.79
PF08367248 M16C_assoc: Peptidase M16C associated; InterPro: I 92.02
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.5e-82  Score=685.85  Aligned_cols=626  Identities=39%  Similarity=0.655  Sum_probs=576.2

Q ss_pred             CCCcceEEEEEEEcchhhhhcHHHHHHHHHHHHHHHHhCCCchHHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCC
Q 006560            3 RSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYP   82 (640)
Q Consensus         3 ~~~~~~~f~i~i~Lt~~G~~~~~~ii~~~~~~i~~l~~~~~~~~~~~e~~~~~~~~f~~~~~~~~~~~~~~la~~l~~~~   82 (640)
                      -+++|+.|.|++.||+.|++|+++|+..+|+||++++..|+.+|+|+|.+.+.+..|+|+++.+|++++..+|.+|+.||
T Consensus       328 ~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P  407 (974)
T KOG0959|consen  328 FASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYP  407 (974)
T ss_pred             cccccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCC
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeccccCccCCHHHHHHHHhccCcCceEEEEEeCCCCCCCcCcccccccccceeecCChHHHHHhcCCCCCCCCCC
Q 006560           83 AEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQ  162 (640)
Q Consensus        83 ~~~vl~~~~~~~~~d~~~i~~~l~~l~p~n~~i~~~~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~~~~~~~  162 (640)
                      +++||.|.+++.+||++.|+.+++.|+|.|+++++.+..+.+ +++..|+|||+.|.++++|+++++.|.+ +..++.+.
T Consensus       408 ~~~il~~~~ll~~~~p~~i~~~~~~L~p~n~~v~~~s~~~~~-~~d~~E~~ygt~y~~e~i~~~~~~~~~~-~~~~~~l~  485 (974)
T KOG0959|consen  408 VEDVLTGSYLLTEFDPDLIQEVLSSLVPSNMRVILVSRSFEG-KTDKAEPWYGTAYKVEDIPAEIIKEWEN-SHLNPELH  485 (974)
T ss_pred             hHHhhcchhhhhhcChHHHHHHHHhcCcccceeeeeeecccc-ccccccceeccccccccCCHHHHHHhhc-cCcccccc
Confidence            999999999999999999999999999999999999988833 4788999999999999999999999976 56788999


Q ss_pred             CCCCCCccCCCccccccccCCCCCCCCCCeEeecCCceEEEeeccCcccCcceEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 006560          163 LPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHL  242 (640)
Q Consensus       163 lP~~N~~ip~~~~l~~~~~~~~~~~~~~P~~~~~~~g~~v~~~~d~~f~~P~~~i~~~~~~~~~~~~~~~~~~~~l~~~~  242 (640)
                      ||.+|.|||++|++...+.    .....|.++.+++..++||++|+.|+.||+.+.+.|.+|....++.+.+++.++..+
T Consensus       486 lP~~nefI~t~f~~~~~~~----~~~~~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~  561 (974)
T KOG0959|consen  486 LPTPNEFIPTDFSILPAPI----PKLEYPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRL  561 (974)
T ss_pred             CCCCCcccccccccccccC----ccccCCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHH
Confidence            9999999999999887652    345679999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhcccccccEEEEEEecceeEEEEeecCCCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhccc-cCcc
Q 006560          243 LKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTN-MKPL  321 (640)
Q Consensus       243 l~~~l~~~~~~a~~ag~~~~~~~~~~g~~i~~~g~s~~l~~~l~~~~~~l~~~~~~~~~f~~~k~~~~~~l~~~~-~~p~  321 (640)
                      +.+.+.+..|.|..||++++++.+..|+.+++.||+++++.+++.+++.|.++.++++.|+.+|+.+.++++|.. .+|+
T Consensus       562 l~d~l~E~~Y~A~~aGl~~~~~~s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~  641 (974)
T KOG0959|consen  562 LKDQLNEYLYPALLAGLTYSLSSSSKGVELRVSGFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPY  641 (974)
T ss_pred             HHHHHhHHHHHHHhccceEEeeecCCceEEEEeccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999966 5899


Q ss_pred             chHHHHHHHhccCCCCCHHHHHhhhccCCHHHHHHHHHHHHhcceeEEEEeccCCHHHHHHHHHHHHhhcCCC-----CC
Q 006560          322 SHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ-----PL  396 (640)
Q Consensus       322 ~~a~~~~~~~l~~~~~~~~~~~~~l~~it~ed~~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~l~~~-----~~  396 (640)
                      .++.+.+.-++.+..|+..+.+++++.++++|+..|...++.+.+++++|+||++.++|.++++.+.+.++..     |+
T Consensus       642 ~~a~~~~~lll~~~~W~~~e~~~al~~~~le~~~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~  721 (974)
T KOG0959|consen  642 QLANDYLLLLLEESIWSKEELLEALDDVTLEDLESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPL  721 (974)
T ss_pred             HHHHHHHHHHhhccccchHHHHHHhhcccHHHHHHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccc
Confidence            9999999888889999999999999999999999999999999999999999999999999999888888321     22


