Citrus Sinensis ID: 006591
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 639 | 2.2.26 [Sep-21-2011] | |||||||
| Q5MAU8 | 611 | Probable inactive purple | yes | no | 0.882 | 0.923 | 0.355 | 1e-99 | |
| Q8H1R2 | 615 | Probable inactive purple | no | no | 0.818 | 0.850 | 0.341 | 1e-91 | |
| Q9LMX4 | 613 | Probable inactive purple | no | no | 0.782 | 0.815 | 0.368 | 1e-90 | |
| Q687E1 | 368 | Nucleotide pyrophosphatas | N/A | no | 0.505 | 0.877 | 0.361 | 3e-58 | |
| Q9ZQ81 | 651 | Probable inactive purple | no | no | 0.780 | 0.766 | 0.299 | 2e-57 | |
| Q9LMG7 | 656 | Probable inactive purple | no | no | 0.652 | 0.635 | 0.326 | 1e-55 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.492 | 0.720 | 0.302 | 4e-29 | |
| Q8BX37 | 438 | Iron/zinc purple acid pho | no | no | 0.605 | 0.883 | 0.281 | 2e-28 | |
| Q6ZNF0 | 438 | Iron/zinc purple acid pho | yes | no | 0.474 | 0.691 | 0.298 | 5e-28 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.496 | 0.730 | 0.276 | 6e-27 |
| >sp|Q5MAU8|PPA27_ARATH Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/622 (35%), Positives = 319/622 (51%), Gaps = 58/622 (9%)
Query: 37 IVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFLNIS-VSKSSDLSDEEFVTVTVTGVL 95
IV + H N ++ ++ + F+++S + S D E+V V ++
Sbjct: 13 IVQVSSSHENGRGDQALSQIDIYAINLAQHHSAFIHVSPLVLGSQGQDTEWVNVVISNP- 71
Query: 96 HPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSNDPDYLSCK 155
PS DWV + SPA D SSC A T D P +C PVK + + PDY+
Sbjct: 72 EPSSDDWVGVFSPAKFDSSSC-------APTDDKEIAPFICSAPVKYMYAKSSPDYMK-- 122
Query: 156 KKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPVNFANPKK 215
T + F +IN R D F F GG + P ++S + V+F NPK
Sbjct: 123 ---------------TGNAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFINPKA 167
Query: 216 PLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEY------GDDGKTQTSEVSTFTQENMCSS 269
P+Y L+ + M +TW SG + V + G + + TFT+ +MC +
Sbjct: 168 PVYPRLA-LGKKWDEMTVTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNSMCGA 226
Query: 270 ALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVD----WSDKIQFRTPPAGGS 325
PA+ GW +PG+IHTA + L P+ +YR G E ++ WS F++ P G
Sbjct: 227 ----PARTVGWRDPGFIHTASLKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSPYPGQ 282
Query: 326 DEM-KFLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG 383
D + + + +GDMGK RD S E+ QPGSL+ + ++ N +D VFHIGDI+YA G
Sbjct: 283 DSLQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQLIKDLKN--IDIVFHIGDITYANG 340
Query: 384 FLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT 443
++ +WD F Q+ P+AS V YM A GNHERD+ +SGS Y DSGGECG+P ET F P
Sbjct: 341 YISQWDQFTAQVEPIASTVPYMVASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPA 400
Query: 444 PSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM- 502
+K + WYS + F V TEHDW SEQY++I++ LASVDR PWLIF HR +
Sbjct: 401 ENKAKFWYSADYGMFRFCVADTEHDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLG 460
Query: 503 YSSLDGFLSVDKF----FVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKD 558
YS+ D + F +S++ L K KVD+ +GHVHNYERTC +++N+CM
Sbjct: 461 YSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPIYQNQCM------ 514
Query: 559 DNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHA-TKQEIQL 617
DN Y + + +H ++G AG L F+ WS+ R +G+++ A +
Sbjct: 515 DNEKSHYSGA-FKGTIHVVVGGAGSHLSSFSSLKPKWSIFRDYDYGFVKLTAFDHSSLLF 573
Query: 618 EFVNADTRKVEDSFRIIRRQID 639
E+ + V DSF I R D
Sbjct: 574 EYKKSSNGAVHDSFTIFREYRD 595
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8H1R2|PPA24_ARATH Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/579 (34%), Positives = 299/579 (51%), Gaps = 56/579 (9%)
Query: 79 SDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHY 138
S D E+V + ++ P+ DW+ + SPA D +C + +G P +C
Sbjct: 59 SQGEDTEWVNLAISNP-KPTSDDWIGVFSPAKFDSGNC------WPTSGGKEKTPYICSS 111
Query: 139 PVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFAT 198
P+K + ++ PDY+ K F +IN R D+ F F+ G
Sbjct: 112 PIKYMYCNSHPDYMKSGNVTLK-----------------FQIINQRADVSFALFSNGVQE 154
Query: 199 PCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSG---DKEPQQVEYGDDG---K 252
P +L + PV F NPK P+Y L+ + M +TW SG D+ +E+ G +
Sbjct: 155 PHLLGVSNPVAFFNPKAPVYPRLA-LGKNWDEMTVTWTSGYNIDEAVPFIEWSAKGLPAR 213
Query: 253 TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVD-- 310
+ TF + +MC + PA+ GW +PG+ HT+ + L P+ YR G + V+
Sbjct: 214 RSPAGTLTFNRNSMCGN----PARGVGWRDPGFFHTSFLKELWPNREYIYRLGHDLVNGS 269
Query: 311 --WSDKIQFRTPPAGGSD-EMKFLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVNN 366
WS F + P G D + + + +GDMGK RD S E+ QPGSL+ + ++ +
Sbjct: 270 TIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQVIKDLKD 329
Query: 367 GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPD 426
+D VFHIGD++Y+ G+L +WD F Q+ P+AS V YM A GNHERD+ ++GS Y+ D
Sbjct: 330 --IDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMIASGNHERDWPDTGSFYAGTD 387
Query: 427 SGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486
SGGECG+P ET F P ++ + WY + F V +EHDW +EQYK+I+ LA+V
Sbjct: 388 SGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIENCLATV 447
Query: 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFV-----KSVEPLLLKNKVDLVLFGHVHNYE 541
DR PWLIF HR + S + + + F +S++ L K KVDL +GHVHNYE
Sbjct: 448 DRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGHVHNYE 507
Query: 542 RTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVA 601
RTC ++ ++C+ +N D Y + +H ++G AG L F+ WSL R
Sbjct: 508 RTCPIYESQCV------NNDKDHYS-GTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDY 560
Query: 602 KFGYLRGHATKQ-EIQLEFVNADTRKVEDSFRIIRRQID 639
FG+++ A+ + E+ + T +V DSF I R D
Sbjct: 561 DFGFVKLTASDHSSLLFEYKKSSTGQVYDSFNISRDYRD 599
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LMX4|PPA1_ARATH Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/567 (36%), Positives = 299/567 (52%), Gaps = 67/567 (11%)
Query: 97 PSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMS-NDPDYLSCK 155
PS DW+ + SPA + S+CP + + P LC PVK Q+ + ++P Y +
Sbjct: 74 PSDDDWIGVFSPADFNASTCPGDN-------KMVQPPRLCSAPVKFQYANFSNPRYTN-- 124
Query: 156 KKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPVNFANPKK 215
T GS+ +IN R+D F F+GG P +++ + V F NP
Sbjct: 125 ---------------TGTGSLKLQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNA 169
Query: 216 PLYGHLSSVDSTGTSMRLTWVSGD----KEPQQVEYGDDG---KTQTSEVSTFTQENMCS 268
P+Y L+ + M +TW SG EP VE+G G K + TF + +MC
Sbjct: 170 PVYPRLA-LGKEWDEMTVTWTSGYGLNLAEPV-VEWGVKGGERKLSPAGTLTFARNSMCG 227
Query: 269 SALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAGG 324
+ PA+ GW +PGYIHTA + L P+S +YR G A+ WS + QF++ P G
Sbjct: 228 A----PARTVGWRDPGYIHTAFLKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPG 283
Query: 325 SDEMK-FLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT 382
+ ++ + +GDMGKA D S+E+ Q SL+ K + ++ D+VFHIGDI YA
Sbjct: 284 QNSVQQVVIFGDMGKAEVDGSSEYNDFQRASLNTTKQLIKDLKK--TDAVFHIGDICYAN 341
Query: 383 GFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMP 442
G+L +WD F+ QI P+AS V YM A GNHER + NSGS Y DSGGECG+P ET F +P
Sbjct: 342 GYLSQWDQFIAQIEPIASTVPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVP 401
Query: 443 TPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM 502
++ + WYS + F V TEHDW +EQY +I+ LASVDR K PWLIF HR +
Sbjct: 402 AQNRAKVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVL 461
Query: 503 YSSLDGFLSVDKFFV-----KSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTK 557
S F + + F +S++ L K KVD+ ++GH HNYERTC V+++ C
Sbjct: 462 GYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCT----- 516
Query: 558 DDNGIDTYDHSNYTAP----VHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQ 613
+++ SNY AP +H + G G L +F+ WSL R +G+L+ A
Sbjct: 517 ------SHEKSNYKAPLNGTIHIVAGGGGAGLAEFSDLQPNWSLFRDYDYGFLKLTAIDH 570
Query: 614 -EIQLEFVNADTRKVEDSFRIIRRQID 639
+ E+ + +V DSF I + D
Sbjct: 571 SNLLFEYKKSSDGRVHDSFTISKDYRD 597
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q687E1|NPP_HORVU Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2 | Back alignment and function description |
|---|
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 186/340 (54%), Gaps = 17/340 (5%)
Query: 308 AVDWSDKIQFRTPPAGGSDEM-KFLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVN 365
+V W+ FR PP G + + + + +GDMGKA RD S E QPGSL+ + ++++
Sbjct: 22 SVVWAKPYTFRAPPTPGQNSLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLD 81
Query: 366 NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTP 425
N D VFHIGD+ YA G+L +WD F Q+ P++++ YM A GNHERD+ N+G +
Sbjct: 82 N--YDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVK 139
Query: 426 DSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLAS 485
DSGGECG+P ET + P ++ WY ++ F V +EHDW + QYK+I++ L++
Sbjct: 140 DSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLST 199
Query: 486 VDRSKTPWLIFAGHRPM-YSSLDGFLSVDKF----FVKSVEPLLLKNKVDLVLFGHVHNY 540
VDR PWLIF HR + YSS + F +S++ L + +VD+ FGHVHNY
Sbjct: 200 VDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNY 259
Query: 541 ERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRV 600
ERTC +++++C+ N T+ + + G G L + WS+ R
Sbjct: 260 ERTCPLYQSQCV-------NADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRD 312
Query: 601 AKFGYLRGHA-TKQEIQLEFVNADTRKVEDSFRIIRRQID 639
+G+ + A + E++ + KV DSF I R D
Sbjct: 313 HDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRD 352
|
Hydrolyzes pyrophosphate, phosphodiester and phosphosulfate linkages of nucleotide-sugars, sulfonucleotides and nucleoside di and triphosphates. Highest activity observed with the substrates ADP-glucose and adenosine 5'-phosphosulfate. Hordeum vulgare (taxid: 4513) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9ZQ81|PPA9_ARATH Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 278/618 (44%), Gaps = 119/618 (19%)
Query: 73 ISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNL 132
IS+S + + V + +GV PS DW+ + SP S P +
Sbjct: 24 ISISPQTLNRSGDIVVIKWSGVESPSDLDWLGIYSPPDS-----PHD------------- 65
Query: 133 PLLCHYPVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFF 192
H+ + +F+S+ P + S GSI + N+R++ F F
Sbjct: 66 ----HF-IGYKFLSDSPTWQSGS------------------GSISLPLTNLRSNYTFRIF 102
Query: 193 AGGFA----------------TPCILSRTQPVNFA-NPKKPLYGHLSSVDSTGTSMRLTW 235
+ T +L+ + +NF +P HLS D+ MR+ +
Sbjct: 103 HWTQSEINPKHQDHDHNPLPGTRHLLTESNQLNFRFAVNRPEQIHLSYTDNI-NEMRVVF 161
Query: 236 VSGDKEPQQVEYGDDGKTQTSEVST-----FTQENMCSSALPSPAKDFGWHNPGYIHTAV 290
V+GD E ++ YG+ K + ++ + E+MC + S GW +PG+ AV
Sbjct: 162 VTGDGEEREARYGEV-KDKLDNIAVARGVRYEIEHMCHAPANSTV---GWRDPGWTFDAV 217
Query: 291 MTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQ 350
M L+ Y+ GS+ WS+ F + G + + F+ +GDMG +T +
Sbjct: 218 MKNLKQGIRYYYQVGSDLKGWSEIHSFVSRNEGSEETLAFM-FGDMG-CYTPYTTFIRGE 275
Query: 351 PGSLSVVKAMSDEVNNGNVDS---VFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407
SLS VK + ++ D V HIGDISYA G+ WD F QI P+AS+V Y
Sbjct: 276 EESLSTVKWILRDIEALGDDKPVIVSHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVC 335
Query: 408 IGNHERDYVN-------SGSVYSTPDSGGECGIPYETYFPMPT-----------PSKDRP 449
IGNHE D+ N + VY DSGGECG+PY F MP P
Sbjct: 336 IGNHEYDWPNQPWKPDWAAYVYGK-DSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNL 394
Query: 450 WYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF 509
+YS + SVHF ISTE D+ +QY +++ DL SV+RSKTP+++ GHRPMY++
Sbjct: 395 YYSYDMGSVHFVYISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHRPMYTTSRKI 454
Query: 510 --LSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDH 567
++ + ++ +EPLL+KN V + L+GHVH YER C++ N C
Sbjct: 455 RDAAIREKMIEHLEPLLVKNNVTVALWGHVHRYERFCAISNNTC--------------GE 500
Query: 568 SNYTAPVHAIIGMAGFSLDKFNKNNATW-----------SLSRVAKFGYLRGHATKQEIQ 616
PVH +IGMAG + A S+ R +FGY+R A K+ +
Sbjct: 501 RWQGNPVHLVIGMAGKDSQPMWEPRANHEDVPIFPQPANSMYRGGEFGYIRLVANKERLT 560
Query: 617 LEFVNADTRKVEDSFRII 634
L +V +V D I+
Sbjct: 561 LSYVGNHDGEVHDVVEIL 578
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LMG7|PPA2_ARATH Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 232/475 (48%), Gaps = 58/475 (12%)
Query: 197 ATPCILSRTQPVNFANP-KKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDD----G 251
T +L+ ++ + F + P HLS + T MR+ +V+GD E + V YG+ G
Sbjct: 125 GTKHLLAESEQLTFGSGVGMPEQIHLSFTNMVNT-MRVMFVAGDGEERFVRYGESKDLLG 183
Query: 252 KTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDW 311
+ + + +E+MC S S GW +PG+I VM L Y+ GS++ W
Sbjct: 184 NSAAARGMRYEREHMCDSPANS---TIGWRDPGWIFDTVMKNLNDGVRYYYQVGSDSKGW 240
Query: 312 SDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVD 370
S+ + + + F+ +GDMG A +T Q S+S VK + ++ G+
Sbjct: 241 SEIHSYIARDVTAEETVAFM-FGDMGCA-TPYTTFIRTQDESISTVKWILRDIEALGDKP 298
Query: 371 SVF-HIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVN-------SGSVY 422
++ HIGDISYA G+ WD F Q+ P+AS V Y IGNHE D+ + S+Y
Sbjct: 299 AMISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDFSTQPWKPDWAASIY 358
Query: 423 STPDSGGECGIPYETYFPMP----------TPSKDRPWYSIEQASVHFTVISTEHDWWLN 472
D GGECG+PY F MP P +YS + +VHF ISTE ++
Sbjct: 359 GN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVYISTETNFLKG 417
Query: 473 SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLKNKVD 530
QY++I++DL SVDR KTP+++ GHRPMY++ + + + V+ +EPL +KN V
Sbjct: 418 GSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSNEVRDTMIRQKMVEHLEPLFVKNNVT 477
Query: 531 LVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNK 590
L L+GHVH YER C + N C T N PVH +IGMAG +
Sbjct: 478 LALWGHVHRYERFCPISNNTC-----------GTQWQGN---PVHLVIGMAGQDWQPIWQ 523
Query: 591 NNAT-----------WSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRII 634
S+ R +FGY R A K+++ + FV +V D+ ++
Sbjct: 524 PRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSFVGNHDGEVHDTVEML 578
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 166/384 (43%), Gaps = 69/384 (17%)
Query: 231 MRLTWVSGDKE-PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289
MR+TWV+ DK P VEYG T + S Q S + + + G IH
Sbjct: 60 MRVTWVTNDKSSPSFVEYG----TSPGKYSYLGQGESTSYS-------YIMYRSGKIHHT 108
Query: 290 VMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYI 349
V+ L+ + YR G E + +TPPA + F GD+G+ ST +I
Sbjct: 109 VIGPLEADTVYYYRCGGEGPE----FHLKTPPA--QFPITFAVAGDLGQTGWTKSTLDHI 162
Query: 350 QPGSLSVVKAMSDEVNNGNVDSVFHI--GDISYATGFLVEWDFFLHQITPVASRVSYMTA 407
+V H+ GD+SYA +WD F + P+AS +M
Sbjct: 163 DQCKYAV-----------------HLLPGDLSYADYMQHKWDTFGELVQPLASVRPWMVT 205
Query: 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMP---TPSKDRPWYSIEQASVHFTVIS 464
GNHE++ S P E + + + + MP + S +YS E A VH ++
Sbjct: 206 QGNHEKE--------SIPFIVDEF-VSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLG 256
Query: 465 TEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLL 524
+ D+ S+QY W++ DL+ VDR +TPWLI H P Y+S + + +EPLL
Sbjct: 257 SYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLL 316
Query: 525 LKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFS 584
+ VD+V GHVH YERT V K S+ PVH IG G
Sbjct: 317 YASGVDIVFTGHVHAYERTKRVNNGK-----------------SDPCGPVHITIGDGGNR 359
Query: 585 ---LDKFNKNNATWSLSRVAKFGY 605
K+ + WS+ R A FG+
Sbjct: 360 EGLARKYKDPSPEWSVFREASFGH 383
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8BX37|PAPL_MOUSE Iron/zinc purple acid phosphatase-like protein OS=Mus musculus GN=Papl PE=2 SV=2 | Back alignment and function description |
|---|
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 192/472 (40%), Gaps = 85/472 (18%)
Query: 192 FAGGFATPCILSRTQP-VNFANPK---KPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEY 247
F GG+ C+L P V A P HLS + GT M +TW + +V++
Sbjct: 4 FLGGWLFFCMLLPFSPGVQGAQEYPHVTPEQIHLSYLGEPGT-MTVTWTTWAPARSEVQF 62
Query: 248 GDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSE 307
G +Q S F + + YIH + LQP + YR GS
Sbjct: 63 G----SQLSGPLPFRAHGTARAFVDGGVL----RRKLYIHRVTLRKLQPGAQYVYRCGS- 113
Query: 308 AVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG 367
+ WS + +F G + +GDMG P +L ++ + G
Sbjct: 114 SQGWSRRFRFTALKNGVHWSPRLAVFGDMGAD----------NPKALPRLRR---DTQQG 160
Query: 368 NVDSVFHIGDISY-------ATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGS 420
D+V H+GD +Y G D F+ I PVA+ + YMT GNHE+ Y S
Sbjct: 161 MFDAVLHVGDFAYNMDQDNARVG-----DRFMRLIEPVAASLPYMTCPGNHEQRYNFSN- 214
Query: 421 VYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLN------SE 474
Y+ F MP ++ WYS + H STE ++L+ +
Sbjct: 215 --------------YKARFSMPGDNEGL-WYSWDLGPAHIISFSTEVYFFLHYGRHLIEK 259
Query: 475 QYKWIQKDL--ASVDRSKTPWLIFAGHRPMYSS---LDGFLSVDKFFVK-------SVEP 522
Q++W++ DL A+ +R PW+I GHRPMY S LD + K +E
Sbjct: 260 QFRWLENDLQKANKNRVARPWIITMGHRPMYCSNADLDDCTRHESRVRKGLHGKLFGLED 319
Query: 523 LLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAG 582
L K VDL + H H+YER ++ + NG ++N PVH I G AG
Sbjct: 320 LFHKYGVDLEFWAHEHSYERLWPIYNYQVF-------NGSLESPYTNPRGPVHIITGSAG 372
Query: 583 FS--LDKFNKNNATWSLSRVAKFGYLRGH---ATKQEIQLEFVNADTRKVED 629
L F + WS RV ++GY R H T IQ + D + V+D
Sbjct: 373 CEELLTPFVRKPRPWSAVRVKEYGYTRMHILNGTHMHIQQVSDDQDGKIVDD 424
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q6ZNF0|PAPL_HUMAN Iron/zinc purple acid phosphatase-like protein OS=Homo sapiens GN=PAPL PE=2 SV=2 | Back alignment and function description |
|---|
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 155/375 (41%), Gaps = 72/375 (19%)
Query: 285 YIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDAS 344
YIH + L P YR GS A WS + +FR G + +GD+G A
Sbjct: 92 YIHRVTLRKLLPGVQYVYRCGS-AQGWSRRFRFRALKNGAHWSPRLAVFGDLGADNPKA- 149
Query: 345 TEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISY-------ATGFLVEWDFFLHQITP 397
V + + G D+V H+GD +Y G D F+ I P
Sbjct: 150 ------------VPRLRRDTQQGMYDAVLHVGDFAYNLDQDNARVG-----DRFMRLIEP 192
Query: 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQAS 457
VA+ + YMT GNHE Y S Y+ F MP ++ WYS +
Sbjct: 193 VAASLPYMTCPGNHEERYNFSN---------------YKARFSMPGDNEGL-WYSWDLGP 236
Query: 458 VHFTVISTEHDWWLN------SEQYKWIQKDL--ASVDRSKTPWLIFAGHRPMYSS---L 506
H STE ++L+ Q++W++ DL A+ +R+ PW+I GHRPMY S L
Sbjct: 237 AHIISFSTEVYFFLHYGRHLVQRQFRWLESDLQKANKNRAARPWIITMGHRPMYCSNADL 296
Query: 507 DGFLSVDKFFVK-------SVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDD 559
D + K +E L K VDL L+ H H+YER ++ +
Sbjct: 297 DDCTRHESKVRKGLQGKLYGLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVF------- 349
Query: 560 NGIDTYDHSNYTAPVHAIIGMAGFS--LDKFNKNNATWSLSRVAKFGYLRGH---ATKQE 614
NG ++N PVH I G AG L F WS RV ++GY R H T
Sbjct: 350 NGSREMPYTNPRGPVHIITGSAGCEERLTPFAVFPRPWSAVRVKEYGYTRLHILNGTHIH 409
Query: 615 IQLEFVNADTRKVED 629
IQ + D + V+D
Sbjct: 410 IQQVSDDQDGKIVDD 424
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 173/387 (44%), Gaps = 70/387 (18%)
Query: 231 MRLTWVSGDKEPQQV-EYGD-----DGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPG 284
MR+T+++ D + + V EYG DGK T E +++ + ++ G
Sbjct: 60 MRVTFITEDNKVESVVEYGKQPGKYDGKA-TGECTSYK---------------YFFYKSG 103
Query: 285 YIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDAS 344
IH + LQ ++T YR G ++S F+TPP+ + ++F GD+G+ A+
Sbjct: 104 KIHHVKIGPLQANTTYYYRCGGNGPEFS----FKTPPS--TFPVEFAIVGDLGQTEWTAA 157
Query: 345 TEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404
T +I N+ + D GD+SYA WD F + P+AS+ +
Sbjct: 158 TLSHI---------------NSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPW 202
Query: 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVIS 464
M GNHE ++ + +P+ F S +YS + A VH ++
Sbjct: 203 MVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESF-----STSNLYYSFDVAGVHTVMLG 257
Query: 465 TEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLL 524
+ D+ S+QY+W+Q DLA VDR TPW++ H P Y++ + + +++E LL
Sbjct: 258 SYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLL 317
Query: 525 LKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIG----M 580
+VD+V GHVH YER V+ NK ++ P+H IG
Sbjct: 318 FNARVDVVFSGHVHAYERFKRVYNNK-----------------ADPCGPIHITIGDGGNR 360
Query: 581 AGFSLDKFNKNNATWSLSRVAKFGYLR 607
G +L F K + S R + FG+ R
Sbjct: 361 EGLAL-SFKKPPSPLSEFRESSFGHGR 386
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 639 | ||||||
| 296081295 | 1306 | unnamed protein product [Vitis vinifera] | 0.968 | 0.473 | 0.700 | 0.0 | |
| 359495063 | 639 | PREDICTED: probable inactive purple acid | 0.967 | 0.967 | 0.700 | 0.0 | |
| 356529842 | 640 | PREDICTED: probable inactive purple acid | 0.971 | 0.970 | 0.684 | 0.0 | |
| 255544093 | 639 | Nucleotide pyrophosphatase/phosphodieste | 0.935 | 0.935 | 0.709 | 0.0 | |
| 356544306 | 635 | PREDICTED: probable inactive purple acid | 0.974 | 0.981 | 0.683 | 0.0 | |
| 224075810 | 623 | predicted protein [Populus trichocarpa] | 0.962 | 0.987 | 0.681 | 0.0 | |
| 357470893 | 611 | Nucleotide pyrophosphatase/phosphodieste | 0.945 | 0.988 | 0.700 | 0.0 | |
| 147784700 | 650 | hypothetical protein VITISV_026818 [Viti | 0.984 | 0.967 | 0.650 | 0.0 | |
| 225449885 | 652 | PREDICTED: probable inactive purple acid | 0.940 | 0.921 | 0.665 | 0.0 | |
| 449445160 | 647 | PREDICTED: probable inactive purple acid | 0.945 | 0.933 | 0.654 | 0.0 |
| >gi|296081295|emb|CBI17739.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/624 (70%), Positives = 533/624 (85%), Gaps = 5/624 (0%)
Query: 15 MLILCVCLFFGFSSSLSFLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFLNIS 74
+ + V L F S SF P ++S E +N+TAIS+FR+LNR+ L +CP NP+L I+
Sbjct: 675 LFLAAVLLSFPGPCSSSFSPPITISSIDEFQNYTAISDFRILNRRVLVECPDANPYLQIN 734
Query: 75 VSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPL 134
VSK+S LSDEE++TVTV+GVL P+ DWVAMISP+HSDVSSCP I Y QTGD+SNLPL
Sbjct: 735 VSKTSSLSDEEYLTVTVSGVLLPAETDWVAMISPSHSDVSSCPLAAIFYIQTGDISNLPL 794
Query: 135 LCHYPVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAG 194
LCHYPVKAQF+SNDPDYLSCKK+ECKK NGKC TC GS+ FH INIRTDIEFVFFAG
Sbjct: 795 LCHYPVKAQFVSNDPDYLSCKKQECKKYENGKCVAVTCAGSLTFHAINIRTDIEFVFFAG 854
Query: 195 GFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQ 254
GF TPCIL+R+ PV+FA+P+KPLYGH+SS+DSTGTSMRLTWVSGDKEPQQV+Y +GK++
Sbjct: 855 GFQTPCILTRSNPVSFASPEKPLYGHISSIDSTGTSMRLTWVSGDKEPQQVQY--EGKSE 912
Query: 255 TSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDK 314
SEV TFTQ +MC + SPAKDFGWH+PGYIH+AVMTGLQPSST SY+YGS++V WSD+
Sbjct: 913 ESEVVTFTQGDMCGTEKTSPAKDFGWHDPGYIHSAVMTGLQPSSTFSYKYGSDSVGWSDQ 972
Query: 315 IQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFH 374
IQFRTPPAGGSDE++F+A+GDMGKAPRDAS EHYIQPGS+SV++A++ E+++GN+DS+FH
Sbjct: 973 IQFRTPPAGGSDELRFIAFGDMGKAPRDASAEHYIQPGSISVIEAVAKELSSGNIDSIFH 1032
Query: 375 IGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIP 434
IGDISYATGFLVEWDFFLH I PVAS+VSYMTAIGNHE DY ++ S+Y TPDSGGECG+P
Sbjct: 1033 IGDISYATGFLVEWDFFLHLINPVASQVSYMTAIGNHEMDYPDAESIYKTPDSGGECGVP 1092
Query: 435 YETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWL 494
Y TYFPMPT K++PWYSIEQ SVHFT+ISTEHDW ++EQY+W++ D+ASVDRSKTPWL
Sbjct: 1093 YWTYFPMPTVQKEKPWYSIEQGSVHFTIISTEHDWAESAEQYEWMKNDMASVDRSKTPWL 1152
Query: 495 IFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGI 554
IF GHR MY+S S D F+ +VEPLLL NKVDLVLFGHVHNYERTC+++ ++C G+
Sbjct: 1153 IFIGHRHMYTSTTSLGSSD--FISAVEPLLLANKVDLVLFGHVHNYERTCAIYDHECKGM 1210
Query: 555 PTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKF-NKNNATWSLSRVAKFGYLRGHATKQ 613
P KD++GIDTYD+SNYTAPV A+IGMAGFSLDKF + ++ WSLSR++++GY+RGHAT +
Sbjct: 1211 PKKDEDGIDTYDNSNYTAPVQAVIGMAGFSLDKFPDDDDNAWSLSRISEYGYVRGHATWE 1270
Query: 614 EIQLEFVNADTRKVEDSFRIIRRQ 637
E+++EFV ++TRKV DSFRIIR Q
Sbjct: 1271 ELKMEFVESNTRKVGDSFRIIRSQ 1294
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495063|ref|XP_002267993.2| PREDICTED: probable inactive purple acid phosphatase 27-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/624 (70%), Positives = 533/624 (85%), Gaps = 6/624 (0%)
Query: 15 MLILCVCLFFGFSSSLSFLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFLNIS 74
+ + V L F S SF P ++S E +N+TAIS+FR+LNR+ L +CP NP+L I+
Sbjct: 19 LFLAAVLLSFPGPCSSSFSPPITISSIDEFQNYTAISDFRILNRRVLVECPDANPYLQIN 78
Query: 75 VSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPL 134
VSK+S LSDEE++TVTV+GVL P+ DWVAMISP+HSDVSSCP I Y QTGD+SNLPL
Sbjct: 79 VSKTSSLSDEEYLTVTVSGVLLPAETDWVAMISPSHSDVSSCPLAAIFYIQTGDISNLPL 138
Query: 135 LCHYPVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAG 194
LCHYPVKAQF+SNDPDYLSCKK+ECKK NGKC TC GS+ FH INIRTDIEFVFFAG
Sbjct: 139 LCHYPVKAQFVSNDPDYLSCKKQECKKYENGKCVAVTCAGSLTFHAINIRTDIEFVFFAG 198
Query: 195 GFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQ 254
GF TPCIL+R+ PV+FA+P+KPLYGH+SS+DSTGTSMRLTWVSGDKEPQQV+Y +GK++
Sbjct: 199 GFQTPCILTRSNPVSFASPEKPLYGHISSIDSTGTSMRLTWVSGDKEPQQVQY--EGKSE 256
Query: 255 TSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDK 314
SEV TFTQ +MC+ SPAKDFGWH+PGYIH+AVMTGLQPSST SY+YGS++V WSD+
Sbjct: 257 ESEVVTFTQGDMCTEKT-SPAKDFGWHDPGYIHSAVMTGLQPSSTFSYKYGSDSVGWSDQ 315
Query: 315 IQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFH 374
IQFRTPPAGGSDE++F+A+GDMGKAPRDAS EHYIQPGS+SV++A++ E+++GN+DS+FH
Sbjct: 316 IQFRTPPAGGSDELRFIAFGDMGKAPRDASAEHYIQPGSISVIEAVAKELSSGNIDSIFH 375
Query: 375 IGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIP 434
IGDISYATGFLVEWDFFLH I PVAS+VSYMTAIGNHE DY ++ S+Y TPDSGGECG+P
Sbjct: 376 IGDISYATGFLVEWDFFLHLINPVASQVSYMTAIGNHEMDYPDAESIYKTPDSGGECGVP 435
Query: 435 YETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWL 494
Y TYFPMPT K++PWYSIEQ SVHFT+ISTEHDW ++EQY+W++ D+ASVDRSKTPWL
Sbjct: 436 YWTYFPMPTVQKEKPWYSIEQGSVHFTIISTEHDWAESAEQYEWMKNDMASVDRSKTPWL 495
Query: 495 IFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGI 554
IF GHR MY+S S D F+ +VEPLLL NKVDLVLFGHVHNYERTC+++ ++C G+
Sbjct: 496 IFIGHRHMYTSTTSLGSSD--FISAVEPLLLANKVDLVLFGHVHNYERTCAIYDHECKGM 553
Query: 555 PTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKF-NKNNATWSLSRVAKFGYLRGHATKQ 613
P KD++GIDTYD+SNYTAPV A+IGMAGFSLDKF + ++ WSLSR++++GY+RGHAT +
Sbjct: 554 PKKDEDGIDTYDNSNYTAPVQAVIGMAGFSLDKFPDDDDNAWSLSRISEYGYVRGHATWE 613
Query: 614 EIQLEFVNADTRKVEDSFRIIRRQ 637
E+++EFV ++TRKV DSFRIIR Q
Sbjct: 614 ELKMEFVESNTRKVGDSFRIIRSQ 637
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356529842|ref|XP_003533496.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/624 (68%), Positives = 528/624 (84%), Gaps = 3/624 (0%)
Query: 14 LMLILCVCLFFGFSSSL--SFLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFL 71
++L+L + L S +L S L + N+T+ H N TA+S+FR++NR+ L C NPF+
Sbjct: 18 ILLVLFLSLSCSTSETLTPSLLDFVVTNTTVLHSNFTAVSDFRMINRRILKGCSASNPFV 77
Query: 72 NISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSN 131
++V+ +S SD+EFVTVTVTGV PS DWVAMISP+ SDV +C N + Y QTGD +
Sbjct: 78 KVNVTSNSSFSDDEFVTVTVTGVSSPSAGDWVAMISPSTSDVKNCILNEVYYLQTGDTAK 137
Query: 132 LPLLCHYPVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVF 191
LPLLCHYPVKAQ+M NDP+YLSCKKKECK +NGKC +TC GS+ FHVINIR+DIEFVF
Sbjct: 138 LPLLCHYPVKAQYMKNDPNYLSCKKKECKTFQNGKCDVSTCSGSLQFHVINIRSDIEFVF 197
Query: 192 FAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDG 251
F+GGF PC++ R+ PV+FANPK+PLYGH+SS+DSTGTSMRLTWVSGDKEPQQ++YG+ G
Sbjct: 198 FSGGFVKPCLVGRSTPVSFANPKRPLYGHISSIDSTGTSMRLTWVSGDKEPQQIQYGN-G 256
Query: 252 KTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDW 311
KT TS V+TF+Q++MCSS LPSPAKDFGWH+PGYIH+A+MTGL+PSST SYRYGS +V W
Sbjct: 257 KTVTSAVTTFSQDDMCSSTLPSPAKDFGWHDPGYIHSALMTGLKPSSTFSYRYGSGSVGW 316
Query: 312 SDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDS 371
S++I+F TPPAGGSDE++F+A+GDMGK P DAS EHYIQPG+LSV+KA++++VN+ N++S
Sbjct: 317 SEEIKFSTPPAGGSDELRFIAFGDMGKTPLDASEEHYIQPGALSVIKAIANDVNSNNINS 376
Query: 372 VFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGEC 431
VFHIGDISYATGFL EWD+FLH I PVASR+SYMTAIGNHERDY++SGSVY TPDSGGEC
Sbjct: 377 VFHIGDISYATGFLAEWDYFLHLINPVASRISYMTAIGNHERDYIDSGSVYVTPDSGGEC 436
Query: 432 GIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKT 491
G+PYETYFPMPT +KD+PWYSIEQ SVHFTVISTEH W NSEQY W+QKD+ASV+R KT
Sbjct: 437 GVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHAWSENSEQYVWMQKDMASVNRQKT 496
Query: 492 PWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKC 551
PWLIF GHRPMY++ GF+ + F+K+VEPLLL+NKVDLVLFGHVHNYERTCSVF+N+C
Sbjct: 497 PWLIFMGHRPMYTTNHGFVPSENKFMKAVEPLLLENKVDLVLFGHVHNYERTCSVFQNEC 556
Query: 552 MGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHAT 611
+PTKD NG+DTYD NY+APVHA+IGMAGF+LDKF+ N +WSL R+++FGYLR HAT
Sbjct: 557 KAMPTKDKNGMDTYDGRNYSAPVHAVIGMAGFTLDKFSNNVESWSLKRISEFGYLRAHAT 616
Query: 612 KQEIQLEFVNADTRKVEDSFRIIR 635
+ ++ LEFV +DTR+V+DSF I +
Sbjct: 617 RNDLNLEFVISDTREVKDSFHITK 640
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544093|ref|XP_002513109.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] gi|223548120|gb|EEF49612.1| Nucleotide pyrophosphatase/phosphodiesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/609 (70%), Positives = 514/609 (84%), Gaps = 11/609 (1%)
Query: 37 IVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFLNISVSKSS--------DLSDEEFVT 88
I+NST++HRN+T IS+FRVLNR+ L+ C F NP+L I + S LS+EEFV+
Sbjct: 33 ILNSTIQHRNYTGISSFRVLNRRALTQCSFSNPYLQIKIVTSGNNNNNHNYTLSNEEFVS 92
Query: 89 VTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSND 148
VTV+GVLHPS+ WVAMISP++SDVS CP N I Y QTGDL +LPLLCHYPVKA+++SND
Sbjct: 93 VTVSGVLHPSKDHWVAMISPSNSDVSDCPLNKIQYIQTGDLGDLPLLCHYPVKAEYVSND 152
Query: 149 PDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPV 208
P YLSCKK+ECKK +N KC T+C G+I FHVINIRTDIEFV FAGGF +PCIL+R+ P+
Sbjct: 153 PHYLSCKKQECKKYKNKKCVVTSCSGTIKFHVINIRTDIEFVLFAGGFESPCILARSAPL 212
Query: 209 NFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCS 268
F NP PLYGH+SS+DST TSM++TWVSG KEPQQVEYGDD K S+V+TF+Q++MCS
Sbjct: 213 KFTNPNSPLYGHISSIDSTATSMKVTWVSGSKEPQQVEYGDDKKV-ASQVTTFSQKDMCS 271
Query: 269 SALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEM 328
S LPSPAKDFGWH+PGYIH+AVMTGL+PSS +YRYGS V WS + QFRTPPAGG++E+
Sbjct: 272 SVLPSPAKDFGWHDPGYIHSAVMTGLKPSSNYTYRYGSALVGWSSQTQFRTPPAGGANEV 331
Query: 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW 388
+FLA+GDMGKAPRDAS EHYIQPGS+SVV+AM++EV +G+VDS+FHIGDISYATGFLVEW
Sbjct: 332 RFLAFGDMGKAPRDASAEHYIQPGSISVVEAMAEEVKSGSVDSIFHIGDISYATGFLVEW 391
Query: 389 DFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDR 448
DFFLHQITP+ASRVSYMTAIGNHERDY+ +G+VY TPDSGGECG+ YETYFPMPT +KD+
Sbjct: 392 DFFLHQITPLASRVSYMTAIGNHERDYIGTGAVYGTPDSGGECGVAYETYFPMPTSAKDK 451
Query: 449 PWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDG 508
PWYSIEQ SVHF V+STEHDW SEQY+W++KD+ASVDR +TPWL+F GHRPMYSS
Sbjct: 452 PWYSIEQGSVHFVVMSTEHDWSPGSEQYQWMRKDMASVDRWRTPWLVFTGHRPMYSS--D 509
Query: 509 FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHS 568
LSVD F VEPLLL+ KVDLVLFGHVHN+ER+CSV+R KC+ +PTKD NGIDTYDHS
Sbjct: 510 LLSVDGKFAGFVEPLLLEYKVDLVLFGHVHNFERSCSVYRAKCLAMPTKDANGIDTYDHS 569
Query: 569 NYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVE 628
NY APV A+IGMAGFSLD F WSL R++KFG+ R HATK E++LEFVN+ TR+VE
Sbjct: 570 NYKAPVQAVIGMAGFSLDNFPAFVPNWSLKRISKFGFSRVHATKAELKLEFVNSHTRQVE 629
Query: 629 DSFRIIRRQ 637
DSFRIIR+Q
Sbjct: 630 DSFRIIRKQ 638
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544306|ref|XP_003540594.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/626 (68%), Positives = 529/626 (84%), Gaps = 3/626 (0%)
Query: 12 SKLMLILCVCLFFGFSSSL--SFLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNP 69
+ ++L+ + L S +L S L + N+T+ H N T +S FR++NR+ L DC NP
Sbjct: 11 ASILLVFFLSLGCSTSETLTRSLLDFVVTNTTVLHSNFTLVSEFRMINRRILKDCSASNP 70
Query: 70 FLNISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDL 129
F+ ++V+ +S LSD+EFVTVTVTGV +PS DWVAMISP+ SDV +C N Y QTGD
Sbjct: 71 FVKVNVTSNSSLSDDEFVTVTVTGVSNPSVSDWVAMISPSTSDVKTCILNEAFYLQTGDT 130
Query: 130 SNLPLLCHYPVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEF 189
+ LPLLCHYPVKAQ+M NDP+YLSCKKKECK +NGKC +TC GS+ FHV+NIR+DIEF
Sbjct: 131 AKLPLLCHYPVKAQYMKNDPNYLSCKKKECKTFQNGKCAVSTCSGSLQFHVVNIRSDIEF 190
Query: 190 VFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGD 249
VFF+GGF PC++ R+ PV+FANPK+PLYGHLSS+DSTGTSMRLTWVSGDKEPQQ++YG+
Sbjct: 191 VFFSGGFVEPCLVGRSTPVSFANPKRPLYGHLSSIDSTGTSMRLTWVSGDKEPQQIQYGN 250
Query: 250 DGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAV 309
GKT S V+TF+Q++MCSSALPSPAKDFGWH+PGYIH+A+MTGL+PSST SYRYGS V
Sbjct: 251 -GKTVASAVTTFSQDDMCSSALPSPAKDFGWHDPGYIHSALMTGLKPSSTFSYRYGSGWV 309
Query: 310 DWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV 369
WS++I+F TPPAGGSDE++F+A+GDMGK P DAS EHYIQPG+LSV+KA++++VN+ NV
Sbjct: 310 GWSEQIKFSTPPAGGSDELRFIAFGDMGKTPLDASEEHYIQPGALSVIKAIANDVNSNNV 369
Query: 370 DSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGG 429
+SVFHIGDISYATGFL EWD+FLH I PVASR+SYMTAIGNHERDY++SGSVY TPDSGG
Sbjct: 370 NSVFHIGDISYATGFLAEWDYFLHLINPVASRISYMTAIGNHERDYIDSGSVYVTPDSGG 429
Query: 430 ECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRS 489
ECG+PYETYFPMPT +KD+PWYSIEQ SVHFTVISTEHDW NSEQY+W+QKD+ASV+R
Sbjct: 430 ECGVPYETYFPMPTSAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYEWVQKDMASVNRQ 489
Query: 490 KTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRN 549
KTPWLIF GHRPMY++ GFL + F+++VEPLLL+NKVDLVLFGHVHNYERTCS+F+N
Sbjct: 490 KTPWLIFMGHRPMYTTNHGFLPSENKFMEAVEPLLLENKVDLVLFGHVHNYERTCSLFQN 549
Query: 550 KCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGH 609
+C +P KD NG+DTYD NY+APVHA+IGMAGF+LDKF+ N +WSL R+++FGYLR H
Sbjct: 550 ECKAMPAKDKNGVDTYDGRNYSAPVHAVIGMAGFTLDKFSSNVKSWSLKRISEFGYLRAH 609
Query: 610 ATKQEIQLEFVNADTRKVEDSFRIIR 635
AT+ ++ LEFV +DTR+V+DSFRI +
Sbjct: 610 ATRNDLNLEFVISDTREVKDSFRITK 635
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224075810|ref|XP_002304778.1| predicted protein [Populus trichocarpa] gi|222842210|gb|EEE79757.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/634 (68%), Positives = 515/634 (81%), Gaps = 19/634 (2%)
Query: 8 SSPVSKLMLILCVCLFFGFS--SSLSFLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCP 65
SS S L+++ + F SS L P+++ S + H+N+TAIS+FRVLNR+ L C
Sbjct: 3 SSATSSLIILNVFTILLAFIPFSSSYLLPPSVLGSAIVHQNYTAISSFRVLNRRGLIQCR 62
Query: 66 FRNPFLNISVSKSSDL-SDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYA 124
NP+L I+VS + L SD E+V VTV+GV PS DWVAMISP+ SDV SCP Y
Sbjct: 63 HPNPYLRINVSSENGLLSDNEYVNVTVSGVFLPSDDDWVAMISPSDSDVKSCPLKKSRYV 122
Query: 125 QTGDLSNLPLLCHYPVKAQFMSNDPDYLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIR 184
QTGDLS LPLLCHYPVKAQ+MSNDPDYL C K+ECKK N C+ + C G+I FHVINIR
Sbjct: 123 QTGDLSKLPLLCHYPVKAQYMSNDPDYLKCTKQECKKYNNTNCEVSACSGTISFHVINIR 182
Query: 185 TDIEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQ 244
TDIEFVFF+GGF TPCIL+R+ P+ F+NP +PL+GH+SS+DST TSMRLTWVSG +E QQ
Sbjct: 183 TDIEFVFFSGGFETPCILTRSGPMKFSNPNQPLHGHISSIDSTATSMRLTWVSGGEETQQ 242
Query: 245 VEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRY 304
V+YGD G+T TS TF+Q++MC+S LPSPA DFGWH+PGYIH+AVMTGL+PS+T SYRY
Sbjct: 243 VQYGD-GETLTSTAKTFSQDDMCTSVLPSPANDFGWHDPGYIHSAVMTGLRPSTTYSYRY 301
Query: 305 GSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEV 364
GS++V WSDKIQFRTPPAGGSDE+KFLA+GDMGKAP D S EHYIQ V
Sbjct: 302 GSDSVGWSDKIQFRTPPAGGSDELKFLAFGDMGKAPLDPSVEHYIQ-------------V 348
Query: 365 NNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYST 424
+GNVDS+FHIGDISYATGFLVEWDFFLH I+P+AS+VSYMTAIGNHERDY+ SGSVY T
Sbjct: 349 KSGNVDSIFHIGDISYATGFLVEWDFFLHLISPMASQVSYMTAIGNHERDYIGSGSVYIT 408
Query: 425 PDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484
PDSGGECG+PYETYFPMPTP+KD+PWYSIEQ S+HFTVISTEHDW NSEQY+W+ KD+
Sbjct: 409 PDSGGECGVPYETYFPMPTPAKDKPWYSIEQGSIHFTVISTEHDWTENSEQYEWMTKDMG 468
Query: 485 SVDRSKTPWLIFAGHRPMY-SSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543
SVDRSKTPWLIF GHRPMY SS + +VD F K+VEPLLL++KVDL FGHVHNYERT
Sbjct: 469 SVDRSKTPWLIFTGHRPMYSSSTNRLFNVDDRFSKAVEPLLLQHKVDLAFFGHVHNYERT 528
Query: 544 CSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKF 603
CSV+++ C+ +PTKD NGIDTYDHSNY+APV A+IGMAGFSL KF+K +WSL+R++ F
Sbjct: 529 CSVYQSNCLAMPTKDRNGIDTYDHSNYSAPVQAVIGMAGFSLTKFSK-PGSWSLTRISDF 587
Query: 604 GYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637
GYLRGHATK++I LEFVNA+TR+V+DSFRI +RQ
Sbjct: 588 GYLRGHATKEDINLEFVNANTRQVQDSFRITKRQ 621
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357470893|ref|XP_003605731.1| Nucleotide pyrophosphatase/phosphodiesterase [Medicago truncatula] gi|355506786|gb|AES87928.1| Nucleotide pyrophosphatase/phosphodiesterase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/605 (70%), Positives = 518/605 (85%), Gaps = 1/605 (0%)
Query: 31 SFLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFLNISVSKSSDLSDEEFVTVT 90
S L + ++ H+N TA+S+FR++NR+ L+DC +P+L ++++ +S L DEEFVTVT
Sbjct: 8 STLDLTVTHTKALHQNFTALSDFRLINRRILNDCSHLSPYLKLNITSNSKLLDEEFVTVT 67
Query: 91 VTGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSNDPD 150
VTGV P DWVAMISP++S+V +C N Y QTGD + LPLLCHYPVKAQ++ NDPD
Sbjct: 68 VTGVSKPRDGDWVAMISPSNSNVKACLLNEFYYLQTGDTAKLPLLCHYPVKAQYLKNDPD 127
Query: 151 YLSCKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPVNF 210
Y+SCKKKECKK +NGKC TTC GSI FHVINIR+DIEFVFF GGF TPC++ R+ P++F
Sbjct: 128 YMSCKKKECKKEQNGKCSVTTCSGSIKFHVINIRSDIEFVFFTGGFLTPCLVGRSTPLSF 187
Query: 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSA 270
ANPKKPLYGH+SS+DST TSMRLTWVSGDKEPQQ++YG+ GKT TS V+TF+QE+MCSS
Sbjct: 188 ANPKKPLYGHISSIDSTATSMRLTWVSGDKEPQQIQYGN-GKTVTSAVTTFSQEDMCSSV 246
Query: 271 LPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKF 330
+PSPAKDFGWH+PGYIH+A+MTGL+PSS SYRYGS + DWS++ +F TPPAGGSDE+KF
Sbjct: 247 VPSPAKDFGWHDPGYIHSALMTGLKPSSAYSYRYGSNSADWSEQTKFSTPPAGGSDELKF 306
Query: 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDF 390
+++GDMGK P DAS EHYIQPG+LSV+KA+++EVN+ NV+SVFHIGDISYATGFL EWDF
Sbjct: 307 ISFGDMGKTPLDASEEHYIQPGALSVIKAIANEVNSNNVNSVFHIGDISYATGFLAEWDF 366
Query: 391 FLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPW 450
FL+ I+PVASRVSYMTAIGNHERDY++SGSVY TPDSGGECG+PYETYFPMPT +KD+PW
Sbjct: 367 FLNLISPVASRVSYMTAIGNHERDYIDSGSVYVTPDSGGECGVPYETYFPMPTAAKDKPW 426
Query: 451 YSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL 510
YSIEQ SVHFTVISTEHDW NSEQY WI+KDLASV+R TPWLIF GHRPMY+S +GF
Sbjct: 427 YSIEQGSVHFTVISTEHDWSENSEQYNWIKKDLASVNRQHTPWLIFMGHRPMYTSNNGFS 486
Query: 511 SVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNY 570
S D+ F+ +VEPLLL+NKVDLVLFGHVHNYERTCSV++NKC IP KD G+DTYD+ NY
Sbjct: 487 SKDQKFINAVEPLLLQNKVDLVLFGHVHNYERTCSVYQNKCKAIPIKDQKGVDTYDNRNY 546
Query: 571 TAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDS 630
+APVHA+IGMAGF+LDKF+ N +WSL R+++FGYLR HAT+ ++ LEFV +DTR+V+DS
Sbjct: 547 SAPVHAVIGMAGFALDKFSNNAESWSLKRISEFGYLRAHATRNDLSLEFVTSDTREVKDS 606
Query: 631 FRIIR 635
FRI +
Sbjct: 607 FRITK 611
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147784700|emb|CAN63695.1| hypothetical protein VITISV_026818 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/636 (65%), Positives = 509/636 (80%), Gaps = 7/636 (1%)
Query: 5 PSISSPVSKLMLILCVCLFFGFSSSLS--FLSPAIVNSTLEHRNHTAISNFRVLNRKYLS 62
P +SS V L L + LFF S S S FL P +S +NHTAIS+FR+LNR+ L
Sbjct: 3 PFLSSWVFGLFLFDALILFFPISCSSSSSFLPPLTASSIDXLQNHTAISDFRLLNRRILK 62
Query: 63 DCPFRNPFLNISVSKSSDLSDEEFVTVTVTGVLHPSRHDWVAMISPAHSDVSSCPFNGIL 122
+C NP+L I+VSK+S L+DEE++TVTV+GVL P DWVAM+SP+ SD+S CP +
Sbjct: 63 ECXNPNPYLEITVSKNSSLADEEYLTVTVSGVLIPEXTDWVAMVSPSDSDLSGCPLSKFY 122
Query: 123 YAQTGDLSNLPLLCHYPVKAQFMSNDPDYLSCKKKECKK-RRNGKCKFTTCGGSIIFHVI 181
Y QTGD S+LPLLCHYPVKAQF+S+DP YL+C KKEC+ +G C TC S+ FHV+
Sbjct: 123 YIQTGDFSSLPLLCHYPVKAQFVSHDPGYLNCTKKECQAYDDDGTCLVNTCSASLTFHVV 182
Query: 182 NIRTDIEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE 241
NIRTDIEFVFFAG F PCI +R+ PV+FANPK PLYGHLSS+DSTGTSMRLTWVSGDKE
Sbjct: 183 NIRTDIEFVFFAGAFDRPCIXTRSIPVSFANPKMPLYGHLSSIDSTGTSMRLTWVSGDKE 242
Query: 242 PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVS 301
PQ V+Y +GK++ SEV+TFT+E+MC SA +PAKDFGWH+PGYIH+A+MTGLQPS S
Sbjct: 243 PQLVQY--EGKSEQSEVTTFTREDMCGSAKITPAKDFGWHDPGYIHSAMMTGLQPSRNFS 300
Query: 302 YRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMS 361
YRYG ++V WS QFRTPPAGGSDE++F+A+GDMGK+PRD STEH+IQPGS+SV++ ++
Sbjct: 301 YRYGCDSVGWSKLTQFRTPPAGGSDELRFIAFGDMGKSPRDNSTEHFIQPGSISVIEEIA 360
Query: 362 DEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSV 421
EV++GNVDS+FHIGDISYATGFLVEWDFFL+ I PVAS+VSYMTAIGNHE DY S S+
Sbjct: 361 KEVSSGNVDSIFHIGDISYATGFLVEWDFFLNLINPVASQVSYMTAIGNHEMDYPGSVSI 420
Query: 422 YSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQK 481
+ TPDSGGECGIPY TYFPMPT K +PWYSIEQ SVHFT+ISTEHD +SEQY+W+++
Sbjct: 421 HHTPDSGGECGIPYWTYFPMPTMEKQKPWYSIEQGSVHFTIISTEHDCSEDSEQYEWLKE 480
Query: 482 DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKF-FVKSVEPLLLKNKVDLVLFGHVHNY 540
D+ASV+RS+TPWLI GHR MY+SL LS F FV +VEPLLL NKVDLVL GHVHNY
Sbjct: 481 DMASVNRSRTPWLIVMGHRHMYTSLKSGLSRPDFMFVSAVEPLLLANKVDLVLVGHVHNY 540
Query: 541 ERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKN-NATWSLSR 599
ERTC+++ N+C+ +P KD +G YD+SNYTAPV A+IGMAGFSLDKF N WSLSR
Sbjct: 541 ERTCAIYNNECLAMPGKDWSGTAVYDNSNYTAPVQAVIGMAGFSLDKFPANIENNWSLSR 600
Query: 600 VAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIR 635
++++GY+RGHAT++E+++EFV + V DSFRII+
Sbjct: 601 ISEYGYVRGHATREELRMEFVESKXGTVGDSFRIIK 636
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449885|ref|XP_002267949.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/606 (66%), Positives = 499/606 (82%), Gaps = 5/606 (0%)
Query: 32 FLSPAIVNSTLEHRNHTAISNFRVLNRKYLSDCPFRNPFLNISVSKSSDLSDEEFVTVTV 91
FL P +S + +NHTAIS+FR+LNR+ L +CP NP+L I+VSK+S L+DEE++TVTV
Sbjct: 36 FLPPLTASSIDDLQNHTAISDFRLLNRRILKECPNPNPYLEITVSKNSSLADEEYLTVTV 95
Query: 92 TGVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSNDPDY 151
+GVL P DWVAM+SP+ SD+S CP + Y QTGD S+LPLLCHYPVKAQF+S+DP Y
Sbjct: 96 SGVLIPEETDWVAMVSPSDSDLSGCPLSKFYYIQTGDFSSLPLLCHYPVKAQFVSHDPGY 155
Query: 152 LSCKKKECKK-RRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPVNF 210
L+C KKEC+ +G C TC S+ FHV+NIRTDIEFVFFAG F PCI +R+ PV+F
Sbjct: 156 LNCTKKECQAYDDDGTCLVNTCSASLTFHVVNIRTDIEFVFFAGAFDRPCIWTRSIPVSF 215
Query: 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSA 270
ANPK PLYGHLSS+DSTGTSMRLTWVSGDKEPQ V+Y +GK++ SEV+TFT+E+MCS+
Sbjct: 216 ANPKMPLYGHLSSIDSTGTSMRLTWVSGDKEPQLVQY--EGKSEQSEVTTFTREDMCSAK 273
Query: 271 LPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKF 330
+ +PAKDFGWH+PGYIH+A+MTGLQPS SYRYG ++V WS QFRTPPAGGSDE++F
Sbjct: 274 I-TPAKDFGWHDPGYIHSAMMTGLQPSRNFSYRYGCDSVGWSKLTQFRTPPAGGSDELRF 332
Query: 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDF 390
+A+GDMGK+PRD STEH+IQPGS+SV++ ++ EV++GNVDS+FHIGDISYATGFLVEWDF
Sbjct: 333 IAFGDMGKSPRDNSTEHFIQPGSISVIEEIAKEVSSGNVDSIFHIGDISYATGFLVEWDF 392
Query: 391 FLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPW 450
FL+ I PVAS+VSYMTAIGNHE DY S S++ TPDSGGECGIPY TYFPMPT K +PW
Sbjct: 393 FLNLINPVASQVSYMTAIGNHEMDYPGSVSIHHTPDSGGECGIPYWTYFPMPTMEKQKPW 452
Query: 451 YSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL 510
YSIEQ SVHFT+ISTEHD +SEQY+W+++D+ASV+RS+TPWLI GHR MY+SL L
Sbjct: 453 YSIEQGSVHFTIISTEHDCSEDSEQYEWLKEDMASVNRSRTPWLIVMGHRHMYTSLKSGL 512
Query: 511 SVDKF-FVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSN 569
S F FV +VEPLLL NKVDLVL GHVHNYERTC+++ N+C+ +P KD +G YD+SN
Sbjct: 513 SRPDFMFVSAVEPLLLANKVDLVLVGHVHNYERTCAIYNNECLAMPGKDWSGTAVYDNSN 572
Query: 570 YTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVED 629
YTAPV A+IGMAGFSLDKF N WSLSR++++GY+RGHAT++E+++EFV + T V D
Sbjct: 573 YTAPVQAVIGMAGFSLDKFPANINNWSLSRISEYGYVRGHATREELRMEFVESKTGTVGD 632
Query: 630 SFRIIR 635
SFRII+
Sbjct: 633 SFRIIK 638
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445160|ref|XP_004140341.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Cucumis sativus] gi|449508855|ref|XP_004163428.1| PREDICTED: probable inactive purple acid phosphatase 27-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/614 (65%), Positives = 495/614 (80%), Gaps = 10/614 (1%)
Query: 35 PAIVNSTLEHRNHTAISNFRVLNRKYLSDCPF-RNPFLNISV-SKSSDLSDEEFVTVTVT 92
P +S HRN+TAIS+FR+LNR+ CP RN F+NI V SKS+ L +EEFV VTV
Sbjct: 33 PLAAHSANLHRNYTAISDFRLLNRRTFFSCPTNRNFFINIDVISKSNSLLNEEFVNVTVG 92
Query: 93 GVLHPSRHDWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSNDPDYL 152
G+ +PS+ W+AMI+P++++V C + ILY QTGDL+ LPLLCHYPVKA ++S+DPDYL
Sbjct: 93 GITNPSKDHWIAMITPSNANVEDCSVSSILYGQTGDLTLLPLLCHYPVKAAYLSSDPDYL 152
Query: 153 SCKKKECKKRRNG-KCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPVNFA 211
CKKK C G KC+ TC ++ FH+IN RTD+EF F GGF TPC+L +++ ++F
Sbjct: 153 PCKKKGCVVPPVGDKCEEPTCIATLSFHIINFRTDVEFFLFDGGFLTPCLLYKSKTLSFQ 212
Query: 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMC-SSA 270
NP PLYGHLSS+DST TSMRL+WVSGD EPQQV+Y +DGK QTS+VSTF+Q +MC +S
Sbjct: 213 NPNAPLYGHLSSIDSTATSMRLSWVSGDGEPQQVQYDEDGKIQTSQVSTFSQNDMCNASF 272
Query: 271 LPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSD-EMK 329
L SPAKDFGWH+PG+IHTA+MT L+PS+T SY+YGSE V WS++ FRTPPA G + +
Sbjct: 273 LQSPAKDFGWHDPGFIHTAIMTQLKPSTTYSYKYGSEKVGWSEETTFRTPPAAGDETDFS 332
Query: 330 FLAYGDMGKAPRDAST-EHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW 388
F+A+GDMGKAP D+S+ EHYIQPGS+SVV+AM +EV G +D VFHIGDISYATGFLVEW
Sbjct: 333 FIAFGDMGKAPLDSSSAEHYIQPGSISVVEAMKEEVERGEIDGVFHIGDISYATGFLVEW 392
Query: 389 DFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDR 448
DFFLH I P+ASR+ YMTAIGNHERDY+ S SVY+ PDSGGECG+PYETY MP KD+
Sbjct: 393 DFFLHLINPIASRLPYMTAIGNHERDYLQSTSVYTFPDSGGECGVPYETYLQMPISGKDQ 452
Query: 449 PWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDG 508
PWYSIE AS+HFT+ISTEHD+ +NS QY+W++ D+ASVDRS+TPWLIFAGHRPMYSS+ G
Sbjct: 453 PWYSIEMASIHFTIISTEHDFTINSPQYEWMKNDMASVDRSRTPWLIFAGHRPMYSSISG 512
Query: 509 FL---SVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTY 565
L SVD FV +VEPLLL+NKVDLVLFGHVH+YERTCS+F + C G+P KD NGIDTY
Sbjct: 513 SLLIPSVDPSFVAAVEPLLLQNKVDLVLFGHVHSYERTCSIFNSICKGMPLKDINGIDTY 572
Query: 566 DHSNYTAPVHAIIGMAGFSLDKFN-KNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADT 624
DH+NYTAP+HA+IGMAGF+LD+F +WSLSRV+KFGYLRGHATK+++ E VNA T
Sbjct: 573 DHNNYTAPLHAVIGMAGFTLDQFPLLGIESWSLSRVSKFGYLRGHATKEKLSFEMVNAIT 632
Query: 625 RKVEDSFRIIRRQI 638
R+VEDSF II+ QI
Sbjct: 633 REVEDSFNIIKAQI 646
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 639 | ||||||
| TAIR|locus:2177547 | 611 | PAP27 "purple acid phosphatase | 0.793 | 0.829 | 0.360 | 4.1e-100 | |
| TAIR|locus:2117353 | 615 | PAP24 "purple acid phosphatase | 0.760 | 0.790 | 0.351 | 1.1e-91 | |
| TAIR|locus:2023870 | 613 | AT1G13750 [Arabidopsis thalian | 0.827 | 0.862 | 0.357 | 1.9e-83 | |
| DICTYBASE|DDB_G0281861 | 594 | DDB_G0281861 [Dictyostelium di | 0.413 | 0.444 | 0.409 | 6.1e-73 | |
| TAIR|locus:2063777 | 651 | PAP9 "purple acid phosphatase | 0.375 | 0.368 | 0.347 | 1.7e-56 | |
| TAIR|locus:2014839 | 656 | PAP2 "AT1G13900" [Arabidopsis | 0.558 | 0.544 | 0.321 | 1.6e-49 | |
| DICTYBASE|DDB_G0282559 | 431 | dduA "N-terminal purple acid p | 0.586 | 0.870 | 0.275 | 1.1e-30 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.341 | 0.498 | 0.326 | 6.7e-26 | |
| UNIPROTKB|F1MUZ7 | 438 | LOC790415 "Uncharacterized pro | 0.488 | 0.712 | 0.297 | 1.5e-25 | |
| DICTYBASE|DDB_G0293460 | 424 | DDB_G0293460 [Dictyostelium di | 0.563 | 0.849 | 0.290 | 1.5e-25 |
| TAIR|locus:2177547 PAP27 "purple acid phosphatase 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 892 (319.1 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 204/566 (36%), Positives = 295/566 (52%)
Query: 101 DWVAMI----SPAHSD----VSSCPFNGILYAQTGDLSNLPLLCHYPVKAQFMSNDPDYL 152
+WV ++ P+ D S F+ A T D P +C PVK + + PDY+
Sbjct: 62 EWVNVVISNPEPSSDDWVGVFSPAKFDSSSCAPTDDKEIAPFICSAPVKYMYAKSSPDYM 121
Query: 153 SXXXXXXXXXXXXXXXFTTCGGSII-FHVINIRTDIEFVFFAGGFATPCILSRTQPVNFA 211
G +++ F +IN R D F F GG + P ++S + V+F
Sbjct: 122 KT------------------GNAVLKFMLINQRADFSFALFTGGLSNPTLVSVSNHVSFI 163
Query: 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEY------GDDGKTQTSEVSTFTQEN 265
NPK P+Y L+ + M +TW SG + V + G + + TFT+ +
Sbjct: 164 NPKAPVYPRLA-LGKKWDEMTVTWTSGYNIGEAVPFVEWSRKGTRSRRSPAGTLTFTRNS 222
Query: 266 MCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVD----WSDKIQFRTPP 321
MC + PA+ GW +PG+IHTA + L P+ +YR G E ++ WS F++ P
Sbjct: 223 MCGA----PARTVGWRDPGFIHTASLKDLWPNLKYTYRMGHELMNGSIVWSKNFTFKSSP 278
Query: 322 AGGSDEM-KFLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDIS 379
G D + + + +GDMGK RD S E+ QPGSL+ + ++ N +D VFHIGDI+
Sbjct: 279 YPGQDSLQRVIIFGDMGKGERDGSNEYNDYQPGSLNTTDQLIKDLKN--IDIVFHIGDIT 336
Query: 380 YATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYF 439
YA G++ +WD F Q+ P+AS V YM A GNHERD+ +SGS Y DSGGECG+P ET F
Sbjct: 337 YANGYISQWDQFTAQVEPIASTVPYMVASGNHERDWPDSGSFYGGKDSGGECGVPAETMF 396
Query: 440 PMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGH 499
P +K + WYS + F V TEHDW SEQY++I++ LASVDR PWLIF H
Sbjct: 397 DFPAENKAKFWYSADYGMFRFCVADTEHDWREGSEQYQFIERCLASVDRRAQPWLIFIAH 456
Query: 500 RPM-YSSLDGFLSVDKFFV----KSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGI 554
R + YS+ D + F +S++ L K KVD+ +GHVHNYERTC +++N+CM
Sbjct: 457 RVLGYSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPIYQNQCM-- 514
Query: 555 PTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHA-TKQ 613
DN Y + + +H ++G AG L F+ WS+ R +G+++ A
Sbjct: 515 ----DNEKSHYSGA-FKGTIHVVVGGAGSHLSSFSSLKPKWSIFRDYDYGFVKLTAFDHS 569
Query: 614 EIQLEFVNADTRKVEDSFRIIRRQID 639
+ E+ + V DSF I R D
Sbjct: 570 SLLFEYKKSSNGAVHDSFTIFREYRD 595
|
|
| TAIR|locus:2117353 PAP24 "purple acid phosphatase 24" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 836 (299.3 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 188/535 (35%), Positives = 282/535 (52%)
Query: 119 NGILYAQTGDLSNLPLLCHYPVKAQFMSNDPDYLSXXXXXXXXXXXXXXXFTTCGGSIIF 178
+G + +G P +C P+K + ++ PDY+ ++ F
Sbjct: 92 SGNCWPTSGGKEKTPYICSSPIKYMYCNSHPDYMKSGNV-----------------TLKF 134
Query: 179 HVINIRTDIEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSG 238
+IN R D+ F F+ G P +L + PV F NPK P+Y L+ + M +TW SG
Sbjct: 135 QIINQRADVSFALFSNGVQEPHLLGVSNPVAFFNPKAPVYPRLA-LGKNWDEMTVTWTSG 193
Query: 239 ---DKEPQQVEYGDDG---KTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292
D+ +E+ G + + TF + +MC + PA+ GW +PG+ HT+ +
Sbjct: 194 YNIDEAVPFIEWSAKGLPARRSPAGTLTFNRNSMCGN----PARGVGWRDPGFFHTSFLK 249
Query: 293 GLQPSSTVSYRYGSEAVD----WSDKIQFRTPPAGGSD-EMKFLAYGDMGKAPRDASTEH 347
L P+ YR G + V+ WS F + P G D + + + +GDMGK RD S E+
Sbjct: 250 ELWPNREYIYRLGHDLVNGSTIWSKNYTFVSSPYPGQDSKQRVIIFGDMGKGERDGSNEY 309
Query: 348 Y-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406
QPGSL+ + ++ + +D VFHIGD++Y+ G+L +WD F Q+ P+AS V YM
Sbjct: 310 NDYQPGSLNTTDQVIKDLKD--IDIVFHIGDLTYSNGYLSQWDQFTAQVQPIASTVPYMI 367
Query: 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTE 466
A GNHERD+ ++GS Y+ DSGGECG+P ET F P ++ + WY + F V +E
Sbjct: 368 ASGNHERDWPDTGSFYAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSE 427
Query: 467 HDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM-YSSLDGFLSVDKFFV----KSVE 521
HDW +EQYK+I+ LA+VDR PWLIF HR + YS+ D + F +S++
Sbjct: 428 HDWREGTEQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESLQ 487
Query: 522 PLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMA 581
L K KVDL +GHVHNYERTC ++ ++C+ +N D Y + +H ++G A
Sbjct: 488 KLWQKYKVDLAFYGHVHNYERTCPIYESQCV------NNDKDHYS-GTFKGTIHVVVGGA 540
Query: 582 GFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQL-EFVNADTRKVEDSFRIIR 635
G L F+ WSL R FG+++ A+ L E+ + T +V DSF I R
Sbjct: 541 GSHLSPFSSLVPKWSLVRDYDFGFVKLTASDHSSLLFEYKKSSTGQVYDSFNISR 595
|
|
| TAIR|locus:2023870 AT1G13750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 214/599 (35%), Positives = 309/599 (51%)
Query: 69 PFLNISVSKSS-DLSDEEFVTVTVTGVLHPSRHDWVAMI---SPAHSD------VSSCPF 118
P I+V K + L+++ +V + T + +H + ++ SP SD S F
Sbjct: 29 PLSGIAVHKITFGLNEKAYVKASPTVLGSNGQHSELVLVQYSSPKPSDDDWIGVFSPADF 88
Query: 119 NGILYAQTGDLSNLPLLCHYPVKAQFMS-NDPDYLSXXXXXXXXXXXXXXXFTTCGGSII 177
N + P LC PVK Q+ + ++P Y + T GS+
Sbjct: 89 NASTCPGDNKMVQPPRLCSAPVKFQYANFSNPRYTN-----------------TGTGSLK 131
Query: 178 FHVINIRTDIEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVS 237
+IN R+D F F+GG P +++ + V F NP P+Y L+ + M +TW S
Sbjct: 132 LQLINQRSDFSFALFSGGLLNPKLVAISNKVAFENPNAPVYPRLA-LGKEWDEMTVTWTS 190
Query: 238 GD----KEPQQVEYGDDG---KTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290
G EP VE+G G K + TF + +MC + PA+ GW +PGYIHTA
Sbjct: 191 GYGLNLAEPV-VEWGVKGGERKLSPAGTLTFARNSMCGA----PARTVGWRDPGYIHTAF 245
Query: 291 MTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAGGSDEMK-FLAYGDMGKAPRDAST 345
+ L P+S +YR G A+ WS + QF++ P G + ++ + +GDMGKA D S+
Sbjct: 246 LKELWPNSKYTYRVGHRLSNGALIWSKEYQFKSSPFPGQNSVQQVVIFGDMGKAEVDGSS 305
Query: 346 EHY-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404
E+ Q SL+ K + ++ D+VFHIGDI YA G+L +WD F+ QI P+AS V Y
Sbjct: 306 EYNDFQRASLNTTKQLIKDLKK--TDAVFHIGDICYANGYLSQWDQFIAQIEPIASTVPY 363
Query: 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVIS 464
M A GNHER + NSGS Y DSGGECG+P ET F +P ++ + WYS + F V
Sbjct: 364 MIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFCVAD 423
Query: 465 TEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM-YSSLDGFLSVDKFFV----KS 519
TEHDW +EQY +I+ LASVDR K PWLIF HR + YSS + F +S
Sbjct: 424 TEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMGRES 483
Query: 520 VEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAP----VH 575
++ L K KVD+ ++GH HNYERTC V+++ C +++ SNY AP +H
Sbjct: 484 LQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCT-----------SHEKSNYKAPLNGTIH 532
Query: 576 AIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQE-IQLEFVNADTRKVEDSFRI 633
+ G G L +F+ WSL R +G+L+ A + E+ + +V DSF I
Sbjct: 533 IVAGGGGAGLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEYKKSSDGRVHDSFTI 591
|
|
| DICTYBASE|DDB_G0281861 DDB_G0281861 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 510 (184.6 bits), Expect = 6.1e-73, Sum P(3) = 6.1e-73
Identities = 127/310 (40%), Positives = 169/310 (54%)
Query: 352 GSLSVVKAMSDEVNN-GNVD-------SVFHIGDISYATGFLVEWDFFLHQITPVASRVS 403
GS V+AM + N+ +D SV HIGDISYA G WD+F+ + P+ S+V
Sbjct: 297 GSSPFVRAMGKQSNSIDRLDPSQTPFWSVHHIGDISYARGKAFIWDYFMDSMQPIVSKVP 356
Query: 404 YMTAIGNHERDYVN-----SGSVYSTPDSGGECGIPYETYFPMPTPSKDRP---WYSIEQ 455
YM +IGNHE D++ S S Y + DSGGECG+PY F M T ++D W+S E
Sbjct: 357 YMVSIGNHEYDFIGQPFAPSWSNYGS-DSGGECGVPYSKRFHM-TGAEDSTRNLWFSYEN 414
Query: 456 ASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSL---DGFLSV 512
+HFTV+S EHD+ S Q++W+ DLASVDR KTPW+IF+GHRP+Y+S D S+
Sbjct: 415 GPIHFTVMSAEHDFLPGSPQFEWLNNDLASVDREKTPWVIFSGHRPLYTSALPEDSIGSI 474
Query: 513 DKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTA 572
+++EPL K VD+ L+GHVH YERTC N T DN D
Sbjct: 475 TALR-EAIEPLFQKYDVDMALWGHVHIYERTCGFIGNF-----TCADNDND--------G 520
Query: 573 PVHAIIGMAG--FSL----DKFNKNNA-----TWSLSRVAKFGYLRGHATKQEIQLEFVN 621
VH IIGMAG +S+ + N WS+ R +G++R +A + EFV
Sbjct: 521 TVHVIIGMAGNTYSVPWEGSDISSGNGHEDEPEWSIFRSISYGHVRFYANTTSLYFEFVG 580
Query: 622 ADTRKVEDSF 631
V DSF
Sbjct: 581 NHRSIVHDSF 590
|
|
| TAIR|locus:2063777 PAP9 "purple acid phosphatase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 323 (118.8 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 91/262 (34%), Positives = 130/262 (49%)
Query: 201 ILSRTQPVNFANP-KKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGD-DGKTQTSEV 258
+L+ + +NF +P HLS D+ MR+ +V+GD E ++ YG+ K V
Sbjct: 127 LLTESNQLNFRFAVNRPEQIHLSYTDNIN-EMRVVFVTGDGEEREARYGEVKDKLDNIAV 185
Query: 259 ST---FTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKI 315
+ + E+MC + S GW +PG+ AVM L+ Y+ GS+ WS+
Sbjct: 186 ARGVRYEIEHMCHAPANSTV---GWRDPGWTFDAVMKNLKQGIRYYYQVGSDLKGWSEIH 242
Query: 316 QFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDS---V 372
F + G + + F+ +GDMG +T + SLS VK + ++ D V
Sbjct: 243 SFVSRNEGSEETLAFM-FGDMG-CYTPYTTFIRGEEESLSTVKWILRDIEALGDDKPVIV 300
Query: 373 FHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVN-------SGSVYSTP 425
HIGDISYA G+ WD F QI P+AS+V Y IGNHE D+ N + VY
Sbjct: 301 SHIGDISYARGYSWIWDEFFTQIEPIASKVPYHVCIGNHEYDWPNQPWKPDWAAYVYGK- 359
Query: 426 DSGGECGIPYETYFPMPTPSKD 447
DSGGECG+PY F MP S +
Sbjct: 360 DSGGECGVPYSVKFNMPGNSTE 381
|
|
| TAIR|locus:2014839 PAP2 "AT1G13900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 136/423 (32%), Positives = 201/423 (47%)
Query: 251 GKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVD 310
G + + + +E+MC S S GW +PG+I VM L Y+ GS++
Sbjct: 183 GNSAAARGMRYEREHMCDSPANST---IGWRDPGWIFDTVMKNLNDGVRYYYQVGSDSKG 239
Query: 311 WSDKIQFRTPPAGGSDEMKFL--------AYGDMGKAPRDA-STEHYIQPGSLSVVKAMS 361
WS+ + + + F+ Y + ++ ST +I L ++A+
Sbjct: 240 WSEIHSYIARDVTAEETVAFMFGDMGCATPYTTFIRTQDESISTVKWI----LRDIEALG 295
Query: 362 DEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVN---- 417
D+ + HIGDISYA G+ WD F Q+ P+AS V Y IGNHE D+
Sbjct: 296 DKPA-----MISHIGDISYARGYSWVWDEFFAQVEPIASTVPYHVCIGNHEYDFSTQPWK 350
Query: 418 ---SGSVYSTPDSGGECGIPYETYFPMP------TPSKDRP----WYSIEQASVHFTVIS 464
+ S+Y D GGECG+PY F MP T K P +YS + +VHF IS
Sbjct: 351 PDWAASIYGN-DGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVYIS 409
Query: 465 TEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEP 522
TE ++ QY++I++DL SVDR KTP+++ GHRPMY++ + + + V+ +EP
Sbjct: 410 TETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSNEVRDTMIRQKMVEHLEP 469
Query: 523 LLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAG 582
L +KN V L L+GHVH YER C + N C T N PVH +IGMAG
Sbjct: 470 LFVKNNVTLALWGHVHRYERFCPISNNTC-----------GTQWQGN---PVHLVIGMAG 515
Query: 583 FSLDKF---NKNNATW--------SLSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSF 631
N+ S+ R +FGY R A K+++ + FV +V D+
Sbjct: 516 QDWQPIWQPRPNHPDLPIFPQPEQSMYRTGEFGYTRLVANKEKLTVSFVGNHDGEVHDTV 575
Query: 632 RII 634
++
Sbjct: 576 EML 578
|
|
| DICTYBASE|DDB_G0282559 dduA "N-terminal purple acid phosphatase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 344 (126.2 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 121/439 (27%), Positives = 196/439 (44%)
Query: 230 SMRLTWVSGDKEPQQVEYG-DDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY--- 285
S++L + + + Y ++ K T ST E + S+ S + + G+
Sbjct: 27 SIKLAFTKSKDQMRVTWYTINETKAPTVLFSTEMFEPIQDSSFTSIGEIISYDTIGFDGK 86
Query: 286 IHTAVMTGLQPSSTVSYRYGSEAVD-WSDKIQFRT----PPAGGSDEMKFLAYGDMGKAP 340
I+TAVM+ L PS+ Y G ++++ WS F T P G +GDMG
Sbjct: 87 INTAVMSSLSPSTMYFYCVGDKSLNIWSSIFNFTTNQFDAPFGKVIPFTTSFFGDMGWIE 146
Query: 341 RDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT--------GFLVEWDFFL 392
D+ + V + +N + + H+GDI+YA G W+ F
Sbjct: 147 GDSLNS------DVYTVDNLISRINE--IQILHHVGDIAYADKQKPYNLPGNQTIWNKFQ 198
Query: 393 HQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYS 452
+ I+P++S + Y+T GNH+R +++ SVY+ +T+ MP + WYS
Sbjct: 199 NSISPLSSHLPYLTCPGNHDR-FIDL-SVYT------------KTW-QMPVDFESDSWYS 243
Query: 453 IEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSK-TPWLIFAGHRPMYSSL--DGF 509
+ +HF S+EHD++ S Q+ WI+ DL +S W++ HRP Y S+ D
Sbjct: 244 YDYNGIHFVGFSSEHDYFPLSSQHTWIENDLKQYRKSNPNGWIVMYSHRPFYCSVVWDWC 303
Query: 510 LSVD-----KFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDT 564
++D K ++ S+E LL K VDL + GH H+YERT VF+NK MG
Sbjct: 304 SNIDVVESKKIYLWSLEDLLYKYNVDLFISGHAHSYERTLPVFKNKIMG----------- 352
Query: 565 YDHSNYTAPVHAIIGMAGF--SLDKFNKNNATWSLS-RVAKFGY-LRGHATKQEIQLEFV 620
D + A VH ++G G D + + W+ R + G+ L + +FV
Sbjct: 353 -DVESPKATVHIVVGTGGDVEGEDMIWQPSQQWTTGLRTSINGFGLLNVINSTTLNWQFV 411
Query: 621 NADTRKVEDSFRIIRRQID 639
+ D F + + Q D
Sbjct: 412 ANINNTIIDEFNLTKGQFD 430
|
|
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 265 (98.3 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 76/233 (32%), Positives = 108/233 (46%)
Query: 376 GDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPY 435
GD+SYA +WD F + P+AS +M GNHE++ + V +PY
Sbjct: 174 GDLSYADYMQHKWDTFGELVQPLASVRPWMVTQGNHEKESIPF-IVDEFVSFNSRWKMPY 232
Query: 436 ETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLI 495
E + S +YS E A VH ++ + D+ S+QY W++ DL+ VDR +TPWLI
Sbjct: 233 EE-----SGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLI 287
Query: 496 FAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNK---CM 552
H P Y+S + + +EPLL + VD+V GHVH YERT V K C
Sbjct: 288 VLFHVPWYNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCG 347
Query: 553 GIP-TKDDNGIDTYDHSNYT--APVHAIIGMAGFS---LDKFNKNNATWSLSR 599
+ T D G Y +P ++ A F L N +A W+ R
Sbjct: 348 PVHITIGDGGNREGLARKYKDPSPEWSVFREASFGHGELQMVNSTHALWTWHR 400
|
|
| UNIPROTKB|F1MUZ7 LOC790415 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 309 (113.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 112/377 (29%), Positives = 166/377 (44%)
Query: 285 YIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDAS 344
YIH + GL P YR GS A WS + +FR G + +GD+G D
Sbjct: 92 YIHRVTLQGLLPGVQYVYRCGS-AQGWSRRFRFRALKKGPHWSPRLAVFGDLGA---D-- 145
Query: 345 TEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVASRV 402
P +L ++ + G D++ H+GD +Y D F+ I PVA+ +
Sbjct: 146 -----NPRALPRLRR---DTQQGMYDAILHVGDFAYNMDQDNARVGDRFMKLIEPVAASL 197
Query: 403 SYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTV 462
YMT GNHE Y N +S Y+ F MP ++ WYS + H
Sbjct: 198 PYMTCPGNHEERY-N----FSN----------YKARFSMPGNTEGL-WYSWDLGPAHIIS 241
Query: 463 ISTEHDWWLN------SEQYKWIQKDL--ASVDRSKTPWLIFAGHRPMYSS---LDGFLS 511
+STE ++L+ Q+ W++ DL A+ +R+ PW+I GHRPMY S LD
Sbjct: 242 LSTEVYFFLHYGRHLVERQFHWLESDLQKANKNRAVRPWIITMGHRPMYCSNADLDDCTW 301
Query: 512 VD---------KFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGI 562
+ KF+ +E L K VDL L+ H H+YER ++ + + NG
Sbjct: 302 HESKVRKGLRGKFY--GLEDLFYKYGVDLQLWAHEHSYERLWPIYNYQVL-------NGS 352
Query: 563 DTYDHSNYTAPVHAIIGMAGFS--LDKFNKNNATWSLSRVAKFGYLRGHATK-QEIQLEF 619
+++ PVH I G AG L F WS RV ++GY R H + ++
Sbjct: 353 QEMPYTHPRGPVHIITGSAGCEELLTPFTLFPRPWSALRVKEYGYTRLHILNGTHVHIQQ 412
Query: 620 VNADTR-KVEDSFRIIR 635
V+ D K+ D ++R
Sbjct: 413 VSDDQDGKIVDDVWVVR 429
|
|
| DICTYBASE|DDB_G0293460 DDB_G0293460 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 306 (112.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 128/440 (29%), Positives = 197/440 (44%)
Query: 229 TSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQE----NMCS-SALPSPAKDF---GW 280
TS+RL + E + + D+ S + F E N S + + + + G+
Sbjct: 22 TSIRLAFTKNQDEVRVTWWTDEA--MESPIVLFNNEMFVPNQDSVNGIEATVMSYDTLGF 79
Query: 281 HNPGYIHTAVMTGLQPSSTVSYRYGSEAVD-WSDKIQFRTPPA---GGS-DEMKFLAYGD 335
H G+ TA++TGLQ + Y G++ D +S+ F T GG +GD
Sbjct: 80 H--GHPTTAILTGLQEMTQYFYSIGNKHSDEYSEVFNFTTGKINQIGGQVTPFSLSIFGD 137
Query: 336 MGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYA--------TGFLVE 387