Q ss_pred             CccccccceEEEcCCCCeEEEEeecCCCCCCCeEEEEEEecccccCcchHHHHHHHHHHHHHhchhhHHHHHhhcccceE
Q 006560          397 PIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYV  476 (640)
Q Consensus       397 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LR~k~~LgY~  476 (640)
                      ........+...+|.|..+++... .++.+.|+++.+|||    +|..+....+...|+.+++..++|+.||||+||||+
T Consensus       722 ~~~~~~~~~~~~lp~G~~~~~~~~-~n~~~~ns~i~~~~Q----~~~~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYi  796 (974)
T KOG0959|consen  722 FRSEHLPRREIQLPNGDYYFYRHL-LNKTDDNSCIEVYYQ----IGVQDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYI  796 (974)
T ss_pred             cccccCcccceeccCCceEEEEcc-cccCCCCceEEEEEE----cccchhHHHHHHHHHHHHhccchHHhhhhHHhhCeE
Confidence            222233445678899988764333 577889999999999    899999999999999999999999999999999999


Q ss_pred             EEeeeeeeCceeeEEEEEEcCCCChhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHH
Q 006560          477 VECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQI  556 (640)
Q Consensus       477 v~s~~~~~~~~~~~~~~vqs~~~~~~~~~~~i~~fl~~~~~~l~~~se~ef~~~k~~l~~~~~~~~~sl~~~~~~~w~~i  556 (640)
                      |++..+...|..++.+.|||. ++++.++.+|+.|++.+.+.+..|++++|+..+.++|....+++.++..++.++|.+|
T Consensus       797 v~~~~r~~~G~~~~~i~Vqs~-~~~~~le~rIe~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei  875 (974)
T KOG0959|consen  797 VSTGVRLNYGTVGLQITVQSE-KSVDYLEERIESFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEI  875 (974)
T ss_pred             eeeeeeeecCcceeEEEEccC-CCchHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence            999999999999999999998 7999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccccccchHhHHHHhcCCHHHHHHHHHHHcccCCCCcceEEEEEecCCCCcccccc---cC----CCceeecChHHH
Q 006560          557 TDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEK---HS----KSALVIKDLTAF  629 (640)
Q Consensus       557 ~~~~~~f~~~~~~~~~l~~vT~~dv~~~~~~~l~~~~~~~~~l~i~v~g~~~~~~~~~~---~~----~~~~~~~~~~~~  629 (640)
                      ..+.|.|++.++.+++++.||++|+..++..++...+.+++++++.+.|+....+....   ..    .....|+|...|
T Consensus       876 ~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~~~~a~~~~~lsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~d~~~f  955 (974)
T KOG0959|consen  876 IIGQYNFDRDEKEVEALKKITKEDVINFFDEYIRKGAAKRKKLSVHVHGKQLDEEASSEKIKSQSENLLKIKEITDIVAF  955 (974)
T ss_pred             HhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhccccchhcceEEEEecCchhhhhhhcccchhhhhhcccccchHHHHHh
Confidence            99999999999999999999999999999999999889999999999999654321111   10    012348899999


Q ss_pred             hccCcccccCC
Q 006560          630 KLSSEFYQSLC  640 (640)
Q Consensus       630 ~~~~~~~~~~~  640 (640)
                      |.....||..|
T Consensus       956 k~~~~l~~~~~  966 (974)
T KOG0959|consen  956 KRSLPLYPLVK  966 (974)
T ss_pred             hcccccccccc
Confidence            99999999765

>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>PRK15101 protease3; Provisional Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PTZ00432 falcilysin; Provisional Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] Back     alignment and domain information
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF Back     alignment and domain information
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion] Back     alignment and domain information
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only] Back     alignment and domain information
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query640
3cww_A990 Crystal Structure Of Ide-Bradykinin Complex Length 1e-93
2wby_A990 Crystal Structure Of Human Insulin-Degrading Enzyme 8e-93
3qz2_A990 The Structure Of Cysteine-Free Human Insulin Degrad 8e-93
3e4a_A1019 Human Ide-Inhibitor Complex At 2.6 Angstrom Resolut 8e-93
3hgz_A969 Crystal Structure Of Human Insulin-Degrading Enzyme 8e-93
3e4z_A990 Crystal Structure Of Human Insulin Degrading Enzyme 5e-92
2g47_A990 Crystal Structure Of Human Insulin-Degrading Enzyme 1e-90
2jg4_A990 Substrate-Free Ide Structure In Its Closed Conforma 4e-90
3p7l_A978 Rat Insulin Degrading Enzyme (Insulysin) Length = 9 2e-89
3tuv_A1019 Crystal Structure Of Insulysin With Bound Atp Lengt 3e-89
3p7o_A1019 Rat Insulin Degrading Enzyme (Insulysin) E111f Muta 3e-89
1q2l_A939 Crystal Structure Of Pitrilysin Length = 939 5e-37
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex Length = 990 Back     alignment and structure 
Iteration: 1