MG + ++ Y ++ + +D N H+GDI+YA G
Sbjct: 138 MGYGGKGLDSDFYTVA---NLYERSNDLAFN------IHVGDIAYADETWETAINGNQTI 188
Query: 388 WDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKD 447
W+ FL I PV+S + YMT GNH+ Y SVY T+ MPT D
Sbjct: 189 WNQFLDSINPVSSHLIYMTCPGNHDIFY--DLSVYR------------RTWL-MPTDDND 233
Query: 448 R-PWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTP--WLIFAGHRPMY- 503
+ WYS + VHF IS+EHD+ S Q+ WI+ DL + RS P ++I HRP Y
Sbjct: 234 QVSWYSFDYNGVHFVGISSEHDFLPLSPQHTWIENDLKNF-RSNNPDNFIIMFAHRPFYC 292
Query: 504 SSLDGFLS-----VDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKD 558
S++ + + + K FV S+E LL K VD+ + GH H+ ERT +PT +
Sbjct: 293 STVWNWCNTTEDYLKKAFVYSLENLLYKYNVDMFISGHTHSSERT----------LPTYN 342
Query: 559 DNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNN----ATWSLS-RVAKFGY-LRGHATK 612
I TY SN A +H +G G S + N+++ WS R++ G+ L
Sbjct: 343 GQPIGTY--SNPKATIHITVGTGGNS--EGNQHHWYPQPIWSSGYRISDNGFGLMNFINS 398
Query: 613 QEIQLEFV-NADTRKVEDSF 631
+ +FV N + +++ F
Sbjct: 399 TTLSWQFVANINNTIIDEIF 418
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q5MAU8 | PPA27_ARATH | No assigned EC number | 0.3553 | 0.8826 | 0.9230 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00028616001 | SubName- Full=Chromosome chr13 scaffold_45, whole genome shotgun sequence; (640 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 639 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-89 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 2e-34 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 2e-21 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 3e-14 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 7e-11 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-07 | |
| COG3540 | 522 | COG3540, PhoD, Phosphodiesterase/alkaline phosphat | 2e-05 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 279 bits (717), Expect = 1e-89
Identities = 114/317 (35%), Positives = 152/317 (47%), Gaps = 38/317 (11%)
Query: 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVE- 387
KF +GDMG S + + + E+ N D++ H+GD++YA G+
Sbjct: 6 KFAVFGDMG----------QNTNNSTNTLDHLEKELGN--YDAILHVGDLAYADGYNNGS 53
Query: 388 -WDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSK 446
WD F+ QI P+AS V YM GNHE DY S P + P+ S
Sbjct: 54 RWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFF-------PRFRFPHSPSGST 106
Query: 447 DRPWYSIEQASVHFTVISTEHDWWLN---SEQYKWIQKDLASVDRSKTPWLIFAGHRPMY 503
WYS + VHF +STE D++ + S QY W++ DLA VDRSKTPW+I GHRPMY
Sbjct: 107 SNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMY 166
Query: 504 SS--LDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNG 561
S + ++E L K VDLVL GHVH YERTC V+ +G
Sbjct: 167 CSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVG-------- 218
Query: 562 IDTYDHSNYTAPVHAIIGMAG--FSLDKFNKNNATWSLSRVAKFGYLRGHATKQ-EIQLE 618
D +SN PVH +IG G LD F+ WS R + +G+ R + E
Sbjct: 219 -DCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFE 277
Query: 619 FVNADTRKVEDSFRIIR 635
++ D V DSF II+
Sbjct: 278 WIRNDDGVVIDSFWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 2e-34
Identities = 113/409 (27%), Positives = 174/409 (42%), Gaps = 68/409 (16%)
Query: 207 PVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGD-DGKTQTSEVSTFTQEN 265
P N +P P H+S V MR++W++ D P V YG GK + S T
Sbjct: 35 PDNEDDPTHPDQVHISLVGPD--KMRISWITQDSIPPSVVYGTVSGKYEGSANGT----- 87
Query: 266 MCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS 325
S + G I+ V+ L+P++ Y+ G + + + FRTPP+
Sbjct: 88 ------SSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSS--TQEFSFRTPPS--K 137
Query: 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL 385
+KF GD+G + ST + V+ + D GD+SYA +
Sbjct: 138 FPIKFAVSGDLGTSEWTKST---------------LEHVSKWDYDVFILPGDLSYANFYQ 182
Query: 386 VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMP--- 442
WD F + P+AS+ +M GNHE + + ++ + Y + MP
Sbjct: 183 PLWDTFGRLVQPLASQRPWMVTHGNHELEKIPI--LHPEKFTA------YNARWRMPFEE 234
Query: 443 TPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM 502
+ S +YS VH ++ + D+ SEQY+W++ +L +DR TPW++ H P
Sbjct: 235 SGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW 294
Query: 503 YSSLDGFLSVDKFFVK---SVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDD 559
Y+S + +K V S+E LL K +VDLV GHVH YER V++ K
Sbjct: 295 YNSNEAHQG-EKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGK--------- 344
Query: 560 NGIDTYDHSNYTAPVHAIIGMAGFS---LDKFNKNNATWSLSRVAKFGY 605
++ PV+ IG G K+ SL R A FG+
Sbjct: 345 --------TDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGH 385
|
Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 91.7 bits (227), Expect = 2e-21
Identities = 38/212 (17%), Positives = 66/212 (31%), Gaps = 27/212 (12%)
Query: 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW 388
+ L GD+ L ++ + + + D V +GD+ G
Sbjct: 1 RILVIGDLH-----------GGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDR-GPPSLE 48
Query: 389 DFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDR 448
L + + GNH+ D NS Y
Sbjct: 49 VLALLFALKLKAPGPVYLVRGNHDFDSGNS---------------ELGFYLECAGLPYVL 93
Query: 449 PWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDG 508
+ +V +S+ + ++++ + + I H P+ SLD
Sbjct: 94 GNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDS 153
Query: 509 FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540
+ F +++E LL N VDLVL GH H
Sbjct: 154 GDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 67.1 bits (165), Expect = 3e-14
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 571 TAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHAT-KQEIQLEFVNADTRKVED 629
APVH ++G AG LD F WS R + +GY R + + EFV +D V D
Sbjct: 1 KAPVHIVVGAAGNGLDPFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDDGTVLD 60
Query: 630 SF 631
SF
Sbjct: 61 SF 62
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 7e-11
Identities = 74/326 (22%), Positives = 106/326 (32%), Gaps = 80/326 (24%)
Query: 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG---- 383
++FLA GD G T V KAM+ D + +GD Y G
Sbjct: 1 LRFLALGDWGGG----GTAGQKA-----VAKAMAKVAAELGPDFILSLGDNFYDDGVGSV 51
Query: 384 ----FLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSV---YSTPDSGGECGIPYE 436
F ++ + +V + +GNH DY + S Y+ + +P
Sbjct: 52 DDPRFETTFEDVYSAP---SLQVPWYLVLGNH--DYSGNVSAQIDYTKRPNSPRWTMPAY 106
Query: 437 TY-FPMPTPSKDRPWYSIEQASVHFTVIST-----------EHDWWLN----SEQYKWIQ 480
Y P PS D +V F +I T N EQ W++
Sbjct: 107 YYRVSFPFPSSDT--------TVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLE 158
Query: 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540
K LA S W I GH P+YSS G V + PLL K KVD L GH HN
Sbjct: 159 KTLA---ASTADWKIVVGHHPIYSS--GEHGPTSCLVDRLLPLLKKYKVDAYLSGHDHNL 213
Query: 541 ERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRV 600
+ ++ G + G + +
Sbjct: 214 Q----HIKDDGSGTS-------------------FVVSGAGSKARPSVKHIDKVPQFFSG 250
Query: 601 AKF---GYLRGHATKQEIQLEFVNAD 623
G+ TK+E+ + F +AD
Sbjct: 251 FTSSGGGFAYLELTKEELTVRFYDAD 276
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-07
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 478 WIQKDLASVDRSKTPWL-------IFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVD 530
+ LA + P I H P Y LD + +++ LL K VD
Sbjct: 46 VLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVD 105
Query: 531 LVLFGHVHNYERT 543
LVL GH H YER
Sbjct: 106 LVLSGHTHVYERR 118
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|226070 COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 2e-05
Identities = 48/191 (25%), Positives = 73/191 (38%), Gaps = 29/191 (15%)
Query: 193 AGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGK 252
A G A P I + F +G ++S D T TS+ + W D EP
Sbjct: 22 ASGLAAPAIARFSGRPAFT------HG-VASGDPTATSVVI-WTRLDPEPLNGGRPVPVI 73
Query: 253 TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWS 312
+ S F+ + + SP D H + GL P YR+ + S
Sbjct: 74 WEVSTDENFSNIVRKGTVIASPELDHTVH-------VDLRGLSPDQDYFYRFKAGDER-S 125
Query: 313 DKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSV 372
+ RT PA G ++F+ + D AS + + + G ++ K M+ E D V
Sbjct: 126 PVGRTRTAPAPGRA-IRFVWFAD-------ASCQGW-EIGYMTAYKTMAKE----EPDFV 172
Query: 373 FHIGDISYATG 383
H+GD Y G
Sbjct: 173 IHLGDYIYEYG 183
|
Length = 522 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 639 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.93 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.9 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.9 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.9 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.85 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.85 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.84 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.82 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.74 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.67 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.66 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.64 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.63 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.57 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.55 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.54 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.51 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.47 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.45 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.44 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.43 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.37 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.37 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.36 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.31 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.18 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.17 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.1 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.0 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.96 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 98.95 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 98.92 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.92 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 98.91 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.91 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 98.9 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.87 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.85 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.81 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.81 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.8 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.8 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 98.77 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.67 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.62 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.61 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.61 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.61 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.6 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.46 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.46 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.42 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.4 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.33 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.23 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.23 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.22 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.21 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.21 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.12 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.11 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.08 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.07 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.05 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.01 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 97.99 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.94 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.94 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.92 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.91 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 97.89 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.78 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.77 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.71 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.7 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.68 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.55 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.45 | |
| PHA02239 | 235 | putative protein phosphatase | 97.36 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 97.33 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.27 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.24 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.17 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.14 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.12 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.11 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.07 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.0 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.94 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 96.94 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.9 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.89 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.88 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.86 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.75 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.66 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 96.62 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.61 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 96.59 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 96.52 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.49 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 96.41 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.32 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.81 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 95.8 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.68 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.42 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.13 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 95.01 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 94.9 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 94.68 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 94.51 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 94.3 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 94.26 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 94.19 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 93.9 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 93.79 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 93.72 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 93.57 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 93.5 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 93.22 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 93.06 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 92.91 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 92.03 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 91.64 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 90.48 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-70 Score=575.69 Aligned_cols=386 Identities=39% Similarity=0.676 Sum_probs=315.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.+.|+|+||++++.. ++|+|+|.|.+.....|+||.................+|+. .+ .+|+..|++|+|+|+
T Consensus 42 ~~~peQvhlS~~~~~-~~m~VswvT~~~~~~~V~Yg~~~~~~~~~~~~~~~~~~~~~----y~--~~~~~sg~ih~~~~~ 114 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNL-NEMRVSWVTGDGEENVVRYGEVKDKLDNSAARGMTEAWTDG----YA--NGWRDSGYIHDAVMK 114 (452)
T ss_pred CCCCCeEEEeccCCC-CcEEEEEeCCCCCCceEEEeecCCCccccccccceEEEecc----cc--cccceeeeEeeeeec
Confidence 467999999999865 59999999999988999999643321111012222223331 11 256788999999999
Q ss_pred CCCCCcEEEEEEccCCCccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEE
Q 006591 293 GLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSV 372 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfV 372 (639)
+|+|+|+|+||||++.. ||++++|+|+| +.+.+.+|+++||||......+. . ... ....++|+|
T Consensus 115 ~L~~~t~YyY~~Gs~~~-wS~~f~F~t~p-~~~~~~~~~i~GDlG~~~~~~s~-----------~-~~~--~~~~k~d~v 178 (452)
T KOG1378|consen 115 NLEPNTRYYYQVGSDLK-WSEIFSFKTPP-GQDSPTRAAIFGDMGCTEPYTST-----------L-RNQ--EENLKPDAV 178 (452)
T ss_pred CCCCCceEEEEeCCCCC-cccceEeECCC-CccCceeEEEEccccccccccch-----------H-hHH--hcccCCcEE
Confidence 99999999999999864 99999999999 33368999999999987654321 1 111 123479999
Q ss_pred EEcCCccccCCcH-HHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCC---CC
Q 006591 373 FHIGDISYATGFL-VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSK---DR 448 (639)
Q Consensus 373 l~~GDl~y~~g~~-~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~---~~ 448 (639)
||+|||+|++++. .+||+|.+++||+++.+|+|++.||||+++..+. |+.+|..+|.||.+.. .+
T Consensus 179 lhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~s~s~~~ 247 (452)
T KOG1378|consen 179 LHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNSSESDSN 247 (452)
T ss_pred EEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCcCCCCCc
Confidence 9999999999988 6999999999999999999999999999876432 5779999999996643 46
Q ss_pred CeEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC--CC-CchhHHHHHHHHHH
Q 006591 449 PWYSIEQASVHFTVISTEHDW--WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD--GF-LSVDKFFVKSVEPL 523 (639)
Q Consensus 449 ~~Ysfd~G~v~fi~LDT~~~~--~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~--~~-~~~~~~~r~~l~~L 523 (639)
.||||++|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+|++.. .. .+....+++.|++|
T Consensus 248 l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l 327 (452)
T KOG1378|consen 248 LYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPL 327 (452)
T ss_pred eeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHH
Confidence 899999999999999999875 46799999999999999988799999999999999886 22 23334678899999
Q ss_pred HHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCC--CCCCCCCCCCCccceecc
Q 006591 524 LLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGF--SLDKFNKNNATWSLSRVA 601 (639)
Q Consensus 524 l~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~--~l~~~~~~~~~ws~~~~~ 601 (639)
|.+|+||++|+||+|.|||+||+||.+|.... |-..+ .++.|||||++|.||+ .+..+..++|+||++|..
T Consensus 328 ~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~-----~~~~~--~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R~~ 400 (452)
T KOG1378|consen 328 FVKYKVDVVFWGHVHRYERFCPIYNNTCGTGW-----GPVHL--VDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFREG 400 (452)
T ss_pred HHHhceeEEEeccceehhccchhhcceeeccC-----Ccccc--cCCCCCEEEEEccCCcccccCcccCCCCcccccccc
Confidence 99999999999999999999999999996532 21122 2568999999999996 456666679999999999
Q ss_pred cccEEEEEE-eCCEEEEEEEEC--CCCeEEEEEEEEecCCC
Q 006591 602 KFGYLRGHA-TKQEIQLEFVNA--DTRKVEDSFRIIRRQID 639 (639)
Q Consensus 602 ~~Gy~~v~v-~~~~L~~e~~~~--~dG~v~D~f~I~k~~~d 639 (639)
+|||++|++ |.+++.++.+++ ..|.+.|+|+|.|+..+
T Consensus 401 dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~ 441 (452)
T KOG1378|consen 401 DFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRD 441 (452)
T ss_pred cCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCc
Confidence 999999999 778999999886 33899999999998754
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-66 Score=564.22 Aligned_cols=367 Identities=29% Similarity=0.473 Sum_probs=301.4
Q ss_pred cCCCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcc----cceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQ----TSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 211 ~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~----~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
+++..|+|+||++++ .++|+|+|+|.+...+.|+||+.+... .+.+++|... ..+ .+|++
T Consensus 39 ~~~~~P~qvhls~~~--~~~m~V~W~T~~~~~~~V~yG~~~~~l~~~a~g~~~~~~~~-------------~~~-~~g~i 102 (427)
T PLN02533 39 DDPTHPDQVHISLVG--PDKMRISWITQDSIPPSVVYGTVSGKYEGSANGTSSSYHYL-------------LIY-RSGQI 102 (427)
T ss_pred CCCCCCceEEEEEcC--CCeEEEEEECCCCCCCEEEEecCCCCCcceEEEEEEEEecc-------------ccc-cCCeE
Confidence 467899999999997 479999999999888999999765432 1223344321 112 36899
Q ss_pred EEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN 366 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~ 366 (639)
|+|+|+||+|+|+|+||||.+ .+|+.++|+|+|.. .+++|+++||+|..... ..++ +.+.+
T Consensus 103 H~v~l~~L~p~T~Y~Yrvg~~--~~s~~~~F~T~p~~--~~~~f~v~GDlG~~~~~-----------~~tl----~~i~~ 163 (427)
T PLN02533 103 NDVVIGPLKPNTVYYYKCGGP--SSTQEFSFRTPPSK--FPIKFAVSGDLGTSEWT-----------KSTL----EHVSK 163 (427)
T ss_pred EEEEeCCCCCCCEEEEEECCC--CCccceEEECCCCC--CCeEEEEEEeCCCCccc-----------HHHH----HHHHh
Confidence 999999999999999999965 36889999999863 68999999999864321 1233 34455
Q ss_pred CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC-
Q 006591 367 GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS- 445 (639)
Q Consensus 367 ~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~- 445 (639)
.+|||||++||++|++++..+|+.|+++++++++.+|+|+++||||.+... ....+....|.++|.||...
T Consensus 164 ~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~~~ 235 (427)
T PLN02533 164 WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFEES 235 (427)
T ss_pred cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcccc
Confidence 789999999999999888889999999999999999999999999986321 11123355788999999642
Q ss_pred --CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC--chhHHHHHHHH
Q 006591 446 --KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL--SVDKFFVKSVE 521 (639)
Q Consensus 446 --~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~--~~~~~~r~~l~ 521 (639)
..+.||+|++|++|||+||++.++..+.+|++||+++|++++++++||+||++|+|+|++..... .....+++.|+
T Consensus 236 g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le 315 (427)
T PLN02533 236 GSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESME 315 (427)
T ss_pred CCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHH
Confidence 35789999999999999999988888899999999999999888899999999999998764221 12345788999
Q ss_pred HHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCC---CCCCCCCCCccce
Q 006591 522 PLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSL---DKFNKNNATWSLS 598 (639)
Q Consensus 522 ~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l---~~~~~~~~~ws~~ 598 (639)
+||.+++||++|+||+|.|||++|+|+++| ++.||+|||+|+||+.. ..+..++++|+++
T Consensus 316 ~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~-----------------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~ 378 (427)
T PLN02533 316 TLLYKARVDLVFAGHVHAYERFDRVYQGKT-----------------DKCGPVYITIGDGGNREGLATKYIDPKPDISLF 378 (427)
T ss_pred HHHHHhCCcEEEecceecccccccccCCcc-----------------CCCCCEEEEeCCCccccccccccCCCCCCceeE
Confidence 999999999999999999999999999865 23689999999999863 3455567899999
Q ss_pred ecccccEEEEEE-eCCEEEEEEEECCCC--eEEEEEEEEecC
Q 006591 599 RVAKFGYLRGHA-TKQEIQLEFVNADTR--KVEDSFRIIRRQ 637 (639)
Q Consensus 599 ~~~~~Gy~~v~v-~~~~L~~e~~~~~dG--~v~D~f~I~k~~ 637 (639)
|..+|||.+|++ +.++|+++|+++.+| .+.|+|+|.|-.
T Consensus 379 r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~ 420 (427)
T PLN02533 379 REASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLL 420 (427)
T ss_pred EeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEecc
Confidence 999999999997 999999999997666 389999999854
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=380.34 Aligned_cols=279 Identities=40% Similarity=0.687 Sum_probs=221.3
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH--HHHHHHHHhhhhhhcCCc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL--VEWDFFLHQITPVASRVS 403 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~--~~wd~f~~~l~~l~~~vP 403 (639)
.++||+++||+|.... .+.+++++|.++ ..+|||||++||++|+.+.. .+|+.|++.++++.+.+|
T Consensus 3 ~~~~f~v~gD~~~~~~----------~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P 70 (294)
T cd00839 3 TPFKFAVFGDMGQNTN----------NSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP 70 (294)
T ss_pred CcEEEEEEEECCCCCC----------CcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC
Confidence 6799999999997521 235677777654 47899999999999988765 789999999999999999
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCccccccccccCC---CCCCCCCCeEEEEeCCEEEEEEeCCCCC---CCCHHHHH
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPM---PTPSKDRPWYSIEQASVHFTVISTEHDW---WLNSEQYK 477 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~---P~~~~~~~~Ysfd~G~v~fi~LDT~~~~---~~g~~Q~~ 477 (639)
+++++||||.......... ..+..++.+ +.....+.||+|++|++|||+|||+... ..+.+|++
T Consensus 71 ~~~~~GNHD~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~ 140 (294)
T cd00839 71 YMVTPGNHEADYNFSFYKI----------KAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYD 140 (294)
T ss_pred cEEcCcccccccCCCCccc----------ccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHH
Confidence 9999999998643221100 000001112 2222356799999999999999998765 67899999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCCCc--hhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCC
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIP 555 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~--~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 555 (639)
||+++|+++++.+.+|+||++|+|+|........ .....++.|++||++|+|+++|+||+|.|+|++|+++++|+...
T Consensus 141 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~ 220 (294)
T cd00839 141 WLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDC 220 (294)
T ss_pred HHHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEecccc
Confidence 9999999987667799999999999987653222 24567899999999999999999999999999999999886211
Q ss_pred ccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCC--CCCccceecccccEEEEEEeC-CEEEEEEEECCCCeEEEEEE
Q 006591 556 TKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKN--NATWSLSRVAKFGYLRGHATK-QEIQLEFVNADTRKVEDSFR 632 (639)
Q Consensus 556 ~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~--~~~ws~~~~~~~Gy~~v~v~~-~~L~~e~~~~~dG~v~D~f~ 632 (639)
..| .++++|+|||+|+||+.+...... .++|+.++...+||++|++.+ ++|+++++++.+|+|+|+|+
T Consensus 221 -------~~~--~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~ 291 (294)
T cd00839 221 -------NPY--SNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFW 291 (294)
T ss_pred -------ccc--cCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEE
Confidence 122 246799999999999987644322 358999999999999999965 59999999988999999999
Q ss_pred EEe
Q 006591 633 IIR 635 (639)
Q Consensus 633 I~k 635 (639)
|.|
T Consensus 292 i~k 294 (294)
T cd00839 292 IIK 294 (294)
T ss_pred EeC
Confidence 987
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=290.45 Aligned_cols=275 Identities=19% Similarity=0.252 Sum_probs=198.0
Q ss_pred EECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc----HHHHHH-H
Q 006591 317 FRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF----LVEWDF-F 391 (639)
Q Consensus 317 F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~----~~~wd~-f 391 (639)
|.+.+.. ...++|+++||+|.+. ..+..+.++|.+.+++.++|||+.+||+. .+|. ..+|+. |
T Consensus 17 ~~~~~~~-~~~l~F~~vGDwG~g~----------~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~F 84 (394)
T PTZ00422 17 FISSYSV-KAQLRFASLGNWGTGS----------KQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCF 84 (394)
T ss_pred EEeeccc-CCeEEEEEEecCCCCc----------hhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhH
Confidence 4444333 2579999999999642 12467788888888889999999999998 4443 355765 4
Q ss_pred HHhhhhhh--cCCceEEecCCCCcCCCCCCC--ccCCC----CCCC--cc--ccccccccCCCCCCCCCCeEEEE----e
Q 006591 392 LHQITPVA--SRVSYMTAIGNHERDYVNSGS--VYSTP----DSGG--EC--GIPYETYFPMPTPSKDRPWYSIE----Q 455 (639)
Q Consensus 392 ~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~--~y~~~----dsgg--e~--~~~y~~~f~~P~~~~~~~~Ysfd----~ 455 (639)
-+...... .++|+++++||||+..+.... .|... +... +. ...-..+|.||. .||++. .
T Consensus 85 E~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~ 159 (394)
T PTZ00422 85 ENVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTD 159 (394)
T ss_pred hhhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeec
Confidence 44444433 578999999999984222110 01100 0000 00 001235788884 577542 1
Q ss_pred -------------CCEEEEEEeCCCC-----C-CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH
Q 006591 456 -------------ASVHFTVISTEHD-----W-WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF 516 (639)
Q Consensus 456 -------------G~v~fi~LDT~~~-----~-~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~ 516 (639)
..+.||+|||... + .....|++||+++|+.+ ++.++|+||++|||+|+.+.+ +.+.++
T Consensus 160 ~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~h--g~~~~L 236 (394)
T PTZ00422 160 TSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSS--KGDSYL 236 (394)
T ss_pred ccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCC--CCCHHH
Confidence 1289999999631 1 23578999999999754 456789999999999998863 234668
Q ss_pred HHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCcc
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWS 596 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws 596 (639)
+..|+|||++|+||++|+||+|+|||..+ +++.||++|+||...... ....+|+
T Consensus 237 ~~~L~PLL~ky~VdlYisGHDH~lq~i~~-------------------------~gt~yIvSGaGs~~~~~~-~~~~~~s 290 (394)
T PTZ00422 237 SYYLLPLLKDAQVDLYISGYDRNMEVLTD-------------------------EGTAHINCGSGGNSGRKS-IMKNSKS 290 (394)
T ss_pred HHHHHHHHHHcCcCEEEEccccceEEecC-------------------------CCceEEEeCccccccCCC-CCCCCCc
Confidence 89999999999999999999999999631 246799999998865432 2346778
Q ss_pred ceecccccEEEEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 597 LSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 597 ~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
.+....+||+.++++.++|+++|++..+|++++++++.|+.
T Consensus 291 ~F~~~~~GF~~~~l~~~~l~~~fid~~~GkvL~~~~~~~~~ 331 (394)
T PTZ00422 291 LFYSEDIGFCIHELNAEGMVTKFVSGNTGEVLYTHKQPLKK 331 (394)
T ss_pred ceecCCCCEEEEEEecCEEEEEEEeCCCCcEEEEeeecccc
Confidence 88888999999999999999999976799999999997754
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=270.37 Aligned_cols=247 Identities=27% Similarity=0.377 Sum_probs=180.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH----HHH-HHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL----VEW-DFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~----~~w-d~f~~~l~~l~~~v 402 (639)
++|+++||+|.... +....+.+.|.+.+++.+|||||++||++|+.|.. .+| +.|.+.++.+..++
T Consensus 1 ~~f~~~gD~g~~~~---------~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (277)
T cd07378 1 LRFLALGDWGGGGT---------AGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV 71 (277)
T ss_pred CeEEEEeecCCCCC---------HHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC
Confidence 48999999997521 12356667777777778999999999999887642 334 34555555554689
Q ss_pred ceEEecCCCCcCCCCCCC-ccCCCCCCCccccccccccCCCCCCCCCCeEEEEeC------CEEEEEEeCCCCC------
Q 006591 403 SYMTAIGNHERDYVNSGS-VYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQA------SVHFTVISTEHDW------ 469 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~-~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G------~v~fi~LDT~~~~------ 469 (639)
|+|+++||||........ .|. ...+..+|.+| ..||+|+++ +++||+|||....
T Consensus 72 P~~~v~GNHD~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~ 138 (277)
T cd07378 72 PWYLVLGNHDYSGNVSAQIDYT--------KRPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDI 138 (277)
T ss_pred CeEEecCCcccCCCchheeehh--------ccCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCccccc
Confidence 999999999985211000 000 00012334444 469999998 7999999997531
Q ss_pred ---------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 470 ---------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 470 ---------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
..+.+|++||++.|+++. .+|+||++|+|+++..... .....++.|++++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~ 213 (277)
T cd07378 139 ASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNL 213 (277)
T ss_pred cccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccc
Confidence 246899999999999753 3799999999998765422 22566899999999999999999999999
Q ss_pred ceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCC---CCCCccceecccccEEEEEEeCCEEEE
Q 006591 541 ERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNK---NNATWSLSRVAKFGYLRGHATKQEIQL 617 (639)
Q Consensus 541 eRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~---~~~~ws~~~~~~~Gy~~v~v~~~~L~~ 617 (639)
++..+. ..++.||++|++|........ ..+.|..++...+||.+++|++++|++
T Consensus 214 ~~~~~~-----------------------~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~~~l~~ 270 (277)
T cd07378 214 QHIKDD-----------------------GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTKEELTV 270 (277)
T ss_pred eeeecC-----------------------CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEecCEEEE
Confidence 987421 136789999998876433221 133678888889999999999999999
Q ss_pred EEEECCCC
Q 006591 618 EFVNADTR 625 (639)
Q Consensus 618 e~~~~~dG 625 (639)
+|++ .+|
T Consensus 271 ~~~~-~~g 277 (277)
T cd07378 271 RFYD-ADG 277 (277)
T ss_pred EEEC-CCC
Confidence 9996 454
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=241.44 Aligned_cols=241 Identities=17% Similarity=0.168 Sum_probs=171.1
Q ss_pred CceEEEEEecCCCCCCCCCCcc--ccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcH----HHHHHHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEH--YIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFL----VEWDFFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~--~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~----~~wd~f~~~l~~ 397 (639)
++++|++++|+|.+........ .........++++++.+.+. +||+|+++||+++..... .+|+.|.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5799999999999854321110 00112234567777777665 999999999999775432 356677777777
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC------CC
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDW------WL 471 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~------~~ 471 (639)
+...+|+++++||||...... .+....|...|. ..||+|++|+++||+|||.... ..
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~----------~~~~~~f~~~~g-------~~~y~~~~~~~~~i~lds~~~~~~~~~~~~ 145 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPT----------EESIKDYRDVFG-------DDYFSFWVGGVFFIVLNSQLFFDPSEVPEL 145 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCC----------hhHHHHHHHHhC-------CcceEEEECCEEEEEeccccccCccccccc
Confidence 666899999999999842110 000112333332 3589999999999999996432 24
Q ss_pred CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC----chhHHHHHHHHHHHHhCCCeEEEeCcccccceeeccc
Q 006591 472 NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL----SVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVF 547 (639)
Q Consensus 472 g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~----~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~ 547 (639)
..+|++||+++|+++.+.+.+++||++|+|++....... ......+++|.++|++++|+++|+||+|.+++.. +
T Consensus 146 ~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~--~ 223 (262)
T cd07395 146 AQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR--Y 223 (262)
T ss_pred hHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE--E
Confidence 579999999999987544567899999999986443111 2234568899999999999999999999987632 1
Q ss_pred CCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEE
Q 006591 548 RNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVN 621 (639)
Q Consensus 548 ~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~ 621 (639)
.++.+++++++|..+.. ...||..+++++++++.|++.
T Consensus 224 -----------------------~g~~~~~~~~~~~~~~~-------------~~~g~~~~~v~~~~~~~~~~~ 261 (262)
T cd07395 224 -----------------------GGLEMVVTSAIGAQLGN-------------DKSGLRIVKVTEDKIVHEYYS 261 (262)
T ss_pred -----------------------CCEEEEEcCceecccCC-------------CCCCcEEEEECCCceeeeeee
Confidence 23456777777754321 246999999999999999974
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=217.62 Aligned_cols=267 Identities=21% Similarity=0.319 Sum_probs=172.8
Q ss_pred EEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHH-HHHHh
Q 006591 316 QFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWD-FFLHQ 394 (639)
Q Consensus 316 ~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd-~f~~~ 394 (639)
+|.-++.+ +.+++|+++||+|.... +.| .++..+|.+..+..++||||.+||++|++|...+.| +|.+.
T Consensus 33 ~l~~p~~~-dgslsflvvGDwGr~g~------~nq---s~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~s 102 (336)
T KOG2679|consen 33 RLYDPAKS-DGSLSFLVVGDWGRRGS------FNQ---SQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDS 102 (336)
T ss_pred hhcCCCCC-CCceEEEEEcccccCCc------hhH---HHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhh
Confidence 35544443 47899999999994432 111 344455555555679999999999999998765544 33333
Q ss_pred hhhhh----cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc---cccCCCCCCCCCCeEE----EE--eCCEEEE
Q 006591 395 ITPVA----SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE---TYFPMPTPSKDRPWYS----IE--QASVHFT 461 (639)
Q Consensus 395 l~~l~----~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~---~~f~~P~~~~~~~~Ys----fd--~G~v~fi 461 (639)
.+.+. -+.|||.+.||||+..+-.. +....|+ ++|.-|. .||. .+ .=++.++
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~A----------Qls~~l~~~d~RW~c~r-----sf~~~ae~ve~f~v~~~~f 167 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEA----------QLSPVLRKIDKRWICPR-----SFYVDAEIVEMFFVDTTPF 167 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhh----------hhhHHHHhhccceeccc-----HHhhcceeeeeeccccccc
Confidence 33332 36799999999998532211 0000111 2232221 1110 00 1123333
Q ss_pred EEeCCC-------CCC-------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC
Q 006591 462 VISTEH-------DWW-------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN 527 (639)
Q Consensus 462 ~LDT~~-------~~~-------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y 527 (639)
++|+-. +|. ....|+.||+..|++ ++++|+||++|||+.+.+. .+...+++++|.|||+++
T Consensus 168 ~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~--HG~T~eL~~~LlPiL~~n 242 (336)
T KOG2679|consen 168 MDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGH--HGPTKELEKQLLPILEAN 242 (336)
T ss_pred hhhheecccccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhc--cCChHHHHHHHHHHHHhc
Confidence 333321 121 236788999999997 6789999999999988775 344578899999999999
Q ss_pred CCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCcc----ceecccc
Q 006591 528 KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWS----LSRVAKF 603 (639)
Q Consensus 528 ~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws----~~~~~~~ 603 (639)
+||++++||+|+.|...- .+ ++.-|+++|+|...... ...++.|. .+.....
T Consensus 243 ~VdlY~nGHDHcLQhis~------------~e-----------~~iqf~tSGagSkaw~g-~~~~~~~~p~~lkF~Ydgq 298 (336)
T KOG2679|consen 243 GVDLYINGHDHCLQHISS------------PE-----------SGIQFVTSGAGSKAWRG-TDHNPEVNPKELKFYYDGQ 298 (336)
T ss_pred CCcEEEecchhhhhhccC------------CC-----------CCeeEEeeCCcccccCC-CccCCccChhheEEeeCCC
Confidence 999999999999998520 01 12335666655443322 11233343 3556677
Q ss_pred cEEEEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 604 GYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 604 Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
||.-++++..++++.|++ ..|+++......|..
T Consensus 299 Gfmsv~is~~e~~vvfyD-~~G~~Lhk~~t~kr~ 331 (336)
T KOG2679|consen 299 GFMSVEISHSEARVVFYD-VSGKVLHKWSTSKRS 331 (336)
T ss_pred ceEEEEEecceeEEEEEe-ccCceEEEeeccccc
Confidence 999999999999999998 589999988877653
|
|
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-22 Score=221.68 Aligned_cols=241 Identities=21% Similarity=0.320 Sum_probs=125.2
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC-CccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHH
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA-VDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSD 362 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~-~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~ 362 (639)
.+++++.++||+|+|+|+||+..++ ...|..++|+|+|......+||++++|.+.... ....++.|
T Consensus 61 d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~-----------~~~~~~~~-- 127 (453)
T PF09423_consen 61 DFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDG-----------YFPAYRRI-- 127 (453)
T ss_dssp TTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC--------------HHHHHH--
T ss_pred CeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccC-----------hHHHHHhh--
Confidence 5889999999999999999999853 356788999999876556799999999885321 12334444
Q ss_pred Hhhc-CCCcEEEEcCCccccCCc-----------------------HHH----HHHHH--HhhhhhhcCCceEEecCCCC
Q 006591 363 EVNN-GNVDSVFHIGDISYATGF-----------------------LVE----WDFFL--HQITPVASRVSYMTAIGNHE 412 (639)
Q Consensus 363 ~i~~-~~pDfVl~~GDl~y~~g~-----------------------~~~----wd~f~--~~l~~l~~~vP~~~v~GNHD 412 (639)
.+ .+|||+||+||.+|+++. ... |..+. ..++.+.+.+|++.++.+||
T Consensus 128 --a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHd 205 (453)
T PF09423_consen 128 --AERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHD 205 (453)
T ss_dssp --TT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STT
T ss_pred --hccCCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCce
Confidence 34 689999999999999852 111 22121 34566678999999999999
Q ss_pred cCCCCCCCccCCCC-CCCc-------cccccccccCCCC----CCCCCCeEEEEeCC-EEEEEEeCCCCC----------
Q 006591 413 RDYVNSGSVYSTPD-SGGE-------CGIPYETYFPMPT----PSKDRPWYSIEQAS-VHFTVISTEHDW---------- 469 (639)
Q Consensus 413 ~~~~~~~~~y~~~d-sgge-------~~~~y~~~f~~P~----~~~~~~~Ysfd~G~-v~fi~LDT~~~~---------- 469 (639)
+..+..+..-...+ ..+. ....|.++.+... ......|++|++|+ +.|++||++...
T Consensus 206 i~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~ 285 (453)
T PF09423_consen 206 IGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGD 285 (453)
T ss_dssp TSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE
T ss_pred ecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhcccccccccccc
Confidence 95332211000000 0000 0112333333321 11245789999999 999999997532
Q ss_pred -----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC------------CCCchhHHHHHHHHHHHHh
Q 006591 470 -----------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD------------GFLSVDKFFVKSVEPLLLK 526 (639)
Q Consensus 470 -----------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~------------~~~~~~~~~r~~l~~Ll~~ 526 (639)
-+|.+|++||++.|++ +.++|+|++.-.|+..... .+.+ -...|++|..+|.+
T Consensus 286 ~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g-~~~er~~Ll~~l~~ 361 (453)
T PF09423_consen 286 TCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDG-YPAERQRLLDFLRE 361 (453)
T ss_dssp --HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGG-SHHHHHHHHHHHHH
T ss_pred ccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhh-CHHHHHHHHHHHHh
Confidence 1479999999999996 4589999998888744321 1112 24568999999998
Q ss_pred CCCe--EEEeCccccccee
Q 006591 527 NKVD--LVLFGHVHNYERT 543 (639)
Q Consensus 527 y~Vd--lvlsGH~H~YeRt 543 (639)
.++. ++|+|++|...-.
T Consensus 362 ~~~~~vV~LSGDvH~~~~~ 380 (453)
T PF09423_consen 362 SGIRNVVFLSGDVHASAAS 380 (453)
T ss_dssp TT---EEEEE-SSSSEEEE
T ss_pred hCCCCEEEEecCcchheee
Confidence 8875 7899999996654
|
|
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=208.02 Aligned_cols=194 Identities=20% Similarity=0.232 Sum_probs=132.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~~~vP~~ 405 (639)
|||++++|+|..........+ ...+...++++++.+++.+||+|+++||+++.... ..+|+.+.+.++.+ .+|++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~-~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~ 77 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRY-YRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVH 77 (267)
T ss_pred CeEEEEeccccccCCCcccch-HHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEE
Confidence 699999999966432111111 11245677888888888889999999999965432 14566666666554 68999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC-----------------
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----------------- 468 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----------------- 468 (639)
+++||||....... .+.. +.....+..||+|++++++||+||+...
T Consensus 78 ~v~GNHD~~~~~~~--------------~~~~---~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~ 140 (267)
T cd07396 78 HVLGNHDLYNPSRE--------------YLLL---YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADD 140 (267)
T ss_pred EecCccccccccHh--------------hhhc---ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHH
Confidence 99999998522100 0000 1111123569999999999999998531
Q ss_pred -----------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCe
Q 006591 469 -----------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVD 530 (639)
Q Consensus 469 -----------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vd 530 (639)
...+.+|++||++.|+++.. +..++||++|+|++.... ........++.+.++++++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~-~~~~~~~~~~~~~~ll~~~~~V~ 218 (267)
T cd07396 141 NSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPEST-SPHGLLWNHEEVLSILRAYGCVK 218 (267)
T ss_pred hchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCC-CccccccCHHHHHHHHHhCCCEE
Confidence 13468999999999998643 234589999999876542 1111112257889999996 899
Q ss_pred EEEeCccccccee
Q 006591 531 LVLFGHVHNYERT 543 (639)
Q Consensus 531 lvlsGH~H~YeRt 543 (639)
++|+||+|.++..
T Consensus 219 ~v~~GH~H~~~~~ 231 (267)
T cd07396 219 ACISGHDHEGGYA 231 (267)
T ss_pred EEEcCCcCCCCcc
Confidence 9999999998753
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=205.96 Aligned_cols=228 Identities=14% Similarity=0.137 Sum_probs=155.7
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
||++++|+|.+..... ..........++++++.+++. +||+|+++||+++. +...+|+.+.+.++.+ .+|++.
T Consensus 1 r~~~iSDlH~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~~ 75 (240)
T cd07402 1 LLAQISDLHLRADGEG--ALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVYL 75 (240)
T ss_pred CEEEEeCCccCCCCcc--eecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEEE
Confidence 6999999998754211 011112356678888887765 99999999999965 4556778888877766 789999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHHH
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDW----WLNSEQYKWIQKD 482 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~----~~g~~Q~~WL~~~ 482 (639)
++||||... .+.+.|..........+|+|+.++++||+||+.... ....+|++||++.
T Consensus 76 v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~ 137 (240)
T cd07402 76 LPGNHDDRA------------------AMRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAA 137 (240)
T ss_pred eCCCCCCHH------------------HHHHhhccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHH
Confidence 999999731 112222111001234688999999999999986432 2468999999999
Q ss_pred HhhccCCCCCeEEEEeccCCccCCC-CCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCCC
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLD-GFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDN 560 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~-~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~ 560 (639)
|++.. ..++|+++|+|++.... .........++.+.+++.++ +|+++|+||.|......
T Consensus 138 L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~---------------- 198 (240)
T cd07402 138 LAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS---------------- 198 (240)
T ss_pred HHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE----------------
Confidence 99853 34588999999976542 11111112367899999999 99999999999976532
Q ss_pred CCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEe
Q 006591 561 GIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHAT 611 (639)
Q Consensus 561 G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~ 611 (639)
.++..++++|+.|..+... ++-.......+||..+.+-
T Consensus 199 ---------~~g~~~~~~gs~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 236 (240)
T cd07402 199 ---------WGGIPLLTAPSTCHQFAPD----LDDFALDALAPGYRALSLH 236 (240)
T ss_pred ---------ECCEEEEEcCcceeeecCC----CCcccccccCCCCcEEEEe
Confidence 1245678888888754322 1222223345788888773
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-20 Score=191.53 Aligned_cols=192 Identities=18% Similarity=0.211 Sum_probs=127.6
Q ss_pred EEEEecCCCCCCCCCCccccCcChHH-HHHHHHHHhhcCCCcEEEEcCCccccCC--------cHHHHHHHHHhhhhhhc
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLS-VVKAMSDEVNNGNVDSVFHIGDISYATG--------FLVEWDFFLHQITPVAS 400 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~-~~~~l~~~i~~~~pDfVl~~GDl~y~~g--------~~~~wd~f~~~l~~l~~ 400 (639)
|++++|+|.+.... .... ..+.+.+.+++.+||+|+++||+++... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~--------~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T cd07401 2 FVHISDIHVSSFHP--------PNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSV 73 (256)
T ss_pred EEEecccccCCcCc--------hhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCC
Confidence 78999999875421 1111 1244566677789999999999996532 24578888887765432
Q ss_pred --CCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEE--EeCCEEEEEEeCCCC--------
Q 006591 401 --RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSI--EQASVHFTVISTEHD-------- 468 (639)
Q Consensus 401 --~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysf--d~G~v~fi~LDT~~~-------- 468 (639)
..|++.++||||...... .+. ....|.++...... ...+|.+ +.|+++||+|||...
T Consensus 74 ~~~~p~~~v~GNHD~~~~~~------~~~---~~~~~~~y~~~~~~--~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~ 142 (256)
T cd07401 74 INKEKWFDIRGNHDLFNIPS------LDS---ENNYYRKYSATGRD--GSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFN 142 (256)
T ss_pred CCcceEEEeCCCCCcCCCCC------ccc---hhhHHHHhheecCC--CccceEEEecCCCEEEEEEcCccCCCCCCCCc
Confidence 589999999999831110 000 01123333222111 1223333 359999999999642
Q ss_pred --CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecc
Q 006591 469 --WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSV 546 (639)
Q Consensus 469 --~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~ 546 (639)
.....+|++||++.|++.. +.+++||++|+|++....... .. ...+.++|++++|+++|+||.|.+++-.|+
T Consensus 143 ~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~~---~~-~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 143 FFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPSA---KS-SSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred eeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCCc---ch-hHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 2356899999999999753 346899999999965332111 11 223999999999999999999999996664
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=188.48 Aligned_cols=250 Identities=12% Similarity=0.121 Sum_probs=152.3
Q ss_pred EECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHh
Q 006591 317 FRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQ 394 (639)
Q Consensus 317 F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~ 394 (639)
.++.+.. .++++|++++|+|....... ..........++++++.+++ .+||+|+++||+++. +...+++.+.+.
T Consensus 5 ~~~~~~~-~~~~~i~~iSD~Hl~~~~~~--~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~-~~~~~~~~~~~~ 80 (275)
T PRK11148 5 LTLPLAG-EARVRILQITDTHLFADEHE--TLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQD-HSSEAYQHFAEG 80 (275)
T ss_pred cccccCC-CCCEEEEEEcCcccCCCCCC--ceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCC-CCHHHHHHHHHH
Confidence 3454443 37899999999997432110 00011124567777777654 479999999999964 556678888887
Q ss_pred hhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----CC
Q 006591 395 ITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----WW 470 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----~~ 470 (639)
++.+ .+|+++++||||.... +.+.+... +....++.+..++++||+||+... ..
T Consensus 81 l~~l--~~Pv~~v~GNHD~~~~------------------~~~~~~~~--~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 81 IAPL--RKPCVWLPGNHDFQPA------------------MYSALQDA--GISPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred Hhhc--CCcEEEeCCCCCChHH------------------HHHHHhhc--CCCccceEEecCCEEEEEecCCCCCCcCCE
Confidence 7766 6899999999997310 11111100 001123334455699999999642 23
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccC
Q 006591 471 LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFR 548 (639)
Q Consensus 471 ~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~ 548 (639)
.+.+|++||++.|+++. ....||++|||+..... ..........++|.+++++| +|+++|+||+|......
T Consensus 139 l~~~ql~wL~~~L~~~~---~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~---- 211 (275)
T PRK11148 139 LSEYQLEWLERKLADAP---ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD---- 211 (275)
T ss_pred eCHHHHHHHHHHHhhCC---CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce----
Confidence 57899999999999753 22355666665543322 11111112357899999998 89999999999854321
Q ss_pred CeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEe-CCEEEEEEEECCC
Q 006591 549 NKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHAT-KQEIQLEFVNADT 624 (639)
Q Consensus 549 ~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~-~~~L~~e~~~~~d 624 (639)
.+|..++++++.+...... .... .......||..++++ ++.+..+.++..+
T Consensus 212 ---------------------~~gi~~~~~ps~~~q~~~~---~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~ 263 (275)
T PRK11148 212 ---------------------WNGRRLLATPSTCVQFKPH---CTNF-TLDTVAPGWRELELHADGSLETEVHRLAD 263 (275)
T ss_pred ---------------------ECCEEEEEcCCCcCCcCCC---CCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCC
Confidence 1234456666655432111 1111 111234699999995 5568777776544
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-20 Score=195.09 Aligned_cols=291 Identities=22% Similarity=0.331 Sum_probs=188.8
Q ss_pred CC-ceeEEeeccCCCCceEEEEEeCC--------CCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 215 KP-LYGHLSSVDSTGTSMRLTWVSGD--------KEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 215 ~P-~~~~l~~~~~~~~sm~v~W~T~~--------~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.| .+...+.++.. ..-.|.|+.-+ +....+||.++.. .+++. .-+++..+|+ ..+
T Consensus 36 rpaF~~GVaSGDp~-~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~--f~~iv------r~gt~~a~p~-------~dh 99 (522)
T COG3540 36 RPAFTHGVASGDPT-ATSVVIWTRLDPEPLNGGRPVPVIWEVSTDEN--FSNIV------RKGTVIASPE-------LDH 99 (522)
T ss_pred CCccccccccCCCC-CCeEEEEEccCCccccCCCCcceEEEecCCcc--HHHHH------hcCCccCCcc-------cCc
Confidence 45 44455666654 44588898665 3445777775433 22221 1122223344 258
Q ss_pred EEEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN 365 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~ 365 (639)
.+++.++||+|++.|+||+..++ .-|..++|+|+|+.+ ..++++.+||........ +-..+. +.+.
T Consensus 100 tv~v~~~gL~P~~~yfYRf~~~~-~~spvGrtrTapa~~-~~i~~~~fa~ascQ~~~~--------gy~~aY----~~ma 165 (522)
T COG3540 100 TVHVDLRGLSPDQDYFYRFKAGD-ERSPVGRTRTAPAPG-RAIRFVWFADASCQGWEI--------GYMTAY----KTMA 165 (522)
T ss_pred eEEEeccCCCCCceEEEEEeeCC-ccccccccccCCCCC-Ccchhhhhhhcccccccc--------chhHHH----HHHH
Confidence 89999999999999999998764 357899999999986 678888888876544321 122333 3445
Q ss_pred cCCCcEEEEcCCccccCCcHH-----------------------------HHHHHH--HhhhhhhcCCceEEecCCCCcC
Q 006591 366 NGNVDSVFHIGDISYATGFLV-----------------------------EWDFFL--HQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 366 ~~~pDfVl~~GDl~y~~g~~~-----------------------------~wd~f~--~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
+.+|||+||.||.+|+.|-.. +|..+. ..++...+..|+++.|.+||..
T Consensus 166 ~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~ 245 (522)
T COG3540 166 KEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVA 245 (522)
T ss_pred hcCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEecccccc
Confidence 678999999999999975321 122221 2455566789999999999997
Q ss_pred CCCCCCccCCCCC-CCcc---------ccccccccCCCCCC---CCCCeEEEEeCC-EEEEEEeCCCCC-----------
Q 006591 415 YVNSGSVYSTPDS-GGEC---------GIPYETYFPMPTPS---KDRPWYSIEQAS-VHFTVISTEHDW----------- 469 (639)
Q Consensus 415 ~~~~~~~y~~~ds-gge~---------~~~y~~~f~~P~~~---~~~~~Ysfd~G~-v~fi~LDT~~~~----------- 469 (639)
.+.....-.. |+ -.+. ..+|.++.++.... ....|.+|.||+ +.|.+||++.+.
T Consensus 246 NN~~~~~~~n-D~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~ 324 (522)
T COG3540 246 NNWSNSIDEN-DSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPP 324 (522)
T ss_pred cccccccccc-CCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcc
Confidence 5433211111 22 1111 12343333322111 246799999999 689999997543
Q ss_pred -----------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCcc----CC---CC------CCchhHHHHHHHHHHHH
Q 006591 470 -----------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYS----SL---DG------FLSVDKFFVKSVEPLLL 525 (639)
Q Consensus 470 -----------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~----~~---~~------~~~~~~~~r~~l~~Ll~ 525 (639)
-.|..|.+||+..|.+ +++.|+|+..-.|+-- .. .. .......-|+.|...++
T Consensus 325 ~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~ 401 (522)
T COG3540 325 NCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIA 401 (522)
T ss_pred hhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHH
Confidence 1479999999999996 7899999988877621 11 00 00111344889999999
Q ss_pred hCCCe--EEEeCcccc
Q 006591 526 KNKVD--LVLFGHVHN 539 (639)
Q Consensus 526 ~y~Vd--lvlsGH~H~ 539 (639)
..++. ++|+|++|.
T Consensus 402 ~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 402 DRKIRNTVVLTGDVHY 417 (522)
T ss_pred hcCCCCcEEEechhHH
Confidence 99886 899999997
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=181.73 Aligned_cols=158 Identities=20% Similarity=0.181 Sum_probs=118.3
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh-cCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA-SRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~-~~vP~~~ 406 (639)
|||++++|+|...... .......+++|++.+++.+||+|+++||+++......+|+.+.+.++.+. ..+|+++
T Consensus 1 f~~~~~~D~q~~~~~~------~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 74 (214)
T cd07399 1 FTLAVLPDTQYYTESY------PEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSV 74 (214)
T ss_pred CEEEEecCCCcCCcCC------HHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEE
Confidence 6899999999764311 01123466777887777899999999999976554678999999888886 6799999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||. ++.+|+ ....+|++||++.|++.
T Consensus 75 ~~GNHD~----------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~ 104 (214)
T cd07399 75 LAGNHDL----------------------------------------------VLALEF----GPRDEVLQWANEVLKKH 104 (214)
T ss_pred ECCCCcc----------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC
Confidence 9999993 122232 23489999999999974
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCch-----hHHHHHHHHHHHHhC-CCeEEEeCcccccceee
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSV-----DKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTC 544 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~-----~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~ 544 (639)
+ ..++||++|+|++......... ....++.|++|++++ +|+++|+||+|.+.+..
T Consensus 105 ~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 105 P---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 2 3458999999998655422211 123356788999999 79999999999998864
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=174.20 Aligned_cols=183 Identities=15% Similarity=0.192 Sum_probs=123.2
Q ss_pred HHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHH--------HHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccC
Q 006591 354 LSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLV--------EWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYS 423 (639)
Q Consensus 354 ~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~--------~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~ 423 (639)
...++++++.+++. +|||||++||+++...... .+..+.+.++.....+|+++++||||....+....
T Consensus 52 ~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~-- 129 (296)
T cd00842 52 WRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP-- 129 (296)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC--
Confidence 46677777777665 9999999999997654321 24556677777778999999999999853221100
Q ss_pred CCCCCCccccccccccC--CCCCC----CCCCeEEEE-eCCEEEEEEeCCCCC-----------CCCHHHHHHHHHHHhh
Q 006591 424 TPDSGGECGIPYETYFP--MPTPS----KDRPWYSIE-QASVHFTVISTEHDW-----------WLNSEQYKWIQKDLAS 485 (639)
Q Consensus 424 ~~dsgge~~~~y~~~f~--~P~~~----~~~~~Ysfd-~G~v~fi~LDT~~~~-----------~~g~~Q~~WL~~~La~ 485 (639)
..........+...|. ++... ....||++. .++++||+|||.... ....+|++||+++|++
T Consensus 130 -~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~ 208 (296)
T cd00842 130 -NNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQE 208 (296)
T ss_pred -cccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHH
Confidence 0000000011112221 22211 135689998 899999999997421 2357999999999998
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCC--CeEEEeCccccccee
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNK--VDLVLFGHVHNYERT 543 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~--VdlvlsGH~H~YeRt 543 (639)
+.+.+ ..++|++|+|+....... .....+.+.+|+++|+ |.++|+||+|..+..