 Score =  340 bits (873), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 210/646 (32%), Positives = 341/646 (52%), Gaps = 44/646 (6%)
Query: 10  FVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDD 69
           F++++ LT+ GL  + DII  ++QYI+ LR   PQ+W+F+EL+D+  + FRF +++    
Sbjct: 344 FIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPRG 403
Query: 70  YAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFH 129
           Y +++AG L  YP E V+  EY+ E +  ++I+ +L    PEN+R+ +VSKSF    D  
Sbjct: 404 YTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTD-R 462
Query: 130 YEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVT 189
            E W+G++Y +E I  +++  W+N   ++   +LP++NEFIPT+F I    +  +     
Sbjct: 463 TEEWYGTQYKQEAIPDAVIAKWQN-AALNGKFKLPTKNEFIPTNFEI----LPLEAAATP 517
Query: 190 SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE 249
            P  I D  + + W+K D+ F LP+AN  F       Y +  +  +  L++ LLKD LNE
Sbjct: 518 YPALIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLNE 577
Query: 250 IIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDV 309
             Y A +A L   +      + L V G+NDK P+LL KI+    +F   + RF++IKE  
Sbjct: 578 YAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEARFEIIKEAY 637
Query: 310 VRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIE 368
           +R+L N    +P  H+ Y    ++ +  +  DE    L  ++L  L AFIP+L S+L+IE
Sbjct: 638 MRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHIE 697
Query: 369 GLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV------- 421
            L HGN++++ A+ I  + +           + H      LPS     R V +       
Sbjct: 698 ALLHGNITKQAALGIMQMVEDTL--------IEHAHTKPLLPSQLAAYREVQLPDRGWFV 749
Query: 422 ---KNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVE 478
              +N+   NS IE+Y+Q +    M+ T     ++LF +I+ EP FN LRTKEQLGY+V 
Sbjct: 750 YQQRNEVHNNSGIEIYYQTD----MQSTSENMFLELFAQIISEPAFNTLRTKEQLGYIVF 805
Query: 479 CSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISXXXXXXXXXXXXSFENYRSGLMAKL 538
             PR    + G  F IQS K  P YL+ R++ F+             +F+ +   L  + 
Sbjct: 806 SGPRRANGIQGLRFIIQSEK-PPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRR 864
Query: 539 LEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRR 598
           L+K   L+ ES ++W +I  ++Y FD+   E   LK++ K D+I +YK  L   +P+  +
Sbjct: 865 LDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTKADIIKFYKEMLAVDAPRRHK 924
Query: 599 LAVRVWG----CNTNIKESEKHSKSAL----------VIKDLTAFK 630
           ++V V       N  + E    +   L          VI+++TAFK
Sbjct: 925 VSVHVLAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQNMTAFK 970
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Insulin Length = 990 Back     alignment and structure
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading Enzyme Length = 990 Back     alignment and structure
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution Length = 1019 Back     alignment and structure
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amylin Length = 969 Back     alignment and structure
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In Complex With Insulin-Like Growth Factor Ii Length = 990 Back     alignment and structure
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In Complex With Amyloid-Beta (1-40) Length = 990 Back     alignment and structure
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation Length = 990 Back     alignment and structure
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) Length = 978 Back     alignment and structure
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp Length = 1019 Back     alignment and structure
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With Two Bound Peptides Length = 1019 Back     alignment and structure
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin Length = 939 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query640
3cww_A990 Insulysin, insulin-degrading enzyme, insulinase; A 1e-146
1q2l_A939 Protease III; hydrolase; 2.20A {Escherichia coli s 1e-144
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Length = 990 Back     alignment and structure
 Score =  448 bits (1152), Expect = e-146
 Identities = 207/647 (31%), Positives = 341/647 (52%), Gaps = 32/647 (4%)

Query: 9   IFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQD 68
            F++++ LT+ GL  + DII  ++QYI+ LR   PQ+W+F+EL+D+  + FRF +++   
Sbjct: 343 FFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQELKDLNAVAFRFKDKERPR 402

Query: 69  DYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDF 128
            Y +++AG L  YP E V+  EY+ E +  ++I+ +L    PEN+R+ +VSKSF    D 
Sbjct: 403 GYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTD- 461

Query: 129 HYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTV 188
             E W+G++Y +E I  +++  W+N        +LP++NEFIPT+F I   + +      
Sbjct: 462 RTEEWYGTQYKQEAIPDAVIAKWQNAALNG-KFKLPTKNEFIPTNFEILPLEAAATPYPA 520

Query: 189 TSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN 248
                I D  + + W+K D+ F LP+AN  F       Y +  +  +  L++ LLKD LN
Sbjct: 521 ----LIKDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKDSLN 576

Query: 249 EIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKED 308
           E  Y A +A L   +      + L V G+NDK P+LL KI+    +F   + RF++IKE 
Sbjct: 577 EYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEARFEIIKEA 636

Query: 309 VVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYI 367
            +R+L N    +P  H+ Y    ++ +  +  DE    L  ++L  L AFIP+L S+L+I
Sbjct: 637 YMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALADVTLPRLKAFIPQLLSRLHI 696