T Consensus 209 a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 209 AEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 75333 457889999997654311 1355788999999996 778999999997754
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-16 Score=149.32 Aligned_cols=195 Identities=23% Similarity=0.242 Sum_probs=104.9
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHH-HhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFL-HQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~-~~l~~l~~~vP~~~ 406 (639)
|||+++||+|...... .. ....+.+.....++|+||++||+++.......+.... ..........|+++
T Consensus 1 ~ri~~isD~H~~~~~~---------~~-~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD---------SD-AFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYF 70 (200)
T ss_dssp EEEEEEEBBTTTHHHH---------CH-HHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred CeEEEEcCCCCCCcch---------hH-HHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccc
Confidence 6999999999763210 01 2445555556789999999999998766554444322 12333456899999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-C-CCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-P-SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-~-~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
++||||+......... ............. . ...+...........+..............+..|+...+.
T Consensus 71 ~~GNHD~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (200)
T PF00149_consen 71 ILGNHDYYSGNSFYGF--------YDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLL 142 (200)
T ss_dssp EE-TTSSHHHHHHHHH--------HHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHH
T ss_pred cccccccceecccccc--------ccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccc
Confidence 9999998521100000 0000000000000 0 0000001122222222222221111222333333333322
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCc--hhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~--~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
...+...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 143 ~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 143 LLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 222345678999999999877642211 01234788999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.9e-16 Score=157.60 Aligned_cols=161 Identities=17% Similarity=0.176 Sum_probs=106.7
Q ss_pred cCCCcEEEEcCCccccCC--cHHHHH----HHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCcccccccccc
Q 006591 366 NGNVDSVFHIGDISYATG--FLVEWD----FFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYF 439 (639)
Q Consensus 366 ~~~pDfVl~~GDl~y~~g--~~~~wd----~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f 439 (639)
..+||+|+++||+++.+. ...+|. +|.+.+.++....|++.++||||+.+... ........|+++|
T Consensus 43 ~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~--------~~~~~~~rf~~~F 114 (257)
T cd08163 43 QLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNG--------VVLPVRQRFEKYF 114 (257)
T ss_pred hcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCC--------CCHHHHHHHHHHh
Confidence 368999999999997532 123453 44444444333579999999999854211 0001123566677
Q ss_pred CCCCCCCCCCeEEEEeCCEEEEEEeCCCC-----CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CCC---
Q 006591 440 PMPTPSKDRPWYSIEQASVHFTVISTEHD-----WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GFL--- 510 (639)
Q Consensus 440 ~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~-----~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~~--- 510 (639)
+. ..|.|++|+++||+||+... .....+|.+||++.|+.... ...+||++|+|+|.... ...
T Consensus 115 g~-------~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~p~ILl~H~Plyr~~~~~cg~~r 185 (257)
T cd08163 115 GP-------TSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK--SKPRILLTHVPLYRPPNTSCGPLR 185 (257)
T ss_pred CC-------CceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC--CCcEEEEeccccccCCCCCCCCcc
Confidence 52 35899999999999999632 23457899999999986432 23489999999986542 100
Q ss_pred --------chhH----HH-HHHHHHHHHhCCCeEEEeCccccccee
Q 006591 511 --------SVDK----FF-VKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 511 --------~~~~----~~-r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
.... .+ .+.-..||++.+..+||+||+|.|-..
T Consensus 186 e~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 186 ESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred ccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 0000 01 234456788889999999999998765
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=148.94 Aligned_cols=162 Identities=17% Similarity=0.231 Sum_probs=105.0
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHH-HHHHHHHhhhhhh-cCCce
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLV-EWDFFLHQITPVA-SRVSY 404 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~-~wd~f~~~l~~l~-~~vP~ 404 (639)
.+||++++|+|.+....... .......+.+.+.+.+++.+||+|+++||+++...... .++.+.+.++++. ..+|+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~ 79 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCE--GCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPW 79 (199)
T ss_pred ceEEEEEeeecccCCCCCCC--cchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCE
Confidence 58999999999876432100 00011344555655566789999999999998765432 2444445555543 37999
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
++++||||.. -.....|++||+++|+
T Consensus 80 ~~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~ 105 (199)
T cd07383 80 AATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSA 105 (199)
T ss_pred EEECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHH
Confidence 9999999920 1234689999999999
Q ss_pred hcc--CCCCCeEEEEeccCCccCCCCC-----------C-chhHHHHH-HHHHHHHhCCCeEEEeCcccccceee
Q 006591 485 SVD--RSKTPWLIFAGHRPMYSSLDGF-----------L-SVDKFFVK-SVEPLLLKNKVDLVLFGHVHNYERTC 544 (639)
Q Consensus 485 ~~~--r~~~pwvIV~~H~P~y~~~~~~-----------~-~~~~~~r~-~l~~Ll~~y~VdlvlsGH~H~YeRt~ 544 (639)
+.. +....+.++++|+|+....... . ........ .+..+.+..+|+++|+||+|.++...
T Consensus 106 ~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 106 ALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 863 2344678999999986532100 0 00011122 33444566799999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-15 Score=149.45 Aligned_cols=191 Identities=17% Similarity=0.151 Sum_probs=116.8
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+.+++|+|....-........+.+.+..+++.+.+++. +||+|+++||+++. +...+....++.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCeEEE
Confidence 36789999763210000112233456666766665544 89999999999953 3333333444444443 3478999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCC-CCCeEEEEeCCEEEEEEeCCC----CC-------------
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSK-DRPWYSIEQASVHFTVISTEH----DW------------- 469 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~-~~~~Ysfd~G~v~fi~LDT~~----~~------------- 469 (639)
+||||+.. .. ...+++.+.- .+. -....++.++++.|+.++... .+
T Consensus 78 ~GNHD~~~-~~-------------~~~~~~~l~~--~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
T cd07393 78 KGNHDYWW-GS-------------ASKLRKALEE--SRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDE 141 (232)
T ss_pred eCCccccC-CC-------------HHHHHHHHHh--cCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHH
Confidence 99999721 10 0111111110 000 000235567889999876311 11
Q ss_pred CCCHHHHHHHHHHHhhccCCC-CCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeeccc
Q 006591 470 WLNSEQYKWIQKDLASVDRSK-TPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVF 547 (639)
Q Consensus 470 ~~g~~Q~~WL~~~La~~~r~~-~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~ 547 (639)
....+|++||++.|+++.... ..++|+++|+|++.... . .+.+..++++++|+++|+||+|.+++..|+.
T Consensus 142 ~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~---~-----~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~ 212 (232)
T cd07393 142 KIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG---D-----DSPISKLIEEYGVDICVYGHLHGVGRDRAIN 212 (232)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC---C-----HHHHHHHHHHcCCCEEEECCCCCCccccccc
Confidence 013569999999999764322 24799999999876542 1 2466788899999999999999999887663
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.5e-14 Score=150.54 Aligned_cols=94 Identities=20% Similarity=0.353 Sum_probs=72.6
Q ss_pred CCCeEEEE-eCCEEEEEEeCCCC-----CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCC-----CchhHH
Q 006591 447 DRPWYSIE-QASVHFTVISTEHD-----WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-----LSVDKF 515 (639)
Q Consensus 447 ~~~~Ysfd-~G~v~fi~LDT~~~-----~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-----~~~~~~ 515 (639)
+..||+|+ .++++||+|||... ....++|++||+++|++. +.+++||++|||++...... ......
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 35699999 89999999999642 245799999999999963 34679999999998654311 111122
Q ss_pred HHHHHHHHHHhC-CCeEEEeCccccccee
Q 006591 516 FVKSVEPLLLKN-KVDLVLFGHVHNYERT 543 (639)
Q Consensus 516 ~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt 543 (639)
..++|.++|++| +|.++|+||.|....+
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999999 8999999999987654
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=144.16 Aligned_cols=186 Identities=19% Similarity=0.225 Sum_probs=126.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
++|+.++|.|..... ......+.++++.++..+||+|+++||+++. +...+++...+.++......|++++
T Consensus 1 ~~i~~isD~H~~~~~--------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~v 71 (301)
T COG1409 1 MRIAHISDLHLGALG--------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVV 71 (301)
T ss_pred CeEEEEecCcccccc--------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEee
Confidence 589999999987310 1235678888888888899999999999976 7777788777777755557899999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEe-CCEEEEEEeCCCC----CCCCHHHHHHHHHH
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQ-ASVHFTVISTEHD----WWLNSEQYKWIQKD 482 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~-G~v~fi~LDT~~~----~~~g~~Q~~WL~~~ 482 (639)
+||||....+ ...+...+.... ..+-.... ++++++.+|+... ...+..|++||++.
T Consensus 72 pGNHD~~~~~--------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~ 133 (301)
T COG1409 72 PGNHDARVVN--------------GEAFSDQFFNRY----AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEA 133 (301)
T ss_pred CCCCcCCchH--------------HHHhhhhhcccC----cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHH
Confidence 9999985221 112222221110 01111112 6789999999753 34689999999999
Q ss_pred HhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCC--CeEEEeCccccc
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNK--VDLVLFGHVHNY 540 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~--VdlvlsGH~H~Y 540 (639)
|++........+|++.|+|+.................+..++..++ |+++|+||.|..
T Consensus 134 l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 134 LAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 9975433112456767777665443222222233456777788887 999999999986
|
|
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=133.42 Aligned_cols=167 Identities=18% Similarity=0.122 Sum_probs=103.1
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
++++||+|... ..++. ..+++.++|+|+++||+++. +...+...+ +.++. ...|+++++|
T Consensus 1 i~~~sD~H~~~--------------~~~~~--~~~~~~~~D~vv~~GDl~~~-~~~~~~~~~-~~l~~--~~~p~~~v~G 60 (188)
T cd07392 1 ILAISDIHGDV--------------EKLEA--IILKAEEADAVIVAGDITNF-GGKEAAVEI-NLLLA--IGVPVLAVPG 60 (188)
T ss_pred CEEEEecCCCH--------------HHHHH--HHhhccCCCEEEECCCccCc-CCHHHHHHH-HHHHh--cCCCEEEEcC
Confidence 57899999642 11222 33456789999999999965 333333333 44443 3689999999
Q ss_pred CCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHH
Q 006591 410 NHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD------WWLNSEQYKWIQKDL 483 (639)
Q Consensus 410 NHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~------~~~g~~Q~~WL~~~L 483 (639)
|||...... ......... . -..+.+++++|+.+++... ....++|++|+ +.|
T Consensus 61 NHD~~~~~~---------------~~~~~~~~~----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l 118 (188)
T cd07392 61 NCDTPEILG---------------LLTSAGLNL----H--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRL 118 (188)
T ss_pred CCCCHHHHH---------------hhhcCcEec----C--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhh
Confidence 999631100 000000000 0 1245678899999987421 13457899998 444
Q ss_pred hhccCCCCCeEEEEeccCCccCC-CCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 484 ASVDRSKTPWLIFAGHRPMYSSL-DGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 484 a~~~r~~~pwvIV~~H~P~y~~~-~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+. ...+.+|+++|+|++... ...........+.+.+++++++++++|+||+|.-.
T Consensus 119 ~~---~~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 119 NN---LLAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hc---cCCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 43 233458999999997631 11111001124678889999999999999999854
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.5e-13 Score=139.86 Aligned_cols=183 Identities=17% Similarity=0.162 Sum_probs=110.8
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
||++++|+|..... .+....++++++.+.+.++|+|+++||++... .+...+++.+..+ ...|++.++
T Consensus 1 ki~~iSDlH~~~~~--------~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~ 68 (239)
T TIGR03729 1 KIAFSSDLHIDLNH--------FDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNA 68 (239)
T ss_pred CEEEEEeecCCCCC--------CCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEEC
Confidence 58999999974211 11234577788877778899999999999542 2223444444432 468999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC--------------------
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD-------------------- 468 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~-------------------- 468 (639)
||||+..... + ..+.+.+. +. .-.+.++.+..++++|++++...+
T Consensus 69 GNHD~~~~~~---~----------~~~~~~~~-~~-~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~ 133 (239)
T TIGR03729 69 GNHDMLKDLT---Y----------EEIESNDS-PL-YLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFW 133 (239)
T ss_pred CCCCCCCCCC---H----------HHHHhccc-hh-hhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEE
Confidence 9999731110 0 00111110 00 001223333346677777773111
Q ss_pred ------C-----CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-------CCCchh-HHHHHHHHHHHHhCCC
Q 006591 469 ------W-----WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-------GFLSVD-KFFVKSVEPLLLKNKV 529 (639)
Q Consensus 469 ------~-----~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-------~~~~~~-~~~r~~l~~Ll~~y~V 529 (639)
+ ....+|++||++.|++... ..+|+++|+|+..... .+.... ....+.|.+++++++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v 210 (239)
T TIGR03729 134 FDRRIKRPMSDPERTAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEI 210 (239)
T ss_pred eecccCCCCChHHHHHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCC
Confidence 1 1236789999999987532 2389999999854210 111111 1113788999999999
Q ss_pred eEEEeCcccccc
Q 006591 530 DLVLFGHVHNYE 541 (639)
Q Consensus 530 dlvlsGH~H~Ye 541 (639)
+++|+||.|.-.
T Consensus 211 ~~~i~GH~H~~~ 222 (239)
T TIGR03729 211 KDVIFGHLHRRF 222 (239)
T ss_pred CEEEECCccCCC
Confidence 999999999864
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.8e-13 Score=125.79 Aligned_cols=127 Identities=22% Similarity=0.243 Sum_probs=91.3
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcC-CceEEec
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASR-VSYMTAI 408 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~-vP~~~v~ 408 (639)
|+.++|.|.+........ .....++++.+.+.+.++|+|+++||+++. +...+|+.+.+.++.+... .|++.++
T Consensus 1 il~isD~Hl~~~~~~~~~----~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v~ 75 (144)
T cd07400 1 ILHLSDLHFGPERKPELL----ALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVVP 75 (144)
T ss_pred CeEeCccCCCCCcchhHH----HHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEeC
Confidence 578999998764321110 111224567777778899999999999975 5566777777777776533 5999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||.
T Consensus 76 GNHD~--------------------------------------------------------------------------- 80 (144)
T cd07400 76 GNHDV--------------------------------------------------------------------------- 80 (144)
T ss_pred CCCeE---------------------------------------------------------------------------
Confidence 99992
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
|+++|+|++......... ...++.+.+++++++++++++||+|.....
T Consensus 81 ------iv~~Hhp~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ------IVVLHHPLVPPPGSGRER-LLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ------EEEecCCCCCCCcccccc-CCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 888999997654311110 013677999999999999999999997643
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.3e-13 Score=132.51 Aligned_cols=204 Identities=15% Similarity=0.172 Sum_probs=120.7
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
++||++++|+|..... ....++++++.+.+.+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 1 ~~~i~~~sDlH~~~~~----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 1 GLRIAHLSDLHLGPFV----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CCEEEEEeecCCCccC----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 4799999999986431 1345677888888889999999999997654322 345566666656789999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||+....... + ....+...+.. -.+....++.++..+.++.-... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~-~----------~~~l~~~~v~~--L~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEEN-W----------IEALESAGITV--LRNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHH-H----------HHHHHHcCCEE--eecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 99999985321100 0 00000001100 01234556666655544431111 12234667777654
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCe--ecCCCccCCCCCcc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNK--CMGIPTKDDNGIDT 564 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~--~~~~~~~d~~G~~~ 564 (639)
+ +..+.|++.|.|.+.. . +.+.++|++++||+|..|...|..... |.... +-..|.
T Consensus 132 ~--~~~~~I~l~H~P~~~~-------------~----~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~-~~~~G~-- 189 (223)
T cd07385 132 D--EDDPNILLAHQPDTAE-------------E----AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLAR-PYDYGL-- 189 (223)
T ss_pred C--CCCCEEEEecCCChhH-------------H----hcccCccEEEeccCCCCEEeccccccccchhhcC-cccceE--
Confidence 3 3456899999985311 1 256789999999999999776654321 11111 122343
Q ss_pred ccCCCCCCcEEEEeCCCCC
Q 006591 565 YDHSNYTAPVHAIIGMAGF 583 (639)
Q Consensus 565 y~~~~~~gpv~iv~G~aG~ 583 (639)
|. ..+..+||..|.|..
T Consensus 190 ~~--~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 190 YR--KGGSQLYVSRGLGTW 206 (223)
T ss_pred EE--ECCEEEEEcCCccCC
Confidence 22 124577887777754
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.7e-12 Score=126.03 Aligned_cols=178 Identities=13% Similarity=0.101 Sum_probs=110.1
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
...|+++++|+|.. ...++++.+.+++.++|+|+++||+++......+...+++.+..+ ..|++
T Consensus 3 ~~~kIl~iSDiHgn--------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 3 TVRYVLATSNPKGD--------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred ceeEEEEEEecCCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 35799999999943 456777877776778999999999997542344455566655443 57999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC-CCCCCeEEEEe-CCEEEEEEeCCCCC--CCCHHHH----H
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP-SKDRPWYSIEQ-ASVHFTVISTEHDW--WLNSEQY----K 477 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~-~~~~~~Ysfd~-G~v~fi~LDT~~~~--~~g~~Q~----~ 477 (639)
+++||||..... + ....|......|.. .-... ...+ |+++|+.++..... ...++|. .
T Consensus 67 ~V~GNhD~~v~~----~--------l~~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLWE----Y--------LREAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHHH----H--------HHHHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 999999963000 0 00011100001110 00111 2344 66999999865432 2345552 5
Q ss_pred HHHH-HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccc
Q 006591 478 WIQK-DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVH 538 (639)
Q Consensus 478 WL~~-~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H 538 (639)
||.+ .|+...+...+..|+++|+|++..+... ...+.+..++++++..+++|||.|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 2222212233458999999999874211 124678889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-12 Score=137.09 Aligned_cols=93 Identities=19% Similarity=0.271 Sum_probs=66.4
Q ss_pred CCeEEEE-eCCE--EEEEEeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CC---
Q 006591 448 RPWYSIE-QASV--HFTVISTEHD-----------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GF--- 509 (639)
Q Consensus 448 ~~~Ysfd-~G~v--~fi~LDT~~~-----------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~--- 509 (639)
..||+|+ .|++ |||+||+... ...+.+|++||+++|+.+.. +.+++|++.|+|+.+... ..
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 3599999 5845 9999998641 12579999999999998642 457788888888875221 10
Q ss_pred C---------chhHHHHHHHHHHHHhC-CCeEEEeCcccccc
Q 006591 510 L---------SVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYE 541 (639)
Q Consensus 510 ~---------~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~Ye 541 (639)
. ..+.....+|..+|++| +|.++|+||.|...
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 0 00111124799999999 79999999999643
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.2e-12 Score=127.83 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=114.4
Q ss_pred EEEEEecCCCCCCCCCCccc-cCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cHHHHHHHHHhhhhhh-cCCceE
Q 006591 329 KFLAYGDMGKAPRDASTEHY-IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FLVEWDFFLHQITPVA-SRVSYM 405 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~-~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~~~wd~f~~~l~~l~-~~vP~~ 405 (639)
||++++|+|.+......... ........++++.+.+.+.++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999988543211100 01123567888888888889999999999997643 2344566667776654 478999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCC--CCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPM--PTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDL 483 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~--P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~L 483 (639)
+++||||....... +.. ...+...... ...........++.+++.|+.++..... ....+.++++..+
T Consensus 81 ~~~GNHD~~~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSP-------LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCcccccc--ccc-------hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 99999998532110 000 0000000000 0000011122334456788888753221 1233444445555
Q ss_pred hhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 484 ASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 484 a~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
... .+....|++.|.|+.......... .......+...++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 543 344568999999986544211100 12334456678999999999999764
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.37 E-value=8e-13 Score=105.70 Aligned_cols=61 Identities=36% Similarity=0.626 Sum_probs=41.5
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEE-eCCEEEEEEEECCCCeEEEEE
Q 006591 571 TAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRKVEDSF 631 (639)
Q Consensus 571 ~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~v~D~f 631 (639)
++|||||+|+||+.++.+..++|+|+++|..+|||.+|++ |.++|++||+++.+|+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 3799999999999888888888999999999999999996 899999999999999999998
|
|
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.4e-11 Score=127.82 Aligned_cols=172 Identities=14% Similarity=0.116 Sum_probs=102.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+++|+++++|+|.+... ....++++++.+++.+||+|+++||+++.. ....++.+.+.++.+.+..|++
T Consensus 48 ~~~rI~~lSDlH~~~~~----------~~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv~ 116 (271)
T PRK11340 48 APFKILFLADLHYSRFV----------PLSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPTF 116 (271)
T ss_pred CCcEEEEEcccCCCCcC----------CHHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCEE
Confidence 57999999999975321 134567777777788999999999999632 2223456667777776678999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-CCCCCCeEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-PSKDRPWYSIEQAS--VHFTVISTEHDWWLNSEQYKWIQKD 482 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-~~~~~~~Ysfd~G~--v~fi~LDT~~~~~~g~~Q~~WL~~~ 482 (639)
+++||||+...... ...+.+.+..-. .--.+....+..++ +.++.++.... +... ..+.
T Consensus 117 ~V~GNHD~~~~~~~------------~~~~~~~l~~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~ 178 (271)
T PRK11340 117 ACFGNHDRPVGTEK------------NHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPA 178 (271)
T ss_pred EecCCCCcccCccc------------hHHHHHHHHhcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHh
Confidence 99999997421100 001111110000 00013344555543 55666653211 1111 1122
Q ss_pred HhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccC
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFR 548 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~ 548 (639)
++ + ....|++.|.|-+- +.+.+.++||+||||+|.-|-..|..+
T Consensus 179 ~~----~-~~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 179 SE----A-NLPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred cC----C-CCCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccC
Confidence 22 1 23589999999531 123467899999999999997767543
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=9e-12 Score=119.51 Aligned_cols=146 Identities=18% Similarity=0.144 Sum_probs=88.6
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
|+++||+|.+.... .. .+.+.+...++|+|+++||+++... ..++.. .........|++.++|
T Consensus 1 ~~~iSDlH~~~~~~----------~~---~~~~~~~~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~G 63 (166)
T cd07404 1 IQYLSDLHLEFEDN----------LA---DLLNFPIAPDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPG 63 (166)
T ss_pred CceEccccccCccc----------cc---cccccCCCCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCC
Confidence 57899999764211 00 1113335578999999999996532 233322 2223345789999999
Q ss_pred CCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCC-CCHHHHHHHHHHHhhccC
Q 006591 410 NHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWW-LNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 410 NHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~-~g~~Q~~WL~~~La~~~r 488 (639)
|||+. +.|+...-..++. .++++.+|+.++++
T Consensus 64 NHD~~-------------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~---- 96 (166)
T cd07404 64 NHEFY-------------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR---- 96 (166)
T ss_pred CcceE-------------------------------------------EEEEeeecccccCccchHHHHhCCCCCC----
Confidence 99972 1222221111111 12345555555554
Q ss_pred CCCCeEEEEeccCCccCCC-C---CCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 489 SKTPWLIFAGHRPMYSSLD-G---FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~-~---~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
+.+||++|+|+..... . ....+...++.+..++++++|+++++||+|....
T Consensus 97 ---~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 97 ---GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred ---CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 2489999999976543 1 1112234566788888899999999999998743
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.6e-10 Score=105.09 Aligned_cols=123 Identities=22% Similarity=0.282 Sum_probs=75.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+||+++||+|.. ...++++++.+ .++|+|+++||+++. .++.+.++.+ |++.+
T Consensus 1 Mki~~~sD~H~~--------------~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v 53 (156)
T PF12850_consen 1 MKIAVISDLHGN--------------LDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVV 53 (156)
T ss_dssp EEEEEEE--TTT--------------HHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE
T ss_pred CEEEEEeCCCCC--------------hhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEE
Confidence 699999999974 23466777777 469999999999852 4555555554 89999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh-c
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLAS-V 486 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~-~ 486 (639)
.||||... +...... . . +.. .
T Consensus 54 ~GNHD~~~-------------------~~~~~~~------~-~--------------------------------~~~~~ 75 (156)
T PF12850_consen 54 RGNHDNWA-------------------FPNENDE------E-Y--------------------------------LLDAL 75 (156)
T ss_dssp --CCHSTH-------------------HHSEECT------C-S--------------------------------SHSEE
T ss_pred eCCccccc-------------------chhhhhc------c-c--------------------------------cccce
Confidence 99999631 1110000 0 0 111 0
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
...-....|++.|...+.... ..+.+..++...+++++++||.|.....
T Consensus 76 ~~~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 124 (156)
T PF12850_consen 76 RLTIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVF 124 (156)
T ss_dssp EEEETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEE
T ss_pred eeeecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEE
Confidence 001124578888887765331 1335667788999999999999997764
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.9e-09 Score=108.73 Aligned_cols=89 Identities=16% Similarity=0.280 Sum_probs=59.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcC------hHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhh-
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPG------SLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV- 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg------~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l- 398 (639)
.+||++.++|+|.+..-.+.-...-|. ..++..-|.+.++.++||||+++||+++.......-..++..++|.
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I 131 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAI 131 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhHh
Confidence 579999999999886522110001111 2445555555667799999999999998743332223455666664
Q ss_pred hcCCceEEecCCCCcC
Q 006591 399 ASRVSYMTAIGNHERD 414 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~~ 414 (639)
..++||.+++||||-.
T Consensus 132 ~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 132 DRKIPWAAVLGNHDDE 147 (379)
T ss_pred hcCCCeEEEecccccc
Confidence 4799999999999964
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.1e-10 Score=100.24 Aligned_cols=119 Identities=24% Similarity=0.217 Sum_probs=82.2
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCC
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGN 410 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GN 410 (639)
+++||+|...... ..... .....+.++|+|+++||+++...... +..+...........|++.++||
T Consensus 1 ~~~gD~h~~~~~~-----------~~~~~-~~~~~~~~~~~vi~~GD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GN 67 (131)
T cd00838 1 AVISDIHGNLEAL-----------EAVLE-AALAAAEKPDFVLVLGDLVGDGPDPE-EVLAAALALLLLLGIPVYVVPGN 67 (131)
T ss_pred CeeecccCCccch-----------HHHHH-HHHhcccCCCEEEECCcccCCCCCch-HHHHHHHHHhhcCCCCEEEeCCC
Confidence 4689999764311 11110 23445689999999999998655433 33333233334468999999999
Q ss_pred CCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 006591 411 HERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSK 490 (639)
Q Consensus 411 HD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~ 490 (639)
||
T Consensus 68 HD------------------------------------------------------------------------------ 69 (131)
T cd00838 68 HD------------------------------------------------------------------------------ 69 (131)
T ss_pred ce------------------------------------------------------------------------------
Confidence 99
Q ss_pred CCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceee
Q 006591 491 TPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTC 544 (639)
Q Consensus 491 ~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~ 544 (639)
|++.|.|++.............++.+..++.+++++++|+||.|.+.+..
T Consensus 70 ----i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 ----ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ----EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 88899999766542221112246788899999999999999999999864
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.9e-09 Score=99.93 Aligned_cols=59 Identities=19% Similarity=0.323 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
|++++||+|.. ...++++++.+++ +|.|+++||+++...... +....|++.+.
T Consensus 1 ~i~~isD~H~~--------------~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~ 53 (155)
T cd00841 1 KIGVISDTHGS--------------LELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVR 53 (155)
T ss_pred CEEEEecCCCC--------------HHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEe
Confidence 58999999953 2455666666543 999999999996543211 23467899999
Q ss_pred CCCCcC
Q 006591 409 GNHERD 414 (639)
Q Consensus 409 GNHD~~ 414 (639)
||||..
T Consensus 54 GNhD~~ 59 (155)
T cd00841 54 GNCDGE 59 (155)
T ss_pred CCCCCc
Confidence 999973
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.7e-08 Score=92.97 Aligned_cols=171 Identities=13% Similarity=0.116 Sum_probs=99.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
+++++||+|..... ....+.+.+.+++.++|.|+|+||+++ ....+.++.+ ..|++.|.
T Consensus 1 ~i~viSDtHl~~~~-----------~~~~~~~~~~~~~~~~d~iih~GDi~~--------~~~~~~l~~~--~~~~~~V~ 59 (178)
T cd07394 1 LVLVIGDLHIPHRA-----------SDLPAKFKKLLVPGKIQHVLCTGNLCS--------KETYDYLKTI--APDVHIVR 59 (178)
T ss_pred CEEEEEecCCCCCc-----------hhhHHHHHHHhccCCCCEEEECCCCCC--------HHHHHHHHhh--CCceEEEE
Confidence 47899999965421 122334444454468999999999985 1222333333 24789999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||... .+|. ...+++++.+
T Consensus 60 GN~D~~~------------------------~lp~------~~~~~~~g~~----------------------------- 80 (178)
T cd07394 60 GDFDENL------------------------NYPE------TKVITVGQFK----------------------------- 80 (178)
T ss_pred CCCCccc------------------------cCCC------cEEEEECCEE-----------------------------
Confidence 9999631 1221 1234444444
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCC
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHS 568 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (639)
|.+.|.-.+... .. .+.+..+.++.++|++++||+|......
T Consensus 81 ------i~l~HG~~~~~~---~~-----~~~~~~~~~~~~~dvii~GHTH~p~~~~------------------------ 122 (178)
T cd07394 81 ------IGLIHGHQVVPW---GD-----PDSLAALQRQLDVDILISGHTHKFEAFE------------------------ 122 (178)
T ss_pred ------EEEEECCcCCCC---CC-----HHHHHHHHHhcCCCEEEECCCCcceEEE------------------------
Confidence 444443222111 00 2234555667889999999999754321
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE
Q 006591 569 NYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV 627 (639)
Q Consensus 569 ~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v 627 (639)
.++.+.+..|+.|.+.... . ......|+.++++++.+.++.++..++++
T Consensus 123 -~~g~~viNPGSv~~~~~~~-----~----~~~~~syail~~~~~~~~~~~~~l~~~~~ 171 (178)
T cd07394 123 -HEGKFFINPGSATGAFSPL-----D----PNVIPSFVLMDIQGSKVVTYVYQLIDGEV 171 (178)
T ss_pred -ECCEEEEECCCCCCCCCCC-----C----CCCCCeEEEEEecCCeEEEEEEEEECCcE
Confidence 1234667778877532210 0 01123699999988889999988655543
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.4e-09 Score=96.34 Aligned_cols=117 Identities=23% Similarity=0.325 Sum_probs=76.4
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
||+++||+|.... .+...++|+|+++||+++. +...+++.+.+.++.+. ..+++.++
T Consensus 1 ~i~~isD~H~~~~---------------------~~~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~ 57 (135)
T cd07379 1 RFVCISDTHSRHR---------------------TISIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIA 57 (135)
T ss_pred CEEEEeCCCCCCC---------------------cCcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEE
Confidence 5899999995421 1233679999999999954 44455556666665542 22357899
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||... . +
T Consensus 58 GNHD~~~--------------------------------~----------------------------------~----- 66 (135)
T cd07379 58 GNHDLTL--------------------------------D----------------------------------P----- 66 (135)
T ss_pred CCCCCcC--------------------------------C----------------------------------C-----
Confidence 9999620 0 1
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
..+.|++.|.|++..............+.+..++++++++++++||+|...
T Consensus 67 --~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 --EDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 123688899999765431111001113556777788899999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.8e-09 Score=107.05 Aligned_cols=180 Identities=16% Similarity=0.154 Sum_probs=95.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-C---cHHHHHHHHHhhhhhhcC-C
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-G---FLVEWDFFLHQITPVASR-V 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g---~~~~wd~f~~~l~~l~~~-v 402 (639)
+++++++|+|.+... +.....+.+.++. ...++|+|+++||+++.- + .....+...+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~--------~~~~~~~~~~l~~-~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER--------PAITAAFLRFLRG-EARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC--------hhHHHHHHHHHHh-hhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 479999999986432 1111222222222 236899999999999631 1 112234455566666543 8
Q ss_pred ceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 006591 403 SYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKD 482 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~ 482 (639)
|++.+.||||+... ..+.+..++..- .....++.++.++++...... ......++++++.
T Consensus 72 ~v~~v~GNHD~~~~----------------~~~~~~~g~~~l---~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLG----------------KRFAKAAGMTLL---PDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhh----------------HHHHHhCCCEEe---CCcEEEEECCEEEEEECCccc-ccCCHHHHHHHHH
Confidence 99999999997311 011111111000 112356777877777654322 1233455555555
Q ss_pred HhhccCCCCCeEEEEeccCCccCCC--------------C--CCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSLD--------------G--FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~~--------------~--~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
+.. ||...++|.+++.... . .........+.+.+++++++++++++||+|....
T Consensus 132 ~r~------~~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 542 1233333333332110 0 0000001135577888999999999999998654
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.92 E-value=5e-09 Score=102.53 Aligned_cols=109 Identities=17% Similarity=0.226 Sum_probs=71.9
Q ss_pred HhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhh---cCCceEEecCCCCcCCCCCCCccCCCCCCCcccccccc
Q 006591 363 EVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVA---SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYET 437 (639)
Q Consensus 363 ~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~---~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~ 437 (639)
.++..+||+|+++||+++.+.. ..+|.+.++.+.+++ ..+|++.++||||.+..+. +...+.-..|++
T Consensus 37 a~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~-------~~~~~~v~RF~~ 109 (195)
T cd08166 37 ALNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE-------DPIESKIRRFEK 109 (195)
T ss_pred HHhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC-------CcCHHHHHHHHH
Confidence 3455799999999999987543 234554444444443 4689999999999852110 000001112222
Q ss_pred ccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHH
Q 006591 438 YFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFV 517 (639)
Q Consensus 438 ~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r 517 (639)
+| |++.|.|+.....
T Consensus 110 ~F-------------------------------------------------------i~lsH~P~~~~~~---------- 124 (195)
T cd08166 110 YF-------------------------------------------------------IMLSHVPLLAEGG---------- 124 (195)
T ss_pred hh-------------------------------------------------------eeeeccccccccc----------
Confidence 22 8899999866542
Q ss_pred HHHHHHHHhCCCeEEEeCccccccee
Q 006591 518 KSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 518 ~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
..+..++.+++++++|+||.|.+...
T Consensus 125 ~~~~~~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 125 QALKHVVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred HHHHHHHHhcCceEEEEcCccceeeE
Confidence 25677888999999999999997764
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.1e-08 Score=99.17 Aligned_cols=176 Identities=16% Similarity=0.158 Sum_probs=91.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+|.... . ...+.+++.+||+|+++||+++.. .++.+.+..+ ..|++.+
T Consensus 1 ~rIa~isDiHg~~~-------------~---~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V 56 (238)
T cd07397 1 LRIAIVGDVHGQWD-------------L---EDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVI 56 (238)
T ss_pred CEEEEEecCCCCch-------------H---HHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEE
Confidence 58999999995421 0 112234556899999999998431 1233333332 4789999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeE---EEEeCCEEEEEEeCCCC------C---------
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWY---SIEQASVHFTVISTEHD------W--------- 469 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Y---sfd~G~v~fi~LDT~~~------~--------- 469 (639)
+||||..+.... .+ . ...+.+....-. .... ..++....+.++-++.. |
T Consensus 57 ~GNHD~~~~~~~-~~-----k---~~~l~~~L~~lg----~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~ 123 (238)
T cd07397 57 LGNHDAWYDATF-RK-----K---GDRVQEQLELLG----DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAV 123 (238)
T ss_pred cCCCcccccccc-cc-----h---HHHHHHHHHHhC----CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHH
Confidence 999998542210 00 0 001111111000 0111 11122222333333210 0
Q ss_pred ---CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-------------CCCchhHHHHHHHHHHHHhCCCeEEE
Q 006591 470 ---WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-------------GFLSVDKFFVKSVEPLLLKNKVDLVL 533 (639)
Q Consensus 470 ---~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-------------~~~~~~~~~r~~l~~Ll~~y~Vdlvl 533 (639)
..-.+-++.+.+.++.++..+ -.|++.|.++...++ +....++.+++++..+-..-.+++++
T Consensus 124 fgi~s~~eA~~~ive~~~~~~~~~--~~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~ 201 (238)
T cd07397 124 YGVISLEESAQRIIAAAKKAPPDL--PLILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVV 201 (238)
T ss_pred hCCCCHHHHHHHHHHHhhhcCCCC--CeEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEE
Confidence 011233444444444332222 278889999976542 11224567777776655445689999
Q ss_pred eCcccccce
Q 006591 534 FGHVHNYER 542 (639)
Q Consensus 534 sGH~H~YeR 542 (639)
+||.|.--|
T Consensus 202 fGH~H~~l~ 210 (238)
T cd07397 202 FGHMHHRLR 210 (238)
T ss_pred eCCccCccc
Confidence 999998644
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.6e-09 Score=101.59 Aligned_cols=59 Identities=17% Similarity=0.345 Sum_probs=41.3
Q ss_pred HHHHHHHHhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhh-------cCCceEEecCCCCcC
Q 006591 356 VVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVA-------SRVSYMTAIGNHERD 414 (639)
Q Consensus 356 ~~~~l~~~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~-------~~vP~~~v~GNHD~~ 414 (639)
..+.+...+.+.+||+|+++||+++.... ..+|.+..+.+..+. ..+|++.++||||+.
T Consensus 33 ~~~~~~~~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 33 MRRAFKTALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 34444555567899999999999976432 245665555454443 268999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=106.35 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=56.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
.+++++.++|+|..... ....+.+..+.+..+|+|+.+||+++. .....++...+.++++.+..+++
T Consensus 43 ~~~~iv~lSDlH~~~~~------------~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 43 QGLKIVQLSDLHSLPFR------------EEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred CCeEEEEeehhhhchhh------------HHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 57899999999976431 223344444556677999999999974 12234566777788888899999
Q ss_pred EecCCCCcCC
Q 006591 406 TAIGNHERDY 415 (639)
Q Consensus 406 ~v~GNHD~~~ 415 (639)
+++||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999853
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.7e-09 Score=100.72 Aligned_cols=178 Identities=16% Similarity=0.192 Sum_probs=96.9
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHH------------------
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWD------------------ 389 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd------------------ 389 (639)
-++++++|.+. ..+.++++.+.+....+|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g--------------~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~ 71 (255)
T PF14582_consen 6 RKILAISNFRG--------------DFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEE 71 (255)
T ss_dssp -EEEEEE--TT---------------HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHH
T ss_pred hhheeecCcch--------------HHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhh
Confidence 37889999873 3567888888888789999999999987766666777
Q ss_pred --------HHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEE
Q 006591 390 --------FFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFT 461 (639)
Q Consensus 390 --------~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi 461 (639)
.|++.+..+ .+|++++|||||-... .| ...+|....-.|.--.-...+.+--|...|+
T Consensus 72 ~~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~~----~~--------lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~ 137 (255)
T PF14582_consen 72 CYDSEALDKFFRILGEL--GVPVFVVPGNMDAPER----FF--------LREAYNAEIVTPHIHNVHESFFFWKGEYLVA 137 (255)
T ss_dssp HHHHHHHHHHHHHHHCC---SEEEEE--TTS-SHH----HH--------HHHHHHCCCC-TTEEE-CTCEEEETTTEEEE
T ss_pred hhhHHHHHHHHHHHHhc--CCcEEEecCCCCchHH----HH--------HHHHhccceeccceeeeeeeecccCCcEEEE
Confidence 677766654 8999999999996200 00 0012221111111000001222333457777
Q ss_pred EEeCCC---C----CC--CCHHHHHHHHHHHhhccCCCCCeEEEEeccCC-ccCCCCCCchhHHHHHHHHHHHHhCCCeE
Q 006591 462 VISTEH---D----WW--LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPM-YSSLDGFLSVDKFFVKSVEPLLLKNKVDL 531 (639)
Q Consensus 462 ~LDT~~---~----~~--~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~-y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdl 531 (639)
.+..+- . +. ....-.+|..+.|..++ ..-+|+++|.|+ +..+....+ .+.+..++++|+.++
T Consensus 138 G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~i 209 (255)
T PF14582_consen 138 GMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDI 209 (255)
T ss_dssp EE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SE
T ss_pred ecCccccCCCccccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcE
Confidence 776531 0 10 11224456666666642 334788899999 444422222 357788999999999
Q ss_pred EEeCcccccc
Q 006591 532 VLFGHVHNYE 541 (639)
Q Consensus 532 vlsGH~H~Ye 541 (639)
+|+||.|--.
T Consensus 210 vl~Ghihe~~ 219 (255)
T PF14582_consen 210 VLCGHIHESH 219 (255)
T ss_dssp EEE-SSS-EE
T ss_pred EEecccccch
Confidence 9999999744
|
|
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.6e-07 Score=91.10 Aligned_cols=176 Identities=19% Similarity=0.195 Sum_probs=104.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhh-cCCce
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVA-SRVSY 404 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~-~~vP~ 404 (639)
.+|+++++|.|.. ...++++.+.+...++|+++.+||++|.. +...+-.+-.. ++.+. ..+|+
T Consensus 3 ~mkil~vtDlHg~--------------~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~-~e~l~~~~~~v 67 (226)
T COG2129 3 KMKILAVTDLHGS--------------EDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNK-LEALKELGIPV 67 (226)
T ss_pred cceEEEEeccccc--------------hHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhH-HHHHHhcCCeE
Confidence 5899999999954 34567777777677999999999999332 21111111100 33333 58999
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC--C----CCCCHHH-HH
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH--D----WWLNSEQ-YK 477 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~--~----~~~g~~Q-~~ 477 (639)
++++||-|-..-. . .... ....-. --..+.|++.|+.+--.. . +...+++ +.
T Consensus 68 ~avpGNcD~~~v~--------------~-~l~~-~~~~v~-----~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s 126 (226)
T COG2129 68 LAVPGNCDPPEVI--------------D-VLKN-AGVNVH-----GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYS 126 (226)
T ss_pred EEEcCCCChHHHH--------------H-HHHh-cccccc-----cceEEecCcEEEEecccCCCCCCCccccCHHHHHH
Confidence 9999998852100 0 0000 111100 035677888887753221 1 1122332 34
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCCCch-hHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSV-DKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~-~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
-|++-++.++. +-.|+++|.|+|.....-+.. ..-....+.+++++.++.+.++||.|-+.
T Consensus 127 ~l~~~v~~~~~---~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 127 KLKSLVKKADN---PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHHhcccC---cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 44444554321 113999999999866421111 22335788899999999999999999743
|
|
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.3e-07 Score=89.38 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=48.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH---H--HHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL---V--EWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~---~--~wd~f~~~l~~l~~~v 402 (639)
+|++++||+|.. ...++++.+.+++.++|.|+++||+++..... . ..++..+.++.+ ..
T Consensus 1 mri~viSD~Hg~--------------~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~ 64 (182)
T PRK09453 1 MKLMFASDTHGS--------------LPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--AD 64 (182)
T ss_pred CeEEEEEeccCC--------------HHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CC
Confidence 589999999943 23466777777778899999999999643210 0 123344444432 35
Q ss_pred ceEEecCCCCcC
Q 006591 403 SYMTAIGNHERD 414 (639)
Q Consensus 403 P~~~v~GNHD~~ 414 (639)
+++.+.||||..
T Consensus 65 ~v~~V~GNhD~~ 76 (182)
T PRK09453 65 KIIAVRGNCDSE 76 (182)
T ss_pred ceEEEccCCcch
Confidence 899999999963
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.4e-07 Score=102.78 Aligned_cols=87 Identities=15% Similarity=0.142 Sum_probs=58.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhh-------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITP------- 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~------- 397 (639)
+.+||++++|+|.+..... ..........++++++.+.+.++|+||++||+.+..... .....+++.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~--~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGEND--PVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred CceEEEEEcCCCCCCccCC--chhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 5699999999998743211 111122456788899988889999999999999765321 222233343332
Q ss_pred --------------------h-------hcCCceEEecCCCCcC
Q 006591 398 --------------------V-------ASRVSYMTAIGNHERD 414 (639)
Q Consensus 398 --------------------l-------~~~vP~~~v~GNHD~~ 414 (639)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1378999999999973
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-07 Score=90.18 Aligned_cols=62 Identities=27% Similarity=0.397 Sum_probs=41.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+|++++||+|.... .++.+.+.++.. ++|.|+++||++. ....+.++.+ ..|++.
T Consensus 1 m~i~viSD~H~~~~--------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~ 56 (158)
T TIGR00040 1 MKILVISDTHGPLR--------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIA 56 (158)
T ss_pred CEEEEEecccCCcc--------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEE
Confidence 58999999995421 123344444444 8999999999982 1233333332 458999
Q ss_pred ecCCCCc
Q 006591 407 AIGNHER 413 (639)
Q Consensus 407 v~GNHD~ 413 (639)
+.||||.
T Consensus 57 V~GN~D~ 63 (158)
T TIGR00040 57 VRGNNDG 63 (158)
T ss_pred EccCCCc
Confidence 9999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.4e-08 Score=96.68 Aligned_cols=56 Identities=18% Similarity=0.308 Sum_probs=39.5
Q ss_pred HHHHHhhcCCCcEEEEcCCccccCC--cHHHHHHHHHhhhhhh---cCCceEEecCCCCcC
Q 006591 359 AMSDEVNNGNVDSVFHIGDISYATG--FLVEWDFFLHQITPVA---SRVSYMTAIGNHERD 414 (639)
Q Consensus 359 ~l~~~i~~~~pDfVl~~GDl~y~~g--~~~~wd~f~~~l~~l~---~~vP~~~v~GNHD~~ 414 (639)
.+.+.+++.+||+|+++||+++... ...+|..+...+..+. ...|++.++||||..
T Consensus 29 ~~~~~i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 4445566789999999999997543 2345655555444443 258999999999974
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.3e-08 Score=98.93 Aligned_cols=166 Identities=17% Similarity=0.197 Sum_probs=97.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH---------------------HH
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL---------------------VE 387 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~---------------------~~ 387 (639)
||++.++.+..... ......+.....+.++|++||+||.+|++... .+
T Consensus 1 r~a~~SC~~~~~~~-----------~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (228)
T cd07389 1 RFAFGSCNKYESGY-----------FNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEE 69 (228)
T ss_pred CEEEEECCCCCCCC-----------cHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHH
Confidence 57888887755321 12222222112468999999999999998521 11
Q ss_pred HH----HHH--HhhhhhhcCCceEEecCCCCcCCCCCCCccC-CCCC-----CCccccccccccCCCCCC-----CCCCe
Q 006591 388 WD----FFL--HQITPVASRVSYMTAIGNHERDYVNSGSVYS-TPDS-----GGECGIPYETYFPMPTPS-----KDRPW 450 (639)
Q Consensus 388 wd----~f~--~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~-~~ds-----gge~~~~y~~~f~~P~~~-----~~~~~ 450 (639)
+. .+. ..++.+.+.+|++.++++||+..+..+..-. .... .......|..+++.+... ....|
T Consensus 70 ~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y 149 (228)
T cd07389 70 YRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIY 149 (228)
T ss_pred HHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEE
Confidence 11 111 2345666889999999999996443221000 0000 001122455555544332 24579
Q ss_pred EEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCC
Q 006591 451 YSIEQASV-HFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKV 529 (639)
Q Consensus 451 Ysfd~G~v-~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~V 529 (639)
++|.+|.. .|++||++... ..+.+ ....|++|..++.+.++
T Consensus 150 ~~~~~G~~~~~~~lD~R~~R-------------------------------------d~W~~-~~~er~~l~~~~~~~~~ 191 (228)
T cd07389 150 RSFRFGDLVDLILLDTRTYR-------------------------------------DSWDG-YPAERERLLDLLAKRKI 191 (228)
T ss_pred EEEecCCcceEEEEeccccc-------------------------------------ccccc-cHHHHHHHHHHHHHhCC
Confidence 99999996 99999998764 11111 13346777777655543
Q ss_pred --eEEEeCccccccee
Q 006591 530 --DLVLFGHVHNYERT 543 (639)
Q Consensus 530 --dlvlsGH~H~YeRt 543 (639)
-++|+|++|..+-.
T Consensus 192 ~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 192 KNVVFLSGDVHLAEAS 207 (228)
T ss_pred CCeEEEecHHHHHHHh
Confidence 38899999986543
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.8e-07 Score=88.28 Aligned_cols=184 Identities=19% Similarity=0.176 Sum_probs=97.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+++.+++|+|.+..-+..-....+++...-++|.+..+. ..=|.|+..|||+.+......-.. ++.+..+ ..+ -+
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea~~D-l~~i~~L-PG~-K~ 77 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEAEED-LRFIGDL-PGT-KY 77 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhhhhh-hhhhhcC-CCc-EE
Confidence 467788888876443321122233333334455444322 345899999999988654322111 2333332 233 36
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeE---EEEeCCEEEEEEeC---C-CCCCCCHHH---
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWY---SIEQASVHFTVIST---E-HDWWLNSEQ--- 475 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Y---sfd~G~v~fi~LDT---~-~~~~~g~~Q--- 475 (639)
.+.||||+.|... +. ..+. +|. ..+| .|.+++..++..-. - .++..-.+|
T Consensus 78 m~rGNHDYWw~s~-sk-------------l~n~--lp~----~l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Dek 137 (230)
T COG1768 78 MIRGNHDYWWSSI-SK-------------LNNA--LPP----ILFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEK 137 (230)
T ss_pred EEecCCccccchH-HH-------------HHhh--cCc----hHhhhccceeEeeEEEEEeecccCCCCCcCccchhHHH
Confidence 7899999976421 11 1111 110 0111 34555544443321 1 112122233
Q ss_pred -----HHHHHH-HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 476 -----YKWIQK-DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 476 -----~~WL~~-~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
+.-|+. ..++. ++...-.||+.|.|+++.... ...+.+++++++|+.++.||.|.-.|-
T Consensus 138 i~~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP~s~~~t--------~~~~sevlee~rv~~~lyGHlHgv~~p 202 (230)
T COG1768 138 IFLREIGRLRLSADAAL-PKGVSKFIVMTHYPPFSDDGT--------PGPFSEVLEEGRVSKCLYGHLHGVPRP 202 (230)
T ss_pred HHHHHHHHHHHHHHHhc-ccCcCeEEEEEecCCCCCCCC--------CcchHHHHhhcceeeEEeeeccCCCCC
Confidence 222333 22223 234455899999999877642 124567788999999999999998774
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=2e-07 Score=91.14 Aligned_cols=59 Identities=15% Similarity=0.202 Sum_probs=36.5
Q ss_pred HHHHHHHHhh-cCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhh--------------------cCCceEEecCCCC
Q 006591 356 VVKAMSDEVN-NGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVA--------------------SRVSYMTAIGNHE 412 (639)
Q Consensus 356 ~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~--------------------~~vP~~~v~GNHD 412 (639)
.++.+.+.+. ..+||.|+++||+... +. ..+|.+..+....+. ..+|++.++||||
T Consensus 31 YL~~~~~~~~~~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 31 FLGHIVSMMQFWLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 3444444433 3799999999999954 33 344433222222211 1489999999999
Q ss_pred cCC
Q 006591 413 RDY 415 (639)
Q Consensus 413 ~~~ 415 (639)
+.+
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 964
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.7e-07 Score=92.77 Aligned_cols=188 Identities=16% Similarity=0.137 Sum_probs=94.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l~~l~~~vP~ 404 (639)
++|+.++|+|.... +. .+.+....+..+++++++.++| +++..||++....... +.....+.+.. .-.-
T Consensus 1 l~i~~~sD~hg~~~-~~----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~---~g~d 72 (252)
T cd00845 1 LTILHTNDLHGHFE-PA----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNA---LGYD 72 (252)
T ss_pred CEEEEecccccCcc-cc----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHh---cCCC
Confidence 58999999994321 10 1223456777888888777788 7799999996544321 11223333332 2245
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCcccccc-cccc-CC---CCCCCCCCeEEEEeCCEEEEEEe--CCCCCC-------
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPY-ETYF-PM---PTPSKDRPWYSIEQASVHFTVIS--TEHDWW------- 470 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y-~~~f-~~---P~~~~~~~~Ysfd~G~v~fi~LD--T~~~~~------- 470 (639)
+.++||||+++...+ +...- .+...++ .... .. ........|-.++.+++++-++. +.....
T Consensus 73 ~~~~GNHe~d~g~~~--l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 73 AVTIGNHEFDYGLDA--LAELY--KDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred EEeeccccccccHHH--HHHHH--HhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 577899998632110 00000 0000000 0000 00 00001134556788886554443 322100
Q ss_pred ---CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 471 ---LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 471 ---~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
......+.+++..+. .+.+...+|++.|.+... ..++...+ .+||++|+||.|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 149 IGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred cCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 001223334332222 135677899999988642 11111111 5899999999998664
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-07 Score=86.18 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=33.0
Q ss_pred EEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 494 LIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 494 vIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
.|+++|+|++...... .......+.+.+++.+++++++|+||.|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 5788888886443211 001122467778888999999999999986654
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.1e-07 Score=91.59 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=45.6
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC----CcHHHHHHHHHhhhhhhc-CCceE
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT----GFLVEWDFFLHQITPVAS-RVSYM 405 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~----g~~~~wd~f~~~l~~l~~-~vP~~ 405 (639)
++++|+|.+.... ......++.+.+.. .+||+|+++||+++.- ......+.+.+.++.+.. ..|++
T Consensus 2 ~~iSDlHl~~~~~-------~~~~~~l~~l~~~~--~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPERP-------DITALFLDFLREEA--RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCCh-------hHHHHHHHHHHhhh--ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999864311 00112233333222 3799999999999631 112223445555666553 58999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999973
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.7e-07 Score=100.11 Aligned_cols=179 Identities=16% Similarity=0.225 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhhc--CCCcEEEEcCCccccCCcH-------HHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCC
Q 006591 354 LSVVKAMSDEVNN--GNVDSVFHIGDISYATGFL-------VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYST 424 (639)
Q Consensus 354 ~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~-------~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~ 424 (639)
..+++.+++.+++ .++|+|+++||++-..... +......+.+...+..+|+++++||||.-+.+. |.
T Consensus 194 ~~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~---F~- 269 (577)
T KOG3770|consen 194 KRLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL---FA- 269 (577)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh---cC-
Confidence 4567777777654 3499999999999544110 112234456666778999999999999854332 10
Q ss_pred CCCCCcc-cc--cccc---ccC--CCCCCC----CCCeEEE-EeCCEEEEEEeCCCCC----------CCCHHHHHHHHH
Q 006591 425 PDSGGEC-GI--PYET---YFP--MPTPSK----DRPWYSI-EQASVHFTVISTEHDW----------WLNSEQYKWIQK 481 (639)
Q Consensus 425 ~dsgge~-~~--~y~~---~f~--~P~~~~----~~~~Ysf-d~G~v~fi~LDT~~~~----------~~g~~Q~~WL~~ 481 (639)
+.+-.+. .. .|+. .|. +|.... .+.+|.- -+++.++|+||+..-. .....|++|+..
T Consensus 270 ~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~ 349 (577)
T KOG3770|consen 270 PGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVD 349 (577)
T ss_pred CCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHH
Confidence 0000000 00 1111 111 232221 2446654 4689999999996421 345788999999
Q ss_pred HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC--CCeEEEeCcccccce
Q 006591 482 DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN--KVDLVLFGHVHNYER 542 (639)
Q Consensus 482 ~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y--~VdlvlsGH~H~YeR 542 (639)
+|.++.. +..-|=+++|.|+-.... .......+-.++.++ -|...|.||.|.-+-
T Consensus 350 ~L~~ae~-~GekVhil~HIPpG~~~c-----~~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f 406 (577)
T KOG3770|consen 350 QLQEAES-AGEKVHILGHIPPGDGVC-----LEGWSINFYRIVNRFRSTIAGQFYGHTHIDEF 406 (577)
T ss_pred HHHHHHh-cCCEEEEEEeeCCCCcch-----hhhhhHHHHHHHHHHHHhhhhhccccCcceeE
Confidence 9998753 344478889999854221 112233444555555 244679999998663
|
|
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.2e-06 Score=87.17 Aligned_cols=197 Identities=16% Similarity=0.168 Sum_probs=99.2
Q ss_pred eEEEEEecCCCCCCCCCC--ccccCcChHHHHHHHHHHhhcCCCcEEEE-cCCccccCCcHHHH---------HHHHHhh
Q 006591 328 MKFLAYGDMGKAPRDAST--EHYIQPGSLSVVKAMSDEVNNGNVDSVFH-IGDISYATGFLVEW---------DFFLHQI 395 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~--~~~~~pg~~~~~~~l~~~i~~~~pDfVl~-~GDl~y~~g~~~~w---------d~f~~~l 395 (639)
++|+.++|+|..-..... ......+....+..+++++++.+++.++. +||+...... ..+ +...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 589999999954211100 00011234566777888877777887776 9999964321 222 1233334
Q ss_pred hhhhcCCceEEecCCCCcCCCCCCCccCC--CCCCCccccccc--cc-cCCCCCCCCCCeEEEEeC-CEEEEEEeCCCCC
Q 006591 396 TPVASRVSYMTAIGNHERDYVNSGSVYST--PDSGGECGIPYE--TY-FPMPTPSKDRPWYSIEQA-SVHFTVISTEHDW 469 (639)
Q Consensus 396 ~~l~~~vP~~~v~GNHD~~~~~~~~~y~~--~dsgge~~~~y~--~~-f~~P~~~~~~~~Ysfd~G-~v~fi~LDT~~~~ 469 (639)
..+ .. -+.++||||+++... .+.. ...+ .++- .. +.-.....-..|..++.+ ++++-++.-....
T Consensus 80 n~~--g~-d~~~lGNHe~d~g~~--~l~~~~~~~~----~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 80 NAL--GY-DAGTLGNHEFNYGLD--YLDKVIKQAN----FPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred Hhc--CC-CEEeecccCcccCHH--HHHHHHHhCC----CCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 333 33 356789999864211 0000 0000 0000 00 000000012356778888 8665555432110
Q ss_pred ---------------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEE
Q 006591 470 ---------------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVL 533 (639)
Q Consensus 470 ---------------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~Vdlvl 533 (639)
....+..++..+.|++ .+...+|+++|............ .+.....|.++ -+||++|
T Consensus 151 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~~----~~~~~~~la~~~~~vD~Il 223 (277)
T cd07410 151 IPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESLT----GENAAYELAEEVPGIDAIL 223 (277)
T ss_pred cccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccccC----CccHHHHHHhcCCCCcEEE
Confidence 0112234444444543 45678999999987543210000 11222344444 4899999
Q ss_pred eCcccccc
Q 006591 534 FGHVHNYE 541 (639)
Q Consensus 534 sGH~H~Ye 541 (639)
+||.|...
T Consensus 224 gGHsH~~~ 231 (277)
T cd07410 224 TGHQHRRF 231 (277)
T ss_pred eCCCcccc
Confidence 99999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.6e-06 Score=89.39 Aligned_cols=187 Identities=18% Similarity=0.203 Sum_probs=95.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCc
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVEW---DFFLHQITPVASRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP 403 (639)
++++.+.|+|.-... ...+.+....+..+++++++.+++ +++.+||+...... ..+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~----~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-~~~~~g~~~~~~l~~l--~~- 72 (257)
T cd07406 1 FTILHFNDVYEIAPL----DGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-STATKGKQMVPVLNAL--GV- 72 (257)
T ss_pred CeEEEEccceeeccc----CCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-hhhcCCccHHHHHHhc--CC-
Confidence 578999999832211 011223466777788877777788 99999999954322 122 2233333322 22
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCcccccccc---ccCCCCC--CCCCCeEEEEeCCEEE--EEEeCCCCC------C
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYET---YFPMPTP--SKDRPWYSIEQASVHF--TVISTEHDW------W 470 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~---~f~~P~~--~~~~~~Ysfd~G~v~f--i~LDT~~~~------~ 470 (639)
-+.++||||+++... .+...- .+...++-. .+..... ..-+.|..++.+++++ +.+.+.... .
T Consensus 73 d~~~~GNHefd~g~~--~l~~~~--~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~ 148 (257)
T cd07406 73 DLACFGNHEFDFGED--QLQKRL--GESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDP 148 (257)
T ss_pred cEEeecccccccCHH--HHHHHH--hhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCC
Confidence 366899999864211 000000 000000100 0000000 0114577888888654 444443211 0
Q ss_pred C---CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCcccccc
Q 006591 471 L---NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVHNYE 541 (639)
Q Consensus 471 ~---g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H~Ye 541 (639)
. -.+-.+.+++.++...+.+..-+|++.|-+... +. .+.++ .+||++|+||.|..+
T Consensus 149 ~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 149 EYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred CcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0 112233344444333335677899999987521 11 22333 379999999999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.2e-06 Score=88.62 Aligned_cols=210 Identities=17% Similarity=0.179 Sum_probs=98.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCc
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVEW---DFFLHQITPVASRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP 403 (639)
++++.++|+|..-.........+.+....+..+++++++.+++ +++..||+.......+.+ +...+.+..+ ..-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~--g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAM--GVD 78 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhh--CCe
Confidence 4789999999542211000011223456677777777655555 899999999544332222 2223333322 233
Q ss_pred eEEecCCCCcCCCCCCC-ccCCCCC--CCcc--ccccc-cccCCC-----CC--C--CCCCeEEEEeCCEEE--EEEeCC
Q 006591 404 YMTAIGNHERDYVNSGS-VYSTPDS--GGEC--GIPYE-TYFPMP-----TP--S--KDRPWYSIEQASVHF--TVISTE 466 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~-~y~~~ds--gge~--~~~y~-~~f~~P-----~~--~--~~~~~Ysfd~G~v~f--i~LDT~ 466 (639)
+.++||||+++....- ....... ...| ...|+ ..|++- .. + .-..|..++.+++++ |.+-+.
T Consensus 79 -a~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~~~ 157 (288)
T cd07412 79 -ASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAVTK 157 (288)
T ss_pred -eeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeecCC
Confidence 5678999997521100 0000000 0000 00010 011110 00 0 013466678888654 444322
Q ss_pred CC--C-C-------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh--CCCeEEEe
Q 006591 467 HD--W-W-------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK--NKVDLVLF 534 (639)
Q Consensus 467 ~~--~-~-------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~--y~Vdlvls 534 (639)
.. + . .-..-.+-+++.++++...+...+|++.|-.......... ..........++.+ -+||++|.
T Consensus 158 ~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~Ilg 235 (288)
T cd07412 158 DTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFA 235 (288)
T ss_pred CccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEe
Confidence 10 0 0 0112233455544444334677899999988653322100 00011122334444 37999999
Q ss_pred Ccccccce
Q 006591 535 GHVHNYER 542 (639)
Q Consensus 535 GH~H~YeR 542 (639)
||.|....
T Consensus 236 GHsH~~~~ 243 (288)
T cd07412 236 GHTHQAYN 243 (288)
T ss_pred CccCcccc
Confidence 99998653
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=86.59 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=91.8
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-----CcHHHHHH-HHHhhhhhhcCCce
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-----GFLVEWDF-FLHQITPVASRVSY 404 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-----g~~~~wd~-f~~~l~~l~~~vP~ 404 (639)
++++|+|.+.... ........+.......++|.++++||+.+.- ......+. +...++......++
T Consensus 1 ~~iSDlHlg~~~~--------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v 72 (217)
T cd07398 1 LFISDLHLGDGGP--------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRV 72 (217)
T ss_pred CEeeeecCCCCCC--------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeE
Confidence 4789999875432 1122233333222235899999999999642 11111222 23344444568899
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
+.+.||||..... .+......... ......+.+++.+++++.... +......+.|+...+.
T Consensus 73 ~~v~GNHD~~~~~----------------~~~~~~~~~~~--~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~ 133 (217)
T cd07398 73 YYVPGNHDFLLGD----------------FFAEELGLILL--PDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGR 133 (217)
T ss_pred EEECCCchHHHHh----------------HHHHHcCCEEe--ccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhC
Confidence 9999999974210 11111100000 011225677888888876532 2333444555554332
Q ss_pred hcc-----CC-CCCe--EEEEeccCC----ccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 485 SVD-----RS-KTPW--LIFAGHRPM----YSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 485 ~~~-----r~-~~pw--vIV~~H~P~----y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
... .. ...| .+....... .............+.+.+..++++++++++++||+|.....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 134 NPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred cHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 100 00 0000 000000000 00000011122334566777788999999999999987643
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-05 Score=83.27 Aligned_cols=162 Identities=15% Similarity=0.074 Sum_probs=85.9
Q ss_pred CCCcEEEEcCCccccCCcH-----------HHHHHHHHhhhhhh-cCCceEEecCCCCcCCCCCCCccCCCCCCCccccc
Q 006591 367 GNVDSVFHIGDISYATGFL-----------VEWDFFLHQITPVA-SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIP 434 (639)
Q Consensus 367 ~~pDfVl~~GDl~y~~g~~-----------~~wd~f~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~ 434 (639)
.++|++|++||+.-..... ..+..|.+.++... ..+|++.+.||||... .+.....|++..
T Consensus 27 ~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~GNHE~~~-----~l~~l~~gg~v~-- 99 (262)
T cd00844 27 TKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIGGNHEASN-----YLWELPYGGWVA-- 99 (262)
T ss_pred CCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEECCCCCCHH-----HHHhhcCCCeec--
Confidence 5799999999996332111 12334444444332 4677899999999520 000000011100
Q ss_pred cccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC---CC--------CCHHHHHHHH-------HHHhhccCCCCCeEEE
Q 006591 435 YETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD---WW--------LNSEQYKWIQ-------KDLASVDRSKTPWLIF 496 (639)
Q Consensus 435 y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~---~~--------~g~~Q~~WL~-------~~La~~~r~~~pwvIV 496 (639)
...+.+- ....+++++++|..|..... +. ..+.++..+. ..|... +.+--|+
T Consensus 100 -~Ni~~Lg------~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIl 169 (262)
T cd00844 100 -PNIYYLG------YAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIF 169 (262)
T ss_pred -CcEEEec------CCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEE
Confidence 0000000 11246678999998875321 11 1233333211 112221 1123699
Q ss_pred EeccCCccCCCCCCc---------hh------HHHHHHHHHHHHhCCCeEEEeCcccc-cceeec
Q 006591 497 AGHRPMYSSLDGFLS---------VD------KFFVKSVEPLLLKNKVDLVLFGHVHN-YERTCS 545 (639)
Q Consensus 497 ~~H~P~y~~~~~~~~---------~~------~~~r~~l~~Ll~~y~VdlvlsGH~H~-YeRt~p 545 (639)
++|.|+..-...... .. ......+..|+++.+....|+||.|. |++..|
T Consensus 170 LSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 170 LSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred EeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecC
Confidence 999999765431110 00 11235678899999999999999999 776644
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.4e-05 Score=82.67 Aligned_cols=185 Identities=12% Similarity=0.100 Sum_probs=95.3
Q ss_pred eEEEEEecCCCCCCCCCC--------ccccCcChHHHHHHHHHHhhcC-CCcEE-EEcCCccccCCcHHHHHHHHHhhhh
Q 006591 328 MKFLAYGDMGKAPRDAST--------EHYIQPGSLSVVKAMSDEVNNG-NVDSV-FHIGDISYATGFLVEWDFFLHQITP 397 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~--------~~~~~pg~~~~~~~l~~~i~~~-~pDfV-l~~GDl~y~~g~~~~wd~f~~~l~~ 397 (639)
++|+..+|+|..-..... ....+.|....+..+++++++. ++|.+ +.+||+...... ..+......++
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~- 78 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVD- 78 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHH-
Confidence 478899999865322100 1111234466777888887766 88977 579999965432 22221112222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-----------CCCCCCeEEEEeCCEE--EEEEe
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-----------PSKDRPWYSIEQASVH--FTVIS 464 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-----------~~~~~~~Ysfd~G~v~--fi~LD 464 (639)
.+..+++.++.||||+++.... . ....+.+..|- ...-..|..++.++++ ||.+.
T Consensus 79 ~l~~~g~da~~GNHefd~g~~~--l----------~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~ 146 (264)
T cd07411 79 ALNALGVDAMVGHWEFTYGPER--V----------RELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQT 146 (264)
T ss_pred HHHhhCCeEEecccccccCHHH--H----------HHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEec
Confidence 2233556665599998642110 0 00000011110 0001236667888855 45554
Q ss_pred CCCCCC--C--------CHHHHHHHHHHHhhcc-CCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEE
Q 006591 465 TEHDWW--L--------NSEQYKWIQKDLASVD-RSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLV 532 (639)
Q Consensus 465 T~~~~~--~--------g~~Q~~WL~~~La~~~-r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~Vdlv 532 (639)
+..... . .....+.+++.+++.. +.+...+|++.|-+... +. .+.++ .+||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~--------~~-------~la~~~~~iDli 211 (264)
T cd07411 147 FPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV--------DV-------ELAERVPGIDVI 211 (264)
T ss_pred cCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh--------hH-------HHHhcCCCCcEE
Confidence 431100 0 1223444555433321 24567899999987531 11 22233 479999
Q ss_pred EeCcccccc
Q 006591 533 LFGHVHNYE 541 (639)
Q Consensus 533 lsGH~H~Ye 541 (639)
|+||.|...
T Consensus 212 lgGH~H~~~ 220 (264)
T cd07411 212 LSGHTHERT 220 (264)
T ss_pred EeCcccccc
Confidence 999999743
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.9e-06 Score=84.68 Aligned_cols=70 Identities=20% Similarity=0.273 Sum_probs=45.4
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh--------cCCCcEEEEcCCccccCCcHHHHHHHHHhhhh--hhc
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN--------NGNVDSVFHIGDISYATGFLVEWDFFLHQITP--VAS 400 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~--------~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~--l~~ 400 (639)
+++||+|. ....++++++.+. ..+.|.++++||+++.+....+-=+++..+.. ...
T Consensus 1 ~vi~DIHG--------------~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~ 66 (208)
T cd07425 1 VAIGDLHG--------------DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKA 66 (208)
T ss_pred CEEeCccC--------------CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhc
Confidence 47899994 3567778877653 34689999999999754433221122222211 123
Q ss_pred CCceEEecCCCCcC
Q 006591 401 RVSYMTAIGNHERD 414 (639)
Q Consensus 401 ~vP~~~v~GNHD~~ 414 (639)
..+++++.||||..
T Consensus 67 ~~~v~~l~GNHE~~ 80 (208)
T cd07425 67 GGKVHFLLGNHELM 80 (208)
T ss_pred CCeEEEeeCCCcHH
Confidence 56899999999974
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.9e-05 Score=82.51 Aligned_cols=192 Identities=15% Similarity=0.117 Sum_probs=95.0
Q ss_pred eEEEEEecCCCCCCCCCC-------ccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhhhh
Q 006591 328 MKFLAYGDMGKAPRDAST-------EHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQITP 397 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~-------~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l~~ 397 (639)
++|+..+|+|..-..... ....+.+....+..+++++++.+++ +++.+||+........ +.+...+.+..
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 478999999964221100 0111223456667777777666677 5666999985433211 11222333332
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc-cccCCCC-----CCCCCCeEEEEeCCEEE--EEEeCCCC-
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE-TYFPMPT-----PSKDRPWYSIEQASVHF--TVISTEHD- 468 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~-~~f~~P~-----~~~~~~~Ysfd~G~v~f--i~LDT~~~- 468 (639)
+ ... +.++||||+++.... ....- .+...++- ....... ...-..|..++.+++++ |.+-+...
T Consensus 81 ~--g~D-~~~lGNHefd~G~~~--l~~~~--~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~ 153 (281)
T cd07409 81 L--GYD-AMTLGNHEFDDGVEG--LAPFL--NNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTT 153 (281)
T ss_pred c--CCC-EEEeccccccCCHHH--HHHHH--HhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCccc
Confidence 2 344 456799999752110 00000 00000000 0000000 00013466778888654 44443221
Q ss_pred -C-C--C---CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCccccc
Q 006591 469 -W-W--L---NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVHNY 540 (639)
Q Consensus 469 -~-~--~---g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H~Y 540 (639)
. . . -.+..+.+++.++++...+..-+|++.|-.... + ..+.++ -+||+++.||.|..
T Consensus 154 ~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d-------~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 154 ELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D-------KEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred ccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H-------HHHHHcCCCCcEEEeCCcCcc
Confidence 0 0 0 122345566666655444577799999976421 1 122333 48999999999996
Q ss_pred c
Q 006591 541 E 541 (639)
Q Consensus 541 e 541 (639)
.
T Consensus 219 ~ 219 (281)
T cd07409 219 L 219 (281)
T ss_pred c
Confidence 4
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00013 Score=70.57 Aligned_cols=64 Identities=23% Similarity=0.263 Sum_probs=42.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
++++++||+|.... ......+.....++|+|+|+||.+.... ...+.. . -..+++.|
T Consensus 2 m~ilviSDtH~~~~--------------~~~~~~~~~~~~~~d~vih~GD~~~~~~-~~~l~~---~-----~~~~i~~V 58 (172)
T COG0622 2 MKILVISDTHGPLR--------------AIEKALKIFNLEKVDAVIHAGDSTSPFT-LDALEG---G-----LAAKLIAV 58 (172)
T ss_pred cEEEEEeccCCChh--------------hhhHHHHHhhhcCCCEEEECCCcCCccc-hHHhhc---c-----cccceEEE
Confidence 68999999996531 1223333344579999999999995432 111111 0 15688999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||.|..
T Consensus 59 ~GN~D~~ 65 (172)
T COG0622 59 RGNCDGE 65 (172)
T ss_pred EccCCCc
Confidence 9999974
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.3e-05 Score=80.76 Aligned_cols=186 Identities=16% Similarity=0.141 Sum_probs=92.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW---DFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP~ 404 (639)
++++.++|+|..-.... .+.+....+..+++++++.+.++++.+||+...... ..+ ....+.+..+ ...+
T Consensus 1 i~il~~~D~H~~~~~~~----~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~--g~d~ 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDD----NNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAV--GYDA 73 (257)
T ss_pred CEEEEeccCcccccCCC----CccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhc--CCcE
Confidence 48999999996432110 122335556667776655467899999999854321 112 1222333222 3444
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC---------C--CCCCeEEEEeC-CE--EEEEEeCCCC--
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP---------S--KDRPWYSIEQA-SV--HFTVISTEHD-- 468 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~---------~--~~~~~Ysfd~G-~v--~fi~LDT~~~-- 468 (639)
.++||||+++... . ...+.+.+..|.- + .-..|-.++.+ ++ -|+.+-+...
T Consensus 74 -~~~GNHefd~G~~--~----------l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~ 140 (257)
T cd07408 74 -VTPGNHEFDYGLD--R----------LKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETAT 140 (257)
T ss_pred -EccccccccCCHH--H----------HHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCccc
Confidence 5689999964211 0 0000011111100 0 01235556777 64 4555544321
Q ss_pred C-CCC-------HHHHHHHHHH-HhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCccc
Q 006591 469 W-WLN-------SEQYKWIQKD-LASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVH 538 (639)
Q Consensus 469 ~-~~g-------~~Q~~WL~~~-La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H 538 (639)
+ .+. ..-.+-+++. .....+.+..-+|++.|.+...... ... ..+ +.++ .+||++|.||.|
T Consensus 141 ~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~--~~~----~~~---la~~~~giDvIigGH~H 211 (257)
T cd07408 141 KTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS--PWT----STE---LAANVTGIDLIIDGHSH 211 (257)
T ss_pred ccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC--Ccc----HHH---HHHhCCCceEEEeCCCc
Confidence 0 000 0112223333 2222234677899999988754321 111 112 2223 489999999999
Q ss_pred ccce
Q 006591 539 NYER 542 (639)
Q Consensus 539 ~YeR 542 (639)
....
T Consensus 212 ~~~~ 215 (257)
T cd07408 212 TTIE 215 (257)
T ss_pred cccc
Confidence 8654
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.8e-05 Score=85.76 Aligned_cols=80 Identities=13% Similarity=0.226 Sum_probs=55.4
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh---------cCCCcEEEEcCCccccCCc------------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN---------NGNVDSVFHIGDISYATGF------------ 384 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~---------~~~pDfVl~~GDl~y~~g~------------ 384 (639)
..+++++++|+|.+.... ....++.+++.+. ..+++.++++||++...+.
T Consensus 242 ~~~~i~~ISDlHlgs~~~---------~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEF---------LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcch---------hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchh
Confidence 568999999999764311 1233455555554 5689999999999964221
Q ss_pred -HHHHHHHHHhhhhhhcCCceEEecCCCCcC
Q 006591 385 -LVEWDFFLHQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 385 -~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
..+++.+.+.++.+...+|++.++||||..
T Consensus 313 ~~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 313 IYEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred hHHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112345556666666789999999999974
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.2e-06 Score=83.96 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=57.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhhhhc-C-Cce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITPVAS-R-VSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~l~~-~-vP~ 404 (639)
+||++++|+|.+....... ..+.....++++.+.+.+.++|+|+++||+.+..... .....+.+.++.+.. . +|+
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v 78 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPI 78 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceE
Confidence 5899999999875422111 1111245678888888888999999999999765332 222334455555432 3 899
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
++++||||..
T Consensus 79 ~~i~GNHD~~ 88 (253)
T TIGR00619 79 VVISGNHDSA 88 (253)
T ss_pred EEEccCCCCh
Confidence 9999999973
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.8e-05 Score=83.61 Aligned_cols=127 Identities=15% Similarity=0.094 Sum_probs=77.7
Q ss_pred CceEEEEEecCCCCCCCCCC--cc-ccCcChHHHHHHHHHHh-hcCCCcEEEEcCCccccCC--cHHHHHHHHHhhhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDAST--EH-YIQPGSLSVVKAMSDEV-NNGNVDSVFHIGDISYATG--FLVEWDFFLHQITPVA 399 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~--~~-~~~pg~~~~~~~l~~~i-~~~~pDfVl~~GDl~y~~g--~~~~wd~f~~~l~~l~ 399 (639)
+.+|+++++|.|.-...+.. -. ..+=++...+++..+.+ ...+||.++++||+.+.+. ...+|.+..+.++.+.
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 67999999999976532110 00 00111122233333332 2479999999999997542 2456765555555554
Q ss_pred ---cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC
Q 006591 400 ---SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH 467 (639)
Q Consensus 400 ---~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~ 467 (639)
..+|++.++||||.++... .-.+....|++.|+ +....|+.|+..|+++|++.
T Consensus 127 ~~k~~~~~~~i~GNhDIGf~~~--------~~~~~i~Rfe~~fg-------~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDIGFGNE--------LIPEWIDRFESVFG-------PTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred CCCCCCeeEEeCCccccccccc--------cchhHHHHHHHhhc-------chhhhhccCCceeEEeeehh
Confidence 4789999999999964221 00111234555554 23457899999999999875
|
|
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.07 E-value=7.5e-06 Score=81.70 Aligned_cols=74 Identities=19% Similarity=0.163 Sum_probs=44.5
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHH----hhhhhh-cCCceE
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLH----QITPVA-SRVSYM 405 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~----~l~~l~-~~vP~~ 405 (639)
++++|.|.++.. |.....+..+++... .+.|.++++||+++.---...|.++.+ .+..++ ..+|++
T Consensus 1 lFISDlHL~~~~--------p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 1 LFISDLHLGPKR--------PALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred CeeeccccCCCC--------cHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEE
Confidence 368999987532 222233333443322 356999999999954211123444333 333444 469999
Q ss_pred EecCCCCc
Q 006591 406 TAIGNHER 413 (639)
Q Consensus 406 ~v~GNHD~ 413 (639)
.+.||||+
T Consensus 72 ~i~GN~Df 79 (237)
T COG2908 72 YIHGNHDF 79 (237)
T ss_pred EecCchHH
Confidence 99999996
|
|
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00017 Score=74.03 Aligned_cols=176 Identities=17% Similarity=0.159 Sum_probs=89.9
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||.=.. ||...+.+.|-+..++.++||++..||++-.. +.. ....+.+..+ .+-++ +
T Consensus 1 ~ilfigdi~g~-----------~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~~--G~D~i-T 63 (255)
T cd07382 1 KILFIGDIVGK-----------PGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT---PKIAKELLSA--GVDVI-T 63 (255)
T ss_pred CEEEEEeCCCH-----------HHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC---HHHHHHHHhc--CCCEE-E
Confidence 57899996421 33333334443333457899999999998543 222 2222333222 44444 4
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhh
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTE--HDWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~--~~~~~g~~Q~~WL~~~La~ 485 (639)
.|||+++... .+..-+.. . ...+ .-..|.......|..++.+++++-+++-. ........-++-+++.+++
T Consensus 64 lGNH~fD~ge---l~~~l~~~--~-~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~ 136 (255)
T cd07382 64 MGNHTWDKKE---ILDFIDEE--P-RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEE 136 (255)
T ss_pred ecccccCcch---HHHHHhcC--c-CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHH
Confidence 5999997431 10000000 0 0000 00122222235578888888776665532 1111111123345566655
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
.+. +...+||.+|--.. . + ...+.. .-.-+||+++.||.|..-
T Consensus 137 lk~-~~D~IIV~~H~g~t-------s--E--k~ala~-~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 137 LKE-EADIIFVDFHAEAT-------S--E--KIALGW-YLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred Hhc-CCCEEEEEECCCCC-------H--H--HHHHHH-hCCCCceEEEeCCCCccC
Confidence 433 56789999997431 0 1 112221 113369999999999853
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00043 Score=71.42 Aligned_cols=175 Identities=17% Similarity=0.149 Sum_probs=96.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+|++++||.=.. || ...+...+..++ +.++||++..||++-.+ +... ...+.+.. ..+-++
T Consensus 1 m~ilfiGDi~G~-----------~G-r~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~---~~~~~L~~--~GvDvi 63 (266)
T TIGR00282 1 IKFLFIGDVYGK-----------AG-RKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTL---KIYEFLKQ--SGVNYI 63 (266)
T ss_pred CeEEEEEecCCH-----------HH-HHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCH---HHHHHHHh--cCCCEE
Confidence 589999997521 22 234445555544 46799999999999432 2221 22222322 356665
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC-CCC-C--CHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH-DWW-L--NSEQYKWIQK 481 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~-~~~-~--g~~Q~~WL~~ 481 (639)
.. |||+++... .+..-+. ++ ...+....|....+..|..++.++.++-+++-.. .+. + ...-.+-+++
T Consensus 64 T~-GNH~~Dkge---~~~~i~~--~~--~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~ 135 (266)
T TIGR00282 64 TM-GNHTWFQKL---ILDVVIN--QK--DLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKE 135 (266)
T ss_pred Ec-cchhccCcH---HHHHHhc--cc--cccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHH
Confidence 55 999997421 1100000 00 0111123333333456777888887777766432 111 1 1112233455
Q ss_pred HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 482 DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 482 ~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
.+++.+ .+++.+||.+|--. +. .+.....+-+-+|++|+.-|.|..
T Consensus 136 ~i~~lk-~~~d~IIVd~Haea-----------ts-EK~a~~~~ldg~vsaVvGtHtHV~ 181 (266)
T TIGR00282 136 LINMLK-KDCDLIFVDFHAET-----------TS-EKNAFGMAFDGYVTAVVGTHTHVP 181 (266)
T ss_pred HHHhhh-cCCCEEEEEeCCCC-----------HH-HHHHHHHHhCCCccEEEeCCCCCC
Confidence 555443 24678999999653 11 234456677789999999999984
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.5e-05 Score=87.28 Aligned_cols=85 Identities=16% Similarity=0.199 Sum_probs=59.1
Q ss_pred eEEEEEecCCCCC-CCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhhhh-cCCce
Q 006591 328 MKFLAYGDMGKAP-RDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITPVA-SRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~-~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~l~-~~vP~ 404 (639)
+||++.+|+|.+. ...... ........+.++++.+.+.++||||++||+.+..... ..-..+.+.++.+. .++|+
T Consensus 1 mkilHtSD~HLG~~~~~~~~--r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv 78 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPS--RLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPV 78 (390)
T ss_pred CeeEEecccccchhhccCcc--chHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcE
Confidence 5899999999983 211100 1112356778888888889999999999999764322 22234555565553 47999
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+++.||||..
T Consensus 79 ~~I~GNHD~~ 88 (390)
T COG0420 79 VVIAGNHDSP 88 (390)
T ss_pred EEecCCCCch
Confidence 9999999974
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00019 Score=75.16 Aligned_cols=202 Identities=15% Similarity=0.106 Sum_probs=91.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-----CCCcEEEEcCCccccCCcHHHHH---HHHHhhhhhh
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-----GNVDSVFHIGDISYATGFLVEWD---FFLHQITPVA 399 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-----~~pDfVl~~GDl~y~~g~~~~wd---~f~~~l~~l~ 399 (639)
++++..+|+|..-.... ...+....+..+++++++ ...-+++.+||+..... ...+. .-.+.+..+
T Consensus 1 ltIl~tnD~Hg~l~~~~----~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~-~~~~~~g~~~~~~~n~~- 74 (285)
T cd07405 1 ITILHTNDHHGHFWPNG----TGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVP-ESDLQDAEPDFRGMNLV- 74 (285)
T ss_pred CEEEEEcccccccccCC----CCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCch-hHHhcCcchHHHHHHhh-
Confidence 47899999996532210 112234445555555443 23458889999984322 22221 112222222
Q ss_pred cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEE--EeCCCCC---CC---
Q 006591 400 SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTV--ISTEHDW---WL--- 471 (639)
Q Consensus 400 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~--LDT~~~~---~~--- 471 (639)
..- ..++||||+++.... +................+.......-..|..++.+++++-+ +-+.... ..
T Consensus 75 -g~D-a~~~GNHEfD~G~~~--L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~ 150 (285)
T cd07405 75 -GYD-AMAVGNHEFDNPLEV--LRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYF 150 (285)
T ss_pred -CCc-EEeecccccccCHHH--HHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCc
Confidence 333 346799999752110 00000000000000000000000011346677888866544 4332110 00
Q ss_pred -C---HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 472 -N---SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 472 -g---~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+ .+..+=+++.+++....+..-+|++.|-.............. ...+...+...+||++|.||.|...
T Consensus 151 ~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~~~--~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 151 EGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNAPG--DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccCch--HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 0 112222333333322235677999999987543211111011 1223333323589999999999865
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.1e-05 Score=84.40 Aligned_cols=85 Identities=18% Similarity=0.248 Sum_probs=56.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cH-HHHHHHHH-hhhhhh-cCCc
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FL-VEWDFFLH-QITPVA-SRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~-~~wd~f~~-~l~~l~-~~vP 403 (639)
+||++++|+|.+..... ..........++++++.+.+.++|+|+++||+.+... .. .......+ .++.+. ..+|
T Consensus 1 MKilhiSD~HLG~~~~~--~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~ 78 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD--PWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGIT 78 (340)
T ss_pred CeEEEEeeecCCCcCCC--hhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 58999999998753211 1111113467788888888899999999999997642 22 22222222 233332 3799
Q ss_pred eEEecCCCCcC
Q 006591 404 YMTAIGNHERD 414 (639)
Q Consensus 404 ~~~v~GNHD~~ 414 (639)
++.++||||..
T Consensus 79 v~~I~GNHD~~ 89 (340)
T PHA02546 79 LHVLVGNHDMY 89 (340)
T ss_pred EEEEccCCCcc
Confidence 99999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00015 Score=89.78 Aligned_cols=194 Identities=17% Similarity=0.136 Sum_probs=96.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEE-cCCccccCCcHH--HHHHHHHhhhhhhcCCc
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFH-IGDISYATGFLV--EWDFFLHQITPVASRVS 403 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~-~GDl~y~~g~~~--~wd~f~~~l~~l~~~vP 403 (639)
.+++++++|+|..- . ....+..+++++++.+++.++. +||++....... +.....+.+..+ -.
T Consensus 660 ~l~Il~~nD~Hg~l-~----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l---g~ 725 (1163)
T PRK09419 660 ELTILHTNDFHGHL-D----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM---GY 725 (1163)
T ss_pred EEEEEEEeecccCC-C----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc---CC
Confidence 58999999999432 1 1344566666666677887766 999985432211 112233333322 22
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCC-Ccccccccc-ccCC-------CCCC----CCCCeEEEEeCCEE--EEEEeCCCC
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSG-GECGIPYET-YFPM-------PTPS----KDRPWYSIEQASVH--FTVISTEHD 468 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsg-ge~~~~y~~-~f~~-------P~~~----~~~~~Ysfd~G~v~--fi~LDT~~~ 468 (639)
-+.++||||+++....-.-.....+ .+....|.. .|++ ...+ .-..|.-++.++++ ||.+-+..-
T Consensus 726 d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~ 805 (1163)
T PRK09419 726 DASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPET 805 (1163)
T ss_pred CEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEeccccc
Confidence 3569999999743210000000000 000000100 0110 0000 01356677888855 555544310
Q ss_pred --C-CC-------CHHHHHHHHHHHhhcc-CCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCc
Q 006591 469 --W-WL-------NSEQYKWIQKDLASVD-RSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGH 536 (639)
Q Consensus 469 --~-~~-------g~~Q~~WL~~~La~~~-r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH 536 (639)
+ .+ -....+.+++..++.. ..+...+|++.|......... . ......|.++. +||++|.||
T Consensus 806 ~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~-----~~~~~~lA~~v~gIDvIigGH 878 (1163)
T PRK09419 806 AYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--G-----EITGLELAKKVKGVDAIISAH 878 (1163)
T ss_pred ccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--c-----ccHHHHHHHhCCCCCEEEeCC
Confidence 0 00 1122333444444432 245778999999987543211 1 11223444443 799999999
Q ss_pred ccccc
Q 006591 537 VHNYE 541 (639)
Q Consensus 537 ~H~Ye 541 (639)
.|..-
T Consensus 879 sH~~~ 883 (1163)
T PRK09419 879 THTLV 883 (1163)
T ss_pred CCccc
Confidence 99854
|
|
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=3e-05 Score=85.13 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=54.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHH-HHHHHHhhhhhh-cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVE-WDFFLHQITPVA-SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~-wd~f~~~l~~l~-~~vP~~ 405 (639)
+||++++|+|.+........ .......++++++.+.+.+||+|+++||+.+....... ...+.+.+..+. ..+|++
T Consensus 1 mkilh~SDlHlG~~~~~~~~--~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~ 78 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSR--AAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLV 78 (407)
T ss_pred CEEEEEcccCCCCcccCccc--HHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEE
Confidence 58999999998743110000 00123456778888888999999999999965432221 122333333332 368999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
+++||||..
T Consensus 79 ~I~GNHD~~ 87 (407)
T PRK10966 79 VLAGNHDSV 87 (407)
T ss_pred EEcCCCCCh
Confidence 999999973
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00036 Score=72.98 Aligned_cols=197 Identities=16% Similarity=0.174 Sum_probs=92.2
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcCh----HHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH----HHHHHHHhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGS----LSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV----EWDFFLHQIT 396 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~----~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~----~wd~f~~~l~ 396 (639)
..++|+..+|+|..-....... ...+. ...++++.+..++.+++ +++..||......... .+....+.+
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~-~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~m- 81 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDP-NYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIF- 81 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcc-cccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHH-
Confidence 4689999999996422110000 01111 22234443333334555 6778999985432211 222222333
Q ss_pred hhhcCCce-EEecCCCCcCCCCCCCcc-C--CCCCCCc--cccccccc---cCCCCCCCCCCeEEEEeC-CEE--EEEEe
Q 006591 397 PVASRVSY-MTAIGNHERDYVNSGSVY-S--TPDSGGE--CGIPYETY---FPMPTPSKDRPWYSIEQA-SVH--FTVIS 464 (639)
Q Consensus 397 ~l~~~vP~-~~v~GNHD~~~~~~~~~y-~--~~dsgge--~~~~y~~~---f~~P~~~~~~~~Ysfd~G-~v~--fi~LD 464 (639)
..+++ ..++||||+++...+-.+ . .+..... |...+... ...| .-..|..++.+ +++ ||.+-
T Consensus 82 ---N~mgyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~---~~~~y~i~~~~~G~kIgiiGlt 155 (282)
T cd07407 82 ---RMMPYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVP---IGSRYRKFTTKHGLRVLAFGFL 155 (282)
T ss_pred ---HhcCCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccc---cccceEEEEcCCCcEEEEEEEe
Confidence 33343 568999999642211000 0 0000000 00000000 0001 01246667776 655 55554
Q ss_pred CCCCC-------CC--CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCe-EEE
Q 006591 465 TEHDW-------WL--NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVD-LVL 533 (639)
Q Consensus 465 T~~~~-------~~--g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vd-lvl 533 (639)
+.... .. ...+.+|+.+.|++ .+..-+|+++|-...... ...+....+.++. ++| ++|
T Consensus 156 t~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 156 FDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred cccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEE
Confidence 43210 11 12233488777873 356779999998864331 1111122334444 577 799
Q ss_pred eCcccccc
Q 006591 534 FGHVHNYE 541 (639)
Q Consensus 534 sGH~H~Ye 541 (639)
.||.|...
T Consensus 225 ~GHsH~~~ 232 (282)
T cd07407 225 GGHSHVRD 232 (282)
T ss_pred eCCccccc
Confidence 99999753
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00044 Score=79.02 Aligned_cols=184 Identities=16% Similarity=0.148 Sum_probs=90.1
Q ss_pred eEEEEEecCCCCCCCCCC------c-cccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHH--HHHHHHHhhhh
Q 006591 328 MKFLAYGDMGKAPRDAST------E-HYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLV--EWDFFLHQITP 397 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~------~-~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~--~wd~f~~~l~~ 397 (639)
++|+.+.|+|..-..... + .....+....+..+++++++..+ -+++.+||+........ ..+.-.+.+..
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~ 80 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNA 80 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhc
Confidence 578999999864221100 0 01122345566666666654444 57889999985432111 11122222222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCC-------CC----CCCCCeEEEEeCC--EEEEE
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMP-------TP----SKDRPWYSIEQAS--VHFTV 462 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P-------~~----~~~~~~Ysfd~G~--v~fi~ 462 (639)
+ --=..++||||+++.... . ..+. ..|++- .. ..-..|..++.++ +-||.
T Consensus 81 ~---g~Da~~lGNHEFd~G~~~--l----------~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiG 145 (550)
T TIGR01530 81 A---GFDFFTLGNHEFDAGNEG--L----------KEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIG 145 (550)
T ss_pred c---CCCEEEeccccccCCHHH--H----------HHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEE
Confidence 1 223578999999752110 0 0000 001100 00 0113567788888 55677
Q ss_pred EeCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEE
Q 006591 463 ISTEHD-W---WLN-----SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLV 532 (639)
Q Consensus 463 LDT~~~-~---~~g-----~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vdlv 532 (639)
|.+... . .++ ....+=+++..+...+....-+|++.|..... + ..+.++. +||++
T Consensus 146 l~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~la~~~~~iD~I 210 (550)
T TIGR01530 146 LDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CEIAQKINDIDVI 210 (550)
T ss_pred eecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HHHHhcCCCCCEE
Confidence 754211 0 111 01122233322222224567799999976321 1 1233333 79999
Q ss_pred EeCcccccc
Q 006591 533 LFGHVHNYE 541 (639)
Q Consensus 533 lsGH~H~Ye 541 (639)
|.||.|.+-
T Consensus 211 igGHsH~~~ 219 (550)
T TIGR01530 211 VSGDSHYLL 219 (550)
T ss_pred EeCCCCccc
Confidence 999999954
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00025 Score=81.19 Aligned_cols=199 Identities=16% Similarity=0.147 Sum_probs=91.0
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-----CCCcEEEEcCCccccCCcHHHHH---HHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-----GNVDSVFHIGDISYATGFLVEWD---FFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-----~~pDfVl~~GDl~y~~g~~~~wd---~f~~~l~~ 397 (639)
..++|+.++|+|..-.... + ..+....+..+++.+++ ...-+++..||+.... ....+. ...+.+..
T Consensus 33 ~~ltil~tnD~Hg~~~~~~---~-~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g~~~i~~mN~ 107 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNE---Y-GEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFRGMNL 107 (551)
T ss_pred eEEEEEEecccCCCccccc---c-CCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCCchhHHHHhc
Confidence 4689999999997532110 0 01123334444444432 2345788899998432 122221 11222222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--c-ccCCCCCCCCCCeEEEEeCCEEE--EEEeCCCC--C-
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--T-YFPMPTPSKDRPWYSIEQASVHF--TVISTEHD--W- 469 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~-~f~~P~~~~~~~~Ysfd~G~v~f--i~LDT~~~--~- 469 (639)
+ ..- ..++||||+++... .+.... .+..-++- . +........-..|..++.+++++ |.+-+... +
T Consensus 108 ~--g~D-a~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 108 I--GYD-AMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred C--CCC-EEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 1 333 45679999975321 000000 00000000 0 00000000113567778888654 54433221 1
Q ss_pred CC-------CHHHHHHHHHHHhhccC-CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC---CCeEEEeCccc
Q 006591 470 WL-------NSEQYKWIQKDLASVDR-SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN---KVDLVLFGHVH 538 (639)
Q Consensus 470 ~~-------g~~Q~~WL~~~La~~~r-~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y---~VdlvlsGH~H 538 (639)
.+ -....+-+++..++... .+..-+|++.|.............. .-..|.++. +||++|.||.|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~~~~~-----~d~~la~~~~~~~IDvIlgGHsH 255 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHGSNAP-----GDVEMARSLPAGGLDMIVGGHSQ 255 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccCCCCc-----cHHHHHHhCCccCceEEEeCCCC
Confidence 00 01112223333333322 4577899999988754321110000 002233333 79999999999
Q ss_pred ccc
Q 006591 539 NYE 541 (639)
Q Consensus 539 ~Ye 541 (639)
..-
T Consensus 256 ~~~ 258 (551)
T PRK09558 256 DPV 258 (551)
T ss_pred ccc
Confidence 854
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00031 Score=79.84 Aligned_cols=202 Identities=15% Similarity=0.155 Sum_probs=100.3
Q ss_pred CceEEEEEecCCCCCCCCCCccccC-cChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHH---HHHHHHhhhhhhc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQ-PGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVE---WDFFLHQITPVAS 400 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~-pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~---wd~f~~~l~~l~~ 400 (639)
-.++|+..+|+|..-.......... .+....+..+++++++. +..++|.+||+......... .....+.|..+
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m-- 102 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL-- 102 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhc--
Confidence 4799999999997654211111111 23344555566665554 44689999999965332221 12222222222
Q ss_pred CCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCCCCC--CCCCeEEEEeCCEE--EEEEeCCC--CCC--
Q 006591 401 RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMPTPS--KDRPWYSIEQASVH--FTVISTEH--DWW-- 470 (639)
Q Consensus 401 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P~~~--~~~~~Ysfd~G~v~--fi~LDT~~--~~~-- 470 (639)
. .=..++||||+++.... .. ... .+...++- ..+.-+... .-+.|.-++.++++ +|.+.+.. .+.
T Consensus 103 ~-yDa~tiGNHEFd~g~~~--l~-~~~-~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~ 177 (517)
T COG0737 103 G-YDAMTLGNHEFDYGLEA--LA-RLL-DEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKP 177 (517)
T ss_pred C-CcEEeecccccccCHHH--HH-HHH-hccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccc
Confidence 1 22568999999753210 00 000 00000000 000001111 12568889999855 45554311 111
Q ss_pred ------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 471 ------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 471 ------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
.-....+++++.+.+.......-+|++.|-+.............. ... .. .++|+++.||.|.+
T Consensus 178 ~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~~-~~~----~~-~~iD~i~~GH~H~~ 247 (517)
T COG0737 178 NAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPGD-VDV----AV-PGIDLIIGGHSHTV 247 (517)
T ss_pred cccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccccc-ccc----cc-cCcceEeccCCccc
Confidence 112445666666666544336779999999986554311110000 000 00 34999999999974
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00044 Score=73.45 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=26.0
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccc
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYE 541 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~Ye 541 (639)
.+..-+|++.|-.-+. .+ ..|.++. +||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCccC
Confidence 4567799999974211 11 1344454 79999999999864
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00015 Score=68.53 Aligned_cols=56 Identities=13% Similarity=0.129 Sum_probs=36.2
Q ss_pred HHHHHHHHH-hhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCC
Q 006591 355 SVVKAMSDE-VNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHE 412 (639)
Q Consensus 355 ~~~~~l~~~-i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD 412 (639)
++++++.+. -++.+.|++|.+||+.-.+....+|..+..- .....+|.|++-|||+
T Consensus 12 ~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 12 ALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 445555442 2357899999999999654443344444432 2235789999999996
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00015 Score=70.08 Aligned_cols=83 Identities=16% Similarity=0.252 Sum_probs=51.8
Q ss_pred EEEecCCCCCCCCCC-ccccCcC--hHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH--HHHHHHHHhhhhhhcCCceE
Q 006591 331 LAYGDMGKAPRDAST-EHYIQPG--SLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL--VEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~-~~~~~pg--~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~--~~wd~f~~~l~~l~~~vP~~ 405 (639)
++++|+|.+...... .....|. ....++++.+.+++.+||.|+++||+++..... .++... .........+|++
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~-~~~~~~~~~~~v~ 79 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEV-AFLRLLAKDVDVI 79 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHH-HHHHhccCCCeEE
Confidence 468999987532100 0011111 236778888888889999999999999654321 222221 1233334678999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 80 ~i~GNHD~~ 88 (172)
T cd07391 80 LIRGNHDGG 88 (172)
T ss_pred EEcccCccc
Confidence 999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00028 Score=71.31 Aligned_cols=84 Identities=14% Similarity=0.163 Sum_probs=57.3
Q ss_pred eEEEEEecCCCCCCCCCCcc-ccCc--ChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEH-YIQP--GSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~-~~~p--g~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
-+.++++|.|.+........ ...| ...++++++.+.+++.+||.|+++||+.+.......|+.+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 47889999998743210000 0011 12357778888777889999999999997655435566666666554 3589
Q ss_pred EEecCCCCc
Q 006591 405 MTAIGNHER 413 (639)
Q Consensus 405 ~~v~GNHD~ 413 (639)
+.+.||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999996
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00049 Score=69.99 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=45.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhh-hcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPV-ASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l-~~~vP~ 404 (639)
++++++||+|.. ...++++++.+... ..|.++++||+++.+.. +. ...+.+..+ ....++
T Consensus 1 m~~~~IsDIHG~--------------~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~-s~--~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 1 MAIYVVPDIHGE--------------YQKLLTIMDKINNERKPEETIVFLGDYVDRGKR-SK--DVVNYIFDLMSNDDNV 63 (235)
T ss_pred CeEEEEECCCCC--------------HHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC-hH--HHHHHHHHHhhcCCCe
Confidence 478999999942 34467777776433 36999999999975432 21 222222222 234578
Q ss_pred EEecCCCCc
Q 006591 405 MTAIGNHER 413 (639)
Q Consensus 405 ~~v~GNHD~ 413 (639)
++++||||.
T Consensus 64 ~~l~GNHE~ 72 (235)
T PHA02239 64 VTLLGNHDD 72 (235)
T ss_pred EEEECCcHH
Confidence 999999996
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0006 Score=69.66 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=49.7
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-----CCcEEEEcCCccccCC----c---------HHHHHHHH
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-----NVDSVFHIGDISYATG----F---------LVEWDFFL 392 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-----~pDfVl~~GDl~y~~g----~---------~~~wd~f~ 392 (639)
++++|+|.+.... ....++.+.+.+... ++|.|+++||+++... . ...++.+.
T Consensus 2 ~~iSDlHl~~~~~---------~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (243)
T cd07386 2 VFISDVHVGSKTF---------LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAA 72 (243)
T ss_pred EEecccCCCchhh---------hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHH
Confidence 6889999764210 122344555555433 5799999999996521 0 12345566
Q ss_pred HhhhhhhcCCceEEecCCCCcC
Q 006591 393 HQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 393 ~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
+.++.+...+|++.++||||..
T Consensus 73 ~~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 73 EYLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHHHhcccCCeEEEeCCCCCcc
Confidence 6777777789999999999973
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00069 Score=70.50 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=47.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
++++++||+|. ....++++++.+. +.+.|.++++||+++.+... .+.++.+..+ ..++.+
T Consensus 1 M~~~vIGDIHG--------------~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s---~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 1 MATYAIGDIQG--------------CYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS---LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred CcEEEEEccCC--------------CHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCH---HHHHHHHHhc--CCCeEE
Confidence 46899999994 3566777877764 35789999999999654332 2333333333 346889
Q ss_pred ecCCCCc
Q 006591 407 AIGNHER 413 (639)
Q Consensus 407 v~GNHD~ 413 (639)
+.||||.
T Consensus 62 VlGNHD~ 68 (275)
T PRK00166 62 VLGNHDL 68 (275)
T ss_pred EecChhH
Confidence 9999997
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0027 Score=78.85 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=34.5
Q ss_pred ceEEEEEecCCCCCCCC--CCccccCcChHHHHHHHHHHhhcCCCcE-EEEcCCccccC
Q 006591 327 EMKFLAYGDMGKAPRDA--STEHYIQPGSLSVVKAMSDEVNNGNVDS-VFHIGDISYAT 382 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pDf-Vl~~GDl~y~~ 382 (639)
.++|+..+|+|..-... ........+....+..+++++++.+++. ++..||+....
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs 99 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGN 99 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCC
Confidence 59999999999653211 0000112234566677777776666664 55599999654
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0071 Score=71.58 Aligned_cols=56 Identities=16% Similarity=0.172 Sum_probs=32.6
Q ss_pred ceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccC
Q 006591 327 EMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYAT 382 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~ 382 (639)
.++|+..+|+|..-.... .......+-...+..+++++++..+ -++|..||++...
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGS 173 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGT 173 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCC
Confidence 689999999997532110 0000111224445556666654444 4788999999543
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.001 Score=67.66 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=46.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc----------CCCcEEEEcCCccccCCcHHHHHHHHHhhhhh
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN----------GNVDSVFHIGDISYATGFLVEWDFFLHQITPV 398 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~----------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l 398 (639)
+++++||+|. ....++++++.+.- .+.|.++++||+++.+... .+.++.+..+
T Consensus 2 ~i~vigDIHG--------------~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l 64 (234)
T cd07423 2 PFDIIGDVHG--------------CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSM 64 (234)
T ss_pred CeEEEEECCC--------------CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHH
Confidence 7899999994 35667778877631 1368999999999654332 2333444443
Q ss_pred hcCCceEEecCCCCc
Q 006591 399 ASRVSYMTAIGNHER 413 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~ 413 (639)
...-.+..+.||||.
T Consensus 65 ~~~~~~~~v~GNHE~ 79 (234)
T cd07423 65 VAAGAALCVPGNHDN 79 (234)
T ss_pred hhCCcEEEEECCcHH
Confidence 333467899999996
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0082 Score=70.90 Aligned_cols=56 Identities=11% Similarity=0.102 Sum_probs=33.2
Q ss_pred CceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCcccc
Q 006591 326 DEMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYA 381 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~ 381 (639)
-.++|+..+|+|..-.... .......+....+..+++++++..+ -++|..||++..
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 3699999999997642210 0001112234445666666654443 488899999954
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0012 Score=65.80 Aligned_cols=65 Identities=20% Similarity=0.201 Sum_probs=45.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|.. ...++++++.+.. .++|.++++||+++.+... .+.++.+. ..+++.+
T Consensus 2 ri~~isDiHg~--------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~v 60 (207)
T cd07424 2 RDFVVGDIHGH--------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHAV 60 (207)
T ss_pred CEEEEECCCCC--------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEEe
Confidence 68999999942 4566777776643 4699999999999754433 22333332 2468899
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||..
T Consensus 61 ~GNhe~~ 67 (207)
T cd07424 61 RGNHEQM 67 (207)
T ss_pred ECCChHH
Confidence 9999963
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0013 Score=67.48 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=45.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc---------CCCcEEEEcCCccccCCcHHHHHHHHHhhhhh
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN---------GNVDSVFHIGDISYATGFLVEWDFFLHQITPV 398 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~---------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l 398 (639)
+|++++||+|. ....+.++++.+.- ..-|.++++||+++.+.... +.++.+..+
T Consensus 1 ~~~~vIGDIHG--------------~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~---~vl~~~~~~ 63 (245)
T PRK13625 1 MKYDIIGDIHG--------------CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL---RMIEIVWEL 63 (245)
T ss_pred CceEEEEECcc--------------CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH---HHHHHHHHH
Confidence 47899999994 35667777776532 13478999999997543322 223333333
Q ss_pred hcCCceEEecCCCCc
Q 006591 399 ASRVSYMTAIGNHER 413 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~ 413 (639)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 334578999999995
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0017 Score=65.48 Aligned_cols=68 Identities=15% Similarity=0.199 Sum_probs=45.4
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--------CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--------NVDSVFHIGDISYATGFLVEWDFFLHQITPVASR 401 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--------~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~ 401 (639)
+.++||+|. ....++++++.+... ..|.++++||+++.+.... +.++.+..+...
T Consensus 1 ~~vIGDIHG--------------~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~ 63 (222)
T cd07413 1 YDFIGDIHG--------------HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDA 63 (222)
T ss_pred CEEEEeccC--------------CHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcC
Confidence 368999994 356788888776422 4689999999996544332 233333333333
Q ss_pred CceEEecCCCCcC
Q 006591 402 VSYMTAIGNHERD 414 (639)
Q Consensus 402 vP~~~v~GNHD~~ 414 (639)
-.++.+.||||..
T Consensus 64 ~~~~~l~GNHE~~ 76 (222)
T cd07413 64 GHALAVMGNHEFN 76 (222)
T ss_pred CCEEEEEccCcHH
Confidence 4688999999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0021 Score=64.73 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=45.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|. ....++++++.+. ..+.|.++++||+++.+.... +.++.+. ...++.+
T Consensus 16 ri~visDiHg--------------~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHG--------------EYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFISV 74 (218)
T ss_pred eEEEEEeccC--------------CHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcEEE
Confidence 9999999994 3566777777765 457899999999997544332 2222222 2246899
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 75 ~GNHE~ 80 (218)
T PRK09968 75 KGNHEA 80 (218)
T ss_pred ECchHH
Confidence 999996
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0021 Score=61.91 Aligned_cols=78 Identities=18% Similarity=0.166 Sum_probs=44.9
Q ss_pred EEEecCCCCCCCCCC-ccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 331 LAYGDMGKAPRDAST-EHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~-~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
.+++|+|.+...... +....+......+++.+.+.+ .++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 478999987642110 000001122334555555443 36899999999996543 2222 3333332 4689999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.011 Score=69.04 Aligned_cols=88 Identities=11% Similarity=0.152 Sum_probs=46.4
Q ss_pred CceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHH--------Hh
Q 006591 326 DEMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFL--------HQ 394 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~--------~~ 394 (639)
..++++..+|+|..-.... .......+....+..+++++++..+ -+++..||+...... ..|..+. ..
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHPV 102 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcchH
Confidence 4799999999997532210 0000111234455666666654433 478889999954322 2221110 01
Q ss_pred hhhhhcCCc-eEEecCCCCcCC
Q 006591 395 ITPVASRVS-YMTAIGNHERDY 415 (639)
Q Consensus 395 l~~l~~~vP-~~~v~GNHD~~~ 415 (639)
++- +..+. =..++||||+++
T Consensus 103 i~a-mN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 103 YKA-MNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHH-HHhcCCcEEeccchhhhc
Confidence 111 11222 256799999975
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0028 Score=65.93 Aligned_cols=71 Identities=15% Similarity=0.106 Sum_probs=43.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc------CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCC
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN------GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRV 402 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~v 402 (639)
+++++||+|.. ...++++++.+.. ...+.++++||+++.+....+--.++..+.......
T Consensus 3 ~iyaIGDIHG~--------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~ 68 (304)
T cd07421 3 VVICVGDIHGY--------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQ 68 (304)
T ss_pred eEEEEEeccCC--------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhccccc
Confidence 68999999943 4566666665532 235689999999976544333222222222111112
Q ss_pred ceEEecCCCCc
Q 006591 403 SYMTAIGNHER 413 (639)
Q Consensus 403 P~~~v~GNHD~ 413 (639)
.++++.||||.
T Consensus 69 ~vv~LrGNHE~ 79 (304)
T cd07421 69 RHVFLCGNHDF 79 (304)
T ss_pred ceEEEecCChH
Confidence 47889999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.011 Score=68.76 Aligned_cols=88 Identities=14% Similarity=0.230 Sum_probs=44.9
Q ss_pred ceEEEEEecCCCCCCCCC--CccccCcChHHHHHHHHHHhhcCC-CcEEEEcCCccccCCcHHHHHHHH-------Hhhh
Q 006591 327 EMKFLAYGDMGKAPRDAS--TEHYIQPGSLSVVKAMSDEVNNGN-VDSVFHIGDISYATGFLVEWDFFL-------HQIT 396 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~--~~~~~~pg~~~~~~~l~~~i~~~~-pDfVl~~GDl~y~~g~~~~wd~f~-------~~l~ 396 (639)
.++++..+|+|..-.... .......+....+..+++++++.. --+++..||+...... ..|.... +.+-
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 479999999997532210 000011122445556666655433 3578889999954332 1121110 0011
Q ss_pred hhhcCCce-EEecCCCCcCC
Q 006591 397 PVASRVSY-MTAIGNHERDY 415 (639)
Q Consensus 397 ~l~~~vP~-~~v~GNHD~~~ 415 (639)
.++..+.+ ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 11122222 46799999974
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0023 Score=64.30 Aligned_cols=64 Identities=16% Similarity=0.131 Sum_probs=45.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|. ....++++++.+... +.|-++++||+++.+.... +.++.+. ...+..+
T Consensus 18 ri~vigDIHG--------------~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~---~vl~~l~----~~~~~~v 76 (218)
T PRK11439 18 HIWLVGDIHG--------------CFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL---RCLQLLE----EHWVRAV 76 (218)
T ss_pred eEEEEEcccC--------------CHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH---HHHHHHH----cCCceEe
Confidence 9999999994 356788888887543 6899999999996544332 2223222 2246789
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 77 ~GNHE~ 82 (218)
T PRK11439 77 RGNHEQ 82 (218)
T ss_pred eCchHH
Confidence 999996
|
|
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0032 Score=63.13 Aligned_cols=67 Identities=15% Similarity=0.131 Sum_probs=44.9
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhc-CCceEEecC
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVAS-RVSYMTAIG 409 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~-~vP~~~v~G 409 (639)
.++||+|.. ...+.++++.+.....|.++++||+++.+... .+.++.+..+.. ..+++.+.|
T Consensus 1 ~~igDiHg~--------------~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~---~~~l~~l~~~~~~~~~~~~l~G 63 (225)
T cd00144 1 YVIGDIHGC--------------LDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDS---VEVIDLLLALKILPDNVILLRG 63 (225)
T ss_pred CEEeCCCCC--------------HHHHHHHHHHhCCCCCCEEEEECCEeCCCCCc---HHHHHHHHHhcCCCCcEEEEcc
Confidence 378999942 45677777777667899999999999654322 122222222211 457899999
Q ss_pred CCCcC
Q 006591 410 NHERD 414 (639)
Q Consensus 410 NHD~~ 414 (639)
|||..
T Consensus 64 NHe~~ 68 (225)
T cd00144 64 NHEDM 68 (225)
T ss_pred Cchhh
Confidence 99974
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0043 Score=63.95 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 331 LAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 331 ~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
.++||+|. ....++++++.+.. .+.|.++++||+++.+.... +.++.+..+ ...+..+.|
T Consensus 2 yvIGDIHG--------------~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l--~~~v~~VlG 62 (257)
T cd07422 2 YAIGDIQG--------------CYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSL---ETLRFVKSL--GDSAKTVLG 62 (257)
T ss_pred EEEECCCC--------------CHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHH---HHHHHHHhc--CCCeEEEcC
Confidence 58999994 35678888887753 46899999999996543332 233444333 236789999
Q ss_pred CCCcC
Q 006591 410 NHERD 414 (639)
Q Consensus 410 NHD~~ 414 (639)
|||..
T Consensus 63 NHD~~ 67 (257)
T cd07422 63 NHDLH 67 (257)
T ss_pred CchHH
Confidence 99973
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.31 Score=49.20 Aligned_cols=178 Identities=18% Similarity=0.151 Sum_probs=98.9
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+=.. +|...+.+.|-....+.++||||..|-++ +.|..--|+.+.+.++. .+- +.+
T Consensus 1 mriLfiGDvvGk-----------~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT 64 (266)
T COG1692 1 MRILFIGDVVGK-----------PGRKAVKEHLPQLKSKYKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VIT 64 (266)
T ss_pred CeEEEEecccCc-----------chHHHHHHHhHHHHHhhcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEe
Confidence 589999997522 34444444443333457899999999999 56665556666665543 444 467
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC--CCCC-CHHHHHHHHHHHh
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH--DWWL-NSEQYKWIQKDLA 484 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~--~~~~-g~~Q~~WL~~~La 484 (639)
.|||=++....-+ |-.. ....-+-.+.|....+..|+-|...+..+.+++-.- .... -..-..=+++.|.
T Consensus 65 ~GNH~wd~~ei~~-~i~~------~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~ 137 (266)
T COG1692 65 LGNHTWDQKEILD-FIDN------ADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLD 137 (266)
T ss_pred cccccccchHHHH-Hhhc------ccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHH
Confidence 9999875321100 0000 000111122343344566888888777776666421 1110 1122333556666
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+.+ .+++.+||-+|.--.+... . .-.+-+-+|.+|+.=|+|.-.
T Consensus 138 ~~~-~~~~~iiVDFHAEtTSEK~-----------a-~g~yldGrvsavvGTHTHV~T 181 (266)
T COG1692 138 EIK-LGTDLIIVDFHAETTSEKN-----------A-FGWYLDGRVSAVVGTHTHVPT 181 (266)
T ss_pred hCc-cCCceEEEEccccchhhhh-----------h-hheEEcCeEEEEEeccCcccc
Confidence 543 4557799989965432221 1 111224468899999999743
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.035 Score=57.12 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=77.5
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----------cCCCcEEEEcCCccccCCc--------------
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----------NGNVDSVFHIGDISYATGF-------------- 384 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----------~~~pDfVl~~GDl~y~~g~-------------- 384 (639)
+++++|+|.+.... ....++.+.+.+. ..++.-++++||.+...+.
T Consensus 2 i~~vSgL~ig~~~~---------~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~ 72 (257)
T cd07387 2 IALVSGLGLGGNAE---------SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKK 72 (257)
T ss_pred EEEEcccccCCCcc---------chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccc
Confidence 68899999875421 1223344444432 2345679999999965432
Q ss_pred -----HHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCcccccc-ccccCCCC-----CCCCCCeEEE
Q 006591 385 -----LVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPY-ETYFPMPT-----PSKDRPWYSI 453 (639)
Q Consensus 385 -----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y-~~~f~~P~-----~~~~~~~Ysf 453 (639)
..+.+++-..+..+.+.+|+...|||||-... ..| +.++ +..|+.-. ....+. |.|
T Consensus 73 ~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~------~lP------Qqplh~~lfp~s~~~~~~~~vtNP-~~~ 139 (257)
T cd07387 73 SSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANH------SLP------QQPLHRCLFPKSSNYSTLNLVTNP-YEF 139 (257)
T ss_pred cchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccc------cCC------CCCCCHHHhhcccccCCcEEeCCC-eEE
Confidence 22344555666777789999999999996311 011 1122 11221110 001233 469
Q ss_pred EeCCEEEEEEeCCC-----CCCCCHHHHHHHHHHHhh
Q 006591 454 EQASVHFTVISTEH-----DWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 454 d~G~v~fi~LDT~~-----~~~~g~~Q~~WL~~~La~ 485 (639)
++++++|++.+... .+...+.-++.|+..|+-
T Consensus 140 ~i~g~~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 140 SIDGVRVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred EECCEEEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 99999999987653 123344456778888873
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.05 Score=59.76 Aligned_cols=84 Identities=14% Similarity=0.280 Sum_probs=56.3
Q ss_pred CCCCCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----cCCCcEEEEcCCccccCC-------------
Q 006591 322 AGGSDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----NGNVDSVFHIGDISYATG------------- 383 (639)
Q Consensus 322 ~~g~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----~~~pDfVl~~GDl~y~~g------------- 383 (639)
.++.+.+++++++|.|.+... + ....+..+++.+. +.+...++.+||+++.-|
T Consensus 220 ~~~~e~v~v~~isDih~GSk~-----F----~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~d 290 (481)
T COG1311 220 NTGDERVYVALISDIHRGSKE-----F----LEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIAD 290 (481)
T ss_pred CCCCcceEEEEEeeeecccHH-----H----HHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCccccccccc
Confidence 344467999999999986421 1 1233444444442 234578999999996432
Q ss_pred cHHHHHHHHHhhhhhhcCCceEEecCCCCcC
Q 006591 384 FLVEWDFFLHQITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 384 ~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~ 414 (639)
...|++++.+.+..+-..+.+++.|||||..
T Consensus 291 i~~qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 291 IYEQYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred chHHHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 1235667777777777788899999999974
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.064 Score=50.26 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCC-CCccccCcCh--HHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 329 KFLAYGDMGKAPRDA-STEHYIQPGS--LSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~-~~~~~~~pg~--~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
.+-++||+|.+...- +...+.++.. ..++....+.+ ..-|.+.|+||++...... ......++.+..+ ..
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv--~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGr--kh 77 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTV--GPDDVLWHLGDLSSGANRE---RAAGLILERLNGR--KH 77 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcC--CccceEEEecccccccchh---hHHHHHHHHcCCc--EE
Confidence 456779999865321 1112222211 12222222222 3457899999999554432 2334455555333 38
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.++||||-.
T Consensus 78 lv~GNhDk~ 86 (186)
T COG4186 78 LVPGNHDKC 86 (186)
T ss_pred EeeCCCCCC
Confidence 899999963
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0068 Score=62.91 Aligned_cols=66 Identities=18% Similarity=0.280 Sum_probs=45.4
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+..++||+|. ....++++++++. +...|-++++||+++.+....+ .++.+..+ ...+..+
T Consensus 2 ~~YvIGDIHG--------------c~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sle---vL~~l~~l--~~~~~~V 62 (279)
T TIGR00668 2 ATYLIGDLHG--------------CYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLE---VLRYVKSL--GDAVRLV 62 (279)
T ss_pred cEEEEEcccC--------------CHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHH---HHHHHHhc--CCCeEEE
Confidence 5689999994 4567888888876 3467999999999976543322 22333332 1235689
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 63 lGNHD~ 68 (279)
T TIGR00668 63 LGNHDL 68 (279)
T ss_pred EChhHH
Confidence 999996
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.032 Score=58.66 Aligned_cols=173 Identities=21% Similarity=0.219 Sum_probs=92.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHH--HHhhcCCCcEEEEcCCccccCCc--------HHHHH---HHHHh
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMS--DEVNNGNVDSVFHIGDISYATGF--------LVEWD---FFLHQ 394 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~--~~i~~~~pDfVl~~GDl~y~~g~--------~~~wd---~f~~~ 394 (639)
+|+++-|+.|..- .++.+.+. +..-..++|++|..||+---+.. ...+. .|++.
T Consensus 1 MrIaVqGCcHG~L-------------d~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~Y 67 (456)
T KOG2863|consen 1 MRIAVQGCCHGEL-------------DNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKY 67 (456)
T ss_pred CceeeecccchhH-------------HHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHH
Confidence 5889999998421 11222221 11123589999999999633211 11222 34443
Q ss_pred hh-hhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC--CCCCeE-----EEEeCCEEEEEEeCC
Q 006591 395 IT-PVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS--KDRPWY-----SIEQASVHFTVISTE 466 (639)
Q Consensus 395 l~-~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~--~~~~~Y-----sfd~G~v~fi~LDT~ 466 (639)
.. ...+.+|.+++=||||... |.. -+|..+ ..+.|| ...+|++|+-.|+.-
T Consensus 68 Ysge~~APVlTIFIGGNHEAsn-------------------yL~--eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI 126 (456)
T KOG2863|consen 68 YSGEIKAPVLTIFIGGNHEASN-------------------YLQ--ELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGI 126 (456)
T ss_pred hCCcccCceeEEEecCchHHHH-------------------HHH--hcccCceeccceEEeeecceEEECCEEEeeccch
Confidence 32 2346788999999999631 111 112111 123444 367899999888752
Q ss_pred ---CCCCCC-----------------HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCc-----hhHHH-----
Q 006591 467 ---HDWWLN-----------------SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS-----VDKFF----- 516 (639)
Q Consensus 467 ---~~~~~g-----------------~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~-----~~~~~----- 516 (639)
+++..| -.+.+ ...|.+. +.|--|++.|.-+..-...... ..+-+
T Consensus 127 ~k~~dy~kgh~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie 201 (456)
T KOG2863|consen 127 YKEHDYRKGHFEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIE 201 (456)
T ss_pred hhhhhcccCCCCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHh
Confidence 232211 11111 1223332 3455688899655322210000 00111
Q ss_pred -----HHHHHHHHHhCCCeEEEeCcccc
Q 006591 517 -----VKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 517 -----r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
...++.||++.+....|+.|.|.
T Consensus 202 ~~~LGSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 202 EGKLGSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred cCCcCChHHHHHHHHhCcchhhhhhHhh
Confidence 24678899999999999999997
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.065 Score=54.51 Aligned_cols=88 Identities=18% Similarity=0.171 Sum_probs=49.6
Q ss_pred CeEEEEeCCE--EEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH
Q 006591 449 PWYSIEQASV--HFTVISTEHDWW----------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF 516 (639)
Q Consensus 449 ~~Ysfd~G~v--~fi~LDT~~~~~----------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~ 516 (639)
.+..++.+++ .|+.+.+..... ....-.+-+++.++++++ +...+|++.|-..-... .+. ..
T Consensus 122 ~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~--~p~---~~ 195 (239)
T cd07381 122 RPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSY--YPT---PE 195 (239)
T ss_pred CcEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCC--CCC---HH
Confidence 4556778774 455554432110 011112345555655533 37889999997552211 111 12
Q ss_pred HHHHHHHHHhCCCeEEEeCcccccce
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
...+...+.+.++|+++.||.|..+-
T Consensus 196 ~~~la~~l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 196 QRELARALIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred HHHHHHHHHHCCCCEEEcCCCCcCCC
Confidence 33455555567999999999998764
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.22 Score=50.69 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=37.2
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
-+++.+++++ .+...+|++.|-..-... .+. .. ...+..-+.+.++|+++.||.|..+..
T Consensus 161 ~i~~~i~~lr-~~~D~vIv~~H~G~e~~~--~p~--~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 161 KILADIARAR-KKADVVIVSLHWGVEYQY--EPT--DE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHHh-ccCCEEEEEecCccccCC--CCC--HH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 3455555543 357889999997763221 111 12 234444454578999999999987743
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.018 Score=57.99 Aligned_cols=86 Identities=13% Similarity=0.160 Sum_probs=54.0
Q ss_pred eEEEEEecCCCCCCCCCCcc--ccCc-ChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc--HHHHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEH--YIQP-GSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF--LVEWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~--~~~p-g~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~--~~~wd~f~~~l~~l~~~v 402 (639)
-+.++++|.|.+....-.+. +..+ ....+.+.+.+.+...+|+-++.+||+-.+-+. ..+|+.....++.+..+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~- 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER- 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC-
Confidence 48899999998743211010 1111 123455555556778999999999999877654 34455444444433323
Q ss_pred ceEEecCCCCcC
Q 006591 403 SYMTAIGNHERD 414 (639)
Q Consensus 403 P~~~v~GNHD~~ 414 (639)
-++.+.||||-.
T Consensus 99 evi~i~GNHD~~ 110 (235)
T COG1407 99 EVIIIRGNHDNG 110 (235)
T ss_pred cEEEEeccCCCc
Confidence 599999999964
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.041 Score=60.72 Aligned_cols=55 Identities=13% Similarity=0.170 Sum_probs=43.1
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT 382 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~ 382 (639)
+.+||++..|.|.+.... .......+..+++.|+..+++.++|+||..||+...+
T Consensus 12 ntirILVaTD~HlGY~Ek--D~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEK--DAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred cceEEEEeecCccccccC--CcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 579999999999865321 1122334678899999999999999999999999765
|
|
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.028 Score=57.31 Aligned_cols=168 Identities=16% Similarity=0.135 Sum_probs=93.9
Q ss_pred CcEEEEcCCccccCCcH-------HHHHHHHH----hhhhhhcCCceEEecCCCCcCCCCCC---CccCCCCCCCccccc
Q 006591 369 VDSVFHIGDISYATGFL-------VEWDFFLH----QITPVASRVSYMTAIGNHERDYVNSG---SVYSTPDSGGECGIP 434 (639)
Q Consensus 369 pDfVl~~GDl~y~~g~~-------~~wd~f~~----~l~~l~~~vP~~~v~GNHD~~~~~~~---~~y~~~dsgge~~~~ 434 (639)
|=-++..||++++.+-. .++.+|.. ...++...+|+|+-.||||.+-.+.. ..|. .| ...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyR-----rE-lrd 200 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYR-----RE-LRD 200 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHH-----HH-HHH
Confidence 33467778999775421 12222221 12233346899999999998743321 0110 00 011
Q ss_pred ccc-------ccC--CCCC--CCCCCeEEEEeCCEEEEEEeCCCCCC-C-CHHHHHHHHHHHhhccCCCCCeEEEEeccC
Q 006591 435 YET-------YFP--MPTP--SKDRPWYSIEQASVHFTVISTEHDWW-L-NSEQYKWIQKDLASVDRSKTPWLIFAGHRP 501 (639)
Q Consensus 435 y~~-------~f~--~P~~--~~~~~~Ysfd~G~v~fi~LDT~~~~~-~-g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P 501 (639)
|-. .|. .|.. ...+.-||+++|++|.+-+.+...-. . ...-+-||+.+|........| ++++.|.-
T Consensus 201 yve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyG 279 (392)
T COG5555 201 YVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYG 279 (392)
T ss_pred HHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhC
Confidence 111 111 1111 12345789999999988776542110 1 122356999999875444444 88888976
Q ss_pred Cc--cCCCCCC--------------chhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 502 MY--SSLDGFL--------------SVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 502 ~y--~~~~~~~--------------~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
.- ++..+.+ -.....+..|...++-|+|...+.||.|.....
T Consensus 280 wdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ma 337 (392)
T COG5555 280 WDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNMA 337 (392)
T ss_pred ccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccccccccee
Confidence 52 2211100 001123678888999999999999999986443
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.43 Score=48.63 Aligned_cols=164 Identities=18% Similarity=0.150 Sum_probs=78.7
Q ss_pred cChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCc
Q 006591 351 PGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGE 430 (639)
Q Consensus 351 pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge 430 (639)
||...+.+.|-+..++.++|||+..|.++ +.|.---.+.+.++++ ..+-+ .+.|||=++...- +..-+.
T Consensus 10 ~Gr~~v~~~Lp~L~~~~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei---~~~i~~--- 78 (253)
T PF13277_consen 10 PGRRAVKEHLPELKEEYGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEI---FDFIDK--- 78 (253)
T ss_dssp HHHHHHHHHHHHHGG--G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTH---HHHHHH---
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHH---HHHHhc---
Confidence 34434444443334567999999999999 4554322233333222 24544 6789998763211 000000
Q ss_pred cccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCC
Q 006591 431 CGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTE--HDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDG 508 (639)
Q Consensus 431 ~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~--~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~ 508 (639)
....-+-.++|...++..|..++.++.++.+++-. .....-..-..-+++.|++. +.+.+.+||=+|.=.-
T Consensus 79 -~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEaT----- 151 (253)
T PF13277_consen 79 -EPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEAT----- 151 (253)
T ss_dssp --SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S-H-----
T ss_pred -CCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCcH-----
Confidence 00011112345445567899999999888888753 21111112344455555554 3567889998885321
Q ss_pred CCchhHHHHHHHHHHHHhCCCeEEEeCcccc
Q 006591 509 FLSVDKFFVKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 509 ~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
. .+.-.-.+-+-+|.+|+.-|+|.
T Consensus 152 ------S-EK~A~g~~lDGrvsaV~GTHTHV 175 (253)
T PF13277_consen 152 ------S-EKQAMGWYLDGRVSAVVGTHTHV 175 (253)
T ss_dssp ------H-HHHHHHHHHBTTBSEEEEESSSS
T ss_pred ------H-HHHHHHHHhCCcEEEEEeCCCCc
Confidence 1 12223345567899999999997
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.075 Score=55.33 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=44.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhh--hcCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV--ASRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l--~~~vP~~~ 406 (639)
+++++||+|.. ...+.++.+.+.....+-++++||+++.+....+ .+..+..+ .....++.
T Consensus 29 ~i~vvGDiHG~--------------~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e---~l~~l~~lk~~~p~~v~l 91 (271)
T smart00156 29 PVTVCGDIHGQ--------------FDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIE---VILLLFALKILYPNRVVL 91 (271)
T ss_pred CEEEEEeCcCC--------------HHHHHHHHHHcCCCCCceEEEeCCccCCCCChHH---HHHHHHHHHhcCCCCEEE
Confidence 68999999943 4556666666555667889999999965433221 12222111 12335789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 92 lrGNHE~~ 99 (271)
T smart00156 92 LRGNHESR 99 (271)
T ss_pred EeccccHH
Confidence 99999974
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.28 Score=40.25 Aligned_cols=69 Identities=28% Similarity=0.418 Sum_probs=41.8
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC-----CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK-----EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~-----~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
+|..+++... ..+++.|+|..... ..-.|+|........ ...... + +-.+.+
T Consensus 2 ~P~~l~v~~~--~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~----------~---------~~~~~~ 58 (85)
T PF00041_consen 2 APENLSVSNI--SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD--WQEVTV----------P---------GNETSY 58 (85)
T ss_dssp SSEEEEEEEE--CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE--EEEEEE----------E---------TTSSEE
T ss_pred cCcCeEEEEC--CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee--eeeeee----------e---------eeeeee
Confidence 3555666654 35899999998741 123777764433221 111110 0 111267
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+++||+|+|+|.++|..
T Consensus 59 ~i~~L~p~t~Y~~~v~a 75 (85)
T PF00041_consen 59 TITGLQPGTTYEFRVRA 75 (85)
T ss_dssp EEESCCTTSEEEEEEEE
T ss_pred eeccCCCCCEEEEEEEE
Confidence 89999999999999975
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.43 Score=48.94 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=43.5
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccccee
Q 006591 475 QYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERT 543 (639)
Q Consensus 475 Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt 543 (639)
+.+.+.+++++++ ++..++||+.|--.-... .+ .+. ..++...+-+.++|+|+.+|.|..+-.
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~--~p--~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN--YP--TPE-QRELARALIDAGADIIIGHHPHVIQPV 231 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC--CC--CHH-HHHHHHHHHHcCCCEEEeCCCCcccce
Confidence 4578888888875 678899999997542111 11 123 344555556689999999999997754
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.12 Score=54.75 Aligned_cols=69 Identities=13% Similarity=0.091 Sum_probs=43.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
+++++||+|.. ...+.++.+.......+-++++||+++.+.... +.+..+..+. ...-++.
T Consensus 44 ~i~ViGDIHG~--------------~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~---Evi~lL~~lki~~p~~v~l 106 (305)
T cd07416 44 PVTVCGDIHGQ--------------FYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSI---ECVLYLWALKILYPKTLFL 106 (305)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHhcCCCCCceEEEECCccCCCCChH---HHHHHHHHHHhhcCCCEEE
Confidence 68999999943 445666666554455688999999996543322 1222222221 1235789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 107 LRGNHE~~ 114 (305)
T cd07416 107 LRGNHECR 114 (305)
T ss_pred EeCCCcHH
Confidence 99999974
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.13 Score=54.04 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
.++++||+|.. ...+.++.+.......+-++++||+++.+....+ .+..+..+. ....++.
T Consensus 43 ~i~vvGDIHG~--------------~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~e---vl~ll~~lk~~~p~~v~l 105 (285)
T cd07415 43 PVTVCGDIHGQ--------------FYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVE---TFLLLLALKVRYPDRITL 105 (285)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHH---HHHHHHHHhhcCCCcEEE
Confidence 48899999942 4456666665544456789999999965433221 122222221 2345899
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 106 lrGNHE~~ 113 (285)
T cd07415 106 LRGNHESR 113 (285)
T ss_pred EecccchH
Confidence 99999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.12 Score=55.08 Aligned_cols=69 Identities=16% Similarity=0.064 Sum_probs=41.9
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYM 405 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 405 (639)
+++++||+|. ....+.++.+...-. .-+.++++||+++.+....+ .+..+-.+. ..-.++
T Consensus 52 ~~~vvGDiHG--------------~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~E---vl~ll~~lk~~~p~~v~ 114 (321)
T cd07420 52 QVTICGDLHG--------------KLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIE---ILIILFAFFLVYPNEVH 114 (321)
T ss_pred CeEEEEeCCC--------------CHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHH---HHHHHHHHhhcCCCcEE
Confidence 7899999994 345566666554222 23679999999975433221 112121111 123488
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 115 llRGNHE~~ 123 (321)
T cd07420 115 LNRGNHEDH 123 (321)
T ss_pred EecCchhhh
Confidence 899999974
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.19 E-value=1 Score=46.28 Aligned_cols=69 Identities=20% Similarity=0.283 Sum_probs=44.8
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+-.||+.++|.|.-..+ +. + -..-|+++|+||... .|...+-..|.+.+..+--.. =+
T Consensus 60 ~~~r~VcisdtH~~~~~-----------------i~-~--~p~gDvlihagdfT~-~g~~~ev~~fn~~~gslph~y-KI 117 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-----------------IN-D--IPDGDVLIHAGDFTN-LGLPEEVIKFNEWLGSLPHEY-KI 117 (305)
T ss_pred CceEEEEecCcccccCc-----------------cc-c--CCCCceEEeccCCcc-ccCHHHHHhhhHHhccCccee-eE
Confidence 56899999999954321 11 1 256789999999994 455555455666554432111 26
Q ss_pred EecCCCCcCCC
Q 006591 406 TAIGNHERDYV 416 (639)
Q Consensus 406 ~v~GNHD~~~~ 416 (639)
++.||||...+
T Consensus 118 VIaGNHELtFd 128 (305)
T KOG3947|consen 118 VIAGNHELTFD 128 (305)
T ss_pred EEeeccceeec
Confidence 78999998644
|
|
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.90 E-value=0.15 Score=53.57 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=43.2
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
.++++||+|. ....+.++.+.......+-++++||+++.+....+-=.+.-.++ +.....++.+.
T Consensus 51 ~i~viGDIHG--------------~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk-~~~p~~i~llr 115 (293)
T cd07414 51 PLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK-IKYPENFFLLR 115 (293)
T ss_pred ceEEEEecCC--------------CHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhh-hhCCCcEEEEe
Confidence 5899999994 24556666666544556789999999965433222111111111 11123478899
Q ss_pred CCCCcC
Q 006591 409 GNHERD 414 (639)
Q Consensus 409 GNHD~~ 414 (639)
||||..
T Consensus 116 GNHE~~ 121 (293)
T cd07414 116 GNHECA 121 (293)
T ss_pred cccchh
Confidence 999974
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.16 Score=55.11 Aligned_cols=70 Identities=14% Similarity=0.063 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~ 404 (639)
-++.++||+|.. ...+.++.+.+.-... +.++++||+++.+.... +.+..+..+. ...-+
T Consensus 66 ~~i~VvGDIHG~--------------~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~Sl---Evl~lL~~lki~~p~~v 128 (377)
T cd07418 66 CEVVVVGDVHGQ--------------LHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGL---ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CCEEEEEecCCC--------------HHHHHHHHHHhCCCCCCceEEEeccccCCCCChH---HHHHHHHHHhhccCCeE
Confidence 468999999953 4556666665432223 45999999996543322 1122222221 23357
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8999999975
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.14 Score=53.92 Aligned_cols=68 Identities=13% Similarity=0.069 Sum_probs=42.0
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhh--hhcCCceEEe
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITP--VASRVSYMTA 407 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~--l~~~vP~~~v 407 (639)
+.++||+|.. ...+.++.+.+.....+-++++||+++.+.... +....+-. +.....++.+
T Consensus 54 ~~ViGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~ll 116 (294)
T PTZ00244 54 VRVCGDTHGQ--------------YYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSV---ETITLQFCYKIVYPENFFLL 116 (294)
T ss_pred ceeeccCCCC--------------HHHHHHHHHHcCCCCcccEEEeeeEecCCCCHH---HHHHHHHHHhhccCCeEEEE
Confidence 7889999943 455666666654445557889999996543222 11111111 1124468999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||..