Query: 368 EGLCHGNLSQEEAIHISNIFKSIF----SVQPLPIEMRHQECVICLPSGANLVRNVSVKN 423
           E L HGN++++ A+ I  + +         +PL          + LP     V     +N
Sbjct: 697 EALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLAAYREVQLPDRGWFV--YQQRN 754

Query: 424 KCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRV 483
           +   NS IE+Y+Q      M+ T     ++LF +I+ EP FN LRTKEQLGY+V   PR 
Sbjct: 755 EVHNNSGIEIYYQT----DMQSTSENMFLELFAQIISEPAFNTLRTKEQLGYIVFSGPRR 810

Query: 484 TYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDP 543
              + G  F IQS K  P YL+ R++ F+  +++ +E + +E+F+ +   L  + L+K  
Sbjct: 811 ANGIQGLRFIIQSEK-PPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPK 869

Query: 544 SLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRV 603
            L+ ES ++W +I  ++Y FD+   E   LK++ K D+I +YK  L   +P+  +++V V
Sbjct: 870 KLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTKADIIKFYKEMLAVDAPRRHKVSVHV 929

Query: 604 WGCNTNIKESEK--------------HSKSALVIKDLTAFKLSSEFY 636
                +                          VI+++TAFK     +
Sbjct: 930 LAREMDSNPVVGEFPAQNDINLSQAPALPQPEVIQNMTAFKRGLPLF 976
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Length = 939 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query640
1q2l_A939 Protease III; hydrolase; 2.20A {Escherichia coli s 100.0
3cww_A990 Insulysin, insulin-degrading enzyme, insulinase; A 100.0
3gwb_A434 Peptidase M16 inactive domain family protein; pept 100.0
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 100.0
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 100.0
3eoq_A406 Putative zinc protease; two similar domains of bet 100.0
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 100.0
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 100.0
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 100.0
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 100.0
2fge_A995 Atprep2;, zinc metalloprotease (insulinase family) 100.0
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 100.0
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 100.0
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 100.0
3go9_A492 Insulinase family protease; IDP00573, structural g 99.97
1q2l_A 939 Protease III; hydrolase; 2.20A {Escherichia coli s 99.94
3s5m_A 1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 99.91
3cww_A 990 Insulysin, insulin-degrading enzyme, insulinase; A 99.9
2fge_A 995 Atprep2;, zinc metalloprotease (insulinase family) 99.9
3s5m_A1193 Falcilysin; M16 metalloprotease, peptidase, hydrol 99.89
3cx5_B352 Cytochrome B-C1 complex subunit 2, mitochondrial; 99.88
3ih6_A197 Putative zinc protease; bordetella pertussis toham 99.64
3gwb_A434 Peptidase M16 inactive domain family protein; pept 98.55
3hdi_A421 Processing protease; CAGE structure, M16B peptidas 98.51
1hr6_B443 Beta-MPP, mitochondrial processing peptidase beta 98.47
3cx5_A431 Cytochrome B-C1 complex subunit 1, mitochondrial; 98.45
3ami_A445 Zinc peptidase; alpha/beta, zinc binding, hydrolas 98.45
3amj_B424 Zinc peptidase inactive subunit; alpha/beta, zinc 98.42
1pp9_B439 Ubiquinol-cytochrome C reductase complex core Pro 98.42
3eoq_A406 Putative zinc protease; two similar domains of bet 98.39
1pp9_A446 Ubiquinol-cytochrome C reductase complex core Pro 98.38
1hr6_A475 Alpha-MPP, mitochondrial processing peptidase alph 98.34
3ih6_A197 Putative zinc protease; bordetella pertussis toham 98.32
3go9_A492 Insulinase family protease; IDP00573, structural g 98.14
3d3y_A425 Uncharacterized protein; APC29635, conserved prote 97.99
3cx5_B 352 Cytochrome B-C1 complex subunit 2, mitochondrial; 96.01
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
Probab=100.00  E-value=3.5e-67  Score=613.38  Aligned_cols=612  Identities=21%  Similarity=0.356  Sum_probs=537.2

Q ss_pred             CCcceEEEEEEEcchhhhhcHHHHHHHHHHHHHHHHhCCCchHHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCCc
Q 006560            4 SSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPA   83 (640)
Q Consensus         4 ~~~~~~f~i~i~Lt~~G~~~~~~ii~~~~~~i~~l~~~~~~~~~~~e~~~~~~~~f~~~~~~~~~~~~~~la~~l~~~~~   83 (640)
                      ...++.|.|.+.++++|..+++++++.++++|+.+++.|++++++++.++.....|.++....+.+++..++.+|..+++
T Consensus       322 ~~~~g~f~i~~~~~~~~~~~~~~~~~~i~~~l~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  401 (939)
T 1q2l_A          322 NGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPV  401 (939)
T ss_dssp             TSSEEEEEEEEEECHHHHHTHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHTTSCG
T ss_pred             CCCceEEEEEEEEChhhhhhHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHhhcCCH
Confidence            35679999999999999999999999999999999999999999999999999999998877788899999999988888


Q ss_pred             cceeeccccCccCCHHHHHHHHhccCcCceEEEEEeCCCCCCCcCcccccccccceeecCChHHHHHhcCCCCCCCCCCC
Q 006560           84 EHVIYGEYMYEVWDEEMIKHLLGFFMPENMRIDVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQL  163 (640)
Q Consensus        84 ~~vl~~~~~~~~~d~~~i~~~l~~l~p~n~~i~~~~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~~~~~~~l  163 (640)
                      ++++.+...+..++++++++++++|+|+|+++++++|+.   .....++||+++|.+.+++++.++.|.. ......+.+
T Consensus       402 ~~~~~~~~~i~~vt~~~i~~~~~~l~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  477 (939)
T 1q2l_A          402 EHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKE---PHNKTAYFVDAPYQVDKISAQTFADWQK-KAADIALSL  477 (939)
T ss_dssp             GGTTTTTTCCCCCCHHHHHHHHHHCSGGGCEEEEECTTC---CCCEECTTTCCEEEEEECCHHHHHHHHH-HHHTCCCCC
T ss_pred             HHHhcCchhhhccCHHHHHHHHHhcCHHHcEEEEEcCCC---CCCcccceeCCeeeeeeCCHHHHHHHhc-cCccccccC
Confidence            899888889999999999999999999999999999865   3456799999999999999999999976 233457889


Q ss_pred             CCCCCccCCCccccccccCCCCCCCCCCeEeecCCceEEEeeccCcccCc-ceEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 006560          164 PSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLP-RANTYFRINLKGGYDNVKNCILTELFIHL  242 (640)
Q Consensus       164 P~~N~~ip~~~~l~~~~~~~~~~~~~~P~~~~~~~g~~v~~~~d~~f~~P-~~~i~~~~~~~~~~~~~~~~~~~~l~~~~  242 (640)
                      |.+|+|+|+++++....     .....|..+..+||++||+++++.|++| ++.|.+.+.+|....++++.+++.|+..+
T Consensus       478 p~~n~~~~~~~~~~~~~-----~~~~~p~~~~l~ng~~v~~~~~~~f~~pp~~~i~l~~~~~~~~~~~~~~~~~~l~~~l  552 (939)
T 1q2l_A          478 PELNPYIPDDFSLIKSE-----KKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYL  552 (939)
T ss_dssp             CCCCTTCCCCCCCCCCS-----SCCSSCEEEEEETTEEEEEECCSSCTTSSEEEEEEEEECGGGGSSHHHHHHHHHHHHH
T ss_pred             CCCCcCCCcCcccccCc-----CCCCCCEEEEECCCceEeecCCCccCCCCcEEEEEEEeCCcccCCHHHHHHHHHHHHH
Confidence            99999999999876432     2345689999999999999999999886 99999999999988889999999999999


Q ss_pred             HHHHHhhhhhcccccccEEEEEEecceeEEEEeecCCCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhcccc-Ccc
Q 006560          243 LKDELNEIIYQASVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPL  321 (640)
Q Consensus       243 l~~~l~~~~~~a~~ag~~~~~~~~~~g~~i~~~g~s~~l~~~l~~~~~~l~~~~~~~~~f~~~k~~~~~~l~~~~~-~p~  321 (640)
                      +..++.+..|.+.++|++++++. .+|+.++++|++++++.+++++.+.+.+|.++++.|+++|+++++.+++... +|.
T Consensus       553 l~~g~~~~~~~~~l~G~~~~~~~-~~g~~~~~~g~~~~l~~~l~ll~~~l~~p~~~~~~f~~~k~~~~~~l~~~~~~~p~  631 (939)
T 1q2l_A          553 AGLALDQLSNQASVGGISFSTNA-NNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAF  631 (939)
T ss_dssp             HHHHHHHHHHHHHHTTEEEEEEE-SSEEEEEEEEESSSHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHHSCSCHH
T ss_pred             HHHHHHHHhhHHHHcCcEEEEee-CCcEEEEEEcccHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhhhcChH
Confidence            99999999999999999999999 9999999999999999999999999999999999999999999999999854 799


Q ss_pred             chHHHHHHHhccCCCCCHHHHHhhhccCCHHHHHHHHHHHHhcceeEEEEeccCCHHHHHHHHHHHHhhcCCCCCCcccc
Q 006560          322 SHSSYLRLQVLCQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMR  401 (640)
Q Consensus       322 ~~a~~~~~~~l~~~~~~~~~~~~~l~~it~ed~~~~~~~~~~~~~~~~~v~Gni~~~~~~~l~~~~~~~l~~~~~~~~~~  401 (640)
                      .++.+.+..+++++.|+..+.++.|+++|.+|+.+|+++++.+.+++++|+||++.+++.++++.+++.++.++.+.   
T Consensus       632 ~~a~~~l~~~l~~~~~~~~~~~~~l~~it~~~l~~f~~~~~~~~~~~~~vvGn~~~~~~~~l~~~~~~~l~~~~~~~---  708 (939)
T 1q2l_A          632 EQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEW---  708 (939)
T ss_dssp             HHHHHHHHHTTSSSCCCHHHHHHHGGGCCHHHHHHHHHHHHTTCEEEEEEEESCCHHHHHHHHHHHHHHHTCCCSCC---
T ss_pred             HHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHHHHHHhhheEEEEEEcCCCHHHHHHHHHHHHHHHccCCccc---
Confidence            88999999999887788889999999999999999999999999999999999999999999999888887543211   