T Consensus 117 rGNHE~~ 123 (294)
T PTZ00244 117 RGNHECA 123 (294)
T ss_pred ecccchH
Confidence 9999974
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.7 Score=43.09 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=55.1
Q ss_pred HHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccc
Q 006591 518 KSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSL 597 (639)
Q Consensus 518 ~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~ 597 (639)
+.|.-|-++.+||+.++||+|..+-... +|-.+|--|++-...... .
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye~-------------------------eg~ffvnPGSaTGAfn~~--------~ 143 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYEH-------------------------EGKFFVNPGSATGAFNVS--------D 143 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEEe-------------------------CCcEEeCCCcccCCCccc--------c
Confidence 4566677788999999999999775421 233556566653321110 0
Q ss_pred eecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEe
Q 006591 598 SRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIR 635 (639)
Q Consensus 598 ~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k 635 (639)
.......|+.+.+.++.+....+..-+|+| +|.....|
T Consensus 144 t~~~~PSFvLmDiqg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 144 TDIIVPSFVLMDIQGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred cCCCCCceEEEEecCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 001245799999998888877777778886 56665554
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.69 Score=53.83 Aligned_cols=81 Identities=25% Similarity=0.465 Sum_probs=51.8
Q ss_pred EEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCC
Q 006591 220 HLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGL 294 (639)
Q Consensus 220 ~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL 294 (639)
++-......++++|.|.-.+... -.|+|-+++.... +|..-. + -..+++++||
T Consensus 448 ~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~----~~~~~~-------t-----------~~~~~ti~gL 505 (996)
T KOG0196|consen 448 VLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDER----SYSTLK-------T-----------KTTTATITGL 505 (996)
T ss_pred eEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccccc----ceeEEe-------c-----------ccceEEeecc
Confidence 33344445689999999665533 3666765443211 121110 1 1237899999
Q ss_pred CCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 295 QPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 295 ~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
+|||.|.+||..-. ...|....|+|.|.
T Consensus 506 ~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 506 KPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred CCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 99999999997532 24788899999875
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.26 Score=52.05 Aligned_cols=69 Identities=17% Similarity=0.073 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
.++++||+|.. ...+.++.+.+.....+-++++||+++.+.... +.+..+-.+. ...-++.
T Consensus 44 ~i~vvGDIHG~--------------~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~---evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 44 PVNVCGDIHGQ--------------FYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV---ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred CEEEEEeCCCC--------------HHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH---HHHHHHHHhhhcCCCcEEE
Confidence 48899999943 455666666554445677999999996543322 1122221111 1234789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.23 Score=52.79 Aligned_cols=69 Identities=12% Similarity=0.044 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~~ 406 (639)
.++++||+|.. ...+.++.+.......+-++++||+++.+.... +.+..+..+. ....++.
T Consensus 60 ~i~vvGDIHG~--------------~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~---evl~ll~~lki~~p~~v~l 122 (320)
T PTZ00480 60 PLKICGDVHGQ--------------YFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSL---ETICLLLAYKIKYPENFFL 122 (320)
T ss_pred CeEEEeecccC--------------HHHHHHHHHhcCCCCcceEEEeceecCCCCCcH---HHHHHHHHhcccCCCceEE
Confidence 58999999942 345556666544445567889999996543221 1112221211 1235789
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 123 lRGNHE~~ 130 (320)
T PTZ00480 123 LRGNHECA 130 (320)
T ss_pred Eecccchh
Confidence 99999974
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.41 Score=53.93 Aligned_cols=55 Identities=25% Similarity=0.348 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-C-CCeE-EEeCcccc
Q 006591 473 SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-N-KVDL-VLFGHVHN 539 (639)
Q Consensus 473 ~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y-~Vdl-vlsGH~H~ 539 (639)
-.|.+|-.+.++. ....-+|+++|.|.-... + ++.+...+++ + ++++ ||-||.|.
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~--------e-~~~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD--------E-WKSLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch--------h-hhhHHHHHhhhCCCCceEEECchhhh
Confidence 4567787777775 456668899998863221 1 2223333444 3 7788 99999998
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.03 E-value=0.4 Score=50.98 Aligned_cols=70 Identities=19% Similarity=0.198 Sum_probs=41.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhh--hcCCce
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPV--ASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l--~~~vP~ 404 (639)
-++.++||+|. ....+.++.+...- ..-|-++++||+++.+....+ .+..+-.+ ....-+
T Consensus 60 ~~~~VvGDIHG--------------~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~E---vl~ll~~lki~~p~~v 122 (316)
T cd07417 60 EKITVCGDTHG--------------QFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVE---VILTLFAFKLLYPNHF 122 (316)
T ss_pred ceeEEeecccC--------------CHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHH---HHHHHHHhhhccCCce
Confidence 47999999994 24455666654422 123579999999965433221 11111111 123347
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 123 ~lLRGNHE~~ 132 (316)
T cd07417 123 HLNRGNHETD 132 (316)
T ss_pred EEEeeccchH
Confidence 8899999973
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.64 E-value=0.57 Score=49.78 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCeEEEeCcc
Q 006591 517 VKSVEPLLLKNKVDLVLFGHV 537 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~ 537 (639)
.+.+...++++++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 567889999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=90.48 E-value=0.4 Score=47.53 Aligned_cols=76 Identities=8% Similarity=0.074 Sum_probs=46.2
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-cCCCcEEEEcCCccccCCcHH---------HH-H----HHHHh
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-NGNVDSVFHIGDISYATGFLV---------EW-D----FFLHQ 394 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-~~~pDfVl~~GDl~y~~g~~~---------~w-d----~f~~~ 394 (639)
|++++|.+.+... ...+.++.+++.+. +.+|+.++++|++++...... .. . .+.+.
T Consensus 1 Iv~~Sg~~~~~~~---------~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (209)
T PF04042_consen 1 IVFASGPFLDSDN---------LSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSF 71 (209)
T ss_dssp EEEEES--CTTT----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHH
T ss_pred CEEEecCccCCCH---------hHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHH
Confidence 5788888876321 23566777777666 788999999999997543211 11 1 12233
Q ss_pred hhhhhcCCceEEecCCCCcC
Q 006591 395 ITPVASRVSYMTAIGNHERD 414 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~ 414 (639)
++.+...++++.++|+||..
T Consensus 72 ~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 72 LESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HCCCHCCSEEEEE--TTCTT
T ss_pred HhhcccccEEEEeCCCcccc
Confidence 44455688999999999974
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 639 | ||||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 4e-24 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 4e-24 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-23 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 3e-23 | ||
| 1ute_A | 313 | Pig Purple Acid Phosphatase Complexed With Phosphat | 3e-04 |
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|1UTE|A Chain A, Pig Purple Acid Phosphatase Complexed With Phosphate Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 639 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 7e-99 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 4e-97 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 8e-46 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 4e-32 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 2e-09 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-07 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 4e-06 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 2e-05 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 308 bits (789), Expect = 7e-99
Identities = 99/442 (22%), Positives = 166/442 (37%), Gaps = 54/442 (12%)
Query: 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQTSEVSTFTQENMCSS 269
P H++ D G +M ++WV+ D+ V Y + +
Sbjct: 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMS------ 67
Query: 270 ALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSDE-M 328
F ++ G+IH + L+ ++ Y G + + + F TPP G D
Sbjct: 68 -----TYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPPQTGLDVPY 120
Query: 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL--- 385
F GD+G++ +T + + ++ +V +GD+SYA +
Sbjct: 121 TFGLIGDLGQSFDSNTTLSHYE-------------LSPKKGQTVLFVGDLSYADRYPNHD 167
Query: 386 -VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP 444
V WD + + ++ GNHE ++ + E P+ + +P
Sbjct: 168 NVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE-------INETEPFKPFSYRYHVPYE 220
Query: 445 SKDRP---WYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRP 501
+ WYSI++AS H V+S+ + + QY W++K+L V RS+TPWLI H P
Sbjct: 221 ASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSP 280
Query: 502 MYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNG 561
+Y+S + + E +K KVD+V GHVH YER+ V
Sbjct: 281 LYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY------KITN 334
Query: 562 IDTYDHSNYTAPVHAIIGMAG---FSLDKFNKNNATWSLSRVAKFGYLRGHA-TKQEIQL 617
+ +APV+ IG AG + +S R A FG+ +
Sbjct: 335 GLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHF 394
Query: 618 EFVNADTRKVE--DSFRIIRRQ 637
+ DS R
Sbjct: 395 SWNRNQDGVAVEADSVWFFNRH 416
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 303 bits (777), Expect = 4e-97
Identities = 106/447 (23%), Positives = 169/447 (37%), Gaps = 63/447 (14%)
Query: 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQ--VEYGDDG----KTQTSEVSTFTQE 264
+ P H++ D G + ++W + + V Y + K V T+
Sbjct: 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYY 79
Query: 265 NMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGG 324
N S +IH + L+ + YR G D + F TPP G
Sbjct: 80 NYTS---------------AFIHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKPG 122
Query: 325 SDE-MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG 383
D F GD+G+ +T + E N+ +V +GD+SY+
Sbjct: 123 PDVPYVFGLIGDIGQTHDSNTTLTHY-------------EQNSAKGQAVLFMGDLSYSNR 169
Query: 384 FLVE----WDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYF 439
+ WD + + ++ GNHE DY + +P+ +
Sbjct: 170 WPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIG-------EYQPFVPFTNRY 222
Query: 440 PMPTP---SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIF 496
P P S D WY+I++AS H V+S+ + S QYKW +L V+RS+TPWLI
Sbjct: 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIV 282
Query: 497 AGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPT 556
H P+Y+S + + EP + KVD+V GHVH+YER+ V
Sbjct: 283 LVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAY----- 337
Query: 557 KDDNGIDTYDHSNYTAPVHAIIGMAGFS---LDKFNKNNATWSLSRVAKFGYLRGHA-TK 612
+ S+ +APV+ IG G S + + ++S R A FG+ +
Sbjct: 338 -NIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNR 396
Query: 613 QEIQLEFVNADTRKV--EDSFRIIRRQ 637
+ DS ++ R
Sbjct: 397 THAHFSWHRNQDGASVEADSLWLLNRY 423
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 164 bits (415), Expect = 8e-46
Identities = 69/335 (20%), Positives = 112/335 (33%), Gaps = 58/335 (17%)
Query: 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF 384
+ ++F+A GD G P + ++ KA++ V D + +GD Y TG
Sbjct: 4 TPILRFVAVGDWGGVPNA----PFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV 59
Query: 385 LVEWD------FFLHQITPVASRVSYMTAIGNHERDYVNSGSV-YSTPDSGGECGIPYET 437
D F P V + GNH+ S + YS PY
Sbjct: 60 HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPY-Y 118
Query: 438 YFPMPTPSKDRPWYSIEQASVHFTVISTEH---------DWWLNSEQYKWIQKDLASVDR 488
P + +V S + + L Q WI+K LA+
Sbjct: 119 RLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA--- 175
Query: 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFR 548
+K +++ AGH P++S VK + PLL +KV L GH HN +
Sbjct: 176 AKEDYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ---- 229
Query: 549 NKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGF------SLDKFNKNNATWS-LSRVA 601
D+NG+ + G F L K + + +
Sbjct: 230 ---------DENGL-----------GFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENS 269
Query: 602 KFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIRR 636
G+ T +E+ + ++ A K ++ RR
Sbjct: 270 LGGFAYVEITPKEMSVTYIEASG-KSLFKTKLPRR 303
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 4e-32
Identities = 46/345 (13%), Positives = 95/345 (27%), Gaps = 73/345 (21%)
Query: 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLV 386
+++F + GD GK + K + N V + G +
Sbjct: 3 QLRFASLGDWGKDTKGQIL----------NAKYFKQFIKNERVTFIVSPGSNFIDGVKGL 52
Query: 387 ---EWDFFLHQI---TPVASRVSYMTAIGNHERDYVNSGSVYSTP----------DSGGE 430
W + + + T +G + + + +
Sbjct: 53 NDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKD 112
Query: 431 CGIPYETYFPMP------------TPSKDRPWYSIEQASVHFTVISTEHDWW------LN 472
+ MP + + + F I T ++
Sbjct: 113 ADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIH 172
Query: 473 SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLV 532
+ + ++ L+ ++I G +P+YSS + + PLL +VDL
Sbjct: 173 EKAWNDLKSQLSVAK-KIADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDAEVDLY 229
Query: 533 LFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNN 592
+ GH +N E H G S K N
Sbjct: 230 ISGHDNNME-------------------------VIEDNDMAHITCGSGSMSQGKSGMKN 264
Query: 593 ATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637
+ SL + G+ + I +FV++ +V + ++ ++
Sbjct: 265 -SKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKK 308
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 2e-09
Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 23/208 (11%)
Query: 353 SLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV-ASRVSYMTAIGNH 411
S + A +V + D + GD++ G + ++T V + GNH
Sbjct: 77 SDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELAKKLTQVEKNGTQVFVVPGNH 135
Query: 412 ERDYVNS-----GSVYSTPDSGGECGIPYETYFPMPTPSKDRP---WYSIEQAS-VHFTV 462
+ + + T + F Y +S V +
Sbjct: 136 DINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195
Query: 463 IST------------EHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL 510
+ T + L + WI++ A ++ + H +
Sbjct: 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQK 255
Query: 511 SVDKFFVKSVEPLLLKNKVDLVLFGHVH 538
+ + V L + +D L GH+H
Sbjct: 256 GYTINYNQQVIDALTEGAMDFSLSGHIH 283
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 52.7 bits (125), Expect = 2e-07
Identities = 39/261 (14%), Positives = 67/261 (25%), Gaps = 54/261 (20%)
Query: 333 YGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FLVEWDFF 391
Y D+ T GS +++ + V V +GDI D
Sbjct: 16 YADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRA 75
Query: 392 LHQITPVASRVS--YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRP 449
L + S GNHE + S+ S+ + + T D
Sbjct: 76 LDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ---RTGTDTGSDLIGDDIY 132
Query: 450 WYSIEQAS-VHFTVIST------------------------------------------- 465
Y A F ++
Sbjct: 133 AYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQ 192
Query: 466 ---EHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEP 522
+ + + +Q +W+ L D + LIF H P++ + + +
Sbjct: 193 RFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIF-SHLPVHPCAADPICLAWNHEAVLSV 251
Query: 523 LLLKNKVDLVLFGHVHNYERT 543
L V + GH H+ R
Sbjct: 252 LRSHQSVLCFIAGHDHDGGRC 272
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 3e-07
Identities = 27/183 (14%), Positives = 56/183 (30%), Gaps = 33/183 (18%)
Query: 365 NNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASR--VSYMTAIGNHERDYVNSGSVY 422
+ D++ GD++ G + + P A++ + +GNH D
Sbjct: 63 SGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH--DDRA----- 114
Query: 423 STPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHF----TVISTEHDWWLNSEQYKW 478
+ PS + T + H + + Q W
Sbjct: 115 -----------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 163
Query: 479 IQKDLASVDRSKTPWLIFAGHRPM---YSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFG 535
+ ++LA + ++ H P+ D+ ++ +L V +L G
Sbjct: 164 LAEELA--TPAPDGTILALHHPPIPSVLDMAVTVELRDQ---AALGRVLRGTDVRAILAG 218
Query: 536 HVH 538
H+H
Sbjct: 219 HLH 221
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 1e-06
Identities = 98/710 (13%), Positives = 188/710 (26%), Gaps = 240/710 (33%)
Query: 44 HRNH--TAISNFRVLNRKYLSDCPFRNPFLNISVSKSSDLSD-EEFVTVTVTGVLHPSRH 100
H +H + + LS F + F+ + D D ++ +L
Sbjct: 3 HHHHMDFETGEHQYQYKDILSV--FEDAFV-----DNFDCKDVQDMPK----SILSKEEI 51
Query: 101 DWVAMISPAHSDVSSCPFNGILYAQTGDLSNLPLLCHYP--VKAQFMSN--DPDY---LS 153
D + ++S +G L L + +F+ +Y +S
Sbjct: 52 DHI-IMSKD-------AVSGTLRL-------FWTLLSKQEEMVQKFVEEVLRINYKFLMS 96
Query: 154 CKKKECKKRRNGKCKFTTCGGSIIFHVINIRTDIEFVFFAGGFATPCILSRTQPVNFANP 213
K E ++ + + D + VF +SR QP
Sbjct: 97 PIKTEQRQPSMMTRMYIEQ-------RDRLYNDNQ-VF------AKYNVSRLQPY----- 137
Query: 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDG--KTQ-TSEVSTFTQENMCSSA 270
L L + V + G G KT +V C S
Sbjct: 138 -LKLRQALLELRPAK------NV--------LIDGVLGSGKTWVALDV--------CLSY 174
Query: 271 LPSPAKDFG--WHNPGYIHT--AVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGSD 326
DF W N ++ V+ LQ + D S I+ R
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI--QA 232
Query: 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLV 386
E++ L ++ Y L V+ V N + F ++S L+
Sbjct: 233 ELRRLL-----------KSKPY--ENCLLVL----LNVQNAKAWNAF---NLSCKI--LL 270
Query: 387 EWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFP--MPTP 444
T +++A + + + ++ +
Sbjct: 271 --------TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV--------KSLLLKYLDCR 314
Query: 445 SKDRPWYSIEQA-SVHFTVIS----TEHDWWLNSEQYKWIQKD-LASVDRSKTPWLIFAG 498
+D P + + + +S + D + +K + D L ++ S L A
Sbjct: 315 PQDLP----REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 499 HRPMYSSLDGF----------LS--------------VDKFFVKSVEPLLLKNKVDLVLF 534
+R M+ L F LS V+K S L+ K + +
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS---LVEKQPKESTIS 427
Query: 535 GH---------------VHN-----YERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPV 574
+H Y + + IP D Y H +
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL--IPPYLDQYF--YSHIGH---- 479
Query: 575 H-AIIGMAG----FS---LD------KFNKNNATWS-----LSRVAKFGYLRGHATKQE- 614
H I F LD K ++ W+ L+ + + + + + +
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539
Query: 615 ----------------------------IQLEFVNADTRKVEDSFRIIRR 636
+++ + D E++ + ++R
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 4e-06
Identities = 28/182 (15%), Positives = 52/182 (28%), Gaps = 30/182 (16%)
Query: 365 NNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYST 424
D+V GDI G E+ + + + + GNH
Sbjct: 38 LRERPDAVVVSGDIV-NCGRPEEYQVARQILGSLNYPLYLI--PGNH------------- 81
Query: 425 PDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHF----TVISTEHDWWLNSEQYKWIQ 480
D + P + +++ + + + WL E W++
Sbjct: 82 -DDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140
Query: 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPL--LLKN--KVDLVLFGH 536
L + P IF H P+ D ++ L L++ + + GH
Sbjct: 141 AQLF--EGGDKPATIFMHHPPLPLGNAQM---DPIACENGHRLLALVERFPSLTRIFCGH 195
Query: 537 VH 538
H
Sbjct: 196 NH 197
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 2e-05
Identities = 20/216 (9%), Positives = 55/216 (25%), Gaps = 38/216 (17%)
Query: 352 GSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW----------------------- 388
++ + + D + +G+I E+
Sbjct: 16 ERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYII 75
Query: 389 ---DFFLHQITPVASRVSYMTAIGNH-ERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP 444
D F +I + + + G + + + Y + + +E +
Sbjct: 76 ETLDKFFREIGELGVKTFVV--PGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGE 133
Query: 445 SKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYS 504
+ + + ++ +++ L V+ K L+ + P
Sbjct: 134 FEVIGFGG-------LLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIG 186
Query: 505 SLDGFLSVDKFFV--KSVEPLLLKNKVDLVLFGHVH 538
D V ++ ++ + GHV
Sbjct: 187 EFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 639 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.97 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.91 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.88 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.88 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.79 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.52 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.48 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.4 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.36 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.33 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.32 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.31 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.23 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.18 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.17 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.15 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.08 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.07 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.99 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 98.95 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.91 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.89 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.86 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.79 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.71 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.47 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.43 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.34 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.29 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.29 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.17 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.09 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 97.84 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.76 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.74 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.68 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.67 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.62 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.6 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.17 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.16 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.08 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.88 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.53 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.5 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.48 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.48 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.47 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 96.4 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.4 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.3 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.19 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.18 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.17 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.14 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.09 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.08 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.07 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.05 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.0 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 95.91 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 95.88 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 95.85 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 95.84 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.79 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 95.76 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.62 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 95.6 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.59 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 95.56 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 95.55 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.55 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.53 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.5 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 95.46 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 95.46 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 95.36 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 95.34 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 95.2 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 95.2 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 95.13 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.07 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 95.04 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 95.01 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 94.95 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.92 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 94.92 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 94.87 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.84 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.81 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 94.78 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 94.64 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 94.63 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 94.53 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 94.47 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 94.47 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 94.46 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 94.45 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 94.41 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 94.38 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.33 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 94.3 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 94.24 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.19 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 94.18 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 94.16 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 94.13 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 94.11 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 94.11 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 94.08 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 94.07 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 94.06 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 93.91 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 93.9 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 93.89 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 93.86 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 93.86 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 93.81 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 93.79 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 93.7 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 93.7 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 93.64 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 93.51 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 93.47 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 93.46 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.43 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 93.39 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 93.29 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.28 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 93.27 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 93.26 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 93.26 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.19 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 93.1 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 93.06 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 92.88 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 92.86 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 92.44 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 92.43 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.12 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 92.07 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 92.04 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 91.99 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 91.89 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 91.62 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 91.56 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 91.47 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 91.41 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 91.4 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 91.34 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 91.32 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.24 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 91.21 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 91.1 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 90.95 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 90.89 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 90.82 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 90.76 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 90.68 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 90.52 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 90.32 | |
| 2lfe_A | 138 | E3 ubiquitin-protein ligase HECW2; structural geno | 90.2 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 90.12 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 89.83 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 89.62 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 89.51 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 88.91 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 88.2 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 88.11 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 87.89 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 87.76 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 87.51 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 86.47 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 86.47 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 86.36 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 85.9 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 84.82 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 83.66 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 83.51 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 82.75 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 82.5 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 82.04 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 81.8 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 81.5 | |
| 4go6_B | 232 | HCF C-terminal chain 1; tandem fibronectin repeat, | 81.45 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 81.22 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 80.04 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-58 Score=504.83 Aligned_cols=383 Identities=26% Similarity=0.427 Sum_probs=301.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeC-CC-CCcEEEEecCCCccc----ceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSG-DK-EPQQVEYGDDGKTQT----SEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~-~~-~~~~V~yg~~g~~~~----~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+++.|.|+||++++++.++|+|+|+|. +. +.+.|+|++.+.... +..++|... -..+++
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 85 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYY---------------NYTSAF 85 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEET---------------TEECCE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEec---------------CCcCCE
Confidence 467899999999998789999999998 54 778999997654221 112222211 123589
Q ss_pred EEEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCC-CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHh
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS-DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEV 364 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~-~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i 364 (639)
+|+|+|+||+|||+|+|||+++ .||+.++|+|+|.+++ .++||+++||+|... ....+++++.+.
T Consensus 86 ~~~v~l~gL~p~t~Y~Yrv~~g--~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~-----------~~~~~l~~i~~~- 151 (426)
T 1xzw_A 86 IHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH-----------DSNTTLTHYEQN- 151 (426)
T ss_dssp EEEEEECCCCTTCEEEEEECCG--GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH-----------HHHHHHHHHHHC-
T ss_pred EEEEEECCCCCCCEEEEEECCC--CccceeEEECCCCCCCCCCeEEEEEEeCCCCC-----------chHHHHHHHHhC-
Confidence 9999999999999999999974 5899999999997543 579999999998631 112334443321
Q ss_pred hcCCCcEEEEcCCccccCCc----HHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccC
Q 006591 365 NNGNVDSVFHIGDISYATGF----LVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFP 440 (639)
Q Consensus 365 ~~~~pDfVl~~GDl~y~~g~----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~ 440 (639)
..+|||||++||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+..... . ...+....|..+|.
T Consensus 152 -~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f~ 223 (426)
T 1xzw_A 152 -SAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRYP 223 (426)
T ss_dssp -TTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHSC
T ss_pred -CCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEEe
Confidence 1489999999999998765 4679999999999988999999999999864210 0 00122356788899
Q ss_pred CCCCC---CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHH
Q 006591 441 MPTPS---KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFV 517 (639)
Q Consensus 441 ~P~~~---~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r 517 (639)
||.++ .++.||+|++|+++||+||++.++..+.+|++||+++|+++++++++|+||++|+|+|+...........++
T Consensus 224 ~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r 303 (426)
T 1xzw_A 224 TPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMR 303 (426)
T ss_dssp CCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHH
T ss_pred CCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHH
Confidence 98642 346899999999999999998877778999999999999987778899999999999986542222335679
Q ss_pred HHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCC-ccccCCCCCCcEEEEeCCCCCCCC---CCCCCCC
Q 006591 518 KSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGI-DTYDHSNYTAPVHAIIGMAGFSLD---KFNKNNA 593 (639)
Q Consensus 518 ~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~-~~y~~~~~~gpv~iv~G~aG~~l~---~~~~~~~ 593 (639)
+.|+++|++++||++|+||+|.|+|++|++++++.. .+|. ..|. ++++|+||++|+||+... .+..++|
T Consensus 304 ~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~-----~~g~~~~~~--~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 304 AIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI-----VNAKCTPVS--DESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp HHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS-----TTCCCCCEE--CTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred HHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc-----cCCcccccc--CCCccEEEEeCCCccccccccccCCCCC
Confidence 999999999999999999999999999999876421 1221 1122 357899999999998532 4545678
Q ss_pred CccceecccccEEEEEE-eCCEEEEEEEECCCCe--EEEEEEEEecCC
Q 006591 594 TWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRK--VEDSFRIIRRQI 638 (639)
Q Consensus 594 ~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~--v~D~f~I~k~~~ 638 (639)
+|++++...+||++|++ ++++|.++|+++.+|+ +.|+|+|.|.++
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~~ 424 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYW 424 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSCC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEeccc
Confidence 99999999999999999 7889999999888998 899999999875
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-57 Score=496.57 Aligned_cols=382 Identities=26% Similarity=0.405 Sum_probs=296.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-CCcEEEEecCCCccc----ceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQT----SEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~~~V~yg~~g~~~~----~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
+++.|.|+||++++++.++|+|+|+|.+. +.+.|+|++.+.... +.+++|... -..++++
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~~~~ 79 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFF---------------NYSSGFI 79 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCS---------------SCBCCEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEec---------------CCCCCEE
Confidence 56789999999998878999999999764 678999997654221 122222211 1245899
Q ss_pred EEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCC-CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS-DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN 365 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~-~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~ 365 (639)
|+|+|+||+|||+|+|||+.+ +||+.++|+|+|.+++ .++||+++||+|... +...++ +.+.
T Consensus 80 ~~v~l~gL~p~t~Y~Yrv~~~--~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~-----------~~~~~l----~~~~ 142 (424)
T 2qfp_A 80 HHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF-----------DSNTTL----SHYE 142 (424)
T ss_dssp EEEEECSCCTTCEEEEEECCS--SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH-----------HHHHHH----HHHH
T ss_pred EEEEECCCCCCCEEEEEECCC--CccceEEEECCCCCCCCCCeEEEEEEeCCCCC-----------ChHHHH----HHHH
Confidence 999999999999999999986 5899999999997643 579999999999642 112223 3333
Q ss_pred c--CCCcEEEEcCCccccCCc----HHHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCcccccccccc
Q 006591 366 N--GNVDSVFHIGDISYATGF----LVEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYF 439 (639)
Q Consensus 366 ~--~~pDfVl~~GDl~y~~g~----~~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f 439 (639)
+ .++||||++||++|+.+. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ........|..+|
T Consensus 143 ~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 215 (424)
T 2qfp_A 143 LSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---I----NETEPFKPFSYRY 215 (424)
T ss_dssp TCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---G----TBCSTTHHHHHHC
T ss_pred hCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---c----cccccchhhhhhc
Confidence 3 389999999999998653 3579999999999888899999999999864210 0 0001134677788
Q ss_pred CCCCCC---CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH
Q 006591 440 PMPTPS---KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF 516 (639)
Q Consensus 440 ~~P~~~---~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~ 516 (639)
.||..+ ..+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+++...........+
T Consensus 216 ~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~ 295 (424)
T 2qfp_A 216 HVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAM 295 (424)
T ss_dssp CCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHH
T ss_pred cCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHH
Confidence 888642 35689999999999999999877666789999999999998777789999999999997653221223457
Q ss_pred HHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCC---CCCCCCC
Q 006591 517 VKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLD---KFNKNNA 593 (639)
Q Consensus 517 r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~---~~~~~~~ 593 (639)
++.|+++|++++||++|+||+|.|+|++|+++.+....+.. . ..| .++++|+||++|+||.... .+..++|
T Consensus 296 r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~---~-~~~--~~~~~~vyi~~G~gg~~~~~~~~~~~~~p 369 (424)
T 2qfp_A 296 RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGL---C-TPV--KDQSAPVYITIGDAGNYGVIDSNMIQPQP 369 (424)
T ss_dssp HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCC---C-SCE--ECTTSCEEEEECCSCTTSCCCCCBCSSCC
T ss_pred HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCc---c-ccc--cCCCCcEEEEecCCCCccccCccCCCCCC
Confidence 88999999999999999999999999999987553221110 0 112 1357899999999998532 3445678
Q ss_pred CccceecccccEEEEEE-eCCEEEEEEEECCCCeE--EEEEEEEecCC
Q 006591 594 TWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRKV--EDSFRIIRRQI 638 (639)
Q Consensus 594 ~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~v--~D~f~I~k~~~ 638 (639)
+|++++...+||++|++ ++++|+++|+++.+|++ .|+|+|.|.++
T Consensus 370 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~ 417 (424)
T 2qfp_A 370 EYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHW 417 (424)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTT
T ss_pred CcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccc
Confidence 99999999999999999 78899999999899997 59999999875
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=321.98 Aligned_cols=361 Identities=17% Similarity=0.214 Sum_probs=226.5
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC----------CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK----------EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~----------~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
.|....++.++...+++ |.|+.-.+ ....|+|............. .|.+...| +.+
T Consensus 7 ~~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~------~g~~~a~~-------~~~ 72 (527)
T 2yeq_A 7 YPFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVR------KGTEMAKP-------SLA 72 (527)
T ss_dssp CSCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEE------EEEEEECG-------GGT
T ss_pred CCccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceE------eeeEEecC-------CCc
Confidence 35556677887766664 88997643 23466665333222211111 00000012 236
Q ss_pred eEEEEEecCCCCCcEEEEEEccCCCccceeeEEECCCCCCC--CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHH
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPPAGGS--DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSD 362 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P~~g~--~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~ 362 (639)
++|+|.|+||+|||+|+|||+.++ .+|+.++|+|+|.+++ .+++|+++||.+... +....++.|
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~~-~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~-----------g~~~~~~~i-- 138 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTGH-ELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH-----------GYYTAYKHM-- 138 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEETT-EECCCEEEECCCCTTCCCCCEEEEEECCCCGGG-----------CCCHHHHHH--
T ss_pred eEEEeecCCcCCCCEEEEEEEeCC-CcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC-----------CccHHHHHH--
Confidence 899999999999999999999865 5899999999998653 479999999988631 112344444
Q ss_pred HhhcCCCcEEEEcCCccccCCcH--------------------HH----HHHHH--HhhhhhhcCCceEEecCCCCcCCC
Q 006591 363 EVNNGNVDSVFHIGDISYATGFL--------------------VE----WDFFL--HQITPVASRVSYMTAIGNHERDYV 416 (639)
Q Consensus 363 ~i~~~~pDfVl~~GDl~y~~g~~--------------------~~----wd~f~--~~l~~l~~~vP~~~v~GNHD~~~~ 416 (639)
.+.++|||||+||++|+++.. .+ |..++ ..++.+.+.+|+|+++||||+..+
T Consensus 139 --a~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn 216 (527)
T 2yeq_A 139 --AKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENN 216 (527)
T ss_dssp --TTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTT
T ss_pred --HhcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCC
Confidence 346899999999999997532 11 22222 246677789999999999999643
Q ss_pred CCCCccCCCCCCCcc----cccccccc-CCCCC-------CCCCCeEEEEeCC-EEEEEEeCCCCC--------------
Q 006591 417 NSGSVYSTPDSGGEC----GIPYETYF-PMPTP-------SKDRPWYSIEQAS-VHFTVISTEHDW-------------- 469 (639)
Q Consensus 417 ~~~~~y~~~dsgge~----~~~y~~~f-~~P~~-------~~~~~~Ysfd~G~-v~fi~LDT~~~~-------------- 469 (639)
..+......+..+.. ..+++.+| .||.. .....||+|++|+ ++||+|||+...
T Consensus 217 ~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~ 296 (527)
T 2yeq_A 217 YANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSD 296 (527)
T ss_dssp CBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCH
T ss_pred CCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccc
Confidence 221110000000000 01233333 23321 2346899999999 999999997532
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCC--------C--chhHHHHHHHHHHHHhCCCe-
Q 006591 470 --------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF--------L--SVDKFFVKSVEPLLLKNKVD- 530 (639)
Q Consensus 470 --------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~--------~--~~~~~~r~~l~~Ll~~y~Vd- 530 (639)
..+.+|++||+++|++ ++++|+||+.|+|++...... . ..-...|+.|+++|.+++|+
T Consensus 297 ~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n 373 (527)
T 2yeq_A 297 ESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNN 373 (527)
T ss_dssp HHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCC
T ss_pred cccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCC
Confidence 1479999999999996 568999999999998754210 0 11245689999999999994
Q ss_pred -EEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCC--C--CCCCCCCCC---CCCCccceeccc
Q 006591 531 -LVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGM--A--GFSLDKFNK---NNATWSLSRVAK 602 (639)
Q Consensus 531 -lvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~--a--G~~l~~~~~---~~~~ws~~~~~~ 602 (639)
++|+||+|.++++....+.. +.++ ...+.-+++++. + |........ ...++..+....
T Consensus 374 ~vvLsGDvH~~~~~~~~~~~~-------~p~~-------~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~ 439 (527)
T 2yeq_A 374 VVVLTGDVHASWASNLHVDFE-------KTSS-------KIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDY 439 (527)
T ss_dssp EEEEECSSSSEEEEEEESSTT-------CTTS-------CEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBC
T ss_pred EEEEEcchHHHhHhhcccccc-------CCCC-------CceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCC
Confidence 99999999999986321100 0000 000122232222 1 111100000 011222333468
Q ss_pred ccEEEEEEeCCEEEEEEEEC
Q 006591 603 FGYLRGHATKQEIQLEFVNA 622 (639)
Q Consensus 603 ~Gy~~v~v~~~~L~~e~~~~ 622 (639)
.||++|++++++++++|+..
T Consensus 440 ~Gy~~v~vt~~~~~~~~~~v 459 (527)
T 2yeq_A 440 RGYVRCTVTPHQWKADYRVM 459 (527)
T ss_dssp EEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEeccEEEEEEEEe
Confidence 89999999999999999874
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=306.11 Aligned_cols=263 Identities=18% Similarity=0.236 Sum_probs=192.0
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc----HHHHHHHHH-hhhhh--
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF----LVEWDFFLH-QITPV-- 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~----~~~wd~f~~-~l~~l-- 398 (639)
.+++|+++||+|.+. +....+.++|.+.+++.+|||||++||++|. |. ..+|.+.++ .++..
T Consensus 2 ~~l~f~~igD~g~g~----------~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~ 70 (342)
T 3tgh_A 2 CQLRFASLGDWGKDT----------KGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKG 70 (342)
T ss_dssp CCEEEEECCSCBSCC----------HHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGG
T ss_pred ceEEEEEEecCCCCC----------chHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhh
Confidence 469999999999642 1245677888888888999999999999998 53 345654333 33322
Q ss_pred hcCCceEEecCCCCcCCCCCC-Ccc-----CCCC----CCCccccccccccCCCCCCCCCCeEEE----Ee---------
Q 006591 399 ASRVSYMTAIGNHERDYVNSG-SVY-----STPD----SGGECGIPYETYFPMPTPSKDRPWYSI----EQ--------- 455 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~~~~~~~-~~y-----~~~d----sgge~~~~y~~~f~~P~~~~~~~~Ysf----d~--------- 455 (639)
...+|+++++||||+..+... -.| ...+ ...........+|.||. .||+| ..
T Consensus 71 ~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~ 145 (342)
T 3tgh_A 71 DMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKT 145 (342)
T ss_dssp TTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC--------
T ss_pred hhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeecccccccccc
Confidence 357999999999998522100 000 0000 00000112345677874 57865 32
Q ss_pred C----CEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHH
Q 006591 456 A----SVHFTVISTEHDWW----------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVE 521 (639)
Q Consensus 456 G----~v~fi~LDT~~~~~----------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~ 521 (639)
| .++||+|||..... ...+|++||+++|+. ++|+||++|||+|+.+.. .....+++.|+
T Consensus 146 g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~ 218 (342)
T 3tgh_A 146 GHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLL 218 (342)
T ss_dssp -CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTH
T ss_pred CCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHH
Confidence 3 39999999964321 235899999999953 479999999999987642 22356789999
Q ss_pred HHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecc
Q 006591 522 PLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVA 601 (639)
Q Consensus 522 ~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~ 601 (639)
+||++|+|+++|+||+|.|+|.++ .++.||++|++|....... ..++|+.++..
T Consensus 219 ~ll~~~~VdlvlsGH~H~~~~~~~-------------------------~g~~~iv~Ga~g~~~~~~~-~~~~~s~f~~~ 272 (342)
T 3tgh_A 219 PLLKDAEVDLYISGHDNNMEVIED-------------------------NDMAHITCGSGSMSQGKSG-MKNSKSLFFSS 272 (342)
T ss_dssp HHHHHTTCCEEEECSSSSEEEEEE-------------------------TTEEEEEECCSSCCCCCCS-SCCTTEEEEEC
T ss_pred HHHHHcCCCEEEECCCcceeEEee-------------------------CCcEEEEeCccccccccCC-CCCCcceeecC
Confidence 999999999999999999999853 2478999999987654322 34678888888
Q ss_pred cccEEEEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 602 KFGYLRGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 602 ~~Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
.+||.++++++++|+++|+++.+|+++|+|+|.|+.
T Consensus 273 ~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~k~~ 308 (342)
T 3tgh_A 273 DIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKK 308 (342)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTTEEEEEEEEECCC
T ss_pred CCcEEEEEEECCEEEEEEEECCCCcEEEEEEEECCC
Confidence 999999999999999999986799999999999964
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=268.42 Aligned_cols=261 Identities=25% Similarity=0.351 Sum_probs=180.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHH-HHHHHhhhhhh----c
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEW-DFFLHQITPVA----S 400 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~w-d~f~~~l~~l~----~ 400 (639)
++++|+++||+|...... +.......+.+.|.+.+++.+|||||++||++|..+....+ .+|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~----~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAP----FHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTT----SSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCcc----ccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhh
Confidence 579999999999864321 11112234555665556667899999999999875432211 13334443322 2
Q ss_pred -CCceEEecCCCCcCCCCCCCccCCCCCCCcccccc---ccccCCCCCCCCCCeEEEEe------CCEEEEEEeCCCC--
Q 006591 401 -RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPY---ETYFPMPTPSKDRPWYSIEQ------ASVHFTVISTEHD-- 468 (639)
Q Consensus 401 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y---~~~f~~P~~~~~~~~Ysfd~------G~v~fi~LDT~~~-- 468 (639)
.+|+++++||||+..+.. ....| ..+|.+| ..||++++ ++++||+||+...
T Consensus 81 ~~~p~~~v~GNHD~~~~~~------------~~~~~~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~ 143 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGNVS------------AQIAYSKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCG 143 (313)
T ss_dssp TTCCEEECCCHHHHHSCHH------------HHHHGGGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHC
T ss_pred cCCCEEEECCCCccCCCcc------------ccccccccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhC
Confidence 789999999999842110 00011 1234444 35889888 5899999998641
Q ss_pred ---------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEE
Q 006591 469 ---------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVL 533 (639)
Q Consensus 469 ---------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdlvl 533 (639)
...+.+|++||++.|++. +.+|+|+++|+|++..... .....+++.|.++|++++|+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l 218 (313)
T 1ute_A 144 NSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYL 218 (313)
T ss_dssp CGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEE
T ss_pred cCccccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEE
Confidence 113579999999999975 3489999999999876542 22345678999999999999999
Q ss_pred eCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCC---CCCCCccceec----ccccEE
Q 006591 534 FGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFN---KNNATWSLSRV----AKFGYL 606 (639)
Q Consensus 534 sGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~---~~~~~ws~~~~----~~~Gy~ 606 (639)
+||+|.+++..+ ..++.||++|++|....... .....+..+.. ..+||.
T Consensus 219 ~GH~H~~~~~~~------------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~ 274 (313)
T 1ute_A 219 CGHDHNLQYLQD------------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 274 (313)
T ss_dssp ECSSSSEEEEEC------------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEE
T ss_pred ECChhhhhhccC------------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceE
Confidence 999999998742 13568999999886322110 00122333322 237999
Q ss_pred EEEEeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 607 RGHATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 607 ~v~v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
+|++++++++++++.. +|+++|+|+|.|+.
T Consensus 275 ~l~v~~~~~~~~~~~~-~g~~~~~~~l~~~~ 304 (313)
T 1ute_A 275 YVEITPKEMSVTYIEA-SGKSLFKTKLPRRA 304 (313)
T ss_dssp EEEECSSCEEEEEEET-TSCEEEEEEECCCC
T ss_pred EEEEEcCEEEEEEEcC-CCcEEEEEEecccc
Confidence 9999999999999985 99999999999875
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-23 Score=217.68 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=170.5
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhc--
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVAS-- 400 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~-- 400 (639)
...+||++++|+|....... .+........++++++.+.+ .++|+|+++||+++. +...+|+.+.+.++.+..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~--~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l~~~~ 99 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRR--LYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK-GEPAAYRKLRGLVEPFAAQL 99 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCC--BTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcc--cccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHHHHhhc
Confidence 36799999999998654321 11112245677888888776 799999999999964 556677777777777643
Q ss_pred CCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----CCCCHHHH
Q 006591 401 RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----WWLNSEQY 476 (639)
Q Consensus 401 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----~~~g~~Q~ 476 (639)
.+|+++++||||+.. .+...+..........+|++++++++|++||+... .....+|+
T Consensus 100 ~~pv~~v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~ 161 (330)
T 3ib7_A 100 GAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQL 161 (330)
T ss_dssp TCEEEECCCTTSCHH------------------HHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHH
T ss_pred CCCEEEeCCCCCCHH------------------HHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHH
Confidence 789999999999731 12222211111123568999999999999998753 24578999
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCC
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIP 555 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 555 (639)
+||++.|+.... ..+|+++|||++...... .......++.+.+++++++|+++|+||+|..+... .
T Consensus 162 ~wl~~~l~~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--~-------- 228 (330)
T 3ib7_A 162 GWLAEELATPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--F-------- 228 (330)
T ss_dssp HHHHHHTTSCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--E--------
T ss_pred HHHHHHHHhccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--E--------
Confidence 999999997532 237888999987654211 11111225788999999999999999999987532 0
Q ss_pred ccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCe
Q 006591 556 TKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRK 626 (639)
Q Consensus 556 ~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~ 626 (639)
++..+++.|+.+...... .............||..|+++++.+.++++....+.
T Consensus 229 ---------------~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 229 ---------------VGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ---------------TTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEECSSCEEEEEEECSCCC
T ss_pred ---------------CCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEEECCCeEEEEeccCCCC
Confidence 234566677766432211 011112222345789999999999999999854443
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=206.55 Aligned_cols=239 Identities=14% Similarity=0.146 Sum_probs=156.9
Q ss_pred CceEEEEEecCCCCCCCCCCc------cccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc-----HHHHHHHHHh
Q 006591 326 DEMKFLAYGDMGKAPRDASTE------HYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF-----LVEWDFFLHQ 394 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~------~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~-----~~~wd~f~~~ 394 (639)
..+||++++|+|......... .+ .......++++++.+.+.+||+|+++||+++.... ...++.+.+.
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRY-YRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEEC-TTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHH-HHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 579999999999875432100 00 01123566777777767899999999999975321 2334444555
Q ss_pred hhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccC-------------CCCCCCCCCeEEEEe-CCEEE
Q 006591 395 ITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFP-------------MPTPSKDRPWYSIEQ-ASVHF 460 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~-------------~P~~~~~~~~Ysfd~-G~v~f 460 (639)
++.+ .+|+++++||||..... . ..+.+.+. +|. .+..||+|+. ++++|
T Consensus 83 l~~~--~~p~~~v~GNHD~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~~~~~~~~~ 144 (322)
T 2nxf_A 83 LDAC--SVDVHHVWGNHEFYNFS-R-------------PSLLSSRLNSAQRTGTDTGSDLIG--DDIYAYEFSPAPNFRF 144 (322)
T ss_dssp HHTT--CSEEEECCCHHHHHHCC-H-------------HHHHTSTTCCCC------CEECGG--GTCCCEEEEEETTEEE
T ss_pred HHhc--CCcEEEecCCCCcccCC-H-------------HHHhhhhCCcccccccccccccCC--CCceEEEEecCCCEEE
Confidence 4442 68999999999983100 0 01111111 222 1356899998 99999
Q ss_pred EEEeCCCC----------------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeE
Q 006591 461 TVISTEHD----------------------------------------------WWLNSEQYKWIQKDLASVDRSKTPWL 494 (639)
Q Consensus 461 i~LDT~~~----------------------------------------------~~~g~~Q~~WL~~~La~~~r~~~pwv 494 (639)
|+||+... .....+|++||++.|+++.+. ..++
T Consensus 145 i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~ 223 (322)
T 2nxf_A 145 VLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERV 223 (322)
T ss_dssp EECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEE
T ss_pred EEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcE
Confidence 99998641 113489999999999986421 3468
Q ss_pred EEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCc
Q 006591 495 IFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAP 573 (639)
Q Consensus 495 IV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gp 573 (639)
||++|+|++........ ....++.+.+++.++ +|+++|+||+|.+++... . .+.
T Consensus 224 iv~~H~p~~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------------~-----------~g~ 278 (322)
T 2nxf_A 224 LIFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------------S-----------SGA 278 (322)
T ss_dssp EEEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------------T-----------TSC
T ss_pred EEEEccCCCCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------------c-----------CCc
Confidence 99999999876531100 011257889999999 899999999999988631 1 234
Q ss_pred EEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECC
Q 006591 574 VHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNAD 623 (639)
Q Consensus 574 v~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~ 623 (639)
.+++.|+.- .. .....||..++++++.++++.+...
T Consensus 279 ~~i~~~~~~---~~-----------~~~~~~y~~v~~~~~~~~~~~~~~~ 314 (322)
T 2nxf_A 279 QHITLEGVI---ET-----------PPHSHAFATAYLYEDRMVMKGRGRV 314 (322)
T ss_dssp EEEECCCGG---GC-----------CTTSCEEEEEEECSSEEEEEEEETS
T ss_pred eEEEecchh---hC-----------CCCCCcEEEEEEECCeEEEEecccc
Confidence 466655441 10 0134689999999999999988643
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=198.60 Aligned_cols=243 Identities=12% Similarity=0.085 Sum_probs=159.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+||++++|+|....... .+........++++++.+++. ++|+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 mri~~iSD~H~~~~~~~--~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~l--~~p~~ 75 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEK--LYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC-GRPEEYQVARQILGSL--NYPLY 75 (274)
T ss_dssp CEEEEECCCCBCSTTCC--BTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS-CCHHHHHHHHHHHTTC--SSCEE
T ss_pred CEEEEEecCCcCCCCcc--cccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhc--CCCEE
Confidence 58999999998743211 011012345677787777654 68999999999964 4556677777777765 68999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCcccccccc-ccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----CCCCHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYET-YFPMPTPSKDRPWYSIEQASVHFTVISTEHD----WWLNSEQYKWIQ 480 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~-~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----~~~g~~Q~~WL~ 480 (639)
+++||||..... ...+.. ++..+.+ .+..+|+++.++++|++||+... .....+|++||+
T Consensus 76 ~v~GNHD~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~ 140 (274)
T 3d03_A 76 LIPGNHDDKALF--------------LEYLQPLCPQLGSD-ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLE 140 (274)
T ss_dssp EECCTTSCHHHH--------------HHHHGGGSGGGCSC-GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHH
T ss_pred EECCCCCCHHHH--------------HHHhhhhhcCcccC-CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHH
Confidence 999999973110 011111 1111211 02357899999999999998753 245789999999
Q ss_pred HHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccC
Q 006591 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKD 558 (639)
Q Consensus 481 ~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d 558 (639)
+.|++. +..++|+++|+|++...... ........+.+.++++++ +|+++|+||+|.++... +
T Consensus 141 ~~l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--~----------- 204 (274)
T 3d03_A 141 AQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--Y----------- 204 (274)
T ss_dssp HHHHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--E-----------
T ss_pred HHHHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe--E-----------
Confidence 999974 24579999999998754311 111111256788999999 89999999999987642 0
Q ss_pred CCCCccccCCCCCCcEEEEeCC-CCCCCCCCCCCCCCcc-ceecccccEEEEEEeCCEEEEEEEEC
Q 006591 559 DNGIDTYDHSNYTAPVHAIIGM-AGFSLDKFNKNNATWS-LSRVAKFGYLRGHATKQEIQLEFVNA 622 (639)
Q Consensus 559 ~~G~~~y~~~~~~gpv~iv~G~-aG~~l~~~~~~~~~ws-~~~~~~~Gy~~v~v~~~~L~~e~~~~ 622 (639)
.+..+++.++ ++... .. .+.+. .......||..+++++++++++++..
T Consensus 205 ------------~g~~~~~~pg~~~~~~--~~--~~~~~~~~~~~~~gy~i~~i~~~~~~~~~~~~ 254 (274)
T 3d03_A 205 ------------RQALISTLPGTVHQVP--YC--HADTDPYYDLSPASCLMHRQVGEQWVSYQHSL 254 (274)
T ss_dssp ------------TTEEEEECCCSSCBCC--CC--SSCCSCEEBCCCCEEEEEEEETTEEEEEEEEC
T ss_pred ------------CCEEEEEcCCcceeec--cC--CCccccccccCCCceEEEEEeCCcEEEEEEec
Confidence 1222444433 33321 11 11221 23344679999999999999999875
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-18 Score=187.78 Aligned_cols=216 Identities=14% Similarity=0.165 Sum_probs=135.5
Q ss_pred CCceEEEEEecCCCCCCCCC--Cccc----------cCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHH
Q 006591 325 SDEMKFLAYGDMGKAPRDAS--TEHY----------IQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFL 392 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~--~~~~----------~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~ 392 (639)
...+||++++|+|.+..... ...+ ........++++++.+++.+||+|+++||+++. +...+++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 36799999999998642100 0000 000125667788887777889999999999965 4445667676
Q ss_pred Hhhhhhh-cCCceEEecCCCCcCCCCCCCccCCCC---CCCccccccccccCCCCC------C-CCCCeEEEEeCCEEEE
Q 006591 393 HQITPVA-SRVSYMTAIGNHERDYVNSGSVYSTPD---SGGECGIPYETYFPMPTP------S-KDRPWYSIEQASVHFT 461 (639)
Q Consensus 393 ~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~y~~~d---sgge~~~~y~~~f~~P~~------~-~~~~~Ysfd~G~v~fi 461 (639)
+.++.+. ..+|+++++||||+..... ..+.... ........|.+.|..... . ....|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWA-RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTC-EEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccc-cccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 6666654 3789999999999853211 0000000 000001123333331110 0 0123444558899999
Q ss_pred EEeCCCC------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhCC
Q 006591 462 VISTEHD------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKNK 528 (639)
Q Consensus 462 ~LDT~~~------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y~ 528 (639)
+||+... .....+|++||++.|+.+.+. ...+|+++|+|++...... .......++.+.+++++++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~ 273 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGA 273 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTT
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcC
Confidence 9998742 235689999999999876432 3458999999997654211 1111123578889999999
Q ss_pred CeEEEeCccccccee
Q 006591 529 VDLVLFGHVHNYERT 543 (639)
Q Consensus 529 VdlvlsGH~H~YeRt 543 (639)
|+++|+||+|.....
T Consensus 274 v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 274 MDFSLSGHIHTQNIR 288 (443)
T ss_dssp CCEEEECSSCSCEEE
T ss_pred CeEEEECCcccCchh
Confidence 999999999997754
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.52 E-value=9.1e-14 Score=137.17 Aligned_cols=170 Identities=12% Similarity=-0.002 Sum_probs=103.9
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+||+++||+|.. ...++++++.+.+.++|+|+++||+++......++..+++.++.+ ..|+++
T Consensus 5 ~mri~~iSD~H~~--------------~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~ 68 (228)
T 1uf3_A 5 VRYILATSNPMGD--------------LEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CCEEEEEECCTTC--------------HHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred eEEEEEEeeccCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEE
Confidence 5899999999964 234566666665568999999999996543455555666666543 679999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCcccccccccc----CCCCCC-CCCCeEEEEeC-CEEEEEEeCCC--CCCCC------
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYF----PMPTPS-KDRPWYSIEQA-SVHFTVISTEH--DWWLN------ 472 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f----~~P~~~-~~~~~Ysfd~G-~v~fi~LDT~~--~~~~g------ 472 (639)
++||||.... ..+...+ ..|... ..+ ..+.++ +++|+.++... .+...
T Consensus 69 v~GNHD~~~~----------------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 130 (228)
T 1uf3_A 69 VPGPQDAPIW----------------EYLREAANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALR 130 (228)
T ss_dssp ECCTTSCSHH----------------HHHHHHHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCE
T ss_pred ECCCCCchhH----------------HHHHhhhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhccc
Confidence 9999997310 0011110 001000 001 134556 88899887421 11112
Q ss_pred --HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccc
Q 006591 473 --SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVH 538 (639)
Q Consensus 473 --~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H 538 (639)
..+.+|+++.|++.. ..+.|++.|+|++.......+ .+.+.+++++++++++++||+|
T Consensus 131 ~~~~~~~~~~~~l~~~~---~~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 131 YPAWVAEYRLKALWELK---DYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp EEHHHHHHHHGGGGGSC---SCCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSS
T ss_pred chhhhHHHHHHHHHhCC---CCCeEEEEccCcccCCccccC-----HHHHHHHHHHhCCCEEEEcccc
Confidence 223344555565532 235899999999764211111 2356677888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=139.23 Aligned_cols=184 Identities=11% Similarity=0.082 Sum_probs=98.6
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHH------------------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVE------------------ 387 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~------------------ 387 (639)
..+||+++||+|... ..++++++.++..++|+|+++||+++.......
T Consensus 4 ~~mri~~iSDlH~~~--------------~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~ 69 (260)
T 2yvt_A 4 MPRKVLAIKNFKERF--------------DLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHE 69 (260)
T ss_dssp CCCEEEEEECCTTCG--------------GGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHH
T ss_pred ceEEEEEEeecCCCh--------------HHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhH
Confidence 358999999999752 124556666655689999999999964321100
Q ss_pred -----HHHHHHhhhhhhc-CCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEE
Q 006591 388 -----WDFFLHQITPVAS-RVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFT 461 (639)
Q Consensus 388 -----wd~f~~~l~~l~~-~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi 461 (639)
.+.+.+.++.+.. ..|+++++||||..... + ....+...-..|....-.....+++++++|+
T Consensus 70 ~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~----~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~ 137 (260)
T 2yvt_A 70 NEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKI----F--------LRAAYEAETAYPNIRVLHEGFAGWRGEFEVI 137 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHH----H--------HHHHHHTTTTCTTEEECSSEEEEETTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhh----h--------HHHHhhhccCCcceEEecCcceEEECCEEEE
Confidence 0223333333332 58999999999974100 0 0000000000000000001123778899999
Q ss_pred EEeCCCCC-CCCHHHHH----HHH----HHHhhccCCCCCeEEEEeccCCccCCC-CC-CchhHHHHHHHHHHHHhCCCe
Q 006591 462 VISTEHDW-WLNSEQYK----WIQ----KDLASVDRSKTPWLIFAGHRPMYSSLD-GF-LSVDKFFVKSVEPLLLKNKVD 530 (639)
Q Consensus 462 ~LDT~~~~-~~g~~Q~~----WL~----~~La~~~r~~~pwvIV~~H~P~y~~~~-~~-~~~~~~~r~~l~~Ll~~y~Vd 530 (639)
.++..... ....+|+. |+. +.|++. .....|++.|+|++.... .. ........+.+.+++++++++
T Consensus 138 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~ 214 (260)
T 2yvt_A 138 GFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPE 214 (260)
T ss_dssp EECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCS
T ss_pred ecCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCC
Confidence 99743210 11112221 333 334432 123469999999875311 00 000000124566778888999
Q ss_pred EEEeCccc
Q 006591 531 LVLFGHVH 538 (639)
Q Consensus 531 lvlsGH~H 538 (639)
++++||+|
T Consensus 215 ~vl~GH~H 222 (260)
T 2yvt_A 215 VAIVGHVG 222 (260)
T ss_dssp EEEECSSC
T ss_pred EEEECCcc
Confidence 99999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.3e-13 Score=141.02 Aligned_cols=254 Identities=13% Similarity=0.087 Sum_probs=132.8
Q ss_pred CceEEEEEecCCCCC----CCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCC-ccccCCc-HHHHHHHHHhhhhhh
Q 006591 326 DEMKFLAYGDMGKAP----RDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGD-ISYATGF-LVEWDFFLHQITPVA 399 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~----~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GD-l~y~~g~-~~~wd~f~~~l~~l~ 399 (639)
..+||++++|+|.+. .-.... ........++++++.+++.++|+|+++|| +++.... ....+.+.+.++.+.
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~--r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVD--RREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEE--CHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcC--hhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 579999999999762 110000 00112467888888888889999999999 6643322 222345556666554
Q ss_pred cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccc----cCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC------
Q 006591 400 SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETY----FPMPTPSKDRPWYSIEQASVHFTVISTEHDW------ 469 (639)
Q Consensus 400 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~----f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~------ 469 (639)
..+|+++++||||... . .. ...+... +.+..+......+.++.+++.|+.++.....
T Consensus 95 ~~~pv~~i~GNHD~~~-~--~~----------~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~ 161 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L--KL----------FGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKN 161 (336)
T ss_dssp HHSCEEECCC-------C--HH----------HHHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CC
T ss_pred hcCCEEEECCCCCccc-c--cc----------HHHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHh
Confidence 3389999999999742 0 00 0011000 1000000000001122356888888643221
Q ss_pred -CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHH-HHHHHHHHHhCCCeEEEeCcccccceeeccc
Q 006591 470 -WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFF-VKSVEPLLLKNKVDLVLFGHVHNYERTCSVF 547 (639)
Q Consensus 470 -~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~-r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~ 547 (639)
....+|++|+.+.|...-+....+.|+++|.|++..... ... ..+ ...+...+.+.++|++++||.|..+...
T Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~-~~~-~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~--- 236 (336)
T 2q8u_A 162 EGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY-AGI-EQGREIIINRALIPSVVDYAALGHIHSFREIQ--- 236 (336)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCEEEE---
T ss_pred hHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC-CCc-cchhhcccCHHHccccCCEEEEccccCceEeC---
Confidence 112467889988886421023457999999998643210 000 000 0001112345689999999999987641
Q ss_pred CCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCC-EEEEEEEECCCCe
Q 006591 548 RNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQ-EIQLEFVNADTRK 626 (639)
Q Consensus 548 ~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~-~L~~e~~~~~dG~ 626 (639)
. .+..+..|+... .+++. .....||..++++++ .+.++++.... +
T Consensus 237 ~-----------------------~~~i~y~GS~~~---------~s~~e-~~~~~~~~lv~i~~~~~~~v~~i~~~~-r 282 (336)
T 2q8u_A 237 K-----------------------QPLTIYPGSLIR---------IDFGE-EADEKGAVFVELKRGEPPRYERIDASP-L 282 (336)
T ss_dssp E-----------------------TTEEEECCCSSC---------CSGGG-TTCCCEEEEEEEETTSCCEEEEEECCC-C
T ss_pred C-----------------------CccEEECCCCcC---------CCccc-cCCCCEEEEEEEeCCCccEEEEEECCC-E
Confidence 0 011222343211 01111 012468999999865 58899988644 6
Q ss_pred EEEEEEE
Q 006591 627 VEDSFRI 633 (639)
Q Consensus 627 v~D~f~I 633 (639)
.+-.+.+
T Consensus 283 ~~~~~~~ 289 (336)
T 2q8u_A 283 PLKTLYY 289 (336)
T ss_dssp CEEEEEE
T ss_pred EEEEeec
Confidence 5655554
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.36 E-value=5.1e-11 Score=115.66 Aligned_cols=181 Identities=13% Similarity=0.113 Sum_probs=111.9
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+|++++||+|...... ...+.+.+.+++.++|+|+++||++. ...++.++.+ ..|++.
T Consensus 10 mm~i~~iSD~H~~~~~~-----------~~~~~l~~~~~~~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~ 68 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCN-----------SLPAKFKKLLVPGKIQHILCTGNLCT--------KESYDYLKTL--AGDVHI 68 (192)
T ss_dssp -CEEEEECCCCBTTTCS-----------SCCHHHHTTCCTTSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEE
T ss_pred ceEEEEEecCCCCccch-----------hHHHHHHHHhccCCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEE
Confidence 47999999999753211 01123333344567999999999984 2233444443 358999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||... .+|. ...++.
T Consensus 69 v~GNhD~~~------------------------~lp~------~~~~~~------------------------------- 87 (192)
T 1z2w_A 69 VRGDFDENL------------------------NYPE------QKVVTV------------------------------- 87 (192)
T ss_dssp CCCTTCCCT------------------------TSCS------EEEEEE-------------------------------
T ss_pred EcCCcCccc------------------------cCCc------ceEEEE-------------------------------
Confidence 999999731 1121 111111
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
..+.|++.|.+++.... . .+.+..++++.++|++++||+|......
T Consensus 88 ----~~~~i~l~Hg~~~~~~~---~-----~~~l~~~~~~~~~d~vi~GHtH~~~~~~---------------------- 133 (192)
T 1z2w_A 88 ----GQFKIGLIHGHQVIPWG---D-----MASLALLQRQFDVDILISGHTHKFEAFE---------------------- 133 (192)
T ss_dssp ----TTEEEEEECSCCCCBTT---C-----HHHHHHHHHHHSSSEEECCSSCCCEEEE----------------------
T ss_pred ----CCEEEEEECCCcCCCCC---C-----HHHHHHHHHhcCCCEEEECCcCcCccEe----------------------
Confidence 12568888865543221 1 2456667777899999999999854321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEe
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIR 635 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k 635 (639)
.+++.++..|+.+...... ......+|..++++++.++++++....+++ +.++++.|
T Consensus 134 ---~~~~~~inpGS~~~~~~~~---------~~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 134 ---HENKFYINPGSATGAYNAL---------ETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp ---ETTEEEEECCCTTCCCCSS---------CSCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ---ECCEEEEECCcccccCCCC---------CcCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 0235677778776532110 012346899999999999999998766664 66666665
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.33 E-value=4.4e-11 Score=114.43 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=111.2
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+|++++||+|.. ...++++++.+.+ ++|+|+++||+.+. .++.+.. |++.
T Consensus 6 ~m~i~~isD~H~~--------------~~~~~~~~~~~~~-~~d~i~~~GD~~~~------------~l~~l~~--~~~~ 56 (176)
T 3ck2_A 6 KQTIIVMSDSHGD--------------SLIVEEVRDRYVG-KVDAVFHNGDSELR------------PDSPLWE--GIRV 56 (176)
T ss_dssp CEEEEEECCCTTC--------------HHHHHHHHHHHTT-TSSEEEECSCCCSC------------TTCGGGT--TEEE
T ss_pred CcEEEEEecCCCC--------------HHHHHHHHHHhhc-CCCEEEECCCCchH------------HHHhhhC--CeEE
Confidence 4899999999932 3456777777755 89999999998431 2333332 8999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
+.||||... ..|. ...++.
T Consensus 57 v~GNhD~~~------------------------~~p~------~~~~~~------------------------------- 75 (176)
T 3ck2_A 57 VKGNMDFYA------------------------GYPE------RLVTEL------------------------------- 75 (176)
T ss_dssp CCCTTCCST------------------------TCCS------EEEEEE-------------------------------
T ss_pred ecCcccchh------------------------cCCc------EEEEEE-------------------------------
Confidence 999999631 0121 000100
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
..+.|++.|.|++.... . .+.+.+++++++++++++||+|......
T Consensus 76 ----~~~~i~~~Hg~~~~~~~---~-----~~~l~~~~~~~~~d~vi~GHtH~~~~~~---------------------- 121 (176)
T 3ck2_A 76 ----GSTKIIQTHGHLFDINF---N-----FQKLDYWAQEEEAAICLYGHLHVPSAWL---------------------- 121 (176)
T ss_dssp ----TTEEEEEECSGGGTTTT---C-----SHHHHHHHHHTTCSEEECCSSCCEEEEE----------------------
T ss_pred ----CCeEEEEECCCccCCCC---C-----HHHHHHHHHhcCCCEEEECCcCCCCcEE----------------------
Confidence 12468889998864321 1 2456677788999999999999865321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeEEEEEEE
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVEDSFRI 633 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v~D~f~I 633 (639)
.+++.++..|+.|.+... ....+|..++++++.+++++++. +|+++.+++.
T Consensus 122 ---~~~~~~inpGs~~~~~~~------------~~~~~y~il~~~~~~~~v~~~~~-~~~~~~~~~~ 172 (176)
T 3ck2_A 122 ---EGKILFLNPGSISQPRGT------------IRECLYARVEIDDSYFKVDFLTR-DHEVYPGLSK 172 (176)
T ss_dssp ---ETTEEEEEECCSSSCCTT------------CCSCCEEEEEECSSEEEEEEECT-TSCBCTTCCE
T ss_pred ---ECCEEEEECCCCCcCCCC------------CCCCeEEEEEEcCCEEEEEEEEE-CCEEcchhhc
Confidence 023567777887754211 11358999999999999999875 7887775543
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-11 Score=120.58 Aligned_cols=190 Identities=12% Similarity=0.117 Sum_probs=111.4
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+|++++||+|........ ...+.++ ++..++|+|+++||+++ .+.++.++.+ ..|++.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l--------~~~l~~~---~~~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~ 83 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKEL--------PSNFREL---LATDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYI 83 (215)
T ss_dssp CEEEEEECCCCTTTTCSSC--------CGGGHHH---HHCTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEE
T ss_pred CcEEEEEecCCCCCChHHH--------HHHHHHH---HhcCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEE
Confidence 5899999999975321100 1122222 34578999999999994 2334444443 368999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
++||||...... ...+.. .+|. ...+ +
T Consensus 84 V~GNHD~~~~~~-------------~~~~~~--~lp~------~~~~-------------------------------~- 110 (215)
T 2a22_A 84 VSGDLDSAIFNP-------------DPESNG--VFPE------YVVV-------------------------------Q- 110 (215)
T ss_dssp CCCTTCCSCCBC-------------CGGGTB--CCCS------EEEE-------------------------------E-
T ss_pred ecCCCcCccccc-------------ChhhHh--hCCc------eEEE-------------------------------e-
Confidence 999999742100 000000 0000 0000 0
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
...+.|++.|.+++.... . .+.+..++++.++|++++||+|......
T Consensus 111 ---~~~~~i~l~Hg~~~~~~~---~-----~~~l~~~~~~~~~d~vl~GHtH~~~~~~---------------------- 157 (215)
T 2a22_A 111 ---IGEFKIGLMHGNQVLPWD---D-----PGSLEQWQRRLDCDILVTGHTHKLRVFE---------------------- 157 (215)
T ss_dssp ---ETTEEEEEECSTTSSSTT---C-----HHHHHHHHHHHTCSEEEECSSCCCEEEE----------------------
T ss_pred ---cCCeEEEEEcCCccCCCC---C-----HHHHHHHHhhcCCCEEEECCcCCCccEe----------------------
Confidence 012478888965543211 1 2456667777899999999999854321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEe
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIR 635 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k 635 (639)
.+++.++..|+.+...... ......+|..++++++.++++++...+|++ +.+..+.|
T Consensus 158 ---~~~~~~inpGS~~~~~~~~---------~~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 ---KNGKLFLNPGTATGAFSAL---------TPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp ---ETTEEEEECCCSSCCCCTT---------STTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ---eCCEEEEECCcccccCCCC---------CCCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 0235667778776532110 011246899999999999999988766764 55555443
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.31 E-value=5.9e-12 Score=127.02 Aligned_cols=213 Identities=8% Similarity=0.004 Sum_probs=115.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh---cC--CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN---NG--NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~---~~--~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~v 402 (639)
++++++||+|.. ...++++++.+. .. ++|+|+++||+++.+.... +..+.+..+....
T Consensus 2 m~i~~isD~H~~--------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~ 64 (252)
T 1nnw_A 2 VYVAVLANIAGN--------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKE 64 (252)
T ss_dssp CEEEEEECCTTC--------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHS
T ss_pred cEEEEEeecCCC--------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhc
Confidence 589999999942 234566666665 55 7999999999996543332 2334444433235
Q ss_pred ceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 006591 403 SYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKD 482 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~ 482 (639)
|+++++||||........ . +. .+..... ++........+. ........+|++||++.