Q ss_pred             ccceEEEcCCCCeEEEEeecCCCCCCCeEE-EEEEecccccCcchHHHHHHHHHHHHHhchhhHHHHHhhcccceEEEee
Q 006560          402 HQECVICLPSGANLVRNVSVKNKCETNSVI-ELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECS  480 (640)
Q Consensus       402 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LR~k~~LgY~v~s~  480 (640)
                      ........+.+....+...  .+ ..++++ .++++    .|..+.+..+++.+|+++++++||++|||++||||+|+++
T Consensus       709 ~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~----~~~~~~~~~~~~~lL~~~~~s~lf~~LRek~gl~Y~v~s~  781 (939)
T 1q2l_A          709 CRNKDVVVDKKQSVIFEKA--GN-STDSALAAVFVP----TGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAF  781 (939)
T ss_dssp             CCCEEECCCSCEEEEEEEC--CS-SSCEEEEEEEEC----SSCCHHHHHHHHHHHHHHHHHHHTHHHHTSCCSSSCEEEE
T ss_pred             cccceEEeCCCceEEEecC--CC-CCCceeEEEEEe----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceeeee
Confidence            1112222233333222222  22 244555 67788    7777788889999999999999999999999999999999


Q ss_pred             eeeeCceeeEEEEEEcCCCChhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhccc
Q 006560          481 PRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKR  560 (640)
Q Consensus       481 ~~~~~~~~~~~~~vqs~~~~~~~~~~~i~~fl~~~~~~l~~~se~ef~~~k~~l~~~~~~~~~sl~~~~~~~w~~i~~~~  560 (640)
                      .....+..|+.|+||++.++|+.+.++|+.|++++.+.++++|++||+++|+++++++....+|+..+++++|..+..++
T Consensus       782 ~~~~~~~~g~~~~i~s~~~~p~~~~~~i~~~~~~~~~~~~~~t~~el~~~k~~l~~~~~~~~~s~~~~~~~~w~~i~~~~  861 (939)
T 1q2l_A          782 PMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGN  861 (939)
T ss_dssp             EEEETTEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHTC
T ss_pred             EeecCCeeEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC
Confidence            88777888888889996679999999999999999887788999999999999999999999999999999999999888


Q ss_pred             cccccchHhHHHHhcCCHHHHHHHHHHHcccCCCCcceEEEEEecCCCCcccccccCCCceeecChHHHhccCccccc
Q 006560          561 YMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQS  638 (640)
Q Consensus       561 ~~f~~~~~~~~~l~~vT~~dv~~~~~~~l~~~~~~~~~l~i~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  638 (640)
                      +.|++.+++++.|++||++||++++++++.+  +++.+++|+|+|+.+...+...+ .+...|+|+.+||+....||.
T Consensus       862 ~~~d~~~~~~~~i~~vT~~dv~~~a~~~l~~--~~~~~l~v~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  936 (939)
T 1q2l_A          862 MRFDSRDKIVAQIKLLTPQKLADFFHQAVVE--PQGMAILSQISGSQNGKAEYVHP-EGWKVWENVSALQQTMPLMSE  936 (939)
T ss_dssp             TTCCHHHHHHHHHHTCCHHHHHHHHHHHTTS--CSSEEEEEEECCSSHHHHCCCCC-TTCEECSCHHHHHTTSCEEEC
T ss_pred             CCCChHHHHHHHHhcCCHHHHHHHHHHHhcC--CCCCEEEEEEecCCCCccccccc-CCCcEeCCHHHHhhcCccccc
Confidence            8999999999999999999999999999864  46778999999997644332233 456789999999999999885
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>1q2l_A Protease III; hydrolase; 2.20A {Escherichia coli str} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading enzyme, criptidase, kinins, hydrolase; 1.96A {Homo sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A 3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A 2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ... Back     alignment and structure
>2fge_A Atprep2;, zinc metalloprotease (insulinase family); peptidasome, protease-peptide complex, hydrolase, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1 Back     alignment and structure
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3gwb_A Peptidase M16 inactive domain family protein; peptidase M16 family, PFL_5859, structural genomics, PSI-2, structure initiative; 1.90A {Pseudomonas fluorescens} Back     alignment and structure
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125} Back     alignment and structure
>1hr6_B Beta-MPP, mitochondrial processing peptidase beta subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_B 1hr8_B* 1hr9_B* Back     alignment and structure
>3cx5_A Cytochrome B-C1 complex subunit 1, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1p84_A* 2ibz_A* 1kb9_A* 3cxh_A* 1ezv_A* 1kyo_A* Back     alignment and structure
>3ami_A Zinc peptidase; alpha/beta, zinc binding, hydrolase; 2.40A {Sphingomonas} PDB: 3amj_C Back     alignment and structure
>3amj_B Zinc peptidase inactive subunit; alpha/beta, zinc binding, hydrolase; 3.00A {Sphingomonas} Back     alignment and structure
>1pp9_B Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_B* 1be3_B* 1l0n_B* 1ntk_B* 1ntm_B* 1ntz_B* 1nu1_B* 1l0l_B* 1ppj_B* 1sqq_B* 1sqv_B* 1sqx_B* 2a06_B* 2fyu_B* 2ybb_B* 1sqb_B* 1sqp_B* 1qcr_B* 2bcc_B* 3bcc_B* ... Back     alignment and structure
>3eoq_A Putative zinc protease; two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)- beta structure, hydrolase; 2.29A {Thermus thermophilus} Back     alignment and structure
>1pp9_A Ubiquinol-cytochrome C reductase complex core Pro mitochondrial; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: d.185.1.1 d.185.1.1 PDB: 1bgy_A* 1be3_A* 1l0n_A* 1ntk_A* 1ntm_A* 1ntz_A* 1nu1_A* 1l0l_A* 1ppj_A* 1sqq_A* 1sqv_A* 1sqx_A* 2a06_A* 2fyu_A* 2ybb_A* 1sqb_A* 1sqp_A* 1qcr_A* 1bcc_A* 2bcc_A* ... Back     alignment and structure
>1hr6_A Alpha-MPP, mitochondrial processing peptidase alpha subunit; hxxeh zinc-binding motif, hydrolase; HET: EPE; 2.50A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1hr7_A 1hr8_A* 1hr9_A* Back     alignment and structure
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A Back     alignment and structure
>3go9_A Insulinase family protease; IDP00573, structural genomics, for structural genomics of infectious diseases, csgid, HYDR; HET: MSE; 1.62A {Yersinia pestis} Back     alignment and structure
>3d3y_A Uncharacterized protein; APC29635, conserved protein, enterococcus faecalis V583, STR genomics, PSI-2, protein structure initiative; 1.95A {Enterococcus faecalis} Back     alignment and structure
>3cx5_B Cytochrome B-C1 complex subunit 2, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: d.185.1.1 d.185.1.1 PDB: 1kb9_B* 1kyo_B* 1p84_B* 2ibz_B* 1ezv_B* 3cxh_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 640
d1q2la2228 d.185.1.1 (A:733-960) Protease III {Escherichia co 1e-42
d1q2la3240 d.185.1.1 (A:264-503) Protease III {Escherichia co 2e-36
d1q2la1229 d.185.1.1 (A:504-732) Protease III {Escherichia co 3e-24
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Length = 228 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