T Consensus 65 ~~~~v~GNhD~~~~~~~~-----~----~~-~~~~~~~------------~~~~~~~~~~~~-~~~~~l~~~~~~~L~~l 121 (252)
T 1nnw_A 65 NVKIIRGKYDQIIAMSDP-----H----AT-DPGYIDK------------LELPGHVKKALK-FTWEKLGHEGREYLRDL 121 (252)
T ss_dssp CEEEECCHHHHHHHHSCT-----T----CS-SSGGGGG------------SSCCHHHHHHHH-HHHHHHHHHHHHHHHTS
T ss_pred CeeEEecchHHHhhcccc-----c----cC-Ccccccc------------hhhhHHHHHHHH-HHHHHCCHHHHHHHHhC
Confidence 899999999973210000 0 00 0000000 000000000000 00001346788898764
Q ss_pred HhhccCCCCCeEEEEeccCCccCC-C-CCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCC
Q 006591 483 LASVDRSKTPWLIFAGHRPMYSSL-D-GFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDD 559 (639)
Q Consensus 483 La~~~r~~~pwvIV~~H~P~y~~~-~-~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~ 559 (639)
.......-....|++.|++++... . ...... .+.+..++.++ +++++++||+|......
T Consensus 122 p~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------------- 183 (252)
T 1nnw_A 122 PIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQP---TSYYEAIMRPVKDYEMLIVASPMYPVDAM--------------- 183 (252)
T ss_dssp CSCEEEEETTEEEEEESSCSSCTTTCCCCSSCC---HHHHHHHHGGGTTSSEEEESTTCSEEEEE---------------
T ss_pred CceEEEeeCCcEEEEEcCCCCCCcccccCCCCC---HHHHHHHHhcCCCCCEEEECCccccceEe---------------
Confidence 332211112246888898874322 1 111111 35677788888 99999999999855321
Q ss_pred CCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEE
Q 006591 560 NGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFV 620 (639)
Q Consensus 560 ~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~ 620 (639)
.+++++|..|+.|.+... ....+|..+++++.+++++.+
T Consensus 184 ----------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 184 ----------TRYGRVVCPGSVGFPPGK------------EHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp ----------ETTEEEEEECCSSSCSSS------------SCCEEEEEEETTTCCEEEEEE
T ss_pred ----------cCCeEEEECCCccCCCCC------------CCcceEEEEECCCCeEEEEEe
Confidence 023567888888764321 013478888887766666554
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=7e-11 Score=127.29 Aligned_cols=189 Identities=12% Similarity=0.089 Sum_probs=102.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc-HHHHHHHHHhhhhhhc-CCc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF-LVEWDFFLHQITPVAS-RVS 403 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~-~~~wd~f~~~l~~l~~-~vP 403 (639)
..+||++++|+|.+........ ........++++++.+.+.++|+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~-r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDD-REKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHH-HHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEccCCCCccccCcch-hhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 5799999999998642110000 000113467788888888899999999999865422 2345566677776653 589
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHH---H
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWI---Q 480 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL---~ 480 (639)
+++++||||........ .....+...+..-. ...++..+-+++.|+.++..... ......+|| .
T Consensus 98 v~~v~GNHD~~~~~~~~---------~~~~~l~~~v~~l~---~~~v~~~~~~~v~i~gl~~~~~~-~~~~~~~~l~~l~ 164 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEE---------SPLALLKDYVKILD---GKDVINVNGEEIFICGTYYHKKS-KREEMLDKLKNFE 164 (386)
T ss_dssp EEECCCGGGSCSSTTSC---------CGGGGGTTTCEECS---EEEEEEETTEEEEEEEECCCCST-THHHHHHHHHHHH
T ss_pred EEEEcCCCCCCcccccc---------CHHHHHHHHeEEcC---CCcEEEeCCCCEEEEeCCCCCHH-HHHHHHHHHHHhh
Confidence 99999999974211100 00001111010000 01111111245888888864332 112333333 3
Q ss_pred HHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 481 KDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 481 ~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
..+. ...+.|+++|+|+........... +.. +. ++|++++||.|..++
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~~~------~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYELE------HFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCSSC------GGG-SC--CCSEEEECSCCSCEE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCcccC------HHH-hh--hCCeEEccCCCCCcc
Confidence 2222 234589999999853211000000 011 11 399999999998743
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-10 Score=117.01 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=117.2
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+.+|++++||+|.. ...++++++.+. ++|.++++||++....... +..+.+..+. +++
T Consensus 2 ~~mri~~isDiHg~--------------~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~~---~~~ 59 (246)
T 3rqz_A 2 NAMRILIISDVHAN--------------LVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVLA---PNI 59 (246)
T ss_dssp CCCCEEEECCCTTC--------------HHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHHC---SSE
T ss_pred CCcEEEEEeecCCC--------------HHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhcC---CCE
Confidence 45899999999932 345677777765 8999999999996543322 3334444331 368
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~ 485 (639)
.+.||||...... +... .+..... ....| .......++++||++....
T Consensus 60 ~v~GNhD~~~~~~---~~~~--------~~~~~~~-----~~~~~----------------~~~~l~~~~~~~L~~lp~~ 107 (246)
T 3rqz_A 60 SVIGNHDWACIGR---LSLD--------EFNPVAR-----FASYW----------------TTMQLQAEHLQYLESLPNR 107 (246)
T ss_dssp ECCCHHHHHHTCC---CCCC----------CGGGG-----CHHHH----------------HHHHCCHHHHHHHHHCCSE
T ss_pred EEeCchHHHHhcc---CCcc--------ccCHHHH-----HHHHH----------------HHHHcCHHHHHHHHhCCcE
Confidence 9999999742110 0000 0000000 00000 0012457889999864433
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc-eeecccCCeecCCCccCCCCCcc
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE-RTCSVFRNKCMGIPTKDDNGIDT 564 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye-Rt~p~~~~~~~~~~~~d~~G~~~ 564 (639)
... . .|++.|.++......+... ...+..++++++++++|+||+|... +...- +..+.-.+... .+ ..
T Consensus 108 ~~~-~---~i~~~Hg~p~~~~~~~~~~----~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~-~~~~~~~~~~~-~~-~~ 176 (246)
T 3rqz_A 108 MID-G---DWTVVHGSPRHPIWEYIYN----ARIAALNFPAFDTPLCFVGHTHVPLYIREDE-ALSNVAPHHPN-DG-EV 176 (246)
T ss_dssp EEE-T---TEEEESSCSSSTTTCCCCS----HHHHHHHGGGCCSSEEECCSSSSEEEEEHHH-HHTTCCCBCCC-TT-CE
T ss_pred EEE-C---CEEEEECCcCCccccccCC----hHHHHHHHhccCCCEEEECCcCcccEEEecc-ccccccccccc-cc-ce
Confidence 221 1 4777888876543211111 2456778899999999999999743 22100 00000000000 00 00
Q ss_pred ccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEE
Q 006591 565 YDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFV 620 (639)
Q Consensus 565 y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~ 620 (639)
+.- ..+...|..|+.|.+.+.. ..-+|+.++.+..+++++.+
T Consensus 177 ~~l--~~g~~ivNpGSVG~Prdg~------------p~A~Y~i~d~~~~~v~~~rv 218 (246)
T 3rqz_A 177 LDV--SSGRYIINPGAVGQPRDGD------------PRASYAIFEPDAQRVTFHRV 218 (246)
T ss_dssp EEC--SSSCEEEEECCSSCCCSSC------------CSEEEEEEEGGGTEEEEEEE
T ss_pred eec--CCCeEEEECCccCCCCCcC------------CcceEEEEECCCCEEEEEEe
Confidence 100 1235678889999764321 13378888887776666554
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=119.57 Aligned_cols=218 Identities=12% Similarity=0.100 Sum_probs=123.5
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
.++.|++++||+|.. ...++++++.+.+.++|.|+++||++..+... .+..+.++.+ .|+
T Consensus 9 ~~~~~i~~iSDiHg~--------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~ 68 (270)
T 3qfm_A 9 MDMTKIALLSDIHGN--------------TTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PIT 68 (270)
T ss_dssp --CEEEEEECCCTTC--------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEE
T ss_pred ccccEEEEEecCCCC--------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCE
Confidence 367999999999942 45677788888777899999999999654322 3344444433 378
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
+++.||||...... .. +.+ . |..+. ..+.. . .+ .........+|++||++.-.
T Consensus 69 ~~v~GNhD~~~~~~------~~--~~~--~----~~~~~----~~~~~----~----~~-~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 69 ARVLGNWEDSLWHG------VR--KEL--D----STRPS----QRYLL----R----QC-QYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp EECCCHHHHHHHHH------HT--TCS--C----TTSHH----HHHHH----H----HH-HHHHTTSCHHHHHHHHSCCS
T ss_pred EEEcCChHHHHHHh------hc--ccc--C----CCcHH----HHHHH----H----HH-HHHHHHcCHHHHHHHHhCCC
Confidence 99999999731100 00 000 0 00000 00000 0 00 00011356789999886443
Q ss_pred hccCCCCCeEEEEeccCCccCCC-CCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLD-GFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGID 563 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~-~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~ 563 (639)
.....-....|++.|..+..... .... ..-.+.+..++++.++|++|+||+|...... +
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~~~~~~--~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-~----------------- 181 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWGRELIH--TGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-G----------------- 181 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSSSTTST--TCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-C-----------------
T ss_pred ceEEEECCcEEEEEECCCCCCCCceecC--CCcHHHHHHHhcccCCCEEEECCcCchHhee-c-----------------
Confidence 32111123467788876643321 1110 0113567777888899999999999643211 0
Q ss_pred cccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCE-EEEEEEE
Q 006591 564 TYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQE-IQLEFVN 621 (639)
Q Consensus 564 ~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~-L~~e~~~ 621 (639)
.++..+|..|+.|.+....+.. .......|+.++++++. +.+++++
T Consensus 182 ------~~~~~~iNpGSvg~pr~~~~~~------~~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 182 ------TGGQLIVNPGSIGQPFFLDAQL------RKDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp ------TTSCEEEEECCSSSCCCSSTTG------GGCCCEEEEEEEEETTEEEEEEEEE
T ss_pred ------cCCEEEEECCCccCCCCCCccc------cCCCCCEEEEEEecCCCceEEEEEE
Confidence 1245788899998764321100 00123579999998776 6888865
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-10 Score=118.74 Aligned_cols=187 Identities=14% Similarity=0.112 Sum_probs=99.5
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+.+||+++||+|..... + +-.++|+||++||+++. +...+.+.+.+.++.+. ..+++
T Consensus 58 ~~mri~~iSD~H~~~~~-----------------l----~i~~~D~vi~aGDl~~~-g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 58 GHTRFVCISDTRSRTDG-----------------I----QMPYGDILLHTGDFTEL-GLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TEEEEEEEBCCTTCCTT-----------------C----CCCSCSEEEECSCCSSS-CCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCeEEEEEeeCCCCcch-----------------h----ccCCCCEEEECCcccCC-CCHHHHHHHHHHHHhCC-CCeEE
Confidence 56999999999975321 0 11579999999999964 55566677777776652 34689
Q ss_pred EecCCCCcCCCCCCCccCC---CCC-------CCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC---CCCCC
Q 006591 406 TAIGNHERDYVNSGSVYST---PDS-------GGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH---DWWLN 472 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~---~ds-------gge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~---~~~~g 472 (639)
+++||||+..... .+.. .+. ... ...+...-.++.+..--.--+..+++++|+...-.. .|...
T Consensus 115 ~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~ 191 (296)
T 3rl5_A 115 VIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLK-PEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFN 191 (296)
T ss_dssp ECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCC-HHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTB
T ss_pred EEcCCcccccchh--hhhhhhcccccccccccccc-cchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCC
Confidence 9999999843210 0000 000 000 000000000111100000114567889988844221 11111
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC-chhHHHHHHHHHHH-HhCCCeEEEeCcccccc
Q 006591 473 SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL-SVDKFFVKSVEPLL-LKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 473 ~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~-~~~~~~r~~l~~Ll-~~y~VdlvlsGH~H~Ye 541 (639)
.++.+++.+.+.... ....|++.|.|++....... .......+.|..++ ++++++++++||+|...
T Consensus 192 ~~~~~~~~~~~~~ip---~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~ 259 (296)
T 3rl5_A 192 LPRGQSLLDKWNLIP---EGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGY 259 (296)
T ss_dssp CCTTHHHHHHHTTSC---TTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGC
T ss_pred cchHHHHHHHHhhCC---CCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCC
Confidence 222234444444332 23368999999987643110 00000123455555 68999999999999743
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-09 Score=105.70 Aligned_cols=63 Identities=22% Similarity=0.418 Sum_probs=47.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+|.. ...++++++.+++.++|+|+++||+++. +.++.++.+ ..|++++
T Consensus 26 m~i~~iSD~Hg~--------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V 81 (190)
T 1s3l_A 26 MKIGIMSDTHDH--------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIAT 81 (190)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEE
T ss_pred eEEEEEeeCCCC--------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEE
Confidence 899999999931 3456677777766789999999999842 234444433 5799999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
+||||..
T Consensus 82 ~GNhD~~ 88 (190)
T 1s3l_A 82 YGNNDGE 88 (190)
T ss_dssp CCTTCCC
T ss_pred eCCCcch
Confidence 9999974
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.07 E-value=8e-10 Score=118.73 Aligned_cols=199 Identities=14% Similarity=0.195 Sum_probs=108.1
Q ss_pred eEEEEEecCCCCCCCCC-Ccc-ccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC--cHHHHHHHHHhhhhhhcCCc
Q 006591 328 MKFLAYGDMGKAPRDAS-TEH-YIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG--FLVEWDFFLHQITPVASRVS 403 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~-~~~-~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g--~~~~wd~f~~~l~~l~~~vP 403 (639)
+||++++|+|.+..... ... .........++++++.+.+.+||+||++||++++.. ....++.+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999998754100 000 001112456777877777789999999999994332 23345556666666543389
Q ss_pred eEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC---CCCCeEEEE--eC-CEEEEEEeCCCCC----CCCH
Q 006591 404 YMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS---KDRPWYSIE--QA-SVHFTVISTEHDW----WLNS 473 (639)
Q Consensus 404 ~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~---~~~~~Ysfd--~G-~v~fi~LDT~~~~----~~g~ 473 (639)
+++++||||.... ..+ ..+.. .++.+. ....-+.+. .| .+.|+.+.-.... ..+.
T Consensus 81 v~~i~GNHD~~~~---~~~----------~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~ 145 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLF----------GNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEG 145 (379)
T ss_dssp EEECCCTTSCTTH---HHH----------HHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHH
T ss_pred EEEEcCCCccccC---ccc----------ccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhcc
Confidence 9999999995210 000 00000 001000 000112222 23 4777776532211 1245
Q ss_pred HHHHHHHHHHhhc---cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 474 EQYKWIQKDLASV---DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 474 ~Q~~WL~~~La~~---~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
++.+|+.+.|+.. ......+.|+++|.++..... .......+...+...+...++|+++.||.|..+.
T Consensus 146 ~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~-~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~ 216 (379)
T 3tho_B 146 DFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAG-YAGIEQGREIIINRALIPSVVDYAALGHIHSFRE 216 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEE
T ss_pred chHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCcc-CCCCccccccccCHHHcCcCCCEEEcccccCCeE
Confidence 7789999888721 112345689999999854321 0000000001122223346899999999999865
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-08 Score=97.38 Aligned_cols=64 Identities=17% Similarity=0.103 Sum_probs=42.2
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
-+|++++||+|...... .++++++.+. .++|+|+++||+++. +..+.++.+ ..|++.
T Consensus 22 mmri~~iSD~Hg~~~~~------------~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~ 78 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMA------------SLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYG 78 (178)
T ss_dssp CEEEEEECCCCBTTTTC------------CCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEE
T ss_pred ceEEEEEecccCCCCHH------------HHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 37999999999421110 1223333333 579999999999852 233444443 368999
Q ss_pred ecCCCCc
Q 006591 407 AIGNHER 413 (639)
Q Consensus 407 v~GNHD~ 413 (639)
+.||||.
T Consensus 79 V~GNhD~ 85 (178)
T 2kkn_A 79 VHGNMDY 85 (178)
T ss_dssp CCCSSSC
T ss_pred EECCCCc
Confidence 9999996
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=98.95 E-value=9.8e-10 Score=106.70 Aligned_cols=149 Identities=16% Similarity=0.211 Sum_probs=88.4
Q ss_pred eEEEEEecCCCCCCCCC-CccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 328 MKFLAYGDMGKAPRDAS-TEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~-~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
++++++||+|.+..... ...+. ......+++.+.+++ .++|+|+++||+++.. .+++.+.+.++.+ ..|+
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~ 74 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEV--RFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRK 74 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTT--CCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEE
T ss_pred cEEEEEeccccCCCccccccCCC--CHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCE
Confidence 68999999997542100 00000 012345566666554 5899999999999653 2223344445444 3589
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La 484 (639)
+.++||||.... .+... |-. +. +..||+
T Consensus 75 ~~v~GNhD~~~~-----------------~~~~~-----------~~~----------l~----------~~~~l~---- 102 (195)
T 1xm7_A 75 ILVMGNHDKDKE-----------------SLKEY-----------FDE----------IY----------DFYKII---- 102 (195)
T ss_dssp EEECCTTCCCHH-----------------HHTTT-----------CSE----------EE----------SSEEEE----
T ss_pred EEEeCCCCCchh-----------------hhhhh-----------hhc----------hh----------HHHHHH----
Confidence 999999997310 11111 100 10 111221
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccce
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYER 542 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeR 542 (639)
+. ..+.|+++|+|++....... ....+.+..++.+++++++++||+|....
T Consensus 103 ~~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 103 EH----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp EE----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred hc----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 11 13479999999876543111 12357888899999999999999998654
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.5e-08 Score=109.85 Aligned_cols=245 Identities=11% Similarity=0.085 Sum_probs=128.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc-HHHHHHHHHhhhhh------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF-LVEWDFFLHQITPV------ 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~-~~~wd~f~~~l~~l------ 398 (639)
+.+||++++|+|.+...... .........++++++.+.+.+||+||++||+++.... ......+.+.++.+
T Consensus 31 ~~mrilhiSDlHLg~~~~~~--~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDA--VRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred CCEEEEEEeccCCCCccccc--chhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 57999999999987543211 1111234578888888888999999999999966432 23345555555543
Q ss_pred ----------------------------hcCCceEEecCCCCcCCCCCCCccCCCCCCCccc--cccccccCCCCCCCCC
Q 006591 399 ----------------------------ASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECG--IPYETYFPMPTPSKDR 448 (639)
Q Consensus 399 ----------------------------~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~--~~y~~~f~~P~~~~~~ 448 (639)
...+|++++.||||... +.+.. +..... .....+|..... .+.
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~-g~~~l-----~~~~lL~~~glv~~fg~~~~-~e~ 181 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT-GADAL-----CALDILSCAGFVNHFGRSMS-VEK 181 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCB-TTTTB-----CHHHHHHHHTSEEECCCCCC-SSC
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc-ccccc-----CHHHHhccCCcEEEECCcCc-ccc
Confidence 13799999999999731 10000 000000 001122321110 011
Q ss_pred C---eEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHHHhh-----ccC---CCCCeEEEEeccCCccCCCCCCchhHH
Q 006591 449 P---WYSIEQAS--VHFTVISTEHDWWLNSEQYKWIQKDLAS-----VDR---SKTPWLIFAGHRPMYSSLDGFLSVDKF 515 (639)
Q Consensus 449 ~---~Ysfd~G~--v~fi~LDT~~~~~~g~~Q~~WL~~~La~-----~~r---~~~pwvIV~~H~P~y~~~~~~~~~~~~ 515 (639)
. -..+.-|+ +.+..+.-. ..+ .+.+.+.. ... ....+.|++.|......+. .....
T Consensus 182 i~~~Pv~l~~g~~~valyGl~~~-----~~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~-~~~ip-- 250 (431)
T 3t1i_A 182 IDISPVLLQKGSTKIALYGLGSI-----PDE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGS-TNFIP-- 250 (431)
T ss_dssp EEECCEEEEETTEEEEEEEECCC-----CHH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSS-SSSCC--
T ss_pred eeeEEEEEecCCEeEEEEeCCCC-----CHH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCc-cccCC--
Confidence 0 01233454 455555321 122 23333321 111 1223689999997643221 01111
Q ss_pred HHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCc
Q 006591 516 FVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATW 595 (639)
Q Consensus 516 ~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~w 595 (639)
.-+...++|+++.||.|..+....... ..++..+-.|+... ..+.
T Consensus 251 ------~~l~~~~~Dyv~lGH~H~~~~~~~~~~---------------------~~~~~i~yPGS~~~--~s~~------ 295 (431)
T 3t1i_A 251 ------EQFLDDFIDLVIWGHEHECKIAPTKNE---------------------QQLFYISQPGSSVV--TSLS------ 295 (431)
T ss_dssp ------GGGSCTTCCEEEECSCCSCEEEEEECT---------------------TTCCEEEECCCSSC--CSCC------
T ss_pred ------HhHhhCCCCEEEecccccccccccccC---------------------CCCEEEEeCCCCcc--cCcC------
Confidence 113345799999999999775321000 01233333444321 1111
Q ss_pred cceecccccEEEEEEeCCEEEEEEEECCCCe
Q 006591 596 SLSRVAKFGYLRGHATKQEIQLEFVNADTRK 626 (639)
Q Consensus 596 s~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~ 626 (639)
.......||..++++++.+.++++....-+
T Consensus 296 -e~E~~~k~~~lvei~~~~~~ve~i~l~~~R 325 (431)
T 3t1i_A 296 -PGEAVKKHVGLLRIKGRKMNMHKIPLHTVR 325 (431)
T ss_dssp -HHHHSCCEEEEEEEETTEEEEEEEECSSSC
T ss_pred -cccCCCCEEEEEEEECCEEEEEEEECCCcc
Confidence 111234599999999999999999865344
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.89 E-value=4.9e-08 Score=105.48 Aligned_cols=257 Identities=13% Similarity=0.086 Sum_probs=130.4
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhh------
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITP------ 397 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~------ 397 (639)
.+.+||++++|+|.+...... .........++++++.+.+.++|+|+++||+++..... .....+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~--~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~ 88 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDP--VRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDK 88 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSC
T ss_pred CCCeEEEEEEcCCCCCccccc--ccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCC
Confidence 367999999999987542210 11112356788888888889999999999999664332 223334444333
Q ss_pred ------h----------------------hcCCceEEecCCCCcCCCCCCCccCCCCCCCccc--cccccccCCCCCCCC
Q 006591 398 ------V----------------------ASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECG--IPYETYFPMPTPSKD 447 (639)
Q Consensus 398 ------l----------------------~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~--~~y~~~f~~P~~~~~ 447 (639)
+ ...+|++++.||||.... .+ + .++.+.. ...-..|..... .+
T Consensus 89 ~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~-~~--~---~s~~~lL~~~g~v~l~g~~~~-~~ 161 (417)
T 4fbw_A 89 PCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG-DG--R---YSALDILQVTGLVNYFGRVPE-ND 161 (417)
T ss_dssp CCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC--------C---CCHHHHHHHTTSCEECCCCC----
T ss_pred cccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccc-cc--c---ccHHHHhccCCeEEEeCCccc-CC
Confidence 1 137999999999997311 00 0 0000000 000011211100 00
Q ss_pred CC---eEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHHHHhh-ccC---CCCCeEEEEeccCCccCCCCCCchhHHHHH
Q 006591 448 RP---WYSIEQAS--VHFTVISTEHDWWLNSEQYKWIQKDLAS-VDR---SKTPWLIFAGHRPMYSSLDGFLSVDKFFVK 518 (639)
Q Consensus 448 ~~---~Ysfd~G~--v~fi~LDT~~~~~~g~~Q~~WL~~~La~-~~r---~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~ 518 (639)
+. -..+.-|+ +.+..+.-. ..+.-..++.+.... ... ....+.|++.|......... ....
T Consensus 162 ~i~~~pv~l~~g~~~valyG~~~~----~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~-~yip----- 231 (417)
T 4fbw_A 162 NIVVSPILLQKGFTKLALYGISNV----RDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPT-SYLP----- 231 (417)
T ss_dssp CEEECCEEEEETTEEEEEEEECCC----CHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSS-SSCC-----
T ss_pred ceeEEeEEEEecCceEEEEeccCC----chhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCc-ccCc-----
Confidence 10 01234444 444444421 111111233322221 111 23456899999987543210 0000
Q ss_pred HHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccce
Q 006591 519 SVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLS 598 (639)
Q Consensus 519 ~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~ 598 (639)
.-+...++|+++.||.|..+...-. + . .+++..+-.|+.... .+. ..
T Consensus 232 ---~~l~~~~~DyvalGH~H~~~~~~~~-~---------~-----------~~g~~i~~PGS~~~~--s~~-------e~ 278 (417)
T 4fbw_A 232 ---ESFIQDFYDFVLWGHEHECLIDGSY-N---------P-----------TQKFTVVQPGSTIAT--SLS-------PG 278 (417)
T ss_dssp ---GGGSCTTCSEEEEESCCSCEEEEEE-E---------T-----------TTTEEEEECCCSSCS--SCC-------HH
T ss_pred ---hhHhhcCCCEEEecCccccceeccc-c---------C-----------CCCEEEEECCCCCcC--CCc-------cc
Confidence 1144568999999999987653100 0 0 012333334443221 111 00
Q ss_pred ecccccEEEEEEeCCEEEEEEEECCCCe--EEEEEEE
Q 006591 599 RVAKFGYLRGHATKQEIQLEFVNADTRK--VEDSFRI 633 (639)
Q Consensus 599 ~~~~~Gy~~v~v~~~~L~~e~~~~~dG~--v~D~f~I 633 (639)
.....||..++++++.+.++++....-+ +..++.+
T Consensus 279 E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L 315 (417)
T 4fbw_A 279 ETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIIL 315 (417)
T ss_dssp HHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEG
T ss_pred cCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEe
Confidence 1135699999999999999999865433 3444443
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-07 Score=103.61 Aligned_cols=88 Identities=14% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-HHHHHHHHhhhh------
Q 006591 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-VEWDFFLHQITP------ 397 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-~~wd~f~~~l~~------ 397 (639)
.+.+||++++|+|.+...... .........++++++.+.+.+||+||++||+++..... .....+++.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~--~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~ 151 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDP--VRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDK 151 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCT--TTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSC
T ss_pred CCCeEEEEEecccCCCcccCc--ccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCC
Confidence 367999999999987543210 11112356788888888889999999999999665332 223344444332
Q ss_pred ------h----------------------hcCCceEEecCCCCcC
Q 006591 398 ------V----------------------ASRVSYMTAIGNHERD 414 (639)
Q Consensus 398 ------l----------------------~~~vP~~~v~GNHD~~ 414 (639)
+ ...+|++++.||||..
T Consensus 152 ~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 152 PCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred cchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1378999999999973
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.79 E-value=5.1e-08 Score=102.61 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=58.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cHHHHHHHHHhhhhhhc-CCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FLVEWDFFLHQITPVAS-RVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~~~wd~f~~~l~~l~~-~vP~~ 405 (639)
+||++++|+|.+...... ..........++++++.+.+.++|+|+++||+++... ....+..+.+.++.+.. .+|++
T Consensus 1 mkilh~sD~Hlg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-PQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-HHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEcccCCCCcccCC-chhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 589999999987421000 0000011345677777777889999999999996542 23345666667766643 68999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
+++||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999974
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.71 E-value=3.1e-07 Score=90.13 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=50.3
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc---HHH--HHHHHHhhhhhhcC
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF---LVE--WDFFLHQITPVASR 401 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~---~~~--wd~f~~~l~~l~~~ 401 (639)
.++++++||+|.. ...++++++.+++.++|+|+++||+++.... ..+ -.++.+.++.+ .
T Consensus 25 mmki~~iSD~H~~--------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--~ 88 (208)
T 1su1_A 25 MMKLMFASDIHGS--------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--A 88 (208)
T ss_dssp CCEEEEECCCTTB--------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--G
T ss_pred cEEEEEEEcCCCC--------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc--C
Confidence 3799999999953 3456777777666689999999999964321 111 13445555443 2
Q ss_pred CceEEecCCCCcC
Q 006591 402 VSYMTAIGNHERD 414 (639)
Q Consensus 402 vP~~~v~GNHD~~ 414 (639)
.|++.+.||||..
T Consensus 89 ~~v~~V~GNHD~~ 101 (208)
T 1su1_A 89 HKVIAVRGNCDSE 101 (208)
T ss_dssp GGEEECCCTTCCH
T ss_pred CceEEEECCCchH
Confidence 5899999999973
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.47 E-value=2e-07 Score=103.95 Aligned_cols=192 Identities=18% Similarity=0.135 Sum_probs=93.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc----CCC-cEEEEcCCccccCCcHH--HHHHHHHhhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN----GNV-DSVFHIGDISYATGFLV--EWDFFLHQITPV 398 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~----~~p-DfVl~~GDl~y~~g~~~--~wd~f~~~l~~l 398 (639)
..++|++++|+|........ ..+....+..+++++++ .++ ++++.+||+........ ..+...+.|..+
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~----~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l 82 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEY----GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV 82 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTT----SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH
T ss_pred eEEEEEEecccccCccCCCC----CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc
Confidence 46899999999975321100 01122334444444432 245 79999999984322110 122334444443
Q ss_pred hcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCCC-C------C--CCCCeEEEEeCC--EEEEEEeC
Q 006591 399 ASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMPT-P------S--KDRPWYSIEQAS--VHFTVIST 465 (639)
Q Consensus 399 ~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P~-~------~--~~~~~Ysfd~G~--v~fi~LDT 465 (639)
. +-+.++||||+++... . ...+. ..|+.-. + + ..+.|..++.++ +.|+.+.+
T Consensus 83 --g-~d~~~~GNHEfd~g~~--~----------l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~ 147 (516)
T 1hp1_A 83 --G-YDAMAIGNHEFDNPLT--V----------LRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTT 147 (516)
T ss_dssp --T-CCEEECCGGGGSSCHH--H----------HHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEEC
T ss_pred --C-CCEEeeccccccCCHH--H----------HHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecc
Confidence 2 3367899999964110 0 00000 0111000 0 0 013466778887 45666655
Q ss_pred CCC--CC-C----------CHHH-HHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeE
Q 006591 466 EHD--WW-L----------NSEQ-YKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDL 531 (639)
Q Consensus 466 ~~~--~~-~----------g~~Q-~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdl 531 (639)
... +. + ..++ .+|++ .|++. .+...+|+++|.|............. ...+...+...+||+
T Consensus 148 ~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~--~~~la~~~~~~~iDl 222 (516)
T 1hp1_A 148 DDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPG--DVEMARALPAGSLAM 222 (516)
T ss_dssp TTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCC--HHHHHHHSCTTSSSE
T ss_pred cCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCch--HHHHHHhCCCCceeE
Confidence 421 11 1 0122 23333 34321 24567999999998543221100000 122333334456999
Q ss_pred EEeCcccccc
Q 006591 532 VLFGHVHNYE 541 (639)
Q Consensus 532 vlsGH~H~Ye 541 (639)
+|+||.|...
T Consensus 223 ilgGHtH~~~ 232 (516)
T 1hp1_A 223 IVGGHSQDPV 232 (516)
T ss_dssp EECCSSCCBC
T ss_pred EECCCCCccc
Confidence 9999999754
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=1.6e-06 Score=97.51 Aligned_cols=188 Identities=14% Similarity=0.067 Sum_probs=97.0
Q ss_pred CceEEEEEecCCCCCCCCCCccccC------cChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQ------PGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQIT 396 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~------pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l~ 396 (639)
..++|++++|+|...... .+.. .+....+..+++++++.++| +++.+||++....... ..+...+.+.
T Consensus 28 ~~l~Il~~~D~H~~~~~~---~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln 104 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV---ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMH 104 (552)
T ss_dssp CEEEEEEECCCTTCCSCE---EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc---cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHH
Confidence 579999999999642210 0000 13345667777777666787 8899999995432111 1223333343
Q ss_pred hhhcCCceEEecCCCCcCCCCCCCccC-CCCCCCcccccccc-ccCCCCC----CCCCCeEEEEeCC--EEEEEEeCCCC
Q 006591 397 PVASRVSYMTAIGNHERDYVNSGSVYS-TPDSGGECGIPYET-YFPMPTP----SKDRPWYSIEQAS--VHFTVISTEHD 468 (639)
Q Consensus 397 ~l~~~vP~~~v~GNHD~~~~~~~~~y~-~~dsgge~~~~y~~-~f~~P~~----~~~~~~Ysfd~G~--v~fi~LDT~~~ 468 (639)
.+ . +-+.++||||+++... .... ... ...++.. ....... ...+.|..++.++ +.|+.+.+...
T Consensus 105 ~l--g-~d~~~lGNHEfd~g~~-~l~~~l~~----~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~ 176 (552)
T 2z1a_A 105 RL--R-YRAMALGNHEFDLGPG-PLADFLKG----ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDT 176 (552)
T ss_dssp HT--T-CCEEECCGGGGTTCHH-HHHHHHTT----CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTH
T ss_pred hc--C-CCccccccccccCCHH-HHHHHHhh----CCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccch
Confidence 32 2 3367899999964100 0000 000 0001100 0000000 0023466788887 45566655321
Q ss_pred ---------C--CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCc
Q 006591 469 ---------W--WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGH 536 (639)
Q Consensus 469 ---------~--~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH 536 (639)
. ....++.+...+.|++ .+...+|++.|.|... + ..+.++ .+||++|+||
T Consensus 177 ~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~--------d-------~~la~~~~gvDlIlgGH 238 (552)
T 2z1a_A 177 REISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE--------D-------LKLARRLVGVQVIVGGH 238 (552)
T ss_dssp HHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH--------H-------HHHHTTCSSCCEEEECS
T ss_pred hhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch--------H-------HHHHHhCCCccEEEeCC
Confidence 0 0112333333444543 3456799999988521 0 123333 4899999999
Q ss_pred ccccce
Q 006591 537 VHNYER 542 (639)
Q Consensus 537 ~H~YeR 542 (639)
.|....
T Consensus 239 tH~~~~ 244 (552)
T 2z1a_A 239 SHTLLG 244 (552)
T ss_dssp SCCCBS
T ss_pred cCcccc
Confidence 998654
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.2e-06 Score=98.42 Aligned_cols=193 Identities=17% Similarity=0.183 Sum_probs=96.7
Q ss_pred CCceEEEEEecCCCCCCCCCC--cc----ccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHH--HHHHHHHhh
Q 006591 325 SDEMKFLAYGDMGKAPRDAST--EH----YIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLV--EWDFFLHQI 395 (639)
Q Consensus 325 ~~~~~f~v~gD~~~~~~~~~~--~~----~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~--~wd~f~~~l 395 (639)
...++|+.++|+|..-..... .. ....+....+..+++++++.++ +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 357999999999964321100 00 0011334556666677665555 69999999995432211 123334444
Q ss_pred hhhhcCCceEEecCCCCcCCCCCC---CccCCCCCCCcccccccc-ccC-----CCCC-CCCCCeEEEEeCCEE--EEEE
Q 006591 396 TPVASRVSYMTAIGNHERDYVNSG---SVYSTPDSGGECGIPYET-YFP-----MPTP-SKDRPWYSIEQASVH--FTVI 463 (639)
Q Consensus 396 ~~l~~~vP~~~v~GNHD~~~~~~~---~~y~~~dsgge~~~~y~~-~f~-----~P~~-~~~~~~Ysfd~G~v~--fi~L 463 (639)
..+ ... +.++||||+++.... ..+. ++..++.. ... .|.. ...+.|..++.++++ ||.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~ 173 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 173 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEE
T ss_pred Hhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEe
Confidence 443 333 577999998642100 0000 00000000 000 0000 001346678888865 4555
Q ss_pred eCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEe
Q 006591 464 STEHD--W-WLN-----SEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLF 534 (639)
Q Consensus 464 DT~~~--~-~~g-----~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~Vdlvls 534 (639)
.+... + .++ ....+.+++.+++........+|++.|.+... + . .+.++ .+||++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~---~la~~~~giDlIlg 238 (546)
T 4h2g_A 174 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----K---LIAQKVRGVDVVVG 238 (546)
T ss_dssp ECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----H---HHHHHSTTCCEEEC
T ss_pred cccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----H---HHHHhCCCCcEEEe
Confidence 44310 0 011 12234445544443323466799999987421 1 1 12222 37999999
Q ss_pred Ccccccc
Q 006591 535 GHVHNYE 541 (639)
Q Consensus 535 GH~H~Ye 541 (639)
||.|...
T Consensus 239 GHtH~~~ 245 (546)
T 4h2g_A 239 GHSNTFL 245 (546)
T ss_dssp CSSCCCC
T ss_pred CCcCccc
Confidence 9999854
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.29 E-value=7.3e-06 Score=91.64 Aligned_cols=196 Identities=13% Similarity=0.152 Sum_probs=98.6
Q ss_pred CceEEEEEecCCCCCCCCCCc--cccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHH--------HHHHHHh
Q 006591 326 DEMKFLAYGDMGKAPRDASTE--HYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVE--------WDFFLHQ 394 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~--~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~--------wd~f~~~ 394 (639)
..++|++++|+|..-...... .....+....+..+++++++.+++ +++.+||++..... .. .....+.
T Consensus 18 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~-~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPF-CNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHH-HHHHHHTTCSSHHHHHH
T ss_pred CcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHH-HHHHhhcccCcchHHHH
Confidence 579999999999643211000 001223456677777777776776 77889999954321 11 1223333
Q ss_pred hhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC-------C---CCCCeEEEEeCCE--EEEE
Q 006591 395 ITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP-------S---KDRPWYSIEQASV--HFTV 462 (639)
Q Consensus 395 l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~-------~---~~~~~Ysfd~G~v--~fi~ 462 (639)
+..+ ... +.++||||+++... ....+.+....|.- + ....|..++.+++ -||.
T Consensus 97 ln~l--g~D-~~t~GNHefd~G~~------------~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG 161 (527)
T 3qfk_A 97 YNRM--AFD-FGTLGNHEFNYGLP------------YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIG 161 (527)
T ss_dssp HHHT--CCC-EECCCGGGGTTCHH------------HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEE
T ss_pred HHhc--CCc-EEeccccccccCHH------------HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEE
Confidence 3332 333 56799999864210 00000000000000 0 0134667788885 4566
Q ss_pred EeCCCC--CCC--------CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCC-CC-----CchhHHHHHHHHHHHHh
Q 006591 463 ISTEHD--WWL--------NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLD-GF-----LSVDKFFVKSVEPLLLK 526 (639)
Q Consensus 463 LDT~~~--~~~--------g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~-~~-----~~~~~~~r~~l~~Ll~~ 526 (639)
+.+... +.. -....+.+++.+++.. .+...+|+++|.+...... .. ...+. ..+|..-+ .
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~ 237 (527)
T 3qfk_A 162 LTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-S 237 (527)
T ss_dssp EECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-G
T ss_pred eccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-C
Confidence 655421 110 0122344455444432 3466799999987643211 00 01100 11222212 2
Q ss_pred CCCeEEEeCcccccc
Q 006591 527 NKVDLVLFGHVHNYE 541 (639)
Q Consensus 527 y~VdlvlsGH~H~Ye 541 (639)
-+||++|+||.|...
T Consensus 238 ~giDlIlgGHtH~~~ 252 (527)
T 3qfk_A 238 KDIDIFITGHQHRQI 252 (527)
T ss_dssp GGCSEEECCSSCCEE
T ss_pred CCCcEEEECCCCccc
Confidence 479999999999854
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.29 E-value=8.5e-06 Score=91.71 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhhcC--C--Cc-EEEEcCCccccCCcHHHH---HHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCC
Q 006591 354 LSVVKAMSDEVNNG--N--VD-SVFHIGDISYATGFLVEW---DFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTP 425 (639)
Q Consensus 354 ~~~~~~l~~~i~~~--~--pD-fVl~~GDl~y~~g~~~~w---d~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~ 425 (639)
...+..+++++++. + +| +++.+||++.... ...+ +...+.+..+ ..+++ + ||||+++...
T Consensus 104 ~arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~~------- 171 (562)
T 2wdc_A 104 MGALTALIRDQKARVEAEGGKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGRE------- 171 (562)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCHH-------
T ss_pred HHHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCHH-------
Confidence 44555666666544 3 88 8999999995432 2222 2334444444 56665 6 9999863110
Q ss_pred CCCCccccccccc--cCCCC-C------C--CCCCeEEEEeCCE--EEEEEeCCC-----------C--CCCCHHHHHHH
Q 006591 426 DSGGECGIPYETY--FPMPT-P------S--KDRPWYSIEQASV--HFTVISTEH-----------D--WWLNSEQYKWI 479 (639)
Q Consensus 426 dsgge~~~~y~~~--f~~P~-~------~--~~~~~Ysfd~G~v--~fi~LDT~~-----------~--~~~g~~Q~~WL 479 (639)
....+.+. |++-. + + .-+.|-.++.+++ -|+.+.+.. . +....++.+-+
T Consensus 172 -----~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (562)
T 2wdc_A 172 -----RVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEA 246 (562)
T ss_dssp -----HHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHH
T ss_pred -----HHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHH
Confidence 00000000 11000 0 0 0134667788875 455554421 0 11122333323
Q ss_pred HHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCcccccc
Q 006591 480 QKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGHVHNYE 541 (639)
Q Consensus 480 ~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH~H~Ye 541 (639)
.+.|++ .+...+|++.|.|... + ..+.++ .+||++|+||.|...
T Consensus 247 v~~l~~---~~~d~iIvLsH~g~~~--------d-------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 247 VDKARA---EGANAVVLLSHNGMQL--------D-------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHH---TTCSEEEEEECSCHHH--------H-------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHH---CCCCEEEEEeCCCCcc--------h-------HHHHhcCCCCcEEEeCCCCCCC
Confidence 333442 3456799999988521 0 123344 489999999999854
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-05 Score=89.30 Aligned_cols=205 Identities=14% Similarity=0.138 Sum_probs=96.6
Q ss_pred CceEEEEEecCCCCCCCCCC----ccccCcChHHHHHHHHHHhhcCCCcEEEE-cCCccccCCcHHH---HHHHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDAST----EHYIQPGSLSVVKAMSDEVNNGNVDSVFH-IGDISYATGFLVE---WDFFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~----~~~~~pg~~~~~~~l~~~i~~~~pDfVl~-~GDl~y~~g~~~~---wd~f~~~l~~ 397 (639)
..++|+.++|+|..-..... ......+....+..+++++++.+++.+++ +||++... .... .+...+.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHHHh
Confidence 46999999999954321100 00112234566777777777777886666 99998532 1111 1233333332
Q ss_pred hhcCCceEEecCCCCcCCCCCC--CccCCCCCCCc--cccccccccCCCCCCCCCCeEEEEeCCEE--EEEEeCCC----
Q 006591 398 VASRVSYMTAIGNHERDYVNSG--SVYSTPDSGGE--CGIPYETYFPMPTPSKDRPWYSIEQASVH--FTVISTEH---- 467 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge--~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~--fi~LDT~~---- 467 (639)
+ -+-+.++||||+++.... ..+. ..+.. +...+...-..|. ..+.|..++.++++ |+.+-+..
T Consensus 84 l---g~D~~tlGNHEfd~G~~~l~~~l~--~~~~p~l~aNv~~~~~~~p~--~~~py~i~e~~G~kIgiiG~t~~~~~~~ 156 (509)
T 3ive_A 84 M---PFDAVTIGNHEFDHGWDNTLLQLS--QAKFPIVQGNIFYQNSSKSF--WDKPYTIIEKDGVKIGVIGLHGVFAFND 156 (509)
T ss_dssp S---CCSEECCCGGGGTTCHHHHHHHHT--TCSSCBCCCSEEETTSCCBS--SSCSEEEEEETTEEEEEEEEECHHHHHH
T ss_pred c---CCcEEeecccccccCHHHHHHHHh--hCCCCEEEEEEEECCCCCcc--CcCCeEEEEECCEEEEEEecccCccccc
Confidence 2 234667899998642100 0000 00000 0000000000010 02346677888854 55553310
Q ss_pred -CCC------CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCc--hhHHHHHHHHHHHHh-CCCeEEEeCcc
Q 006591 468 -DWW------LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLS--VDKFFVKSVEPLLLK-NKVDLVLFGHV 537 (639)
Q Consensus 468 -~~~------~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~--~~~~~r~~l~~Ll~~-y~VdlvlsGH~ 537 (639)
.+. .-....+.+++.+++.... ...+|+++|.+.-........ ..... ..-..+.++ -+||++|+||.
T Consensus 157 ~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~-~~d~~la~~~~giDlIlgGHt 234 (509)
T 3ive_A 157 TVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRAL-DKDIQTASQVKGLDILITGHA 234 (509)
T ss_dssp HSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCC-HHHHHHHHHCSSCCEEEEESS
T ss_pred ccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCcccccccccccccc-chHHHHHhcCCCCcEEEeCCc
Confidence 000 0122344455555544333 677999999885322110000 00000 011223333 37999999999
Q ss_pred ccc
Q 006591 538 HNY 540 (639)
Q Consensus 538 H~Y 540 (639)
|..
T Consensus 235 H~~ 237 (509)
T 3ive_A 235 HVG 237 (509)
T ss_dssp CCC
T ss_pred Ccc
Confidence 963
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=9.3e-06 Score=91.78 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=94.4
Q ss_pred CceEEEEEecCCCCCCCCCC-------ccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHH--HHHHHHHhh
Q 006591 326 DEMKFLAYGDMGKAPRDAST-------EHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLV--EWDFFLHQI 395 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~-------~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~--~wd~f~~~l 395 (639)
-.++|++++|+|..-..... ......+....+..+++++++.+++ ++|..||++....... ..+...+.|
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 35899999999954321100 0000112355566666666655565 8999999995432111 112333444
Q ss_pred hhhhcCCceEEecCCCCcCCCCCC--CccCCCCCCCccccccc-c-cc---CCCCCCCCCCeEEEEeCCEE--EEEEeC-
Q 006591 396 TPVASRVSYMTAIGNHERDYVNSG--SVYSTPDSGGECGIPYE-T-YF---PMPTPSKDRPWYSIEQASVH--FTVIST- 465 (639)
Q Consensus 396 ~~l~~~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~~~~y~-~-~f---~~P~~~~~~~~Ysfd~G~v~--fi~LDT- 465 (639)
..+ ... +.++||||+++.... .... . ...++. . .. ..+....-..|-.++.++++ ||.+.+
T Consensus 91 n~l--g~D-~~tlGNHEfd~G~~~l~~~~~--~----~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~ 161 (579)
T 3ztv_A 91 NAG--NFH-YFTLGNHEFDAGNEGLLKLLE--P----LKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTV 161 (579)
T ss_dssp HHH--TCS-EEECCSGGGTTHHHHHHHHHT--T----CCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECS
T ss_pred Hhc--CcC-eeeccccccccCHHHHHHHHH--h----cCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcC
Confidence 333 333 467999998642100 0000 0 000000 0 00 00000001246677888854 556643
Q ss_pred C-----CCCCC---CHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHh-CCCeEEEeCc
Q 006591 466 E-----HDWWL---NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLK-NKVDLVLFGH 536 (639)
Q Consensus 466 ~-----~~~~~---g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~-y~VdlvlsGH 536 (639)
. ..... -....+-+++.+++........+|+++|.+... +. .+.++ -+||++|+||
T Consensus 162 ~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d~-------~la~~~~giDlIlgGH 226 (579)
T 3ztv_A 162 NKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------NI-------EIAQKVNDIDVIVTGD 226 (579)
T ss_dssp HHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------HH-------HHHHHCSSCCEEEECS
T ss_pred CccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCCEEEeCC
Confidence 1 00000 012233455555544334466799999977411 11 22222 3799999999
Q ss_pred ccccc
Q 006591 537 VHNYE 541 (639)
Q Consensus 537 ~H~Ye 541 (639)
.|...
T Consensus 227 tH~~~ 231 (579)
T 3ztv_A 227 SHYLY 231 (579)
T ss_dssp SCCEE
T ss_pred CCccc
Confidence 99865
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00033 Score=71.55 Aligned_cols=175 Identities=13% Similarity=0.093 Sum_probs=89.7
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCce
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
.+|++++||++.. ||. ..+...++++++ .++|+++..||.+..+ +.. ....+.+..+ .+-+
T Consensus 4 ~m~ilf~GDv~G~-----------~G~-~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~Da 66 (281)
T 1t71_A 4 SIKFIFLGDVYGK-----------AGR-NIIKNNLAQLKSKYQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVNY 66 (281)
T ss_dssp CCEEEEECEEBHH-----------HHH-HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCCE
T ss_pred eEEEEEECCcCCh-----------HHH-HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCCE
Confidence 5899999999832 232 233334444433 3689999999998543 332 2222333322 3443
Q ss_pred EEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC----CCCCeEEEEeCCEEE--EEEeCCCCCC--CCHHHH
Q 006591 405 MTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS----KDRPWYSIEQASVHF--TVISTEHDWW--LNSEQY 476 (639)
Q Consensus 405 ~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~----~~~~~Ysfd~G~v~f--i~LDT~~~~~--~g~~Q~ 476 (639)
.++||||+++.. ..+..-+. . ...-...| |... .++.|.-++.+++++ |.+-+...+. .-..-.
T Consensus 67 -~TlGNHefD~g~--~~~~~l~~--~-~~v~~aN~--p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf 138 (281)
T 1t71_A 67 -ITMGNHTWFQKL--DLAVVINK--K-DLVRPLNL--DTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPF 138 (281)
T ss_dssp -EECCTTTTCCGG--GHHHHTTC--T-TEECBSCB--CTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHH
T ss_pred -EEEccCcccCCc--cHHHHhhh--c-CEEeeccC--CcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHH
Confidence 567999997530 00000000 0 00000011 1111 234677788887554 5444432122 112224
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+-+++.++ +.+...+|+.+|.-. ..+ .+.+.. .-.-+||+++.||.|...
T Consensus 139 ~~a~~~v~---~~~~diIIv~~H~g~----------t~E-k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 139 KVLKELIL---KRDCDLHIVDFHAET----------TSE-KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHT---TCCCSEEEEEEECSC----------HHH-HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHh---hcCCCEEEEEeCCCc----------hHH-HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 44555555 346778999999521 111 122222 123469999999999854
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00016 Score=76.11 Aligned_cols=55 Identities=15% Similarity=0.133 Sum_probs=33.0
Q ss_pred ceEEEEEecCCCCCCCC--CCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCcccc
Q 006591 327 EMKFLAYGDMGKAPRDA--STEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYA 381 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~ 381 (639)
.++|+..+|+|..-... ........+....+..+++++++..++ ++|..||++..
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qG 68 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQG 68 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCS
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCC
Confidence 58999999999653211 000011223345566666666655555 67789999943
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00028 Score=79.16 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=44.1
Q ss_pred CceEEEEEecCCCCCCCCCCc-ccc-CcChHHHHHHHHHHh-hcCCCc-EEEEcCCccccCCcHH----HHHHHHHhhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTE-HYI-QPGSLSVVKAMSDEV-NNGNVD-SVFHIGDISYATGFLV----EWDFFLHQITP 397 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~-~~~-~pg~~~~~~~l~~~i-~~~~pD-fVl~~GDl~y~~g~~~----~wd~f~~~l~~ 397 (639)
..++|+.++|+|........+ .+. .-|....+...+++. ++.+++ +++.+||++....... ..+...+.|..
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~ 93 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIK 93 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTT
T ss_pred eEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHh
Confidence 479999999999753221100 011 011122222233332 235678 5799999995432111 11122233332
Q ss_pred hhcCCceEEecCCCCcCC
Q 006591 398 VASRVSYMTAIGNHERDY 415 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~ 415 (639)
+ ..- +.++||||+++
T Consensus 94 l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 94 Q--DYD-LLTIGNHELYL 108 (557)
T ss_dssp S--CCS-EECCCGGGSSS
T ss_pred c--CCC-EEeecchhccc
Confidence 2 333 56789999974
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00034 Score=73.58 Aligned_cols=56 Identities=9% Similarity=0.112 Sum_probs=35.0
Q ss_pred CceEEEEEecCCCCCCCC--CCccccCcChHHHHHHHHHHhhcCCCc-EEEEcCCcccc
Q 006591 326 DEMKFLAYGDMGKAPRDA--STEHYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYA 381 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~--~~~~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~ 381 (639)
-.++|+..+|+|..-... ........+....+..+++++++..++ ++|..||++..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 368999999999643211 000011223456667777777666665 77899999943
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00086 Score=74.81 Aligned_cols=185 Identities=18% Similarity=0.191 Sum_probs=90.0
Q ss_pred ceEEEEEecCCCCCCCCC--Cc----cccCcChHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHH--HHHHHHhhhh
Q 006591 327 EMKFLAYGDMGKAPRDAS--TE----HYIQPGSLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVE--WDFFLHQITP 397 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~--~~----~~~~pg~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~--wd~f~~~l~~ 397 (639)
.++|+..+|+|..-.... .. ....-|....+..+++++++.+++ ++|..||++........ .+...+.|..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 479999999995432110 00 000112344556666666555555 77789999954321111 1122222222
Q ss_pred hhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCC-------------CCCCCeEEEEeCCEE--EEE
Q 006591 398 VASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTP-------------SKDRPWYSIEQASVH--FTV 462 (639)
Q Consensus 398 l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~-------------~~~~~~Ysfd~G~v~--fi~ 462 (639)
+ . .=..++||||+++.... .. .. .-.+ ..|++-.. ..-..|--++.++++ ||.
T Consensus 83 l--g-yDa~~lGNHEFd~G~~~-l~-~~-~~~~------a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviG 150 (530)
T 4h1s_A 83 L--R-YDAMALGNHEFDNGVEG-LI-EP-LLKE------AKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 150 (530)
T ss_dssp T--T-CCEEECCGGGGTTTTHH-HH-TT-TTTT------CSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEE
T ss_pred c--C-CCEEEEchhhhccCHHH-HH-HH-HHhh------CCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecc
Confidence 2 1 22568999999752110 00 00 0000 01111000 001346778888855 555
Q ss_pred EeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCe
Q 006591 463 ISTEHD-----------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVD 530 (639)
Q Consensus 463 LDT~~~-----------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~Vd 530 (639)
+-+..- +...-+..+...+.|++ .+..-+|++.|.... .+ ..+.++. +||
T Consensus 151 ltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------~d-------~~la~~v~giD 212 (530)
T 4h1s_A 151 YTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------MD-------KLIAQKVRGVD 212 (530)
T ss_dssp EECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH-------HHHHHHSTTCC
T ss_pred ccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------HH-------HHHHhcCCCCC
Confidence 554320 01112223333344543 356679999996421 11 1233343 799
Q ss_pred EEEeCcccccc
Q 006591 531 LVLFGHVHNYE 541 (639)
Q Consensus 531 lvlsGH~H~Ye 541 (639)
++|.||.|.+-
T Consensus 213 ~IlgGHsH~~~ 223 (530)
T 4h1s_A 213 VVVGGHSNTFL 223 (530)
T ss_dssp EEECCSSCCCB
T ss_pred eeccCCcccee
Confidence 99999999754
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0011 Score=66.65 Aligned_cols=172 Identities=17% Similarity=0.220 Sum_probs=89.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCcccc-CCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYA-TGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~-~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+|++++||.=. .|| ...++.+++++++.. |+++..|..+.. .+.. +...+.|..+ .+-++
T Consensus 1 m~ilfiGDi~g-----------~~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~~--G~D~~- 61 (252)
T 2z06_A 1 MRVLFIGDVMA-----------EPG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLREA--GVDLV- 61 (252)
T ss_dssp CEEEEECCBCH-----------HHH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHHH--TCCEE-
T ss_pred CEEEEEEecCC-----------ccc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHhC--CCCEE-
Confidence 58999999632 123 245666666766666 988887666533 3333 2222333322 45555
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEe--CCCCCCCCHHHHHHHHHHHh
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVIS--TEHDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LD--T~~~~~~g~~Q~~WL~~~La 484 (639)
+.||||++... ....-+. ... -.--++|.....+.|.-++.++.++-+++ .......-..-.+-+++.++
T Consensus 62 T~GNHefD~~~---l~~~l~~----~~~-vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~ 133 (252)
T 2z06_A 62 SLGNHAWDHKE---VYALLES----EPV-VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLE 133 (252)
T ss_dssp ECCTTTTSCTT---HHHHHHH----SSE-ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHH
T ss_pred EeccEeeECch---HHHHhcc----CCc-eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHH
Confidence 67999997421 0000000 000 00011222222456888999887766655 33211111112333555666
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
+.. .+.+|+.+|--. ..+ .+.+.. .-.-+||+++.||+|...
T Consensus 134 ~lk---~d~IIv~~H~g~----------tse-k~~la~-~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 134 EEK---ADYVLVEVHAEA----------TSE-KMALAH-YLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp HCC---CSEEEEEEECSC----------HHH-HHHHHH-HHBTTBSEEEEESSCSCB
T ss_pred HhC---CCEEEEEeCCCc----------HHH-HHHHHH-hCCCCeEEEEcCCCCcCC
Confidence 542 677999999532 111 122222 234579999999999844
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0016 Score=65.55 Aligned_cols=174 Identities=14% Similarity=0.072 Sum_probs=89.4
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-CcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-GFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+|++++||.=. ++| ...++.+++++++.. |+++..|+.+..+ +... ...+.+..+ .+-+ .
T Consensus 1 m~ilf~GDv~g-----------~~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~Da-~ 61 (255)
T 1t70_A 1 MRVLFIGDVFG-----------QPG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAGC-L 61 (255)
T ss_dssp CEEEEECCBBH-----------HHH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCSE-E
T ss_pred CEEEEEeccCC-----------hHH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCCE-E
Confidence 58999999641 122 345566666766655 9999988887543 3322 222333222 4444 4
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCC-CCCCCCCeEEEEeCCEEE--EEEeCCCCCCCCHHHHHHHHHHH
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMP-TPSKDRPWYSIEQASVHF--TVISTEHDWWLNSEQYKWIQKDL 483 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P-~~~~~~~~Ysfd~G~v~f--i~LDT~~~~~~g~~Q~~WL~~~L 483 (639)
++||||+++.. ....-+. ...... .--+.| ....++.|.-++.++.++ +.|-+......-..-.+-+++.+
T Consensus 62 TlGNHefD~~~---l~~~l~~--~~~~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v 135 (255)
T 1t70_A 62 TLGNHAWHHKD---IYPMLSE--DTYPIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALL 135 (255)
T ss_dssp ECCTTTTSSTT---HHHHHHT--TCSCEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHT
T ss_pred EeccccccCch---HHHHHhh--CCCcEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHH
Confidence 56999997421 0000000 000000 000112 222245677788887554 44444422111222234466666
Q ss_pred hhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 484 ASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 484 a~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
++. +...+|+.+|.-. ..+ .+.+.. .-+-+||+++.||.|...
T Consensus 136 ~~l---~~d~IIv~~H~e~----------t~E-k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 136 ERD---DLGTVFVDFHAEA----------TSE-KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TCS---SCCEEEEEEECSC----------HHH-HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHh---CCCEEEEEeCCCC----------hHH-HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 654 4677999999421 111 122222 223469999999999854
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00039 Score=68.20 Aligned_cols=68 Identities=21% Similarity=0.194 Sum_probs=47.5
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
...+++++||+|.. ...++++++.+.. .++|.++++||+++.+.... +.++.+. ..++
T Consensus 11 ~~~~i~visDiHg~--------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~---~~~~~l~----~~~~ 69 (221)
T 1g5b_A 11 KYRNIWVVGDLHGC--------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---ECLELIT----FPWF 69 (221)
T ss_dssp GCSCEEEECCCTTC--------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---HHHGGGG----STTE
T ss_pred CCceEEEEEcCCCC--------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH---HHHHHHh----cCCE
Confidence 35799999999932 3456777777654 37899999999996543321 2223222 3589
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 70 ~~v~GNhd~~ 79 (221)
T 1g5b_A 70 RAVRGNHEQM 79 (221)
T ss_dssp EECCCHHHHH
T ss_pred EEEccCcHHH
Confidence 9999999963
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00033 Score=70.98 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=46.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.+++++||+|.. ...++++++.+...++ |.++++||+++.+.... +.++.+.. .+++.
T Consensus 19 ~~i~visDiHg~--------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~---~~l~~l~~----~~~~~ 77 (262)
T 2qjc_A 19 GRVIIVGDIHGC--------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF---GVVRLLKR----LGAYS 77 (262)
T ss_dssp SCEEEECCCTTC--------------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH---HHHHHHHH----HTCEE
T ss_pred CeEEEEeCCCCC--------------HHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH---HHHHHHHH----CCCEE
Confidence 499999999932 3557777777765555 99999999996543322 23333332 37999
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 78 v~GNHd~~ 85 (262)
T 2qjc_A 78 VLGNHDAK 85 (262)
T ss_dssp CCCHHHHH
T ss_pred EeCcChHH
Confidence 99999973
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00062 Score=69.70 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=46.5
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
++++++||+|.. ...+.++++.+.. .++|.++++||+++.+.... +.++.+..+ ..+++.
T Consensus 1 M~i~vigDiHG~--------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 1 MATYLIGDVHGC--------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSL--GDSVRL 61 (280)
T ss_dssp -CEEEECCCCSC--------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHT--GGGEEE
T ss_pred CeEEEEecCCCC--------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhC--CCceEE
Confidence 478999999942 3556777777654 46899999999996543332 233333333 237999
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999963
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0089 Score=51.20 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=55.7
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
..|..+.+.......+++.|+|...... .-.|+|...+..... .+..... .+....
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~~----------------~~~~~~ 70 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID---DWIMETI----------------SGDRLT 70 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT---TSEEEEE----------------ETTCCE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc---ceEEEEE----------------CCCceE
Confidence 5677777766533468999999965432 126677643221100 0000000 011235
Q ss_pred EEecCCCCCcEEEEEEccCC----CccceeeEEECCCCCC
Q 006591 289 AVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGG 324 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g 324 (639)
++|++|+|+|.|.+||..-+ ..||....|+|.+.+.
T Consensus 71 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 71 HQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCC
Confidence 78999999999999996522 2478889999987654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.012 Score=50.04 Aligned_cols=88 Identities=18% Similarity=0.336 Sum_probs=53.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.. ...+++.|.|...... .-.|+|...+.... ..... .+...
T Consensus 11 P~~P~~l~~~~--~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~-~~~~~---------------------~~~~~ 66 (111)
T 1x5l_A 11 PSQVVVIRQER--AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQ-SYSTL---------------------KAVTT 66 (111)
T ss_dssp CCCCCCEECSC--BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCS-SCEEE---------------------EESSS
T ss_pred CCCCceEEEEE--cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCce-eEEEe---------------------cCCCC
Confidence 55565555443 3458999999865322 12667764332110 00000 01123
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGG 324 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g 324 (639)
..+|++|+|++.|.+||..-+ ..||....|+|++.++
T Consensus 67 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 107 (111)
T 1x5l_A 67 RATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSG 107 (111)
T ss_dssp EEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCC
Confidence 578999999999999996521 2488899999987654
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.027 Score=48.55 Aligned_cols=88 Identities=18% Similarity=0.231 Sum_probs=54.1
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCC-CC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGD-KE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~-~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.|..|..+++... ..+++.|.|.... .. .-.|+|...+...+. .... . . +.
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~---~~~~------~---~---------~~ 73 (120)
T 1x5f_A 17 LPSAPRDVVASLV--STRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER---VENT------S---H---------PG 73 (120)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE---EEEC------S---S---------TT
T ss_pred CCCCCCCcEEEec--CCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce---EEEe------c---c---------CC
Confidence 3667777766554 3578999999654 21 136777654322110 0000 0 0 01
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
...++|++|+|+|.|.+||..-+ . .||....|+|.+.
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 23578999999999999997522 1 4788889999754
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.023 Score=50.10 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=54.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
|..|..+++.... .+++.|+|...... .-.|+|...+.... ..... +
T Consensus 19 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~-~~~~~------------~--------- 74 (123)
T 2edd_A 19 MLPPVGVQAVALT--HDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASA-KYKSE------------D--------- 74 (123)
T ss_dssp SCCCEEEEEEEEE--TTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTC-CCCCE------------E---------
T ss_pred CCCCcceEEEEcC--CCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCc-cEEEE------------e---------
Confidence 5577777765543 58999999954321 23677775432100 00000 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
.....++|+||+|+|.|.++|..- ...||....|+|.+.
T Consensus 75 ~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 012367999999999999999653 235899999999865
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.003 Score=66.44 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=46.2
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--------CCCcEEEEcCCccccCCcHHHHHHHHHhhhh-
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--------GNVDSVFHIGDISYATGFLVEWDFFLHQITP- 397 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--------~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~- 397 (639)
..+++++||+|.. ...+.++++.+.. .++|.++++||+++.+....+--.++..++.
T Consensus 70 ~~~i~vigDiHG~--------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~ 135 (342)
T 2z72_A 70 IKKVVALSDVHGQ--------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQ 135 (342)
T ss_dssp CCEEEEECCCTTC--------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC--------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHH
Confidence 4799999999942 3456666665431 1579999999999754433221112222211
Q ss_pred -hhcCCceEEecCCCCcC
Q 006591 398 -VASRVSYMTAIGNHERD 414 (639)
Q Consensus 398 -l~~~vP~~~v~GNHD~~ 414 (639)
.....+++.+.||||..
T Consensus 136 ~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 136 ARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHTTCEEEECCCHHHHH
T ss_pred HhhCCCeEEEEecCCcHH
Confidence 12345799999999973
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0049 Score=63.82 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=46.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 405 (639)
.+++++||+|. ....+.++++.+.....+.++++||+++.+....+ .+..+..+. ..-.++
T Consensus 50 ~~i~viGDIHG--------------~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 112 (309)
T 2ie4_C 50 CPVTVCGDVHG--------------QFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERIT 112 (309)
T ss_dssp SSEEEECCCTT--------------CHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEE
T ss_pred CCEEEEecCCC--------------CHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEE
Confidence 57999999994 24556677776655667888999999965443322 223332221 133589
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 113 ~lrGNHE~~ 121 (309)
T 2ie4_C 113 ILRGNHESR 121 (309)
T ss_dssp ECCCTTSST
T ss_pred EEeCCCCHH
Confidence 999999974
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.02 Score=48.54 Aligned_cols=87 Identities=21% Similarity=0.283 Sum_probs=52.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... ..+++.|.|....... -.|+|...+..... .... .+...
T Consensus 8 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~---------------------~~~~~ 63 (108)
T 2djs_A 8 PSTVPIMHQVSA--TMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN-SSMA---------------------RSQTN 63 (108)
T ss_dssp CCCCSCCEEEEE--CSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTT-CEEE---------------------EESSS
T ss_pred CCCCcceEEEec--CCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcc-eeEE---------------------ecCcc
Confidence 556666666543 3579999998654322 25566543321110 0000 01113
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
.++|+||+|+|.|.+||..-+ ..||....|+|.+..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 578999999999999997521 247888999998754
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.013 Score=50.03 Aligned_cols=88 Identities=15% Similarity=0.224 Sum_probs=53.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|.|...... .-.|+|...+........... . .. .
T Consensus 8 P~~p~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~------------~-------~~--~ 64 (109)
T 2e7h_A 8 PPAVSDIRVTRSS--PSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLK------------T-------SE--N 64 (109)
T ss_dssp SCCCCCCEEEEEE--TTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEE------------E-------SS--S
T ss_pred CCCCCccEEEecC--CCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEc------------c-------CC--C
Confidence 5566666666543 47999999865322 126777644311110000000 0 01 1
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
.++|+||+|+|.|.+||..-+ ..||....|+|.+.+
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 678999999999999997522 248888999998754
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0075 Score=62.99 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=46.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhh--hcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPV--ASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l--~~~vP~~ 405 (639)
.+++++||+|. ....+.++++.+.....|-++++||+++.+....+ .+..+..+ ...-.++
T Consensus 57 ~~i~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 57 APLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFF 119 (330)
T ss_dssp SSEEEECBCTT--------------CHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEE
T ss_pred CceEEecCCCC--------------CHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceE
Confidence 36999999994 34567777777655567889999999975443322 22322222 1234589
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999963
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.044 Score=46.44 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=53.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.......+++.|+|....... -.|+|...+...+.. .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~------~~--------~----------~~~ 63 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWAS------QR--------A----------ASN 63 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEE------EE--------E----------SSS
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEE------ec--------C----------Ccc
Confidence 567777766653334689999999654322 256665433211110 00 0 001
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
.++|++|+|+|.|.+||..-+ ..||....|+|.+
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 64 FTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 578999999999999996522 2478888999854
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.064 Score=45.98 Aligned_cols=90 Identities=16% Similarity=0.238 Sum_probs=53.0
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC--C----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK--E----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~--~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
..|..++.... ..+++.|+|..... . . -.|+|...+..... .+.... . .+-.
T Consensus 10 ~~P~~~~~~~~--~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~---~~~~~~----~------------~~~~ 68 (114)
T 1x4y_A 10 AGPYITFTDAV--NETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDS---DYKKDM----V------------EGDR 68 (114)
T ss_dssp SCCEEEEEECS--SSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGG---GCCCEE----E------------ETTC
T ss_pred CCCeEEEEEec--CCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCc---ceeeEe----c------------CCcE
Confidence 45665555543 35899999996531 1 1 26777643321000 000000 0 0111
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAGG 324 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~~g 324 (639)
..++|++|+|+|.|.++|..- ...+|....|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 357899999999999999642 23588889999976543
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.013 Score=60.83 Aligned_cols=74 Identities=19% Similarity=0.146 Sum_probs=44.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
...+++++||+|.. ...+.++++.+... ..+.++++||+++.+....+--.++..++. ...-.+
T Consensus 58 ~~~ri~viGDIHG~--------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~-~~p~~v 122 (315)
T 3h63_A 58 ETEKITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKL-LYPDHF 122 (315)
T ss_dssp TTCEEEEECCCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHH-HSTTTE
T ss_pred CCceEEEEecCCCC--------------HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhh-hcCCcE
Confidence 35799999999943 44566666665433 234699999999754433221112222211 123358
Q ss_pred EEecCCCCcC
Q 006591 405 MTAIGNHERD 414 (639)
Q Consensus 405 ~~v~GNHD~~ 414 (639)
+.+.||||..
T Consensus 123 ~~lrGNHE~~ 132 (315)
T 3h63_A 123 HLLRGNHETD 132 (315)
T ss_dssp EEECCTTSSH
T ss_pred EEEecCcccc
Confidence 8999999963
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.056 Score=45.22 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=52.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|..+.+.... .++++|.|...... .-.|+|...+... .+..- . . ......
T Consensus 8 P~~P~~~~~~~~~--~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~-----~~~~~---~-----~---------~~~~~~ 63 (106)
T 2dju_A 8 PKPPIDLVVTETT--ATSVTLTWDSGNSEPVTYYGIQYRAAGTEG-----PFQEV---D-----G---------VATTRY 63 (106)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECCCSSCCSEEEEEEEETTCCS-----CCCCB---C-----C---------CCSSEE
T ss_pred CcCCCCcEEEecc--CCEEEEEEcCCCCCCceEEEEEEEECCCCC-----CeEEc---c-----C---------CCccEE
Confidence 5567766665543 47999999965322 2367776433211 01100 0 0 011246
Q ss_pred EecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
+|++|+|++.|.|||..-+ ..+|....++|.+.
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 64 SIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCC
Confidence 8899999999999997522 24778888998764
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.011 Score=60.68 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=45.6
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
+++++||+|. ....+.++.+.+.....+-++++||+++.+....+--.++-.++ +...-.++.+.
T Consensus 57 ~i~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk-~~~p~~v~~lr 121 (299)
T 3e7a_A 57 PLKICGDIHG--------------QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYK-IKYPENFFLLR 121 (299)
T ss_dssp SEEEECBCTT--------------CHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHH-HHSTTTEEECC
T ss_pred CEEEEecCCC--------------CHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHH-hhCCCcEEEEe
Confidence 6999999994 34567777777665667889999999976544322111111111 11234589999
Q ss_pred CCCCc
Q 006591 409 GNHER 413 (639)
Q Consensus 409 GNHD~ 413 (639)
||||.
T Consensus 122 GNHE~ 126 (299)
T 3e7a_A 122 GNHEC 126 (299)
T ss_dssp CTTSS
T ss_pred cCchh
Confidence 99996
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.016 Score=49.18 Aligned_cols=88 Identities=16% Similarity=0.271 Sum_probs=52.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.... .+ +.|+|..... .. -.|+|...+...+... ...... .+-.
T Consensus 7 P~~P~~~~~~~~~--~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~-~~~~~~-----------------~~~~ 65 (105)
T 2haz_A 7 PSSPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKE-----------------ASME 65 (105)
T ss_dssp CCCCEEEEEEECS--SC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE-EEEHHH-----------------HHHH
T ss_pred CcCCCCCEEEEcC--Cc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc-eEEccc-----------------cCCc
Confidence 5567666665543 34 9999996532 11 2677875443212110 000000 0111
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..++|+||+|+|.|.+||..-+ ..+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 3578999999999999996521 2478888999986
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.016 Score=60.57 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=45.6
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCce
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVASRVSY 404 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~ 404 (639)
+..+++++||+|. ....+.++.+.+..... +.++++||+++.+....+--.++..++. ...-.+
T Consensus 62 ~~~ri~viGDIHG--------------~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~-~~p~~v 126 (335)
T 3icf_A 62 PDVKISVCGDTHG--------------QFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKI-LHPNNF 126 (335)
T ss_dssp TTCEEEEECCCTT--------------CHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHH-HCTTTE
T ss_pred cCceEEEEecCCC--------------CHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhh-hCCCcE
Confidence 4689999999994 34556667776644333 4699999999654433221112222211 123458
Q ss_pred EEecCCCCc
Q 006591 405 MTAIGNHER 413 (639)
Q Consensus 405 ~~v~GNHD~ 413 (639)
+.+.||||.
T Consensus 127 ~llrGNHE~ 135 (335)
T 3icf_A 127 FLNRGNHES 135 (335)
T ss_dssp EECCCTTSS
T ss_pred EEecCchhh
Confidence 999999995
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.072 Score=57.97 Aligned_cols=139 Identities=17% Similarity=0.226 Sum_probs=78.2
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----------cCCCcEEEEcCCccccCCcH---------
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----------NGNVDSVFHIGDISYATGFL--------- 385 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----------~~~pDfVl~~GDl~y~~g~~--------- 385 (639)
.+..+++++|+|.+.... .....++.+.+.+. ..++.-+|++||.+...+..
T Consensus 199 ~~~~ialVSGL~igs~~~--------~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y 270 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG--------ESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKY 270 (476)
T ss_dssp SCCEEEEECCCCBTSSCH--------HHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------
T ss_pred CCCEEEEECCcccCCCcc--------cchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhc
Confidence 457999999999875421 00122333333221 25788999999999654220
Q ss_pred ----------HHHHHHHHhhhhhhcCCceEEecCCCCcCCCCCCCccCCCCCCCccccccc-cccCCCC-----CCCCCC
Q 006591 386 ----------VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE-TYFPMPT-----PSKDRP 449 (639)
Q Consensus 386 ----------~~wd~f~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~-~~f~~P~-----~~~~~~ 449 (639)
.+.+.+-+.+..+...+|+...|||||-.. +..|.. ++. ..|+... ..-.+.
T Consensus 271 ~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~------~~lPQq------plh~~lfp~s~~~~~~~~vtNP 338 (476)
T 3e0j_A 271 LTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTN------YTLPQQ------PLHPCMFPLATAYSTLQLVTNP 338 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSC------SSSSCC------CCCTTSCHHHHTSTTEEECCSS
T ss_pred cccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccc------ccCCCC------CcCHHHhhhhhhcCccEEeCCC
Confidence 233455556666778999999999999631 111211 111 1111000 001223
Q ss_pred eEEEEeCCEEEEEEeCCC-----CCCCCHHHHHHHHHHHhh
Q 006591 450 WYSIEQASVHFTVISTEH-----DWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 450 ~Ysfd~G~v~fi~LDT~~-----~~~~g~~Q~~WL~~~La~ 485 (639)
|.|++++++|++..... .+...+.-++.|+..|+-
T Consensus 339 -~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 339 -YQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp -EEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred -eEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 46999999999875431 012233456788888874
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.034 Score=47.80 Aligned_cols=87 Identities=17% Similarity=0.240 Sum_probs=53.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|.|....... -.|+|...+...... ... . . ....
T Consensus 18 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~---~~~------~---~---------~~~~ 74 (119)
T 2ed7_A 18 PSAPRDVVPVLVS--SRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERA---LNT------T---Q---------PGSL 74 (119)
T ss_dssp CCCCSCCEEEEEC--SSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEE---EEC------C---C---------TTCC
T ss_pred CcCCcceEEEecC--CCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCccee---eEe------e---c---------CCce
Confidence 6677777766543 579999998654322 256665433221100 000 0 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..+|++|+|++.|.+||..- ...+|....++|.+.
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 75 QLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 57899999999999998642 124788888998764
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.058 Score=46.09 Aligned_cols=37 Identities=32% Similarity=0.486 Sum_probs=30.3
Q ss_pred EEecCCCCCcEEEEEEccCC----CccceeeEEECCCCCCC
Q 006591 289 AVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGGS 325 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g~ 325 (639)
++|+||+|+|.|.+||...+ ..||....|+|.+.+++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999997522 35888899999887553
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.03 Score=48.51 Aligned_cols=86 Identities=15% Similarity=0.227 Sum_probs=53.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
|..|..++..... .+++.|+|.-.... .-.|+|..... ... .+... .
T Consensus 9 p~~P~~l~~~~~s--~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~-~~~---~~~~~------------------~ 64 (113)
T 1x5j_A 9 MMPPVGVQASILS--HDTIRITWADNSLPKHQKITDSRYYTVRWKTNIP-ANT---KYKNA------------------N 64 (113)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSS-SSC---CCEEC------------------C
T ss_pred CCCCcceEEEEec--CCEEEEEecCCCCccccccCcCceEEEEEEECCC-CCe---EEEEE------------------e
Confidence 4567777776543 58999999854321 23567764211 000 00000 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
+....++|+||+|+|.|.++|..- ...||....++|.+.
T Consensus 65 ~~~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 65 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp BCSSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCcCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 112368999999999999999752 125888889999765
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.016 Score=61.00 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=45.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~vP~~ 405 (639)
.+++++||+|.. ...+.++.+.......+-++++||+++.+....+ .+..+..+. ..-.++
T Consensus 70 ~pi~ViGDIHG~--------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~E---vl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 70 APVTVCGDIHGQ--------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLF 132 (357)
T ss_dssp SSEEEECCCTTC--------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEE
T ss_pred ccceeeccCCCC--------------HHHHHHHHHhcCCCCCcEEEECCCccCCCcChHH---HHHHHHHhhhhcCCcEE
Confidence 369999999943 4556667776655667889999999965433322 122222221 233589
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999963
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.05 Score=46.36 Aligned_cols=86 Identities=21% Similarity=0.286 Sum_probs=51.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|..+++... ..+++.|+|...... .-.|+|...+.... ..... +.....
T Consensus 18 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~-------~~~~~----------------~~~~~~ 72 (115)
T 1x5z_A 18 PGQPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEE-------QRITI----------------EPGTSY 72 (115)
T ss_dssp CCCCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCC-------BCCEE----------------CSSSEE
T ss_pred CCCCccCEeeeC--CCCEEEEEEcCCCCCCccEEEEEEEeCCCCCc-------eEEec----------------CCCcEE
Confidence 556766666543 458999999965432 12555553322111 00000 001357
Q ss_pred EecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
+|+||+|+|.|.+||..-+ ..||....|+|.+..
T Consensus 73 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 73 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp EEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred EECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 8999999999999997522 247788899997653
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.099 Score=44.28 Aligned_cols=88 Identities=18% Similarity=0.153 Sum_probs=49.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++.- -+.+++.|+|.-.... .-.|+|...+...... .... + +-...++
T Consensus 3 p~~P~~l~v~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~--~~~v----------~---------~~~~~~~ 59 (104)
T 2rb8_A 3 LDAPSQIEVKD--VTDTTALITWMPPSQPVDGFELTYGIKDVPGDRT--TIDL----------T---------EDENQYS 59 (104)
T ss_dssp CCCCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE--EEEE----------E---------TTCCEEE
T ss_pred CCCCCccEEEE--ecCCeEEEEEcCCCCccceEEEEEEECcCCCceE--EEEc----------C---------CCcCEEE
Confidence 55676666654 3468999999865432 1267776432111100 0000 0 1113578
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAG 323 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~ 323 (639)
|+||+|||+|.++|..- +.+.| ....|+|.+..
T Consensus 60 l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 60 IGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC--
T ss_pred eCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCc
Confidence 99999999999999642 22222 34568887654
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.021 Score=62.57 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=45.4
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCC-CcEEEEcCCccccCCcHHHHHHHHHhhhh--hhcCC
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGN-VDSVFHIGDISYATGFLVEWDFFLHQITP--VASRV 402 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~-pDfVl~~GDl~y~~g~~~~wd~f~~~l~~--l~~~v 402 (639)
...+++++||+|.. ...+.++++.+.... .|.++++||+++.+....+ .+..+.. +....
T Consensus 211 ~~~~~~vigDiHG~--------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e---~~~~l~~l~~~~~~ 273 (477)
T 1wao_1 211 ETEKITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE---VILTLFGFKLLYPD 273 (477)
T ss_dssp SSCEEEEECBCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH---HHHHHHHHHHHSTT
T ss_pred CCcceEEEeCCCCC--------------HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHH---HHHHHHHHHhhCCC
Confidence 35799999999942 345666766654333 3569999999965433322 2222221 12245
Q ss_pred ceEEecCCCCc
Q 006591 403 SYMTAIGNHER 413 (639)
Q Consensus 403 P~~~v~GNHD~ 413 (639)
.++.+.||||.
T Consensus 274 ~~~~lrGNHE~ 284 (477)
T 1wao_1 274 HFHLLRGNHET 284 (477)
T ss_dssp TEEEECCTTSS
T ss_pred ceEeecCCccH
Confidence 78999999995
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.058 Score=47.20 Aligned_cols=87 Identities=20% Similarity=0.280 Sum_probs=50.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC-CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK-EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|...... .+.++++|+|..+.. .. -.|+|...+...+-..... | +...
T Consensus 9 P~pP~~~~~~---~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~------------~---------~~~~ 64 (114)
T 2kbg_A 9 PSPPSIHGQP---SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKV------------Q---------GNKD 64 (114)
T ss_dssp CCSCCEECCB---CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEE------------E---------TTTC
T ss_pred ccCCcccccc---cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEc------------C---------CCcC
Confidence 5555433322 356899999986432 22 2788876533222111000 1 1112
Q ss_pred EEEecCCCCCcEEEEEEccC-CCccce--eeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~ 323 (639)
.++|.||+|++.|.+||... ..|.|+ ...|+|.+..
T Consensus 65 ~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 65 HIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp CEEECCCCTTCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 47899999999999999753 334443 4678886543
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.60 E-value=0.094 Score=44.39 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=27.4
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
..++++|+|++.|.|||..-+ . .+|....++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 568899999999999997533 2 3677788888764
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.11 Score=43.25 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=48.4
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|..+.+.... .+++.|+|...... .-.|+|.............. + +....++|
T Consensus 3 ~~P~~l~v~~~~--~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~~------------~---------~~~~~~~i 59 (98)
T 3teu_A 3 DAPTDLQVTNVT--DTSITVSWTPPSATITGYRITYTPSNGPGEPKELTV------------P---------PSSTSVTI 59 (98)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEEEE------------C---------TTCSEEEE
T ss_pred CCCCceEEEEec--CCEEEEEEeCCCCcccEEEEEEEECCCCCceEEEEc------------C---------CCcCEEEe
Confidence 356666655433 47899999976432 23677874322111111110 0 11135789
Q ss_pred cCCCCCcEEEEEEccC-CCccceeeEEECC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSDKIQFRTP 320 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~~~~F~T~ 320 (639)
+||+|+|.|.++|..- ..+.|+..++...
T Consensus 60 ~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~ 89 (98)
T 3teu_A 60 TGLTPGVEYVVSVYALKDNQESPPLVGTQT 89 (98)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCEEEEEE
T ss_pred cCCCCCCEEEEEEEEEeCCCCCCCeEEEec
Confidence 9999999999999752 3356665555543
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.56 E-value=0.069 Score=45.63 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=52.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|+|...... .-.|+|...+..... ... ....
T Consensus 18 P~~P~~l~~~~~~--~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~---~~~---------------------~~~~ 71 (116)
T 1x5g_A 18 PGPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ---DVD---------------------VSSH 71 (116)
T ss_dssp CCCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC---CEE---------------------ECSS
T ss_pred CcCCCccEEEecC--CCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE---EEe---------------------cCCc
Confidence 5567666666543 47999999865321 126677644322110 000 0113
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..+|+||+|+|.|.+||..- ...+|....|+|.+.
T Consensus 72 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 57899999999999999652 124788888999764
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.064 Score=45.61 Aligned_cols=87 Identities=23% Similarity=0.313 Sum_probs=51.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC--CC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD--KE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.. ....+++.|.|.... .. .-.|+|...+...+... +. +..
T Consensus 9 P~~P~~~~~~~-~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~--~~---------------------~~~ 64 (110)
T 2crz_A 9 PGPCLPPRLQG-RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV--YQ---------------------GSE 64 (110)
T ss_dssp CCCCCCCEECS-CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE--EE---------------------ESC
T ss_pred CCCCCCceecc-ccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE--Ee---------------------CCc
Confidence 55666666632 123579999996432 21 13677764332212111 00 011
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
...++++|+|++.|.+||..-+ ..||....++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 2567899999999999997522 247888889887643
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.13 Score=43.17 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=52.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|+|...... .-.|+|...+..... .... . ..
T Consensus 8 P~~P~~l~~~~~~--~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~---~~~~----------~-----------~~ 61 (106)
T 2ed8_A 8 PGPVENLQAVSTS--PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ---NIEV----------D-----------GL 61 (106)
T ss_dssp CCCCEEEEEECSS--TTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE---EEEE----------C-----------SS
T ss_pred CcCCceeEEEecC--CCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE---EEeC----------C-----------cc
Confidence 5677777666543 57999999965321 126777644322110 0000 0 02
Q ss_pred EEEecCCCCCcEEEEEEccCCC----ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEAV----DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~~----~~S~~~~F~T~P~ 322 (639)
.++|++|+|+|.|.+||..-+. .+|....|+|.+.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 62 SYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp CEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 4689999999999999975321 3677888998654
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.53 E-value=0.14 Score=43.72 Aligned_cols=87 Identities=15% Similarity=0.095 Sum_probs=53.3
Q ss_pred cCCCCCceeEEeeccCCCCceEEEEEeCCC--------CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccC
Q 006591 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDK--------EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHN 282 (639)
Q Consensus 211 ~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--------~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~ 282 (639)
.-|..|..+++.......+++.|+|..... ..-.|+|...+........ +.
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~--------------~~------- 64 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE--------------LS------- 64 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE--------------ES-------
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEe--------------cc-------
Confidence 346778777777644345799999996542 1247888755432111000 00
Q ss_pred CceEEEEEecCCCCCcEEEEEEccCC---C---ccceeeEEECC
Q 006591 283 PGYIHTAVMTGLQPSSTVSYRYGSEA---V---DWSDKIQFRTP 320 (639)
Q Consensus 283 ~g~~h~a~l~gL~P~t~Y~Yrvg~~~---~---~~S~~~~F~T~ 320 (639)
....+.|.+|+|||.|..||.... . .||....++|.
T Consensus 65 --~~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~~ 106 (109)
T 1uc6_A 65 --NGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATPW 106 (109)
T ss_dssp --SCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECCC
T ss_pred --cCCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeeec
Confidence 012568899999999999998642 1 36666666653
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.074 Score=46.50 Aligned_cols=88 Identities=23% Similarity=0.266 Sum_probs=52.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.... .+++.|+|....... -.|+|...+.... .+..... .+...
T Consensus 28 P~~P~~l~~~~~~--~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~----------------~~~~~ 85 (130)
T 1wfo_A 28 PGPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTAN----TATVEVL----------------APSAR 85 (130)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCS----CCCEEEE----------------CTTCC
T ss_pred CCCCCceEEEecC--CCEEEEEEcCCCCCCCceEEEEEEEEECCCCCc----eEEEEEe----------------CCCce
Confidence 5567666666543 479999998653321 2666664332110 0000000 11224
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
..+|++|+|+|.|.+||..-+ . .+|....|+|.+.
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 86 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 678999999999999997532 2 3677788998754
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.15 Score=56.75 Aligned_cols=122 Identities=15% Similarity=0.151 Sum_probs=64.9
Q ss_pred EEEEEEeeeccc--eEEEEeecC---Cccceeeeccccccc-cCCCCCceeEEeeccCCCCceEEEEEeCCCC-----Cc
Q 006591 175 SIIFHVINIRTD--IEFVFFAGG---FATPCILSRTQPVNF-ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQ 243 (639)
Q Consensus 175 ~~~~~l~n~r~~--~~f~~f~~g---~~~~~~~a~s~~v~~-~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~ 243 (639)
..++.|-+++.. |.|.+.+.. ...| -..+..+.+ ..+..|..+.+.. ...++++|+|...... .-
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~~~--~s~tSV~LsW~pP~~~ng~I~~Y 474 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRLEG--RSTTSLSVSWSIPPPQQSRVWKY 474 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEEEE--CCC-CCEEEEECCTTTTTTCSEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCceee--ccCCeEEEEEECCcCCCCcccEE
Confidence 334555565544 677665532 1111 011122222 2345566665532 3468999999965322 12
Q ss_pred EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCC----CccceeeEEEC
Q 006591 244 QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRT 319 (639)
Q Consensus 244 ~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T 319 (639)
.|+|...+.. . ...... +....++|+||+|+|.|.++|..-+ ..||+...|+|
T Consensus 475 ~V~y~~~~~~-~-~~~~v~---------------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T 531 (536)
T 3fl7_A 475 EVTYRKKGDS-N-SYNVRR---------------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQT 531 (536)
T ss_dssp EEEEEEC--C-C-CCEEEE---------------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEEC
T ss_pred EEEEEECCCC-c-eEEEEc---------------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEe
Confidence 6777744322 0 000000 0112578999999999999997522 24888999999
Q ss_pred CCCC
Q 006591 320 PPAG 323 (639)
Q Consensus 320 ~P~~ 323 (639)
.+..
T Consensus 532 ~~~~ 535 (536)
T 3fl7_A 532 LSPE 535 (536)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8754
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.46 E-value=0.092 Score=45.08 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=53.5
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--C-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--E-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+++... ..+++.|+|..... . .-.|+|...+..... .+.... ...++...
T Consensus 18 ~P~~~~~~~~--~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~---~~~~~~--------------~~~~~~~~ 78 (122)
T 1va9_A 18 PPMDVTLQPV--TSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNG---QYSIVE--------------MKATGDSE 78 (122)
T ss_dssp CCEEEEEEEC--SSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCC---SCBCCB--------------CCCCSSEE
T ss_pred CCcceEEEec--cCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCc---ceEEEE--------------EecCCcee
Confidence 5666666543 35899999996543 1 126777644321110 000000 00123456
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
.++|+||+|+|.|.++|..-+ ..+|....|+|.+.
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 79 VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 789999999999999997421 24788888988754
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.36 E-value=0.029 Score=61.58 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=44.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
.+++++||+|. ....+.++++.......+-++++||+++.+....+--.++..++. ...-.++.+
T Consensus 83 ~pI~VIGDIHG--------------q~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~-~~P~~v~lL 147 (521)
T 1aui_A 83 APVTVCGDIHG--------------QFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKI-LYPKTLFLL 147 (521)
T ss_dssp SSEEEECCCTT--------------CHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHH-HSTTTEEEC
T ss_pred cceeeccCCCC--------------CHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhh-hCCCeEEEe
Confidence 46999999994 245566666644344568899999999654433221122222211 123358999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||..
T Consensus 148 RGNHE~~ 154 (521)
T 1aui_A 148 RGNHECR 154 (521)
T ss_dssp CCTTSSH
T ss_pred cCCccHH
Confidence 9999963
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.1 Score=44.79 Aligned_cols=86 Identities=17% Similarity=0.340 Sum_probs=50.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-Cc----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-PQ----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~~----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.... .+++.|.|...... .. .|+|...+.. ..|.... . +...
T Consensus 18 P~~P~~~~~~~~~--~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-----~~~~~~~-~----------------~~~~ 73 (118)
T 1x3d_A 18 PDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN-----GEFCQCY-M----------------GSQK 73 (118)
T ss_dssp CCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSS-----SCCEEEE-E----------------ESCS
T ss_pred CcCCCCcEEeccC--CCEEEEEECCCCCCCCcceEEEEEEecCCCC-----CCeEEee-c----------------cCCc
Confidence 5566666655443 47999999865432 22 4555532221 0111000 0 0012
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++++|+|++.|.|||..-+ ..+|....|+|.+.
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 468899999999999996421 24777888888754
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.20 E-value=0.11 Score=45.75 Aligned_cols=94 Identities=14% Similarity=0.224 Sum_probs=51.8
Q ss_pred CCCCCc-eeEEeeccCCCCceEEEEEeCCCC--Cc-EEEEecCC-CcccceeeeeeccccccCCCCCCCCCCCccCC--c
Q 006591 212 NPKKPL-YGHLSSVDSTGTSMRLTWVSGDKE--PQ-QVEYGDDG-KTQTSEVSTFTQENMCSSALPSPAKDFGWHNP--G 284 (639)
Q Consensus 212 ~~~~P~-~~~l~~~~~~~~sm~v~W~T~~~~--~~-~V~yg~~g-~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~--g 284 (639)
.|..|. .+++... +.++++|.|...... .. .|+|.... ...... .+... ..|..- .
T Consensus 15 ~P~~P~~~~~~~~~--~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~--~~~~~-------------~~w~~~~~~ 77 (127)
T 2dmk_A 15 APNPPSIREELCTA--SHDTITVHWISDDEFSISSYELQYTIFTGQANFIS--LYNSV-------------DSWMIVPNI 77 (127)
T ss_dssp SCCCCEEEEEEEEE--ETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHH--HHHTG-------------GGSEEEEEE
T ss_pred CCcCCCCCCEEEee--eCCEEEEEECCCCCCCccceEEEEEEecccccccc--cccCC-------------CCcEEeecc
Confidence 477787 5555544 357999999976532 23 67776311 100000 00000 001100 0
Q ss_pred eEEEEEecCCCCCcEEEEEEccC---CCccceeeEEECCCC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTPPA 322 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~P~ 322 (639)
.-...+++||+|+++|.|||..- +..+|....++|++.
T Consensus 78 ~~~~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 78 KQNHYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp CSSEEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred cCCeEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 01145789999999999999642 224677788888753
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.20 E-value=0.072 Score=45.15 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=28.5
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
..+|+||+|+|.|.+||..-+ ..||....|+|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 568899999999999997522 247888999997653
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.22 Score=42.60 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=49.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..++..- .+.+++.|+|....... -.|+|...+. ..... . -.
T Consensus 7 ~Ps~v~~l~v~~--~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~-------~~~~~----------~---------~~ 58 (104)
T 2dle_A 7 GAIQVFDVTAVN--ISATSLTLIWKVSDNESSSNYTYKIHVAGETD-------SSNLN----------V---------SE 58 (104)
T ss_dssp SCCBEEEEEEEE--ECSSCEEEEEEESCSTTCCSCEEEEEEECSSC-------EEEEE----------E---------SS
T ss_pred CCCCCceEEEEE--eecCEEEEEEcCCCCCCCceEEEEEEEECCCC-------eEEEc----------C---------CC
Confidence 355565555544 34689999999653321 3566653211 00000 0 01
Q ss_pred EEEEecCCCCCcEEEEEEccCCC---ccceeeEEECCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEAV---DWSDKIQFRTPPAG 323 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~~---~~S~~~~F~T~P~~ 323 (639)
..++|+||+|||.|.++|..... +-+....+.|.|.+
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCS
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCC
Confidence 26899999999999999975321 22345667787654
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.091 Score=45.06 Aligned_cols=36 Identities=22% Similarity=0.148 Sum_probs=28.2
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..++|++|+|+|.|.+||..- ...+|....|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 357899999999999999642 124788889999754
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.04 E-value=0.076 Score=46.33 Aligned_cols=89 Identities=16% Similarity=0.267 Sum_probs=50.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.... .+ +.|+|.-... .. -.|+|...+...+.. .+..... . +..
T Consensus 8 P~~P~~~~~~~~~--~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~--~~~~~~~-------~---------~~~ 66 (122)
T 2e3v_A 8 PSSPSIDQVEPYS--ST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS--KWYDAKE-------A---------SME 66 (122)
T ss_dssp CCCCEEEEEEECS--SC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEE--EEEEHHH-------H---------HTT
T ss_pred CcCCCccEEEecC--Cc-EEEEECCCCcCCCCcceEEEEEEEECCCCCccc--ceeeeee-------c---------Ccc
Confidence 5567666665533 34 9999995432 22 256676544322211 0000000 0 011
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++|++|+|+|+|.+||..-+ ..+|....|+|.|.
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 2578999999999999997522 24777888887664
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.01 E-value=0.043 Score=47.09 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=28.0
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~ 323 (639)
..+++||+|++.|.|||..-+ ..||+...|+|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCC
Confidence 367899999999999996522 247788889997654
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.95 E-value=0.16 Score=42.59 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=46.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+.+... +.+++.|+|.-.... .-.|+|...+......... .++-...++
T Consensus 2 p~~P~~l~~~~~--~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~~---------------------~~~~~t~~~ 58 (100)
T 3b83_A 2 LQPPFNIKVTNI--TLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVD---------------------LTSSITSLT 58 (100)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEEE---------------------ECTTEEEEE
T ss_pred CccCCccEEEEe--cCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEEE---------------------ECCcceEEE
Confidence 456766666543 458999999865432 2367776433211100000 012234678
Q ss_pred ecCCCCCcEEEEEEccC-CCcccee
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWSDK 314 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S~~ 314 (639)
|+||+|+|+|.++|... ..++|+.
T Consensus 59 i~~L~p~t~Y~~~V~A~n~~g~s~p 83 (100)
T 3b83_A 59 LTNLEPNTTYEIRIVARNGQQYSPP 83 (100)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCC
T ss_pred ECCCCCCCEEEEEEEEEeCCCCCCC
Confidence 99999999999999753 2344443
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.039 Score=46.02 Aligned_cols=34 Identities=32% Similarity=0.363 Sum_probs=26.4
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..+|+||+|+|.|.++|..-+ ..||....|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 458899999999999996421 2477778888865
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.22 Score=41.73 Aligned_cols=68 Identities=25% Similarity=0.354 Sum_probs=39.9
Q ss_pred CceeEEeeccCCCCceEEEEEeCCCCC--cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecC
Q 006591 216 PLYGHLSSVDSTGTSMRLTWVSGDKEP--QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTG 293 (639)
Q Consensus 216 P~~~~l~~~~~~~~sm~v~W~T~~~~~--~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~g 293 (639)
|..+.+. .-+.++++|+|....... -.|+|...+.......... + +-.-.++|+|
T Consensus 5 P~~l~v~--~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~~------------~---------~~~t~~~l~g 61 (98)
T 3tes_A 5 PKNLVVS--EVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINLTV------------P---------GSERSYDLTG 61 (98)
T ss_dssp CEEEEEE--SCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEEEE------------E---------TTCSEEEECS
T ss_pred CCceEEE--ecCCCeEEEEecCCcCccceEEEEEEECCCCCceEEEEc------------C---------CCcCEEEECC
Confidence 4444443 445689999999655422 2677875432111000000 0 0112578999
Q ss_pred CCCCcEEEEEEcc
Q 006591 294 LQPSSTVSYRYGS 306 (639)
Q Consensus 294 L~P~t~Y~Yrvg~ 306 (639)
|+|+|.|.++|..
T Consensus 62 L~P~t~Y~~~V~A 74 (98)
T 3tes_A 62 LKPGTEYTVSIYG 74 (98)
T ss_dssp CCTTCEEEEEEEE
T ss_pred CCCCCEEEEEEEE
Confidence 9999999999875
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.21 Score=42.87 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=51.4
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--C-CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--E-PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~-~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+++.... .+++.|+|..... . .-.|+|...+..... ...... + +....++|
T Consensus 21 ~P~~l~~~~~~--~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~-~~~~~~----------~---------~~~~~~~i 78 (119)
T 2ee2_A 21 APTEVGVKVLS--SSEISVHWEHVLEKIVESYQIRYWAAHDKEEA-ANRVQV----------T---------SQEYSARL 78 (119)
T ss_dssp CCCSCEEEEEE--TTEEEEECCCCSCTTCCEEEEEEEESSSCGGG-CEEEEE----------E---------TTCSEEEE
T ss_pred CCCcEEEEEcc--CCEEEEEecCCCCCccceEEEEEEECCCcccC-cEEEEc----------C---------CCEeEEEE
Confidence 45455555433 4799999986543 1 226777643321110 000000 0 11136789
Q ss_pred cCCCCCcEEEEEEccC----CCccceeeEEECCCCC
Q 006591 292 TGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAG 323 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~~ 323 (639)
+||+|+|.|.+||..- ...+|....|+|.+.+
T Consensus 79 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 79 ENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAS 114 (119)
T ss_dssp CSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCC
T ss_pred CCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCC
Confidence 9999999999999652 2247888899997654
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.84 Score=42.97 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=41.7
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.... .+++.|+|...... .-.|+|...+.......... + +-....+|
T Consensus 116 ~P~~l~~~~~~--~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~i 172 (203)
T 2gee_A 116 PPTDLRFTNIG--PDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSI------------S---------PSDNAVVL 172 (203)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEEEE------------C---------TTCCEEEE
T ss_pred CCCceEEEEcC--CCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEEEc------------C---------CCcCEEEE
Confidence 67666654433 47999999976432 23677775332211110000 0 11235789
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+|+|.|.++|..
T Consensus 173 ~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 173 TNLLPGTEYVVSVSS 187 (203)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999975
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.81 E-value=0.47 Score=43.73 Aligned_cols=86 Identities=17% Similarity=0.102 Sum_probs=48.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++.. ...+++.|.|.-.... .-.|+|...+.... ...... +.....+
T Consensus 95 p~~P~~l~~~~--~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~-~~~~~~---------------------~~~~~~~ 150 (186)
T 1qr4_A 95 VGSPKGISFSD--ITENSATVSWTPPRSRVDSYRVSYVPITGGTP-NVVTVD---------------------GSKTRTK 150 (186)
T ss_dssp CCCCSCEEEES--CCSSCEEEEECCCSSCCSEEEEEEEETTCCCC-EEEEEE---------------------TTCCEEE
T ss_pred CCCCCccEEEE--eCCCEEEEEEECCCCcccEEEEEEEeCCCCCc-eEEEcC---------------------CCcCEEE
Confidence 56776665543 3458999999864332 23677764432111 100100 1113578
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPA 322 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~ 322 (639)
|+||+|++.|.++|... +.+.| ....|+|.|.
T Consensus 151 i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 151 LVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred EcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 99999999999999752 22334 3456778764
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.78 E-value=0.3 Score=40.75 Aligned_cols=83 Identities=19% Similarity=0.349 Sum_probs=47.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|. ..+... ..+++.|.|....... -.|+|...+...+... .. + +...
T Consensus 8 P~~p~-~~v~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-~~------------~---------~~~~ 62 (107)
T 2dn7_A 8 PGRPT-MMISTT--AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-DF------------G---------KDDQ 62 (107)
T ss_dssp CCCCE-EEEEEC--STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-EE------------E---------TTCC
T ss_pred CCCCc-EeEEec--CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-Ee------------C---------CCcc
Confidence 45565 455544 4689999999653221 2677764432211100 00 0 1113
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~~F~T~P 321 (639)
..+|++|+|+|.|.+||..- ..+ +|. ..|+|.+
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 57899999999999999752 223 444 4577754
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.23 Score=43.30 Aligned_cols=36 Identities=14% Similarity=0.041 Sum_probs=27.8
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..++|+||+|+|.|.+||..- ...+|....|+|.+.
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 467899999999999999642 124788888998654
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.2 Score=47.66 Aligned_cols=89 Identities=15% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCCCCceeEEeeccC----CCCceEEEEEeCCC--C---CcEEEEe-cCCCcccceeeeeeccccccCCCCCCCCCCCcc
Q 006591 212 NPKKPLYGHLSSVDS----TGTSMRLTWVSGDK--E---PQQVEYG-DDGKTQTSEVSTFTQENMCSSALPSPAKDFGWH 281 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~----~~~sm~v~W~T~~~--~---~~~V~yg-~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~ 281 (639)
.|..|..+.+....+ ..+++.|+|..... . .-.|+|. ..+...+......
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~-------------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL-------------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE--------------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEecc--------------------
Confidence 466787665554311 35789999986532 1 2367776 4433222111000
Q ss_pred CCceEEEEEecCCCCCcEEEEEEccC---CC----ccceeeEEECCC
Q 006591 282 NPGYIHTAVMTGLQPSSTVSYRYGSE---AV----DWSDKIQFRTPP 321 (639)
Q Consensus 282 ~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~~----~~S~~~~F~T~P 321 (639)
.+......|.+|+|+|+|..||... +. .||....|+|+.
T Consensus 168 -~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 -PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp -ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred -cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 0123467899999999999999752 11 378888999864
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.2 Score=42.25 Aligned_cols=88 Identities=20% Similarity=0.248 Sum_probs=49.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
+..|..+++.-.. .+++.|+|.-..... -.|+|...+.......... . -++. .++|
T Consensus 9 ~~~P~~l~~~~~~--~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~~~---------------~----~~~~--~~~l 65 (104)
T 2dkm_A 9 LPPPRALTLAAVT--PRTVHLTWQPSAGATHYLVRCSPASPKGEEEEREV---------------Q----VGRP--EVLL 65 (104)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSSCSEEEEEEEESSSCCSSCCEEE---------------E----ESSS--EEEE
T ss_pred CCCCceeEEEecC--CCEEEEEEeCCCCCCeEEEEEEECCCCCCcceEEE---------------e----cCCC--EEEE
Confidence 4467666666543 589999997543322 2566653322110000000 0 0112 6899
Q ss_pred cCCCCCcEEEEEEccC-CCccce--eeEEECCCCC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAG 323 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~ 323 (639)
+||+|+|+|.++|..- +.+.|. ...++|.|.+
T Consensus 66 ~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 66 DGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp ESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCS
T ss_pred CCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCC
Confidence 9999999999999753 233343 3456676543
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.18 Score=51.23 Aligned_cols=89 Identities=16% Similarity=0.299 Sum_probs=53.1
Q ss_pred CCCCceeEEeeccC----CCCceEEEEEeCCC--C---CcEEEEe-cCCCcccceeeeeeccccccCCCCCCCCCCCccC
Q 006591 213 PKKPLYGHLSSVDS----TGTSMRLTWVSGDK--E---PQQVEYG-DDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHN 282 (639)
Q Consensus 213 ~~~P~~~~l~~~~~----~~~sm~v~W~T~~~--~---~~~V~yg-~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~ 282 (639)
|..|..+++....+ ..+++.|+|..... . .-.|+|. ..+...+......
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~--------------------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL--------------------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE---------------------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc---------------------
Confidence 66776555444321 35799999996432 1 2367777 4433222111000
Q ss_pred CceEEEEEecCCCCCcEEEEEEccC---CC----ccceeeEEECCCC
Q 006591 283 PGYIHTAVMTGLQPSSTVSYRYGSE---AV----DWSDKIQFRTPPA 322 (639)
Q Consensus 283 ~g~~h~a~l~gL~P~t~Y~Yrvg~~---~~----~~S~~~~F~T~P~ 322 (639)
++..+...|.+|+|+|+|..||... +. .||....|+|+..
T Consensus 262 ~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 1123567899999999999999742 12 3778888998753
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.4 Score=41.05 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=49.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++.. .+.+++.|+|.-.... .-.|+|...+... ..... + +-...+
T Consensus 7 ~p~~P~~l~~~~--~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~----~~~~v----------~---------~~~t~~ 61 (115)
T 2cuh_A 7 GPDGPTQLRALN--LTEGFAVLHWKPPQNPVDTYDIQVTAPGAPP----LQAET----------P---------GSAVDY 61 (115)
T ss_dssp CCSSCEEEECCC--CSSSCEEEEEECCSSCCSEEEEEEECSSSCC----EEEEE----------E---------TTCSEE
T ss_pred CCCCCcceEEEe--ccCCeEEEEEECCCCCccEEEEEEEcCCCCc----EEEEE----------C---------CCccEE
Confidence 356776555443 3468999999864332 2367776432211 01100 0 111267
Q ss_pred EecCCCCCcEEEEEEccCC-Cc--cceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA-VD--WSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~-~~--~S~~~~F~T~P~ 322 (639)
+|+||+|+|+|.++|..-+ .+ -.....|+|.+.
T Consensus 62 ~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 62 PLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 8999999999999996521 12 223466888754
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=94.46 E-value=0.12 Score=49.05 Aligned_cols=92 Identities=16% Similarity=0.294 Sum_probs=53.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++.......+++.|+|...... .-.|+|...+...+... ...+. .+..
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~---~~~~~----------------~~~~ 163 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI---PPEDT----------------ASTR 163 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC---CGGGG----------------CSCC
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEe---ccccc----------------cCcc
Confidence 366777777665433458999999954321 13677765432211100 00000 0112
Q ss_pred EEEEecCCCCCcEEEEEEccC---C-C---ccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---A-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~-~---~~S~~~~F~T~P~ 322 (639)
...+|++|+|+|.|.+||... + . .||....|+|.+.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 164 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp SEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 357899999999999999752 1 1 2677788888653
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.64 Score=43.74 Aligned_cols=125 Identities=14% Similarity=0.142 Sum_probs=65.5
Q ss_pred eeEEEEEEeeeccc--eEEEEeec---CCccce---e-eeccccccccCCCCCceeEEeeccCCCCceEEEEEeCC--C-
Q 006591 173 GGSIIFHVINIRTD--IEFVFFAG---GFATPC---I-LSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGD--K- 240 (639)
Q Consensus 173 ~g~~~~~l~n~r~~--~~f~~f~~---g~~~~~---~-~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~--~- 240 (639)
.....+.+-+++.. |.|.+.+. |...+. . +.......-..+..|..+... ....+++.|+|.... .
T Consensus 67 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~--~~~~~sv~l~W~~p~~~~~ 144 (214)
T 2ibg_A 67 GKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE--EYSETAVVLHWSLASDADE 144 (214)
T ss_dssp EEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCB--CCSSSCEEEEEECCTTCCG
T ss_pred CcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEE--EccCCeEEEEEeCCCccCC
Confidence 34566777777755 67766553 321111 1 000011111123345444333 334579999999753 1
Q ss_pred --C-CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCC----Cccc
Q 006591 241 --E-PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEA----VDWS 312 (639)
Q Consensus 241 --~-~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S 312 (639)
. .-.|+|...+. ..+... .. . + ......+|+||+|++.|.|||..-+ ..+|
T Consensus 145 ~~i~~Y~v~~~~~~~~~~~~~~-~~--~---------~---------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 203 (214)
T 2ibg_A 145 HLITGYYAYYRPSSSAGEYFKA-TI--E---------G---------AHARSFKIAPLETATMYEFKLQSFSAASASEFS 203 (214)
T ss_dssp GGCCEEEEEEEETTCCSCCEEE-EE--E---------C---------TTCCEEEECSCCTTCEEEEEEEEECSSCBCCCC
T ss_pred CCcceEEEEEEECCCCcceEEe-ec--c---------C---------CcceEEEeCCCCCCCEEEEEEEEEcCCccCCCc
Confidence 1 12677764433 111110 00 0 0 0112468899999999999997521 2477
Q ss_pred eeeEEECC
Q 006591 313 DKIQFRTP 320 (639)
Q Consensus 313 ~~~~F~T~ 320 (639)
....++|.
T Consensus 204 ~~~~~~T~ 211 (214)
T 2ibg_A 204 ALKQGRTQ 211 (214)
T ss_dssp CCEEEECC
T ss_pred ceEeeEec
Confidence 88888885
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.092 Score=53.02 Aligned_cols=91 Identities=16% Similarity=0.307 Sum_probs=55.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++.......+++.|+|...... .-.|+|...+...+... ...+. ++..
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~---~~~~~----------------~~~~ 259 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQI---PPEDT----------------ASTR 259 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEEC---CGGGG----------------CSCC
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEE---ccccC----------------CCce
Confidence 466787777765433568999999965431 12777875543222110 00000 0112
Q ss_pred EEEEecCCCCCcEEEEEEccC---C----CccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---A----VDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~----~~~S~~~~F~T~P 321 (639)
...+|++|+|+|.|.+||... + ..||+...|+|+.
T Consensus 260 ~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 260 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 357899999999999999752 1 1367888999964
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.38 E-value=0.16 Score=43.89 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--CC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--EP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+++.... .+++.|+|..... .. -.|+|...+..... .. . + +...
T Consensus 31 ~P~~l~~~~~~--~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~--~~-----~-------~---------~~~~ 85 (124)
T 2ed9_A 31 PPQNVSLEVVN--SRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM--ET-----L-------E---------PNNL 85 (124)
T ss_dssp CCBSCCEEEEE--TTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE--EE-----E-------C---------SSCS
T ss_pred CCeeeEEEEcC--CCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce--EE-----e-------c---------CCcC
Confidence 46556655443 4799999986543 11 26677644322110 00 0 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..+|++|+|+|.|.++|..-+ ..||....|+|+.
T Consensus 86 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 86 WYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 578999999999999997421 2478888999864
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.33 E-value=3.1 Score=41.04 Aligned_cols=99 Identities=19% Similarity=0.216 Sum_probs=55.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-C-CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-E-PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~-~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.+..|..+.+... ..++++|.|..... . .-.|+|...+.... ..... + +.....
T Consensus 112 ~~~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~~~~------------~---------~~~~~~ 167 (290)
T 3r8q_A 112 NVSPPRRARVTDA--TETTITISWRTKTETITGFQVDAVPANGQTP-IQRTI------------K---------PDVRSY 167 (290)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSCCCCEEEEEEEESSSCCC-EEEEE------------C---------TTCSEE
T ss_pred CCCCCceeEEEEc--CCCeEEEEEeCCCCcccEEEEEEEECCCCcc-eEEec------------C---------CCccEE
Confidence 3456766666643 35799999997543 2 23677764332111 00000 0 011246
Q ss_pred EecCCCCCcEEEEEEccC-CCccce--eeEEECCCCCCCCceEEEEEec
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~g~~~~~f~v~gD 335 (639)
+++||+|++.|.++|..- ..+.|. ...+.|.|.+ +..+++...++
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~-P~~l~~~~~~~ 215 (290)
T 3r8q_A 168 TITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDA-PSNLRFLATTP 215 (290)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEEEEEET
T ss_pred EECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCC-CCccEEEeeCC
Confidence 899999999999999642 223333 3456676543 23566655544
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.22 Score=42.85 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=49.0
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|..+++.- -+.+++.|+|...... .-.|+|...+....... . + + +-...+.|
T Consensus 9 ~pP~~l~~~~--vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~-~---------v---~---------~~~t~~~l 64 (108)
T 2ee3_A 9 APPRHLGFSD--VSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQT-E---------A---P---------GNATSAML 64 (108)
T ss_dssp CCSSCEEEES--CCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCE-E---------E---E---------TTCCEEEE
T ss_pred CCCceEEEEE--ccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEE-E---------c---C---------CCcCEEEc
Confidence 4566666654 3568999999854332 22777864322111000 0 0 1 11236789
Q ss_pred cCCCCCcEEEEEEcc-CCCccce--eeEEECCCC
Q 006591 292 TGLQPSSTVSYRYGS-EAVDWSD--KIQFRTPPA 322 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~-~~~~~S~--~~~F~T~P~ 322 (639)
+||+|+|.|..+|.. .+.+-|. ...|+|.+.
T Consensus 65 ~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~v 98 (108)
T 2ee3_A 65 GPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKA 98 (108)
T ss_dssp CSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCC
Confidence 999999999999864 2233332 235888643
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.22 Score=42.06 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=41.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+... ..++++|+|..... .. -.|+|...+...+ .. +.. .+ ...
T Consensus 8 P~~P~~l~~~~~--~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w------~~---~~~---~~---------~~~ 64 (110)
T 2yuw_A 8 TSPPTLLTVDSV--TDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDW------IV---ANK---DL---------IDK 64 (110)
T ss_dssp SCCCEEEEEEEE--CSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSE------EE---CCS---SC---------CCS
T ss_pred CCCCCccEEEec--cCCeEEEEECCCCCCCCCCccEEEEEEEECCCccc------eE---ecc---cc---------Ccc
Confidence 556766655543 35799999996432 22 2566664432211 11 100 01 111
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...++++|+|++.|.|||..
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A 84 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKA 84 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEE
Confidence 25678999999999999975
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.19 E-value=0.14 Score=43.66 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=48.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC-C---C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK-E---P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~---~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+... ..+++.|.|..... . . -.|+|...+... .+..-.. .. ...
T Consensus 16 P~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~-----~~~~~~~-------~~---------~~~ 72 (117)
T 1uem_A 16 PGPPSKPQVTDV--TKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSN-----SWQTVAN-------HV---------KTT 72 (117)
T ss_dssp CBCCCCCEEEEE--CSSCEEEECCCCBCSSSCCCEEEEEEEETTTEE-----EEEEEEE-------EE---------CSS
T ss_pred ccCCCCCEEEEe--cCCEEEEEEeCCCCCCcCceEEEEEEEECCCCC-----ceeEccc-------cc---------CcC
Confidence 556766666543 35799999985532 1 1 366776432111 1111000 00 011
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceeeE-EECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKIQ-FRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~~-F~T~P~ 322 (639)
..++++|+|++.|.|||..- ..+ +|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 46889999999999999753 222 444443 777654
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=94.18 E-value=0.28 Score=42.42 Aligned_cols=71 Identities=28% Similarity=0.492 Sum_probs=42.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+.+.-. +.+++.|+|...... .-.|+|...+...... .... + +....++
T Consensus 4 P~~P~~L~v~~~--t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~--~~~v----------~---------~~~ts~~ 60 (114)
T 3qwq_B 4 SDVPRDLEVVAA--TPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ--EFTV----------P---------GPVHTAT 60 (114)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE--EEEE----------E---------TTCCEEE
T ss_pred CCCCCceEEEec--CCCEEEEEEcCCcCcccEEEEEEEECCCCCccE--EEEe----------C---------CCcCEEE
Confidence 567766666554 357999999975432 2377887543321001 1100 1 1123688
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
|+||+|+|.|..+|..
T Consensus 61 l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 61 ISGLKPGVDYTITVYA 76 (114)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEE
Confidence 9999999999999864
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.16 E-value=0.13 Score=44.93 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=28.3
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
...+|++|+|+|.|.++|..-+ ..||....|+|.+.
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 4678999999999999987522 24788889999763
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=94.13 E-value=0.27 Score=50.77 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=26.6
Q ss_pred EEEEecCCCCCcEEEEEEccCC-Cc---cceeeEEECCCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-VD---WSDKIQFRTPPAG 323 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-~~---~S~~~~F~T~P~~ 323 (639)
...+|++|+|++.|.+||..-+ .| +|. ..|+|+|.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTV-YEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-EEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-eEecCCCCC
Confidence 3578999999999999997522 22 444 479998765
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.25 Score=43.37 Aligned_cols=36 Identities=19% Similarity=0.120 Sum_probs=28.5
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..++|+||+|+|.|..+|..- ...+|....|+|+..
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 467999999999999999642 234788889999754
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.11 E-value=0.43 Score=41.37 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=28.7
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~~ 323 (639)
.++|++|+|++.|.+||..- ...||....|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 46789999999999999642 2248899999998653
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=94.08 E-value=0.41 Score=40.26 Aligned_cols=84 Identities=15% Similarity=0.254 Sum_probs=48.0
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--C----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--E----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+.+.... .+++.|+|..... . . -.|.|...+....+. +..... . +-..
T Consensus 7 ~P~~~~~~~~s--~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~---~~~~~v-------~---------~~~~ 65 (102)
T 3n1f_C 7 GPHIAYTEAVS--DTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD---YKRDVV-------E---------GSKQ 65 (102)
T ss_dssp CCEEEEEEECS--SSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG---CEEEEE-------E---------TTCS
T ss_pred CCceeEEEEcC--CCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc---eEEEEE-------c---------CCce
Confidence 56666665543 4799999986532 1 1 278887544321010 000000 0 0012
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEEC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRT 319 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T 319 (639)
.++|++|+|+|.|..+|..- ....|....++|
T Consensus 66 ~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 66 WHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred EEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 46899999999999999642 123566777776
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.07 E-value=0.15 Score=43.57 Aligned_cols=72 Identities=21% Similarity=0.261 Sum_probs=42.1
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..|..+++... ..+++.|+|....... -.|+|...+...+. ..... + +...
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~---~~~~~---------~---------~~~~ 73 (118)
T 2yrz_A 17 VPDTPTRLVFSAL--GPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELH---RLNIP---------N---------PAQT 73 (118)
T ss_dssp CCCCCCCCEECCC--BTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEE---EEEES---------C---------TTCC
T ss_pred CCCCCCceEEEeC--CCCEEEEEeCCCCCCCCccEEEEEEEECCCCceE---EEEcC---------C---------CCcC
Confidence 3566766665543 3579999998654432 25666543321111 00000 0 1113
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.++|++|+|++.|.+||..
T Consensus 74 ~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 74 SVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp EEEEESCCTTCEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 5788999999999999975
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.06 E-value=4.7 Score=39.39 Aligned_cols=102 Identities=19% Similarity=0.182 Sum_probs=57.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++... ..++++|.|...... .-.|+|...+..... ..... . +.+-....
T Consensus 104 ~p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~-~~~~~------------~------~~~~~~~~ 162 (283)
T 1tdq_A 104 EIDAPKNLRVGSR--TATSLDLEWDNSEAEAQEYKVVYSTLAGEQYH-EVLVP------------K------GIGPTTKT 162 (283)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSSCCSEEEEEEEETTCCCCE-EEEEE------------C------CSSSEEEE
T ss_pred CCCCCCceEEEec--CCCeEEEEecCCCCCccEEEEEEEeCCCCcce-EEECC------------C------CCcccceE
Confidence 3567766666543 357999999975432 237777644322110 00000 0 00114577
Q ss_pred EecCCCCCcEEEEEEccC-CCcccee--eEEECCCCCCCCceEEEEEec
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWSDK--IQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S~~--~~F~T~P~~g~~~~~f~v~gD 335 (639)
++++|+|++.|.++|..- +.+.|.. ..+.|.|.+ ...+++...++
T Consensus 163 ~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~-P~~l~~~~~~~ 210 (283)
T 1tdq_A 163 TLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDS-PRDLMVTASSE 210 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEEEEECS
T ss_pred EEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCC-CCccEEeEecC
Confidence 899999999999999752 2234433 445565542 24466655544
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.91 E-value=0.33 Score=41.82 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=49.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-C----CcEEEEecCC-CcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-E----PQQVEYGDDG-KTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~----~~~V~yg~~g-~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+... ..++++|.|.-... . .-.|+|...+ ...+..... . + + +.
T Consensus 17 ~P~~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~---~--~------~---------~~ 74 (121)
T 1x4z_A 17 PPEAPDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS---A--I------P---------PS 74 (121)
T ss_dssp CCCCCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE---E--E------C---------TT
T ss_pred CCccCCCCEEEEc--cCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec---c--c------C---------CC
Confidence 4667776666543 35799999984322 1 1267777543 111211100 0 0 0 11
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-C---ccceee-EEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-V---DWSDKI-QFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~-~F~T~P~ 322 (639)
....++++|+|++.|.|||..-+ . .+|... .+++.+.
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 23578999999999999997532 2 244433 3555443
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=93.90 E-value=0.3 Score=46.02 Aligned_cols=90 Identities=14% Similarity=0.265 Sum_probs=52.7
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCC--CCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGD--KEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.... .+++|+|.... ... -.|+|...+...+... .+.... .+.
T Consensus 8 ~P~~P~~~~~~~~~---~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~-~~~~~~-----------------~~~ 66 (209)
T 2vkw_A 8 TPSSPSIDQVEPYS---STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKE-----------------ASM 66 (209)
T ss_dssp CCCCCEEEEEEECS---SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEE-EEEHHH-----------------HHH
T ss_pred CCcCCcccEeeecc---CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEe-EeeccC-----------------CCc
Confidence 36678777766543 25899999653 111 2677775443222111 110000 011
Q ss_pred EEEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
....++++|+|+|.|.|||..-+ ..+|....|+|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 23578999999999999996421 23677778998764
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=93.89 E-value=0.27 Score=47.61 Aligned_cols=89 Identities=17% Similarity=0.284 Sum_probs=55.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+..|.-+++...+ .+++.|+|...... .-.|+|...+. .+........ ...
T Consensus 106 ~~pP~~l~~~~~~--~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~~~~~~-------------------~~~ 163 (214)
T 2b5i_B 106 LMAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEAPLLTL-------------------KQK 163 (214)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTSCCEEE-------------------CSC
T ss_pred CCCCceEEEEEec--CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chheeeeeee-------------------ccc
Confidence 4677777777644 36899999976532 23677765432 1111000000 011
Q ss_pred EEEEEecCCCCCcEEEEEEccC---C-----CccceeeEEECCCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE---A-----VDWSDKIQFRTPPAG 323 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~---~-----~~~S~~~~F~T~P~~ 323 (639)
.+.+.|.+|+|||+|..||... + ..||....|+|.|..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 2467889999999999999753 1 258888999998753
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.86 E-value=0.2 Score=45.30 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=28.8
Q ss_pred EEEecCCCCCcEEEEEEccC-C---CccceeeEEECCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-A---VDWSDKIQFRTPPAG 323 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~---~~~S~~~~F~T~P~~ 323 (639)
.++|+||+|+|.|..||..- + ..+|....|+|++..
T Consensus 83 s~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 68899999999999999642 1 247888899998653
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.86 E-value=0.42 Score=41.47 Aligned_cols=91 Identities=18% Similarity=0.134 Sum_probs=50.7
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecC---CCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDD---GKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~---g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
-|..|..+.+... ..++++|.|.-.... .-.|+|... +...+...... .. +
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~---~~----------------~ 75 (124)
T 1wis_A 17 LPGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL---SN----------------E 75 (124)
T ss_dssp CCCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE---ES----------------C
T ss_pred CCccCCCCEEEEe--cCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE---cc----------------C
Confidence 4667766665543 458999999754321 136777642 11111111000 00 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC-Cc---ccee-eEEECCCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA-VD---WSDK-IQFRTPPAG 323 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~-~~---~S~~-~~F~T~P~~ 323 (639)
+....+++++|+|++.|.+||..-+ .| +|.. ..++|.+..
T Consensus 76 ~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 76 PDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp TTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 1123578999999999999987532 23 4443 458886543
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.81 E-value=0.2 Score=42.92 Aligned_cols=35 Identities=20% Similarity=0.441 Sum_probs=24.6
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceee-EEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKI-QFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~-~F~T~P~ 322 (639)
..+++||+|++.|.|||..- ..+ +|... .++|++.
T Consensus 77 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 77 SVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 57899999999999999752 223 44443 4677654
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.79 E-value=0.25 Score=41.88 Aligned_cols=72 Identities=19% Similarity=0.265 Sum_probs=42.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC--CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK--EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+... ..++++|+|.-... .. -.|+|...+...+ .. |.. .+. .
T Consensus 8 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w------~~---~~~---~~~---------~ 64 (111)
T 1x5y_A 8 PTSAPQHLTVEDV--TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEW------VP---ANK---EPV---------E 64 (111)
T ss_dssp CCCCCEEEEEEEE--CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCC------EE---SSS---SCB---------S
T ss_pred CCcCCCCCEEEec--cCCEEEEEECCCCcCCCCcccEEEEEEEECCCCce------EE---ccc---cCC---------c
Confidence 3567766666543 35799999995432 11 2667764433211 10 110 011 1
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++++|+|++.|.|||..
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A 85 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVG 85 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEE
Confidence 235678999999999999975
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.70 E-value=0.11 Score=44.71 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=26.5
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++++|+|++.|.|||..-+ ..||....++|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 468899999999999997532 24677777888654
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.70 E-value=0.9 Score=38.21 Aligned_cols=84 Identities=21% Similarity=0.232 Sum_probs=49.2
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++... +.+++.|+|.-.... .-.|+|...+.. . ..... + +-...++
T Consensus 8 p~~P~~l~v~~~--~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~---~~~~~----------~---------~~~ts~~ 62 (105)
T 2cum_A 8 LEAPRDLEAKEV--TPRTALLTWTEPPVRPAGYLLSFHTPGGQ-T---QEILL----------P---------GGITSHQ 62 (105)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEECTTSC-E---EEEEE----------C---------SSCSEEE
T ss_pred CCCCCceEEEec--cCCEEEEEEcCCCCccceEEEEEEeCCCc-e---EEEEE----------C---------CCccEEE
Confidence 566766655543 468999999854432 126777643221 1 01100 0 1113678
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPP 321 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P 321 (639)
|+||+|+|.|.++|..- +.+.| ....|+|..
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred ECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCC
Confidence 99999999999999652 22223 446788854
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=93.64 E-value=0.51 Score=44.67 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=54.2
Q ss_pred CCCCCceeEEeecc--CCCCceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCc
Q 006591 212 NPKKPLYGHLSSVD--STGTSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGW 280 (639)
Q Consensus 212 ~~~~P~~~~l~~~~--~~~~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~ 280 (639)
.|..|..+.+.... ...+++.|+|...... .-.|+|...+...+... . .
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~--~-----~------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIH--F-----A------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEE--E-----E-------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEE--e-----c-------------
Confidence 36678777776543 2357999999965432 12667764433221100 0 0
Q ss_pred cCCceEEEEEecCCCCCcEEEEEEccC---C--CccceeeEEECCC
Q 006591 281 HNPGYIHTAVMTGLQPSSTVSYRYGSE---A--VDWSDKIQFRTPP 321 (639)
Q Consensus 281 ~~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~--~~~S~~~~F~T~P 321 (639)
+......|.+|+|+|.|..||... + ..||+...|+|+.
T Consensus 162 ---~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 ---GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp ---ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred ---cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 011256899999999999999742 1 2478889999964
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.51 E-value=0.5 Score=41.29 Aligned_cols=72 Identities=22% Similarity=0.343 Sum_probs=43.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++... +.+++.|+|.-.... .-.|+|...+.......... + +-...++
T Consensus 29 ~~~P~~l~v~~~--t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~~~v------------~---------~~~t~~~ 85 (121)
T 2ocf_D 29 SDVPTKLEVVAA--TPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTV------------P---------GSKSTAT 85 (121)
T ss_dssp CCSCEEEEEEEE--CSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEEEEE------------E---------TTCCEEE
T ss_pred CCCCCccEEEec--CCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEEEEe------------C---------CCcCEEE
Confidence 456776666654 357999999865432 23677764432110000000 0 1123678
Q ss_pred ecCCCCCcEEEEEEccC
Q 006591 291 MTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~ 307 (639)
|+||+|+|.|.++|..-
T Consensus 86 l~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 86 ISGLKPGVDYTITVYAV 102 (121)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEEE
Confidence 99999999999999753
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.47 E-value=0.62 Score=37.64 Aligned_cols=67 Identities=19% Similarity=0.350 Sum_probs=39.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
|..|..++.... ..+++.|+|...........|...-.. .... . . . + -..+++
T Consensus 4 P~~P~~l~~~~~--~~~sv~L~W~~~~~~~~i~~Y~v~~~~--~~~~--------~-~---~---------~--~~~~~~ 56 (88)
T 1k85_A 4 PTAPTNLASTAQ--TTSSITLSWTASTDNVGVTGYDVYNGT--ALAT--------T-V---T---------G--TTATIS 56 (88)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCSSEEEEEEEESS--SEEE--------E-E---S---------S--SEEEEC
T ss_pred cCCCCccEEEec--cCCEEEEEECCCCCCCCccEEEEEECC--EEEe--------e-c---C---------C--CEEEeC
Confidence 567766666553 357999999865433334444421000 0000 0 0 0 1 135789
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
+|+||+.|+|+|..
T Consensus 57 ~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 57 GLAADTSYTFTVKA 70 (88)
T ss_dssp CCCSSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999975
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.46 E-value=0.27 Score=42.35 Aligned_cols=19 Identities=16% Similarity=0.307 Sum_probs=16.9
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+++||+|++.|.|||..
T Consensus 69 ~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp EEEECSCCSSCCEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEE
Confidence 4678999999999999975
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.43 E-value=0.74 Score=43.33 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC------CC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD------KE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~------~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
+..|..+..... +.++++|+|.... .. .-.|+|...+..... .... .
T Consensus 5 ~~~P~~l~~~~~--~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~---------------------~ 60 (211)
T 3p4l_A 5 MMPPVGVQASIL--SHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK-YKNA---------------------N 60 (211)
T ss_dssp CCCCEEEEEEEC--SSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC-CEEE---------------------E
T ss_pred CCCCCCEEEEec--CCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce-EEEe---------------------C
Confidence 345766666543 3579999999632 11 236777644322110 0000 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccC-C---CccceeeEEECCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSE-A---VDWSDKIQFRTPPA 322 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~-~---~~~S~~~~F~T~P~ 322 (639)
+.....+|++|+|+|.|.++|..- . ..||....|+|.+.
T Consensus 61 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 61 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred CCceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 112367899999999999999742 1 24677888998653
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=93.39 E-value=0.3 Score=40.54 Aligned_cols=71 Identities=21% Similarity=0.362 Sum_probs=42.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
+..|..+++.-.. .+++.|+|...... .-.|+|...+.......... + +-...++
T Consensus 5 ~~~P~~l~v~~~t--~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~v------------~---------~~~t~~~ 61 (97)
T 3qht_C 5 SSVPTKLEVVAAT--PTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTV------------P---------GSSSTAT 61 (97)
T ss_dssp CCSSSSCEEEEEE--TTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEEE------------E---------TTCCEEE
T ss_pred CCCCCceEEEecC--CCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEEe------------C---------CCcCEEE
Confidence 4467666665543 57999999865332 12677774432110000000 1 1123678
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
|+||+|+|.|..+|..
T Consensus 62 l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 62 ISGLSPGVDYTITVYA 77 (97)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEE
Confidence 9999999999999875
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.29 E-value=0.79 Score=42.16 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=54.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++... ..++++|+|.-.... .-.|+|...+.. . ..... +. .....
T Consensus 6 ~p~~P~~l~~~~~--~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~-~~~~~------------~~---------~~~~~ 60 (186)
T 1qr4_A 6 DLDNPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGK-K-NEMEI------------PV---------DSTSF 60 (186)
T ss_dssp --CCCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCC-E-EEEEE------------CT---------TCSEE
T ss_pred CCcCCCceEEEec--CCCEEEEEEeCCCCCccEEEEEEEeCCCC-e-eEEEC------------CC---------CCCEE
Confidence 3667877766653 457999999965432 236777632211 0 00000 00 11246
Q ss_pred EecCCCCCcEEEEEEccC-CCccce--eeEEECCCCCCCCceEEEE
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPAGGSDEMKFLA 332 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~~g~~~~~f~v 332 (639)
+++||+|++.|.++|... +.+.|. ...++|.|.+. ..+++..
T Consensus 61 ~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~P-~~l~~~~ 105 (186)
T 1qr4_A 61 ILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGSP-KGISFSD 105 (186)
T ss_dssp EEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCCC-SCEEEES
T ss_pred EECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCCC-CccEEEE
Confidence 889999999999999753 233443 45677876542 4555543
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.28 E-value=4.8 Score=40.96 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=54.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
+..|..+.+.. ...+++.|.|...... . -.|+|...+.......... + +.....+
T Consensus 186 ~~~P~~l~~~~--~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~ 242 (368)
T 1fnf_A 186 LDSPTGIDFSD--ITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRV------------P---------HSRNSIT 242 (368)
T ss_dssp CCCCEEEEEES--CCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEEEE------------E---------TTCCEEE
T ss_pred CCCCCccEEEE--ccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEEEe------------C---------CCcCEEE
Confidence 45676555543 3458999999965432 2 3677774432111110000 0 1113568
Q ss_pred ecCCCCCcEEEEEEccCC-Cccc--eeeEEECCCCCCCCceEEEEEec
Q 006591 291 MTGLQPSSTVSYRYGSEA-VDWS--DKIQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~P~~g~~~~~f~v~gD 335 (639)
++||+|++.|.|+|..-+ .+.+ ....+.++|.. +..+++...++
T Consensus 243 i~~L~p~t~Y~~~V~A~n~~g~~~~~~~~~~t~p~~-P~~l~~~~~~~ 289 (368)
T 1fnf_A 243 LTNLTPGTEYVVSIVALNGREESPLLIGQQSTVSDV-PRDLEVVAATP 289 (368)
T ss_dssp EESCCTTCEEEEEEEEEETTEECCCEEEEEECCCCS-CEEEEEEEEET
T ss_pred ECCCCCCCEEEEEEEEEeCCccCCcccccccCCCCC-CCeeEEEecCC
Confidence 899999999999997521 2222 23456676653 23566655554
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=93.27 E-value=0.36 Score=40.46 Aligned_cols=70 Identities=23% Similarity=0.357 Sum_probs=41.8
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC--C--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK--E--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~--~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
..|..+++.-. +.+++.|.|..... . .-.|+|...+...... .... |. -...+
T Consensus 6 ~~P~~l~v~~~--t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~--~~~v----------~~---------~~t~~ 62 (101)
T 3k2m_C 6 SVPTKLEVVAA--TPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ--EFTV----------PY---------SSSTA 62 (101)
T ss_dssp BSSCEEEEEEE--ETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE--EEEE----------ET---------TCCEE
T ss_pred CCCcceEEeec--CCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE--EEEc----------CC---------CccEE
Confidence 45766666543 35799999986542 1 1267777543211100 0000 11 11367
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+|+||+|+|.|..+|..
T Consensus 63 ~l~~L~p~t~Y~~~V~A 79 (101)
T 3k2m_C 63 TISGLSPGVDYTITVYA 79 (101)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEE
Confidence 89999999999999865
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=93.26 E-value=1.1 Score=42.16 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=54.4
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.. ...++++|.|...... .-.|+|...+.......... + +.....++
T Consensus 25 ~P~~l~~~~--~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~i 81 (203)
T 2gee_A 25 QPTDLSFVD--ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFV------------D---------SSVGYYTV 81 (203)
T ss_dssp CCEEEEEEC--CTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEEEE------------E---------TTCCEEEE
T ss_pred CCCccEEEe--cCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeEEc------------C---------CCccEEEe
Confidence 565554444 3458999999966542 23677764433211000000 0 01125789
Q ss_pred cCCCCCcEEEEEEcc-CCCccceeeEEECCCCC-CCCceEEEEEec
Q 006591 292 TGLQPSSTVSYRYGS-EAVDWSDKIQFRTPPAG-GSDEMKFLAYGD 335 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~-~~~~~S~~~~F~T~P~~-g~~~~~f~v~gD 335 (639)
++|+|+|.|.++|.. .+.+.|....+++.+.. ....+++...++
T Consensus 82 ~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 82 TGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 999999999999975 33345665555543222 223466655554
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.26 E-value=0.51 Score=40.87 Aligned_cols=89 Identities=21% Similarity=0.312 Sum_probs=48.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-C----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
-|..|..+.+... ..++++|.|...... . -.|+|....... . .+..-... +. ..
T Consensus 16 ~P~~P~~~~~~~~--~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~-~---~w~~~~~~------~~---------~~ 74 (127)
T 1uey_A 16 VPNPPFDLELTDQ--LDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKP-G---LWHHQTEV------SG---------TQ 74 (127)
T ss_dssp SCCCCEEEEEECC--SSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCT-T---CEEEEEEE------ES---------SC
T ss_pred CCcCCCCcEEEEc--cCCEEEEEEECCCCCCCCceEEEEEEEECCCCC-C---ccEEEeee------CC---------Cc
Confidence 3667776666543 357999999964322 2 256665332110 0 11100000 00 00
Q ss_pred EEEEecCCCCCcEEEEEEccC-CC---cccee-eEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE-AV---DWSDK-IQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~-~~---~~S~~-~~F~T~P~ 322 (639)
.. .+.+|+|+|.|.|||..- .. .+|.. ..|+|.+.