 Score =  151 bits (382), Expect = 1e-42
 Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 7/210 (3%)

Query: 428 NSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRV 487
           +++  ++       G +     A   L  +I++  F+NQLRT+EQLGY V   P    R 
Sbjct: 24  SALAAVFVPT----GYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQ 79

Query: 488 FGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTY 547
           +G  F +QS+   P +L ER   F    +  L  +  + F   +  ++ ++L+   +L  
Sbjct: 80  WGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGE 139

Query: 548 ESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCN 607
           E+++           FD   K    +K +    +  ++   +    P+   +  ++ G +
Sbjct: 140 EASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV--EPQGMAILSQISG-S 196

Query: 608 TNIKESEKHSKSALVIKDLTAFKLSSEFYQ 637
            N K    H +   V ++++A + +     
Sbjct: 197 QNGKAEYVHPEGWKVWENVSALQQTMPLMS 226
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Length = 240 Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Length = 229 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query640
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 100.0
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 99.97
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 99.96
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 99.78
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.76
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.76
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.76
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 99.75
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 99.73
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 99.72
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 99.72
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 99.66
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 99.65
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 99.57
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 99.52
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 99.5
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 99.33
d1ppjb2204 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 98.58
d1hr6b2217 Mitochondrial processing peptidase (MPP) beta chai 98.45
d1ppja2209 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 98.43
d1q2la2228 Protease III {Escherichia coli [TaxId: 562]} 98.39
d1q2la1229 Protease III {Escherichia coli [TaxId: 562]} 98.25
d1hr6a2237 Mitochondrial processing peptidase (MPP) alpha cha 98.07
d3cx5a2218 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 97.94
d1hr6b1222 Mitochondrial processing peptidase (MPP) beta chai 97.91
d2fgea1258 Presequence protease 1, PREP1 {Thale cress (Arabid 97.89
d1ppja1232 Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [T 97.75
d3cx5a1213 Cytochrome bc1 core subunit 1 {Baker's yeast (Sacc 97.58
d2fgea2196 Presequence protease 1, PREP1 {Thale cress (Arabid 97.53
d1hr6a1220 Mitochondrial processing peptidase (MPP) alpha cha 97.29
d2fgea3268 Presequence protease 1, PREP1 {Thale cress (Arabid 97.09
d1ppjb1219 Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [T 97.04
d1q2la4240 Protease III {Escherichia coli [TaxId: 562]} 96.86
d3cx5b1202 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 95.73
d1q2la3240 Protease III {Escherichia coli [TaxId: 562]} 95.17
d2fgea4257 Presequence protease 1, PREP1 {Thale cress (Arabid 92.67
d3cx5b2150 Cytochrome bc1 core subunit 2 {Baker's yeast (Sacc 89.78
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: LuxS/MPP-like metallohydrolase
superfamily: LuxS/MPP-like metallohydrolase
family: MPP-like
domain: Protease III
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.5e-34  Score=268.67  Aligned_cols=224  Identities=18%  Similarity=0.341  Sum_probs=201.5