T Consensus 75 ~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 75 TT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 12 367999999999999752 22 35555 47888653
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.19 E-value=0.59 Score=44.04 Aligned_cols=88 Identities=17% Similarity=0.268 Sum_probs=51.6
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..+.+...+.+.+++.|+|....... -.|+|...+...... +..... + +.....
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~~~-------~---------~~~~~~ 168 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD---WVIEPV-------V---------GNRLTH 168 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG---SEEEEE-------E---------SSCSEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc---eEEEEe-------c---------CCeeEE
Confidence 6766776655323579999999644211 267777443321110 000000 0 112357
Q ss_pred EecCCCCCcEEEEEEccC----CCccceeeEEECCC
Q 006591 290 VMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPP 321 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P 321 (639)
+|+||+|++.|.++|..- ...+|+...|++..
T Consensus 169 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 169 QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp EECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 899999999999999642 12477888888753
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=93.10 E-value=0.42 Score=46.29 Aligned_cols=86 Identities=13% Similarity=0.228 Sum_probs=53.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|.-+++.... ..+++.|+|...... .-.|+|...+...+...... . +..
T Consensus 122 p~pP~~l~~~~~~-~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~~------------~---------~~~ 179 (227)
T 1eer_B 122 LDAPVGLVARLAD-ESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEI------------L---------EGR 179 (227)
T ss_dssp CCCCEEEEEEECS-STTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEEE------------C---------TTC
T ss_pred cCcCcceEEEEcC-CCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEEE------------e---------cCc
Confidence 6678877777643 247899999976532 13677774433222110000 0 011
Q ss_pred EEEEecCCCCCcEEEEEEccCC---------CccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA---------VDWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~---------~~~S~~~~F~T~ 320 (639)
..+.|.+|+|||+|..||.... ..||....|+|+
T Consensus 180 ~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 180 TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred eEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 2578899999999999997531 247888889994
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.06 E-value=0.49 Score=40.39 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=41.9
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++... ..+++.|+|....... -.|+|...+.......... ++..
T Consensus 17 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~---------------------~~~~ 73 (119)
T 1wfn_A 17 VPGPVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYL---------------------PNVT 73 (119)
T ss_dssp SCCCCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEEE---------------------CSSC
T ss_pred CCCCCCceEEEEC--CCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEEEe---------------------CCCc
Confidence 3556766655543 4579999998553321 2566654332111000000 0122
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..++|++|+|+|.|.+||..
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A 93 (119)
T 1wfn_A 74 LEYRVTGLTALTTYTIEVAA 93 (119)
T ss_dssp CEEEEESCCTTCEEEEEEEE
T ss_pred eEEEEcCCCCCCEEEEEEEE
Confidence 46789999999999999975
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=92.88 E-value=1.1 Score=43.00 Aligned_cols=99 Identities=12% Similarity=0.203 Sum_probs=57.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
+..|..+.+... ..++++|+|.-.... .-.|+|...+..... ..... +.....+
T Consensus 6 ~~~P~~l~~~~~--~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~-~~~~~---------------------~~~~~~~ 61 (234)
T 3f7q_A 6 LGAPQNPNAKAA--GSRKIHFNWLPPSGKPMGYRVKYWIQGDSESE-AHLLD---------------------SKVPSVE 61 (234)
T ss_dssp CCCCEEEEEEEC--SSSCEEEEEECCSSCCCEEEEEEEETTSCGGG-CEEEE---------------------ESSSEEE
T ss_pred CCCCcceEEEEc--CCCEEEEEEECCCCccceEEEEEEECCCCccc-eEEEc---------------------CCccEEE
Confidence 456776666654 357999999965322 236777754432110 00000 0112578
Q ss_pred ecCCCCCcEEEEEEccCC----CccceeeEEECCCCCC--CCceEEEEEec
Q 006591 291 MTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPAGG--SDEMKFLAYGD 335 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~~g--~~~~~f~v~gD 335 (639)
|++|+|+|.|.++|..-+ ..+|....|+|.+... ...+++...++
T Consensus 62 i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 62 LTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred ECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 999999999999986421 2367778898864321 23456554444
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=92.86 E-value=1.1 Score=41.94 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=41.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+.... ...+++.|+|...... .-.|+|.. +...+...... + +..
T Consensus 109 ~P~~P~~~~~~~--~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~~~~~------------~---------~~~ 164 (209)
T 2vkw_A 109 EPSAPKLEGQMG--EDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKPEIRL------------P---------SGS 164 (209)
T ss_dssp SCCCCEEEEEEC--TTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCCCEEE------------C---------TTC
T ss_pred CCCCCccccccc--ccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCceeeec------------C---------CCc
Confidence 366776644433 3458999999975321 12677764 22111110000 0 112
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...+|++|+|+|.|.++|..
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A 184 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVA 184 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEE
Confidence 35689999999999999975
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=92.44 E-value=0.95 Score=44.24 Aligned_cols=86 Identities=13% Similarity=0.275 Sum_probs=51.5
Q ss_pred CCCCCceeEEeeccCCC----CceEEEEEeCCCC---------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCC
Q 006591 212 NPKKPLYGHLSSVDSTG----TSMRLTWVSGDKE---------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDF 278 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~----~sm~v~W~T~~~~---------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~ 278 (639)
.|..|.-+.+.+..... .++.|.|...... .-.|+|...+...+ .... +.
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w------~~~~--------~~--- 192 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKW------KMMD--------PI--- 192 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSC------EECC--------CB---
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCce------EEEe--------cc---
Confidence 46778777655533222 3599999976432 12667765433211 1100 00
Q ss_pred CccCCceEEEEEecCCCCCcEEEEEEccC---C---CccceeeEEECC
Q 006591 279 GWHNPGYIHTAVMTGLQPSSTVSYRYGSE---A---VDWSDKIQFRTP 320 (639)
Q Consensus 279 g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~---~~~S~~~~F~T~ 320 (639)
....+.|.+|+||++|..||... + ..||....|+|+
T Consensus 193 ------~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 193 ------LTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ------SSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ------CCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 11357889999999999999752 1 146777888875
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.43 E-value=0.28 Score=41.39 Aligned_cols=71 Identities=24% Similarity=0.427 Sum_probs=42.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC---C-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK---E-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~---~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
+..|..+++.-. +.++++|.|..... . . -.|+|...+.......... + +-..
T Consensus 8 ~~~P~~l~v~~~--t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v------------~---------~~~t 64 (103)
T 3t04_D 8 SSVPTKLEVVDA--TPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTV------------P---------GYYS 64 (103)
T ss_dssp CCCCCSCEEEEE--ETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEE------------E---------TTCC
T ss_pred CCCCceeEEEec--CCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEc------------C---------CCcC
Confidence 446766666543 35899999986542 1 1 2677875432111000000 1 1123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.++|+||+|+|.|..+|..
T Consensus 65 s~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 65 TATISGLKPGVDYTITVYA 83 (103)
T ss_dssp EEEECSCCTTCCEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 6889999999999999865
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.12 E-value=0.86 Score=45.04 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=27.4
Q ss_pred EEEecCCCCCcEEEEEEccC---CCccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~P 321 (639)
..+|+||+|+|.|.++|..- +..+|....|+|++
T Consensus 254 ~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 254 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 57899999999999999642 22478889999975
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.07 E-value=0.71 Score=39.84 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=18.7
Q ss_pred eEEEEEecCCCCCcEEEEEEcc
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
-...++++||+|++.|.+||..
T Consensus 69 ~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 69 KSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp EEEEEEECSCCSSEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEE
Confidence 3456789999999999999975
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=92.04 E-value=0.38 Score=52.81 Aligned_cols=129 Identities=13% Similarity=0.161 Sum_probs=70.5
Q ss_pred eeEEEEEEeeeccceEEEEeec-CCc-cceeeeccccccccCCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEE
Q 006591 173 GGSIIFHVINIRTDIEFVFFAG-GFA-TPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQV 245 (639)
Q Consensus 173 ~g~~~~~l~n~r~~~~f~~f~~-g~~-~~~~~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V 245 (639)
..+.+|.+...-..|.|.+.+- ++. .+..+.. ....-.-|..|..+++... ..+++.|+|...... .-+|
T Consensus 346 ~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S~~~~-~~~~~v~P~PP~nl~v~~~--s~~sl~LsW~pP~~~~g~~l~YeV 422 (488)
T 2q7n_A 346 TYRLGVQMHPGQEIHNFTLTGRNPLGQAQSAVVI-NVTERVAPHDPTSLKVKDI--NSTVVTFSWYLPGNFTKINLLCQI 422 (488)
T ss_dssp CEEEEEECCSSCCCCEEEEEEEETTEEEEEEEEC-CGGGTBCCCCCEEEEEEEC--STTCEEEEEEEEEECSSSEEEEEE
T ss_pred eEEEEEcCCCCccEEEEEEEEEeCCCCccceEEE-EecCCCCCCCCeEEEEEec--CCCEEEEEEeCCCCCCCcceEEEE
Confidence 3455666554336677777652 111 1110000 1111124677877776553 357999999965321 1367
Q ss_pred EEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccC--C----CccceeeEEEC
Q 006591 246 EYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSE--A----VDWSDKIQFRT 319 (639)
Q Consensus 246 ~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~--~----~~~S~~~~F~T 319 (639)
+|...+...+....+. . +. ....+.+.|.+|+|+|+|..||... + ..||+...|+|
T Consensus 423 ~Yr~~~~~~w~~~~~~--~---------~~-------~~~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T 484 (488)
T 2q7n_A 423 EICKANSKKEVRNATI--R---------GA-------EDSTYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLT 484 (488)
T ss_dssp EEBCTTSCCEEEEEEE--E---------CC-------EEEEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCC
T ss_pred EEEECCCCCceEEEEE--e---------cC-------CCcEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEEC
Confidence 7775443211000000 0 00 0134667999999999999998642 1 25788888999
Q ss_pred CCC
Q 006591 320 PPA 322 (639)
Q Consensus 320 ~P~ 322 (639)
++.
T Consensus 485 ~e~ 487 (488)
T 2q7n_A 485 TEA 487 (488)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.99 E-value=0.67 Score=40.02 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=49.5
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCc-c-----cceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKT-Q-----TSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~-~-----~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
|..|..+++. +-+.++++|+|...... .-.|+|...... . ......... + +
T Consensus 9 pp~p~~L~v~--~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v----------~---------~ 67 (112)
T 2cui_A 9 RPRLSQLSVT--DVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMV----------P---------G 67 (112)
T ss_dssp CCCCCCCEEE--SCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEE----------E---------T
T ss_pred CCCCCceEEE--eecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEEc----------C---------C
Confidence 3445444444 45678999999865432 237888743221 0 000000000 1 1
Q ss_pred eEEEEEecCCCCCcEEEEEEccCC-Cccc--eeeEEECCCCC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEA-VDWS--DKIQFRTPPAG 323 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~P~~ 323 (639)
-...++|+||+|+|+|..+|..-. .+-| .....+|.+.+
T Consensus 68 ~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 68 TRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 123689999999999999986422 2223 33557776544
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.89 E-value=1.1 Score=36.62 Aligned_cols=69 Identities=25% Similarity=0.372 Sum_probs=40.0
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+++.... .+++.|+|.-.... .-.|+|...+... .. .+. . . .+-...++|+
T Consensus 4 ~P~~l~~~~~~--~~si~lsW~~p~~~i~~Y~v~y~~~~~~~----~~-----~~~-~---~--------~~~~~~~~l~ 60 (94)
T 1j8k_A 4 RPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGI----HE-----LFP-A---P--------DGEEDTAELQ 60 (94)
T ss_dssp CCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEE----EE-----ECC-C---C--------CSSCCEEEEC
T ss_pred CCCccEEEeec--CCEEEEEEcCCCCCcceEEEEEEeCCCCC----ce-----EEe-c---C--------CCCccEEEeC
Confidence 35555555433 47999999754421 2367786433210 00 000 0 0 0112367899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|||.|.++|..
T Consensus 61 ~L~p~t~Y~~~V~A 74 (94)
T 1j8k_A 61 GLRPGSEYTVSVVA 74 (94)
T ss_dssp SCCCCSEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999975
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.62 E-value=1.8 Score=42.47 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=57.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCC-CCC-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGD-KEP-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~-~~~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+.+.... .++++|.|.-.. ... -.|+|+........ ..... + +.....
T Consensus 14 ~p~~P~~l~~~~~~--~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~--~~~~~----------~---------~~~~~~ 70 (283)
T 1tdq_A 14 VIDGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGGK--TTFRL----------Q---------PPLSQY 70 (283)
T ss_dssp SSCCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCCC--EEEEE----------C---------TTCSEE
T ss_pred CCCCCcEEEEEecC--CCeEEEEEECCCCceeEEEEEEEEecCCCCc--EEEEe----------C---------CCCCEE
Confidence 35678777766543 479999999765 222 37777532211110 01000 0 112357
Q ss_pred EecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCCCCCceEEEEEec
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAGGSDEMKFLAYGD 335 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~g~~~~~f~v~gD 335 (639)
.+++|+|++.|.++|... +.+.| ....|+|+|.+ +..+++...++
T Consensus 71 ~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~-P~~l~~~~~~~ 118 (283)
T 1tdq_A 71 SVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDA-PKNLRVGSRTA 118 (283)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEEEEECS
T ss_pred EecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCC-CCceEEEecCC
Confidence 899999999999999752 22333 34568887654 24566655554
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.56 E-value=0.4 Score=41.28 Aligned_cols=72 Identities=22% Similarity=0.251 Sum_probs=43.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.... .+++.|.|...... .-.|+|...+...+.... .. ..
T Consensus 17 ~P~~P~~l~~~~~~--~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~----~~------------------~~ 72 (120)
T 2yux_A 17 RPGPPQIVKIEDVW--GENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI----EH------------------YH 72 (120)
T ss_dssp CCCCCSCEEEEEEE--TTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEE----SS------------------CC
T ss_pred CCCcCCCCEEEEec--CCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEee----ec------------------CC
Confidence 36677776665433 47999999864321 236777754332221110 00 00
Q ss_pred EEEEEecCCCCCcEEEEEEccC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~ 307 (639)
....++++|+|++.|.|||...
T Consensus 73 ~~~~~v~~L~p~t~Y~frV~A~ 94 (120)
T 2yux_A 73 RTSATITELVIGNEYYFRVFSE 94 (120)
T ss_dssp SSCCEECCCCSSEEEEEEECCC
T ss_pred cCEEEECCCCCCCEEEEEEEEe
Confidence 1235789999999999999764
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=91.47 E-value=1.9 Score=43.79 Aligned_cols=86 Identities=12% Similarity=0.170 Sum_probs=51.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
.|..|..+++.......+++.|+|...... .-.|+|...+...+... ... +
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~---~~~-------------------~ 253 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW---MVK-------------------D 253 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE---ECG-------------------G
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE---ccc-------------------C
Confidence 367787777766543347999999965431 12677775443222111 000 0
Q ss_pred eEEEEEecCCCCCcEEEEEEccCC----C---ccceeeEEEC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEA----V---DWSDKIQFRT 319 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~----~---~~S~~~~F~T 319 (639)
.....+|.+|+|++.|..||...+ . .||+...++|
T Consensus 254 ~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 254 LQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 113568999999999999997532 1 3556555555
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=91.41 E-value=0.86 Score=42.97 Aligned_cols=70 Identities=21% Similarity=0.305 Sum_probs=40.7
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|...++.-. +.+++.|+|...... .-.|+|...+.......... + +-...++|
T Consensus 105 ~~P~~l~v~~~--t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~v------------~---------~~~t~~~l 161 (195)
T 2qbw_A 105 SVPTNLEVVAA--TPTSLLISWDASYYGVSYYRITYGETGGNSPVQEFTV------------P---------YSSSTATI 161 (195)
T ss_dssp CSSCCCEEEEE--ETTEEEEECCCCCSSCSEEEEEEEETTCCSCCEEEEE------------E---------TTCSEEEE
T ss_pred CCCcccEEEeC--CCCEEEEEEeCCCCCccEEEEEEEECCCCCcceEEEe------------C---------CCCCEEEe
Confidence 34555555443 357999999755432 23677764432110000000 1 11136899
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+|+|+|.++|..
T Consensus 162 ~gL~p~t~Y~~~V~A 176 (195)
T 2qbw_A 162 SGLKPGVDYTITVYA 176 (195)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEEEEE
Confidence 999999999999975
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.40 E-value=1.5 Score=40.05 Aligned_cols=70 Identities=24% Similarity=0.329 Sum_probs=42.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.|..|..+.+.... .+++.|+|...... .-.|+|...+...+.... . ..
T Consensus 102 ~p~~p~~~~~~~~~--~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~---------------------~~ 156 (197)
T 3lpw_A 102 RPLPPGKITLMDVT--RNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA--T---------------------VK 156 (197)
T ss_dssp CCCCCSCEEEEEEC--SSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE--E---------------------ES
T ss_pred CCCCCcccEEEecc--CCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee--c---------------------cc
Confidence 45677666655433 57999999964321 126677644432211100 0 00
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++++|+|++.|.|+|..
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A 177 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSA 177 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEE
T ss_pred ccEEEeCCcCCCCEEEEEEEE
Confidence 124689999999999999975
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.34 E-value=1.2 Score=40.84 Aligned_cols=71 Identities=23% Similarity=0.185 Sum_probs=43.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC--C----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK--E----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+++... ..+++.|.|..... . .-.|+|...+...+.... .. ..
T Consensus 5 ~P~~P~~l~~~~~--~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~-------------------~~ 60 (197)
T 3lpw_A 5 TPGPPQDLKVKEV--TKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA---TN-------------------CH 60 (197)
T ss_dssp SCCCCEEEEEEEE--CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE---EE-------------------EC
T ss_pred CCCCCCCcEEEEe--cCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee---cC-------------------CC
Confidence 4677877666543 35799999997532 1 126677644332211110 00 01
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++++|+|++.|.|+|..
T Consensus 61 ~~~~~~~~L~p~t~Y~~~V~a 81 (197)
T 3lpw_A 61 KTSWKVDQLQEGCSYYFRVLA 81 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEE
T ss_pred ccEEEEcCCCCCCEEEEEEEE
Confidence 125689999999999999965
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=91.32 E-value=2.2 Score=42.15 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=55.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+.+.... .+++.|+|...... . -.|+|...+.......... + +.....+
T Consensus 21 p~~P~~l~~~~~~--~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~ 77 (290)
T 3r8q_A 21 IPAPTDLKFTQVT--PTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEINL------------A---------PDSSSVV 77 (290)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEEEE------------C---------TTCCEEE
T ss_pred CCCCCceEEEECC--CCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEEEc------------C---------CCccEEE
Confidence 5677777665543 57999999976432 2 3677775432111000000 0 1123678
Q ss_pred ecCCCCCcEEEEEEccCC-Cccc--eeeEEECCCCCC-CCceEEEEEec
Q 006591 291 MTGLQPSSTVSYRYGSEA-VDWS--DKIQFRTPPAGG-SDEMKFLAYGD 335 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~P~~g-~~~~~f~v~gD 335 (639)
+++|+|++.|.++|..-+ .+.+ ....|+|.+.+. ...+++...++
T Consensus 78 i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 78 VSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp ECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECS
T ss_pred eCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCC
Confidence 999999999999997522 2222 234577764432 12345544443
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.24 E-value=2.8 Score=42.92 Aligned_cols=72 Identities=11% Similarity=0.134 Sum_probs=42.9
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+.+.. ...+++.|+|...... .-.|+|...+........... +-....
T Consensus 277 ~p~~P~~l~~~~--~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~---------------------~~~~~~ 333 (375)
T 3t1w_A 277 GLDSPTGIDFSD--ITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVP---------------------HSRNSI 333 (375)
T ss_dssp CCCCCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEEEEE---------------------TTCCEE
T ss_pred CCCCCCccEeee--ccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeEEcC---------------------CCccEE
Confidence 456776655543 3458999999975432 237777754321111111100 011256
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+++||+||+.|.++|..
T Consensus 334 ~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 334 TLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp EECSCCTTCEEEEEEEE
T ss_pred EECCCCCCCEEEEEEEE
Confidence 89999999999999975
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.21 E-value=0.36 Score=52.95 Aligned_cols=127 Identities=17% Similarity=0.239 Sum_probs=70.7
Q ss_pred eEEEEEEeeeccceEEEEeec-CCc--cceeeeccccccccCCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEE
Q 006591 174 GSIIFHVINIRTDIEFVFFAG-GFA--TPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQV 245 (639)
Q Consensus 174 g~~~~~l~n~r~~~~f~~f~~-g~~--~~~~~a~s~~v~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V 245 (639)
-+..|..+.....|.|.+-+. ++. ...+ .. .......|..|..+++... ..+++.|+|...... .-+|
T Consensus 342 ~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~-~~-~~~~~VkP~PP~nl~v~~~--~stsl~LsW~~P~~~~~~~L~YeV 417 (483)
T 3e0g_A 342 YQLLFQMLPNQEIYNFTLNAHNPLGRSQSTI-LV-NITEKVYPHTPTSFKVKDI--NSTAVKLSWHLPGNFAKINFLCEI 417 (483)
T ss_dssp EEEEEECCTTCCCEEEEEEEECSSCEEEEEE-EE-CGGGGBCCCCCEEEEECCS--SSSSCCEEEECCSCCTTSBCCCEE
T ss_pred EEEEEccCCCCcEEEEEEEEEeCCCCcccce-EE-EeccccCCCCCeeeEEEEe--cCCeEEEEECCCCCCCCceEEEEE
Confidence 355666554455677766552 111 1111 00 1111235778877776543 357899999965421 3488
Q ss_pred EEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEEccCC------CccceeeEEEC
Q 006591 246 EYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEA------VDWSDKIQFRT 319 (639)
Q Consensus 246 ~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~------~~~S~~~~F~T 319 (639)
+|...+.... ...+... + . ....+.+.|.+|+|+|+|..||.... ..||+...|+|
T Consensus 418 rYr~~~~~~~--~~~vsv~---~------~-------~~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 418 EIKKSNSVQE--QRNVTIQ---G------V-------ENSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EEECSSSCCC--EEECCCB---C------C-------SSSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCC
T ss_pred EEEECCCCCc--eEEEEEe---c------c-------CCceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeEC
Confidence 9986543210 0111000 0 0 01123567999999999999997532 24778888999
Q ss_pred CCC
Q 006591 320 PPA 322 (639)
Q Consensus 320 ~P~ 322 (639)
+++
T Consensus 480 ~E~ 482 (483)
T 3e0g_A 480 TEA 482 (483)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=91.10 E-value=1.5 Score=42.94 Aligned_cols=89 Identities=19% Similarity=0.300 Sum_probs=55.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-------CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-------PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-------~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
-|..|..+.+..... ..++.|+|...... .-+|+|...+. ..+... .. .
T Consensus 112 KPdPP~nLtv~~~~~-~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v---~~----------~--------- 168 (223)
T 3up1_A 112 KPEAPFDLSVVYREG-ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHV---NL----------S--------- 168 (223)
T ss_dssp CCCCCEEEEEEEETT-TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEE---EE----------S---------
T ss_pred EcCCCcceEEEEEcC-CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEE---Ee----------c---------
Confidence 477888777776543 35789999975421 23677775431 111110 00 0
Q ss_pred ceEEEEEecCCCCCcEEEEEEccCC-----C---ccceeeEEECCCCC
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGSEA-----V---DWSDKIQFRTPPAG 323 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~~~-----~---~~S~~~~F~T~P~~ 323 (639)
.....+.+.+|+|+|+|..||.... . .||....|+|++..
T Consensus 169 ~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 169 STKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred CceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 1123456789999999999997421 1 36778999997653
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.95 E-value=0.74 Score=43.06 Aligned_cols=85 Identities=15% Similarity=0.251 Sum_probs=46.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.-.....++++|.|...... .-.|+|...+.......... + +.....+|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEATI------------P---------GHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEEE------------C---------TTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEec------------C---------CCccEEEe
Confidence 355555443322368999999975321 23677874332111000000 0 11126789
Q ss_pred cCCCCCcEEEEEEccCC-Cccc--eeeEEECC
Q 006591 292 TGLQPSSTVSYRYGSEA-VDWS--DKIQFRTP 320 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~~-~~~S--~~~~F~T~ 320 (639)
+||+|+|.|.++|..-+ .+.+ ....|+|.
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~ 92 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred cCCCCCCEEEEEEEEEecccccCceeEEEecC
Confidence 99999999999997532 2322 23456654
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=90.89 E-value=1.2 Score=37.72 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=40.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
.|..|..+...... ..+++.|+|.....+....-|+.... .......+ . .+ +. ..+
T Consensus 4 ~P~aP~~l~a~~~~-~~~~v~LsW~~~~~~~~Y~VyR~~~~~~~~~~i~~---~----------~~-------~t--sy~ 60 (103)
T 3mpc_A 4 APAFPTGLSAVLDS-SGNTANLTWNAAPGANSYNVKRSTKSGGPYTTIAT---N----------IT-------ST--NYT 60 (103)
T ss_dssp CCCCCEEEEEEECT-TSCCEEEEEECCTTCSEEEEEEESSTTCCCEEEEE---E----------EC-------SS--EEE
T ss_pred CCCCCceeEEEEeC-CCCEEEEEEECCCCCCEEEEEEecCCCCCcEEEee---c----------CC-------CC--EEE
Confidence 36678666555422 24689999997655555544553221 11111100 0 00 01 234
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
.++|+||++|+|+|..
T Consensus 61 d~~l~~g~~Y~Y~V~A 76 (103)
T 3mpc_A 61 DTGVATGTKYYYVVSA 76 (103)
T ss_dssp ETTCCTTCCCEEEEEE
T ss_pred ECCCCCCCEEEEEEEE
Confidence 5899999999999964
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.82 E-value=1.5 Score=41.13 Aligned_cols=37 Identities=27% Similarity=0.487 Sum_probs=27.5
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPAGG 324 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~~g 324 (639)
..+|.+|+|++.|.|||...+ . .+|....|+|+|..|
T Consensus 174 ~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 174 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp EEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred cEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 578999999999999996522 2 367788899998654
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.76 E-value=0.65 Score=39.91 Aligned_cols=86 Identities=15% Similarity=0.052 Sum_probs=49.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
+..|..+.+.. ..+++.|+|.-.... . -.|+|.. +...+..... . . + +-..
T Consensus 8 ~~pP~~l~v~~---~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~---~--~------~---------~~~t 63 (108)
T 1v5j_A 8 LSPPRGLVAVR---TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDP---A--V------A---------GTET 63 (108)
T ss_dssp CCCCEEEEEEE---CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEE---E--E------C---------SSCC
T ss_pred CCCCcceEEEE---eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeee---e--c------C---------CCcC
Confidence 34666666653 347899999966432 1 2788875 3222221110 0 0 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccCC-Cc---cceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-VD---WSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~~---~S~~~~F~T~P~ 322 (639)
..++.+|+|+++|.+||..-+ .+ .|+...++|...
T Consensus 64 ~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 64 ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 567999999999999986422 22 455666666543
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=90.68 E-value=0.26 Score=41.52 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=37.4
Q ss_pred ccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEE
Q 006591 224 VDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVS 301 (639)
Q Consensus 224 ~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~ 301 (639)
.+-+.++++|+|...... .-.|+|.......... ... -++-...++|+||+|||+|.
T Consensus 15 t~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~--~~~-------------------v~g~~~s~~l~~L~PgT~Y~ 73 (95)
T 2h41_A 15 TEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ--YLD-------------------LPSTATSVNIPDLLPGRKYI 73 (95)
T ss_dssp CCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCE--EEE-------------------EETTCCEEEECSCCTTCEEE
T ss_pred EEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcce--EEE-------------------CCCCccEEEECCCCCCCEEE
Confidence 445568999999865432 2377776543211100 000 01222468999999999999
Q ss_pred EEEcc
Q 006591 302 YRYGS 306 (639)
Q Consensus 302 Yrvg~ 306 (639)
-.|..
T Consensus 74 V~v~a 78 (95)
T 2h41_A 74 VNVYQ 78 (95)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.52 E-value=8.8 Score=43.41 Aligned_cols=37 Identities=14% Similarity=0.259 Sum_probs=27.0
Q ss_pred EEEEEecCCCCCcEEEEEEccCC----Ccccee---eEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA----VDWSDK---IQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~---~~F~T~P~ 322 (639)
...++|+||+|+|.|.+||..-+ ..+|.. ..|+|.+.
T Consensus 333 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 333 QNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred eeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 35788999999999999996421 235554 77888654
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.32 E-value=0.24 Score=41.83 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=42.4
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..|..+++.-.. .+++.|+|...... .-.|+|...+..... .+- . .+ +-...+
T Consensus 7 ~p~~P~~l~v~~~t--~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~---------~~~-~--v~---------~~~~~~ 63 (105)
T 2ekj_A 7 GRSPPSNLALASET--PDSLQVSWTPPLGRVLHYWLTYAPASGLGPE---------KSV-S--VP---------GARSHV 63 (105)
T ss_dssp TCCCCEEEEEEEEE--TTEEEEEEECCSSCCSBBCBBCCCTTSCSCC---------CCB-C--CB---------TTSSEE
T ss_pred CCCCCCceEEEeCC--CCEEEEEEeCCCCcceEEEEEEEECCCCCcc---------EEE-E--eC---------CCcCEE
Confidence 35678777776543 57999999976432 125556532211000 000 0 01 122367
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+|+||+|+|.|.++|..
T Consensus 64 ~l~~L~p~t~Y~~~V~A 80 (105)
T 2ekj_A 64 TLPDLQAATKYRVLVSA 80 (105)
T ss_dssp EECSCCSSCCCBCBBCB
T ss_pred EeCCCCCCCEEEEEEEE
Confidence 89999999999999875
|
| >2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.20 E-value=0.32 Score=42.56 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=30.7
Q ss_pred CeeEEEecCCC-CCCCCCEEEEEEeccCCCCCCCEEEEEcC
Q 006591 69 PFLNISVSKSS-DLSDEEFVTVTVTGVLHPSRHDWVAMISP 108 (639)
Q Consensus 69 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~p 108 (639)
..-.|++++.. .|-++|.++|.|.=-..-.+.||||||--
T Consensus 33 sRSsLt~S~~~ytiG~~q~lvI~WDIKEev~a~DWIGLy~i 73 (138)
T 2lfe_A 33 SRSSLTASMYEYTLGQAQNLIIFWDIKEEVDPSDWIGLYHI 73 (138)
T ss_dssp CCCEEEESCSEEETTCSCCEEEEEECCSCCCTTCEEEEEEC
T ss_pred ccceeEEEeeEEEecCCCcEEEEEeccCccCccceEEEEEe
Confidence 34456676555 77788899999996555599999999964
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=90.12 E-value=2.5 Score=43.11 Aligned_cols=72 Identities=21% Similarity=0.323 Sum_probs=42.9
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
-|..|..+.+.... .+++.|+|...... .-.|+|...+.......... + +-....
T Consensus 275 ~p~~P~~l~~~~~~--~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~ 331 (368)
T 1fnf_A 275 VSDVPRDLEVVAAT--PTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTV------------P---------GSKSTA 331 (368)
T ss_dssp CCCSCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEEETTCCSCCEEEEE------------E---------TTCCEE
T ss_pred CCCCCCeeEEEecC--CCEEEEEeeCCCCccceEEEEEEECCCCCccEEEEc------------C---------CCeeEE
Confidence 35667666555433 47999999865432 23677764432211100010 0 112357
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+++||+||+.|.|+|..
T Consensus 332 ~~~~L~p~t~Y~~~V~A 348 (368)
T 1fnf_A 332 TISGLKPGVDYTITVYA 348 (368)
T ss_dssp EECSCCTTCCEEEEEEE
T ss_pred EecCCCCCCEEEEEEEE
Confidence 89999999999999964
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.83 E-value=0.32 Score=42.77 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=27.9
Q ss_pred EEEecCCCCCcEEEEEEccCCC----ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEAV----DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~~----~~S~~~~F~T~P~ 322 (639)
.++++||+|+|+|.+||..-+. .||+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 4689999999999999976332 3677888999765
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.62 E-value=1.3 Score=36.91 Aligned_cols=84 Identities=14% Similarity=0.253 Sum_probs=53.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|.|+-++...+-.++-.|.|.....+ .-.+.|+...... .+..- .-|+....-+|
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g-----~Wke~----------------~Ip~h~nSYtI 65 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVG-----RWKEA----------------TIPGHLNSYTI 65 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSS-----CCEEE----------------EECSSCCEEEE
T ss_pred cceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCC-----ceeEE----------------EecCccceEEE
Confidence 566777766555578999999987654 2355666433210 11000 01355667799
Q ss_pred cCCCCCcEEEEEEccC-CCcccee--eEEEC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSDK--IQFRT 319 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~~--~~F~T 319 (639)
+||+||..|+=+|-+- ..||++. +.|.|
T Consensus 66 ~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 66 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp CSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred ecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 9999999999998764 3478765 44544
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.51 E-value=1.2 Score=38.17 Aligned_cols=68 Identities=16% Similarity=0.212 Sum_probs=40.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... . +++.|+|.-..... -.|+|..... ....... + +-..
T Consensus 18 P~~P~~l~~~~~--~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~--~~~~~~~------------~---------~~~~ 71 (116)
T 2edb_A 18 PDQPSSLHVRPQ--T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP--YAETVRV------------D---------SKQR 71 (116)
T ss_dssp CCCCSCEEEEEC--S-SCEEEEECCCSCTTBCCCEEEEEEEESST--TSEEEEE------------E---------TTCC
T ss_pred CCCCCCeEEEEC--C-CEEEEEEcCCCCCCCceeEEEEEEEeCCC--CeEEEEe------------C---------CCee
Confidence 567777776654 3 79999998653221 2666763211 1000000 0 1123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|++|+|+|.|.++|..
T Consensus 72 ~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 72 YYSIERLESSSHYVISLKA 90 (116)
T ss_dssp EEEECSCCSSSBEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 5789999999999999965
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=88.91 E-value=1.7 Score=37.77 Aligned_cols=68 Identities=19% Similarity=0.324 Sum_probs=41.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... . +++.|+|.-..... -.|+|.. +.... ..... + +...
T Consensus 28 P~~P~~l~~~~~--~-~sv~l~W~~P~~~~g~i~~Y~v~y~~-~~~~~-~~~~~------------~---------~~~~ 81 (126)
T 1x5i_A 28 PEVPSSLHVRPL--V-TSIVVSWTPPENQNIVVRGYAIGYGI-GSPHA-QTIKV------------D---------YKQR 81 (126)
T ss_dssp CCSCSEEEEEEE--T-TEEEEEEECCSCTTBCCCEEEEEECS-SCGGG-EEEEC------------C---------TTCC
T ss_pred CCCCCeeEEEec--C-CEEEEEEcCCCCCCCCEeEEEEEEEc-CCCCc-eEEEe------------C---------CCee
Confidence 567777776654 2 79999999654221 2666762 22110 00000 0 1123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|++|+|+|.|.++|..
T Consensus 82 ~~~i~~L~p~t~Y~~~V~A 100 (126)
T 1x5i_A 82 YYTIENLDPSSHYVITLKA 100 (126)
T ss_dssp EEEECSCCSSCEECCEEEE
T ss_pred EEEEeCCCCCCEEEEEEEE
Confidence 5789999999999999975
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.20 E-value=1.1 Score=43.23 Aligned_cols=91 Identities=13% Similarity=0.245 Sum_probs=53.3
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC----------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCcc
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE----------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWH 281 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~ 281 (639)
-|..|..+.+.. .+.+.|+|...... .-+|+|...+. .+.....+....
T Consensus 100 kp~PP~nltv~~----~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------- 158 (219)
T 3tgx_A 100 KPAPPFDVTVTF----SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------- 158 (219)
T ss_dssp CCCCCEEEEEEE----SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC----------------
T ss_pred EeCCCCceEEEe----CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe----------------
Confidence 467787555552 25899999975432 23677775542 221110110000
Q ss_pred CCceEEEEEecCCCCCcEEEEEEccC---C----C---ccceeeEEECCCCC
Q 006591 282 NPGYIHTAVMTGLQPSSTVSYRYGSE---A----V---DWSDKIQFRTPPAG 323 (639)
Q Consensus 282 ~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~----~---~~S~~~~F~T~P~~ 323 (639)
..+....+.+.+|+||++|..||... + . .||+...|+|++..
T Consensus 159 ~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 159 VDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred cCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 01234566788999999999999641 1 2 36888999998753
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=88.11 E-value=2.7 Score=39.10 Aligned_cols=86 Identities=12% Similarity=0.175 Sum_probs=47.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.. ..++++|+|...... .-.|+|...+. ..+....... +.. .
T Consensus 6 P~~P~~~~~~~---~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~-----------~~~---------~ 62 (205)
T 1cfb_A 6 PNAPKLTGITC---QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV-----------PNT---------D 62 (205)
T ss_dssp CCCCEEEEEEE---CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE-----------ETT---------C
T ss_pred CCCCCCcEEEe---cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc-----------CCC---------c
Confidence 66787766665 468999999965321 12677764322 1111110000 110 1
Q ss_pred EEEEecCCCCCcEEEEEEccC-C---Cccc-eeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE-A---VDWS-DKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~-~---~~~S-~~~~F~T~P~ 322 (639)
...++ +|+|+|.|.|||..- . ..+| ....++|.+.
T Consensus 63 ~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 63 SSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp SEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred eEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 12345 899999999999642 1 1355 4567887653
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=87.89 E-value=5.4 Score=40.07 Aligned_cols=97 Identities=16% Similarity=0.304 Sum_probs=53.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++... .+++.|+|....... -+|+|...+...+.. .......|... .... .....
T Consensus 199 ~P~pP~~l~~~~~---~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~--~~~~~~~c~~~--~~~~-----~~~~~ 266 (314)
T 3bpo_C 199 KPDPPHIKNLSFH---NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV--FYVQEAKCENP--EFER-----NVENT 266 (314)
T ss_dssp ECCCCEEEEEEEE---TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE--EEESCCCCCCT--TSSC-----CCSSE
T ss_pred eeCCCCEEEEEEc---CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE--Eeccccccccc--cccc-----ccCCc
Confidence 3778887777632 369999999765321 367787544322210 01111122200 0000 01234
Q ss_pred EEEEecCCCCCcEEEEEEccCC-------C----ccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-------V----DWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-------~----~~S~~~~F~T~ 320 (639)
..+.|.+|+|+|+|..||.... . .||....|.+-
T Consensus 267 ~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 267 SCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp EEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred eEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 5778999999999999986421 2 35666777654
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=87.76 E-value=0.84 Score=43.92 Aligned_cols=92 Identities=16% Similarity=0.241 Sum_probs=50.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++... ..+++.|+|.-.... .-.|+|...+..... ......... ......
T Consensus 99 P~~P~~l~~~~~--~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~---------------~~~~~~ 160 (234)
T 3f7q_A 99 PSEPGRLAFNVV--SSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRP-IGPMKKVLV---------------DNPKNR 160 (234)
T ss_dssp CCCCCCCEEEEC--SSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCB-SSCCEECCC---------------SCTTCC
T ss_pred CCCCCccEEEEe--cCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCc-cCcceEEEe---------------cCCcce
Confidence 556766666543 357899999854321 126677643332110 000000000 001123
Q ss_pred EEEecCCCCCcEEEEEEccCC----Cccce-eeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSD-KIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~-~~~F~T~P~ 322 (639)
..+|+||+|+|.|.++|..-+ ..+|. ...|+|.+.
T Consensus 161 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 161 MLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 578999999999999996422 13554 467888654
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=87.51 E-value=5 Score=41.01 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
+..|..+.+... ..+++.|.|...... .-.|+|...+.......... + +-....
T Consensus 187 ~~~p~~l~~~~~--~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~---------~~~~~~ 243 (375)
T 3t1w_A 187 VPPPTDLRFTNI--GPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSI------------S---------PSDNAV 243 (375)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEEEE------------C---------TTCCEE
T ss_pred CCCCceeEEEec--ccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEEEc------------C---------CCcCEE
Confidence 446665555433 458999999975322 23677764332111000000 0 112357
Q ss_pred EecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCCCCCceEE
Q 006591 290 VMTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAGGSDEMKF 330 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~g~~~~~f 330 (639)
++++|+|++.|.++|..- +.+.+ ....++|.|.+ +..+++
T Consensus 244 ~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~t~p~~-P~~l~~ 286 (375)
T 3t1w_A 244 VLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDS-PTGIDF 286 (375)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCC-CEEEEE
T ss_pred EeCCCCCCCEEEEEEEEEcCCCcCCceeeEEecCCCC-CCccEe
Confidence 899999999999999742 22223 23446676543 233444
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.47 E-value=0.81 Score=50.45 Aligned_cols=92 Identities=17% Similarity=0.283 Sum_probs=54.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+.+.......+++.|+|...... .-.|+|...+...+. ... ... ..+..
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~------~~~--------~~~-----~~~~~ 258 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWS------QIP--------PED-----TASTR 258 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCB------CCC--------TTS-----SCSCC
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcE------EEc--------ccc-----CcCce
Confidence 366777777753334568999999854321 136777654432221 100 000 01122
Q ss_pred EEEEecCCCCCcEEEEEEccCC----C---ccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----V---DWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~---~~S~~~~F~T~P~ 322 (639)
...++++|+|+|.|.+||...+ . .||....|+|.+.
T Consensus 259 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 259 SSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp SEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 4578999999999999997521 1 3577788888654
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=86.47 E-value=7.8 Score=40.79 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=55.8
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCc
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGW 280 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~ 280 (639)
-|..|..+.+...+ +.+.|+|....... -.|+|+..+ ..+....+.. .
T Consensus 108 ~p~pP~~l~v~~~~---~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~~------------~----- 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ---DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAILL------------S----- 166 (419)
T ss_dssp CCCCCEEEEEEEET---TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEEE------------E-----
T ss_pred cCCCCCceEEEecC---CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeeec------------c-----
Confidence 36778777776643 58999999765431 256666443 2221111100 0
Q ss_pred cCCceEEEEEecCCCCCcEEEEEEccCC-------C---ccceeeEEECCCCCCCCceEEEEE
Q 006591 281 HNPGYIHTAVMTGLQPSSTVSYRYGSEA-------V---DWSDKIQFRTPPAGGSDEMKFLAY 333 (639)
Q Consensus 281 ~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~-------~---~~S~~~~F~T~P~~g~~~~~f~v~ 333 (639)
....+.+.+.+|.|+++|..||.... . .||+...|+|++.....+..+-.+
T Consensus 167 --~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~ 227 (419)
T 2gys_A 167 --NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECF 227 (419)
T ss_dssp --SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEE
T ss_pred --cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEE
Confidence 01222333449999999999997431 1 367889999987653333444333
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.36 E-value=3.7 Score=38.88 Aligned_cols=73 Identities=12% Similarity=0.077 Sum_probs=40.7
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC----CcEEEEecCCC-cccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGK-TQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~-~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|.-+++.... ..+++.|.|...... .-+|+|...+. ..+.... . + . ...
T Consensus 109 kp~pP~~l~v~~~~-~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~---~----~-----~---------~~~ 166 (206)
T 3v6o_A 109 KPLPPSSVKAEITI-NIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYE---V----Y-----D---------AKS 166 (206)
T ss_dssp CCCCCCSCEEEEET-TTTEEEEEC--------CEEEEEEEEESSSSCCCEEEE---E----C-----C------------
T ss_pred cCCCCCceEeEEec-CCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEe---c----c-----c---------Ccc
Confidence 46778777776542 357999999965432 23667765432 1111000 0 0 0 011
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+.|.+|+|||+|..||..
T Consensus 167 ~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 167 KSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp CEEEECCSCTTSCEEEEEEE
T ss_pred eeEEeecCCCCCEEEEEEEE
Confidence 35789999999999999975
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=85.90 E-value=2.5 Score=39.59 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=18.9
Q ss_pred eEEEEEecCCCCCcEEEEEEcc
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.....++++|+|+|.|.|||..
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEE
Confidence 4567789999999999999874
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=84.82 E-value=2 Score=46.08 Aligned_cols=71 Identities=23% Similarity=0.345 Sum_probs=43.3
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC---CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK---EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~---~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
..|..+|+.-. +.+|++|+|....+ ..-.|+|.+.+........+. + +--.+++
T Consensus 371 ~~~~~l~~~~~--~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~~------------~---------~~~~~~~ 427 (461)
T 3csg_A 371 SVPTNLEVVAA--TPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEFTV------------P---------GSKSTAT 427 (461)
T ss_dssp CSSCCCEEEEE--CSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEEEE------------E---------TTCCEEE
T ss_pred CCCcceEEecc--CCCeEEEEecCCCCCcceEEEEEEEECCCCccceEEEe------------c---------CCCceEE
Confidence 35766777654 35799999986522 123777765432110011110 0 1114789
Q ss_pred ecCCCCCcEEEEEEccC
Q 006591 291 MTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~ 307 (639)
|+||+|||+|..+|..-
T Consensus 428 i~~L~p~t~Y~~~v~a~ 444 (461)
T 3csg_A 428 ISGLSPGVDYTITVYAY 444 (461)
T ss_dssp ECSCCTTCEEEEEEEEE
T ss_pred ecCCCCCCEEEEEEEEE
Confidence 99999999999999753
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.66 E-value=6 Score=44.97 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=50.9
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC----C---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK----E---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~----~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
..|..+.+... ..++++|+|.-... . .-.|+|...+............. . + +..
T Consensus 361 ~~P~~~~~~~~--~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~-----~---~---------~~~ 421 (731)
T 2v5y_A 361 RGPRKLEVVEV--KSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWD-----T---E---------NSH 421 (731)
T ss_dssp CCCEEEEEEEE--CSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECC-----S---S---------CSS
T ss_pred CCCceeEEEec--cCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEE-----e---c---------CCc
Confidence 56766655543 35799999996432 1 23677875432111111100000 0 1 112
Q ss_pred EEEEecCCCCCcEEEEEEccC---CCccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---AVDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~~~~S~~~~F~T~P 321 (639)
...+|++|+|+|.|.++|..- +.+.|....++|.+
T Consensus 422 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 422 PQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEECSCCSSCEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred ceEEECCCCCCCEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 356899999999999998652 22346778888864
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=83.51 E-value=1.1 Score=38.25 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=28.0
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++|+||+|+|.|.++|..-+ ..+|....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 3678999999999999996421 24788888999754
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=82.75 E-value=3.5 Score=45.98 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=48.1
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeC--CCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSG--DKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~--~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|..+.+.-. +.++++|+|... ++.. -.||+...+...|....+ + +. .
T Consensus 9 ~P~pP~~P~v~~~--~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~------~------~~---------t 65 (573)
T 3uto_A 9 EPEPPRFPIIENI--LDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAK------S------RY---------T 65 (573)
T ss_dssp CCCCCEEEEEEEE--CSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEE------E------SS---------S
T ss_pred CCccCCCCEEEEe--eCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEecc------c------cC---------C
Confidence 3666766555443 458999999954 3322 377888766655533211 0 00 1
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-Cccce
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-VDWSD 313 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~~~S~ 313 (639)
..+++||.||+.|.+||...+ .|+|+
T Consensus 66 --~~~V~~L~~g~~Y~FRV~A~N~~G~s~ 92 (573)
T 3uto_A 66 --YTTIEGLRAGKQYEFRIIAENKHGQSK 92 (573)
T ss_dssp --EEEECCCCTTCEEEEEEEEEETTEECC
T ss_pred --EEEeCCCCCCCcEeEEEEEEcCceEcC
Confidence 357899999999999997633 35553
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.50 E-value=5.8 Score=36.70 Aligned_cols=20 Identities=10% Similarity=0.061 Sum_probs=17.6
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..++|+||+|++.|.++|..
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 165 TSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEE
Confidence 36789999999999999975
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.04 E-value=2.6 Score=45.63 Aligned_cols=80 Identities=15% Similarity=0.154 Sum_probs=54.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCc----------------HHHH
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGF----------------LVEW 388 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~----------------~~~w 388 (639)
.++++++.+.......+- ..+-+..+++.+.+. +||.+|++|.+++.... ...+
T Consensus 146 ~~l~ivvAsGPyT~sdnl---------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~ 216 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNF---------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTL 216 (460)
T ss_dssp SCEEEEEEESCCSCSSCC---------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSH
T ss_pred CCcEEEEEeCCccCCCcc---------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCH
Confidence 578999999987654321 235678888887775 89999999999976521 1223
Q ss_pred HHHH-Hhhhhh----hcCCceEEecCCCCcC
Q 006591 389 DFFL-HQITPV----ASRVSYMTAIGNHERD 414 (639)
Q Consensus 389 d~f~-~~l~~l----~~~vP~~~v~GNHD~~ 414 (639)
++++ ..+.++ ...+.++.+||+||..
T Consensus 217 ~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 217 DELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 4333 333333 3567799999999974
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=81.80 E-value=6.2 Score=38.75 Aligned_cols=85 Identities=19% Similarity=0.342 Sum_probs=52.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC---cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP---QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~---~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|.-+++.... ...+.|.|....... -.|+|...+...+... .. . .....
T Consensus 137 P~PP~nl~v~~~~--~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~------~~--------~---------~~~~~ 191 (247)
T 2erj_C 137 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ------SV--------D---------YRHKF 191 (247)
T ss_dssp CCCCEEEEEEESS--SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE------EE--------C---------SSCEE
T ss_pred eCCCCeEEEEECC--CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE------ec--------C---------CceEE
Confidence 6778777776543 368999999765422 2688875433222111 00 0 01256
Q ss_pred EecCCCCCcEEEEEEccCC------C----ccceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA------V----DWSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~------~----~~S~~~~F~T~P~ 322 (639)
.|.+|+|+++|..||.... . .||+...|.|.+.
T Consensus 192 ~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 192 SLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp EESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred EecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 7899999999999997532 1 3677788888643
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=81.50 E-value=5.9 Score=37.17 Aligned_cols=83 Identities=19% Similarity=0.342 Sum_probs=50.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|.-+++.... ...+.|+|...... .-.|+|...+...+... .. . .....
T Consensus 99 P~pP~~l~~~~~~--~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~------~~--------~---------~~~~~ 153 (199)
T 2b5i_C 99 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ------SV--------D---------YRHKF 153 (199)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE------EE--------C---------SSCEE
T ss_pred cCCCcEEEEEECC--CCCEEEEECCCCCCCceEEEEEEeecCCcccEEE------ec--------c---------CceEE
Confidence 6788777777654 26899999976532 23688875433222110 00 0 11356
Q ss_pred EecCCCCCcEEEEEEccCC-------C---ccceeeEEECC
Q 006591 290 VMTGLQPSSTVSYRYGSEA-------V---DWSDKIQFRTP 320 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~-------~---~~S~~~~F~T~ 320 (639)
.|.+|+|+++|..||.... . .||....|.|.
T Consensus 154 ~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 154 SLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp EECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred EecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 7899999999999997532 1 36666777764
|
| >4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.45 E-value=5.6 Score=38.32 Aligned_cols=33 Identities=3% Similarity=0.050 Sum_probs=21.0
Q ss_pred EecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
.+.+|.|++.|.+||..-+ . .+|+...+++++.
T Consensus 166 ~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~~ 202 (232)
T 4go6_B 166 AHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSK 202 (232)
T ss_dssp BCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC---
T ss_pred eeecCccCCceEEEEEEECCCcCCCCcccEEeccCCC
Confidence 3568999999999997522 2 3566666665543
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=81.22 E-value=7.1 Score=37.92 Aligned_cols=67 Identities=12% Similarity=0.168 Sum_probs=38.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEec--CCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGD--DGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~--~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|.-.+..-. +.+++.|+|.......+.-.|.. .++. .. +- +.. + ...+
T Consensus 151 p~Pp~NL~At~V--T~tSVtLsW~aP~~~~GI~gY~ly~~g~~-v~---~v------------~~~-------~--tsyt 203 (238)
T 2w1n_A 151 VNPVRDFKASEI--NKKNVTVTWTEPETTEGLEGYILYKDGKK-VA---EI------------GKD-------E--TSYT 203 (238)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCTTEEEEEEEETTEE-EE---EE------------ETT-------C--CEEE
T ss_pred cCCCCceEEEEc--cCCeEEEEecCCCCCCCceeEEEEeCCce-eE---Ee------------ecc-------c--eEEE
Confidence 445544444433 46899999997766544334431 1211 00 00 110 1 1357
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
++||+|+|.|.|+|..
T Consensus 204 ~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 204 FKKLNRHTIYNFKIAA 219 (238)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred ecCCCCCCEEEEEEEE
Confidence 8999999999999964
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=80.04 E-value=6.6 Score=36.34 Aligned_cols=34 Identities=3% Similarity=-0.088 Sum_probs=23.9
Q ss_pred EEEEecCCCCCcEEEEEEccCC-C---c-cceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-V---D-WSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-~---~-~S~~~~F~T~ 320 (639)
...+|++|+|++.|.++|..-+ . . +|....++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 3568899999999999997521 1 2 3455666664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 639 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 3e-49 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 4e-23 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 7e-22 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 3e-21 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-08 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 1e-05 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 2e-04 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 172 bits (436), Expect = 3e-49
Identities = 84/322 (26%), Positives = 130/322 (40%), Gaps = 41/322 (12%)
Query: 329 KFLAYGDMGKAPRDAST-EHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-- 385
F GD+G++ +T HY E++ +V +GD+SYA +
Sbjct: 9 TFGLIGDLGQSFDSNTTLSHY--------------ELSPKKGQTVLFVGDLSYADRYPNH 54
Query: 386 --VEWDFFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT 443
V WD + + ++ GNHE ++ + E P+ + +P
Sbjct: 55 DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE-------INETEPFKPFSYRYHVPY 107
Query: 444 ---PSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHR 500
S WYSI++AS H V+S+ + + QY W++K+L V RS+TPWLI H
Sbjct: 108 EASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 167
Query: 501 PMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDN 560
P+Y+S + + E +K KVD+V GHVH YER+ V K N
Sbjct: 168 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAY-----KITN 222
Query: 561 GIDTYDHSNYTAPVHAIIGMAG---FSLDKFNKNNATWSLSRVAKFGYLRGHA-TKQEIQ 616
G+ T + +APV+ IG AG + +S R A FG+ +
Sbjct: 223 GLCTP-VKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAH 281
Query: 617 LEFVNADTRKV--EDSFRIIRR 636
+ DS R
Sbjct: 282 FSWNRNQDGVAVEADSVWFFNR 303
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 97.9 bits (242), Expect = 4e-23
Identities = 62/327 (18%), Positives = 105/327 (32%), Gaps = 42/327 (12%)
Query: 325 SDEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF 384
+ ++F+A GD G P + ++ KA++ V D + +GD Y TG
Sbjct: 2 TPILRFVAVGDWGGVPNA----PFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV 57
Query: 385 LVEWD------FFLHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETY 438
D F P V + GNH+ S + + S
Sbjct: 58 HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYR 117
Query: 439 FPMPTPSKDRPWYSIEQASVHFTVIS---------TEHDWWLNSEQYKWIQKDLASVDRS 489
P + +V S + L Q WI+K LA+
Sbjct: 118 LRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK-- 175
Query: 490 KTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRN 549
+++ AGH P++S VK + PLL +KV L GH HN +
Sbjct: 176 -EDYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ----- 227
Query: 550 KCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGH 609
++ G N+ P + +F + + G+
Sbjct: 228 ------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRF------HFGAENSLGGFAYVE 275
Query: 610 ATKQEIQLEFVNADTRKVEDSFRIIRR 636
T +E+ + ++ A K ++ RR
Sbjct: 276 ITPKEMSVTYIEAS-GKSLFKTKLPRR 301
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 88.8 bits (220), Expect = 7e-22
Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 26/138 (18%)
Query: 186 DIEFVFFAGGFATPCILSRTQPVNFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQ-- 243
D++ + + FA P + P H++ D G + ++W + +
Sbjct: 6 DVDMPWDSDVFAVP-----------SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGAN 54
Query: 244 QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYR 303
+V Y + + + + +IH + L+ + YR
Sbjct: 55 KVFYWSENSKSQK-----------RAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYR 103
Query: 304 YGSEAVDWSDKIQFRTPP 321
G D + F TPP
Sbjct: 104 LGFG--DAKRQFWFVTPP 119
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 86.9 bits (215), Expect = 3e-21
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 210 FANPK---KPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQTSEVSTFTQEN 265
F P P H++ D G +M ++WV+ D+ V Y + +
Sbjct: 10 FRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKR--------- 60
Query: 266 MCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPP 321
+ F ++ G+IH + L+ ++ Y G + + + F TPP
Sbjct: 61 --IAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPP 112
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 53.6 bits (127), Expect = 3e-08
Identities = 29/257 (11%), Positives = 57/257 (22%), Gaps = 48/257 (18%)
Query: 333 YGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDF-F 391
Y D+ T GS +++ + V V +GDI +
Sbjct: 14 YADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRA 73
Query: 392 LHQITPVASRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWY 451
L + S ++ N +
Sbjct: 74 LDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYE 133
Query: 452 SIEQASVHFTVIST---------------------------------------------- 465
+ F ++
Sbjct: 134 FSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFV 193
Query: 466 EHDWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLL 525
+ + + +Q +W+ L D + LIF H P++ + + + L
Sbjct: 194 KFNGGFSEQQLQWLDAVLTLSDHKQERVLIF-SHLPVHPCAADPICLAWNHEAVLSVLRS 252
Query: 526 KNKVDLVLFGHVHNYER 542
V + GH H+ R
Sbjct: 253 HQSVLCFIAGHDHDGGR 269
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 45.1 bits (105), Expect = 1e-05
Identities = 24/187 (12%), Positives = 48/187 (25%), Gaps = 12/187 (6%)
Query: 352 GSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIGNH 411
G L ++ + D++ IG++ ++ F ++ +Y+ G
Sbjct: 16 GDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYV--PGPQ 73
Query: 412 ERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWL 471
+ Y + E P P+ E L
Sbjct: 74 DAPIWE----YLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEAL 129
Query: 472 NSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDL 531
+ + A + P + P + L+ S V L+ + L
Sbjct: 130 RYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGS------HEVAHLIKTHNPLL 183
Query: 532 VLFGHVH 538
VL
Sbjct: 184 VLVAGKG 190
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 41.2 bits (95), Expect = 2e-04
Identities = 19/207 (9%), Positives = 46/207 (22%), Gaps = 20/207 (9%)
Query: 352 GSLSVVKAMSDEVNNGNVDSVFHIGDIS----------YATGFLVEWDFFLHQITPVASR 401
++ + + D + +G+I A E + +
Sbjct: 13 ERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYII 72
Query: 402 VSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFT 461
+ V + V D+ + + P+ F
Sbjct: 73 ETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFE 132
Query: 462 VISTEHDWWLNSEQYKWIQKDLASVDRSKTPWL--------IFAGHRPMYSSLDGFLSVD 513
VI + + ++ K ++ + + P D
Sbjct: 133 VIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPED 192
Query: 514 KFFVKSVEPL--LLKNKVDLVLFGHVH 538
S + ++ + GHV
Sbjct: 193 PKHHGSAVVNTIIKSLNPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 639 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.85 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.78 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.76 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.66 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.59 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.26 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.24 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.06 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.04 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.96 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.84 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.52 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.32 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.32 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.94 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.85 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.04 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 96.92 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 96.9 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.89 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.85 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.83 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 96.81 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.79 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.7 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.7 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.6 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.55 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.49 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.44 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.41 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.4 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 96.38 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.34 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.33 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.26 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.25 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.19 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.19 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.17 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.13 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.09 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.09 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.01 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.96 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 95.88 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.86 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 95.79 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 95.64 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.6 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.55 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.41 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.4 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 95.33 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 95.23 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.23 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.2 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.18 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.15 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 95.14 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.1 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.09 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.09 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 95.05 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 95.04 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.04 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.99 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 94.97 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 94.9 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 94.86 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 94.78 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 94.73 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.66 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.62 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 94.59 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 94.57 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.54 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.5 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 94.42 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.41 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.34 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 94.32 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.31 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 94.19 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.03 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 93.88 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 93.83 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 93.82 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 93.77 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 93.27 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 92.41 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 92.35 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 91.64 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 91.59 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 91.28 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 90.78 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 89.6 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 89.59 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 87.64 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 87.32 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 86.94 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 86.83 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 85.68 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 85.15 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=5.5e-51 Score=426.80 Aligned_cols=285 Identities=28% Similarity=0.426 Sum_probs=232.6
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCc----HHHHHHHHHhhhhhhcC
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGF----LVEWDFFLHQITPVASR 401 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~----~~~wd~f~~~l~~l~~~ 401 (639)
.++||+++||+|.... ....+..+ .+...+|||||++||++|+++. ..+|+.|++.++++.+.
T Consensus 6 ~p~~F~v~GD~g~~~~-----------~~~~~~~~--~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~ 72 (312)
T d2qfra2 6 VPYTFGLIGDLGQSFD-----------SNTTLSHY--ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY 72 (312)
T ss_dssp CCEEEEEECSCCSBHH-----------HHHHHHHH--HHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEeeCCCCCc-----------hHHHHHHH--HHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhc
Confidence 5799999999985321 12222222 2345789999999999987653 46899999999999999
Q ss_pred CceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCC---CCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHH
Q 006591 402 VSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPS---KDRPWYSIEQASVHFTVISTEHDWWLNSEQYKW 478 (639)
Q Consensus 402 vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~---~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~W 478 (639)
+|+|+++||||+++... ....++...|..+|.+|.++ ..+.||+|++|++|||+||++..+..+.+|++|
T Consensus 73 ~P~~~~~GNHD~~~~~~-------~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~W 145 (312)
T d2qfra2 73 QPWIWTAGNHEIEFAPE-------INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTW 145 (312)
T ss_dssp SCEEECCCGGGTCCBGG-------GTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHH
T ss_pred ceEEEeccccccccccc-------ccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHH
Confidence 99999999999864321 11234566788899999764 346799999999999999999888889999999
Q ss_pred HHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccC
Q 006591 479 IQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKD 558 (639)
Q Consensus 479 L~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d 558 (639)
|+++|++++++++||+||++|+|+|+...........+|+.|++||.+|+||++|+||+|.|||++||+++++...
T Consensus 146 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~---- 221 (312)
T d2qfra2 146 LKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT---- 221 (312)
T ss_dssp HHHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS----
T ss_pred HHHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCccccc----
Confidence 9999999988899999999999999887644445567899999999999999999999999999999999886432
Q ss_pred CCCCc-cccCCCCCCcEEEEeCCCCCC---CCCCCCCCCCccceecccccEEEEEE-eCCEEEEEEEECCCCeEE--EEE
Q 006591 559 DNGID-TYDHSNYTAPVHAIIGMAGFS---LDKFNKNNATWSLSRVAKFGYLRGHA-TKQEIQLEFVNADTRKVE--DSF 631 (639)
Q Consensus 559 ~~G~~-~y~~~~~~gpv~iv~G~aG~~---l~~~~~~~~~ws~~~~~~~Gy~~v~v-~~~~L~~e~~~~~dG~v~--D~f 631 (639)
+|.. .+ .++.||||||+|+||.. ...+..+++.|++++..+|||.+|+| +.++|.++|+++.||+++ |+|
T Consensus 222 -~~~~~~~--~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~ 298 (312)
T d2qfra2 222 -NGLCTPV--KDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSV 298 (312)
T ss_dssp -SCCCSCE--ECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEE
T ss_pred -CCccccc--cCCCcCEEEEECcCCCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEE
Confidence 2211 12 24689999999999963 23455567899999999999999999 889999999999999987 999
Q ss_pred EEEecC
Q 006591 632 RIIRRQ 637 (639)
Q Consensus 632 ~I~k~~ 637 (639)
+|.|..
T Consensus 299 ~i~~~~ 304 (312)
T d2qfra2 299 WFFNRH 304 (312)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999985
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=3.1e-33 Score=286.33 Aligned_cols=264 Identities=23% Similarity=0.342 Sum_probs=185.3
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH----HHHHHHHHhh--hhhh
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL----VEWDFFLHQI--TPVA 399 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~----~~wd~f~~~l--~~l~ 399 (639)
+.+||+++||+|...... +.........++|.+.+++.+|||||++||++|..|.. .+|.++.+.+ ....
T Consensus 3 ~~~~F~vigD~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~ 78 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAP----FHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSL 78 (302)
T ss_dssp CCEEEEEECSCCCCSSTT----SSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGG
T ss_pred CCeEEEEEecCCCCCCcc----cccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhh
Confidence 479999999998664432 12222345566777778888999999999999887643 3454444332 2234
Q ss_pred cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEe------CCEEEEEEeCCC------
Q 006591 400 SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQ------ASVHFTVISTEH------ 467 (639)
Q Consensus 400 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~------G~v~fi~LDT~~------ 467 (639)
..+|+++++||||+...... .+....+..++.+| ..||++.+ +.++|+++|+..
T Consensus 79 ~~~P~~~~~GNHD~~~~~~~---------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~ 144 (302)
T d1utea_ 79 RNVPWHVLAGNHDHLGNVSA---------QIAYSKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSD 144 (302)
T ss_dssp TTCCEEECCCHHHHHSCHHH---------HHHGGGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGG
T ss_pred cCCceEEeeccccccccccc---------ccchhhccccccCC-----CcccceeecccCCCCcEEEEEccceeEeeccc
Confidence 68999999999997422100 00011222334444 24677765 469999999741
Q ss_pred -----------CCCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCc
Q 006591 468 -----------DWWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGH 536 (639)
Q Consensus 468 -----------~~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH 536 (639)
....+.+|++||+++|++ .+.+|+|+++|+|+++.... ......++.|++||++++|+++|+||
T Consensus 145 ~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH 219 (302)
T d1utea_ 145 DFVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGH 219 (302)
T ss_dssp GSTTCSCCSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECS
T ss_pred ccccccccccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCC
Confidence 011357899999999997 45789999999999987642 33456788999999999999999999
Q ss_pred ccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCC------CCCCcc-ceecccccEEEEE
Q 006591 537 VHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNK------NNATWS-LSRVAKFGYLRGH 609 (639)
Q Consensus 537 ~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~------~~~~ws-~~~~~~~Gy~~v~ 609 (639)
+|.|+|+.+ .+++.||++|+||........ ....|. ......+||++++
T Consensus 220 ~H~~~r~~~------------------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~ 275 (302)
T d1utea_ 220 DHNLQYLQD------------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVE 275 (302)
T ss_dssp SSSEEEEEC------------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEE
T ss_pred CcceEEEec------------------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEE
Confidence 999999742 245679999988874322111 111222 1223568999999
Q ss_pred EeCCEEEEEEEECCCCeEEEEEEEEecC
Q 006591 610 ATKQEIQLEFVNADTRKVEDSFRIIRRQ 637 (639)
Q Consensus 610 v~~~~L~~e~~~~~dG~v~D~f~I~k~~ 637 (639)
|++++|+++|++ .+|+++|+++|.+..
T Consensus 276 v~~~~l~~~~~~-~~G~~~~~~~~~~~~ 302 (302)
T d1utea_ 276 ITPKEMSVTYIE-ASGKSLFKTKLPRRA 302 (302)
T ss_dssp ECSSCEEEEEEE-TTSCEEEEEEECCCC
T ss_pred EECCEEEEEEEe-CCCCEEEEEEecCCC
Confidence 999999999997 599999999998863
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.89 E-value=1.4e-22 Score=203.52 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=150.9
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhh--cC
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVA--SR 401 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~--~~ 401 (639)
..|||++++|+|....... .+........++++++.+++ .+||||+++||+++ .|...+|+.+.+.++++. ..
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~--~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~-~g~~~~~~~~~~~l~~~~~~~~ 79 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRR--LYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQLG 79 (256)
T ss_dssp CSEEEEEECCCCBC------------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS-SCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEeeCccCCCCcc--cccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCChhHHHHHHHHhhhhhhhcC
Confidence 4799999999998653221 11122234556666666643 58999999999995 466777888888777654 36
Q ss_pred CceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC----CCCHHHHH
Q 006591 402 VSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDW----WLNSEQYK 477 (639)
Q Consensus 402 vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~----~~g~~Q~~ 477 (639)
+|++.++||||... .+.+.+..........+|.++.++++|++|||.... ....+|++
T Consensus 80 ~p~~~v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~ 141 (256)
T d2hy1a1 80 AELVWVMGNHDDRA------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141 (256)
T ss_dssp CEEEECCCTTSCHH------------------HHHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHH
T ss_pred CCEEEEcccccchh------------------hhhhhhccccccccccceEEEecccceeeeeeeecCCcCCcccHHHHH
Confidence 89999999999521 222223222222234578999999999999986532 35689999
Q ss_pred HHHHHHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCc
Q 006591 478 WIQKDLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPT 556 (639)
Q Consensus 478 WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~ 556 (639)
||++.|++. +...+||++|+|++...... ........+.+..++++++|+++|+||.|...+.. +
T Consensus 142 wl~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~--~--------- 207 (256)
T d2hy1a1 142 WLAEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--F--------- 207 (256)
T ss_dssp HHHHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--E---------
T ss_pred HHHHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--E---------
Confidence 999999863 33457889999997654310 00001124678889999999999999999765431 0
Q ss_pred cCCCCCccccCCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEE
Q 006591 557 KDDNGIDTYDHSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFV 620 (639)
Q Consensus 557 ~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~ 620 (639)
++..++++|+..... ... ..+.-........||..|+++++.+....+
T Consensus 208 --------------~gi~~~~~~s~~~~~-~~~-~~~~~~~~~~~~~g~~lv~v~~d~~~~~~i 255 (256)
T d2hy1a1 208 --------------VGIPVSVASATCYTQ-DLT-VAAGGTRGRDGAQGCNLVHVYPDTVVHSVI 255 (256)
T ss_dssp --------------TTEEEEECCCCC---------------------CEEEEEECSSCEEEEEE
T ss_pred --------------CCEEEEEcCCccccc-ccc-CCCCCcccccCCCCEEEEEEECCCEEEEeC
Confidence 123