Q ss_pred             EEEcCCCCeEEEEeecCCCCCCCeEEEEEEecccccCcchHHHHHHHHHHHHHhchhhHHHHHhhcccceEEEeeeeeeC
Q 006560          406 VICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTY  485 (640)
Q Consensus       406 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~lf~~LR~k~~LgY~v~s~~~~~~  485 (640)
                      .+.++++...++.  ..+.++.|+++.+|+|    .|..+.+.++++.||+++|+++||++||||+||||+|+|+.....
T Consensus         4 ~v~~~~~~~~v~~--~~~~~~d~a~v~~y~q----~g~~~~~~~a~~~ll~~~ls~~~F~eLRtk~qLGY~V~s~~~~~~   77 (228)
T d1q2la2           4 DVVVDKKQSVIFE--KAGNSTDSALAAVFVP----TGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVG   77 (228)
T ss_dssp             EECCCSCEEEEEE--ECCSSSCEEEEEEEEC----SSCCHHHHHHHHHHHHHHHHHHHTHHHHTSCCSSSCEEEEEEEET
T ss_pred             eEEeCCCceEEEe--cCCCCCcchhheeeeC----CCCccHHHHHHHHHHHHHHhHHHHHHHHHHhccceEEEEEEEEeC
Confidence            4456666666643  3333455777778999    999999999999999999999999999999999999999999999


Q ss_pred             ceeeEEEEEEcCCCChhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHhcccccccc
Q 006560          486 RVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQ  565 (640)
Q Consensus       486 ~~~~~~~~vqs~~~~~~~~~~~i~~fl~~~~~~l~~~se~ef~~~k~~l~~~~~~~~~sl~~~~~~~w~~i~~~~~~f~~  565 (640)
                      +.+|+.|+|||+.++|..+.++|+.|+..+...+.+|+++||+.+|+++++++..++.|+.+++.++|..|..++++|++
T Consensus        78 ~~~g~~~~vqS~~~~~~~l~~~I~~fl~~~~~~l~~~~~eef~~~K~~li~~l~~~~~~l~~~~~~~w~~I~~~~~~Fd~  157 (228)
T d1q2la2          78 RQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDS  157 (228)
T ss_dssp             TEEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHTCTTCCH
T ss_pred             CcccEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCCCcCh
Confidence            99999999999989999999999999999998889999999999999999999999999999999999999999999999


Q ss_pred             chHhHHHHhcCCHHHHHHHHHHHcccCCCCcceEEEEEecCCCCcccccccCCCceeecChHHHhccCccccc
Q 006560          566 SQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHSKSALVIKDLTAFKLSSEFYQS  638 (640)
Q Consensus       566 ~~~~~~~l~~vT~~dv~~~~~~~l~~~~~~~~~l~i~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  638 (640)
                      .++.++.|++||++|+++|+++++.+  +++++++|++.|......+...+ .+++.|+|+++||.....||.
T Consensus       158 ~e~~~~~l~~lT~edl~~f~~~~i~~--~~~~~l~i~v~g~~~~~~~~~~~-~~~~~i~~i~~f~~~~~l~~~  227 (228)
T d1q2la2         158 RDKIVAQIKLLTPQKLADFFHQAVVE--PQGMAILSQISGSQNGKAEYVHP-EGWKVWENVSALQQTMPLMSE  227 (228)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHTTS--CSSEEEEEEECCSSHHHHCCCCC-TTCEECSCHHHHHTTSCEEEC
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHhcC--CcccEEEEEEecccCccccccCC-CCCeEeCCHHHHHhcCCCcCC
Confidence            99999999999999999999999975  46778999999997766665555 788999999999999998874
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hr6b2 d.185.1.1 (B:246-462) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ppja2 d.185.1.1 (A:234-442) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q2la2 d.185.1.1 (A:733-960) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q2la1 d.185.1.1 (A:504-732) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d3cx5a2 d.185.1.1 (A:240-457) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hr6b1 d.185.1.1 (B:24-245) Mitochondrial processing peptidase (MPP) beta chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ppja1 d.185.1.1 (A:2-233) Cytochrome bc1 core subunit 1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d3cx5a1 d.185.1.1 (A:27-239) Cytochrome bc1 core subunit 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hr6a1 d.185.1.1 (A:14-233) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ppjb1 d.185.1.1 (B:17-235) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q2la4 d.185.1.1 (A:24-263) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3cx5b1 d.185.1.1 (B:17-218) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q2la3 d.185.1.1 (A:264-503) Protease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2fgea4 d.185.1.1 (A:15-271) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d3cx5b2 d.185.1.1 (B:219-368) Cytochrome bc1 core subunit 2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure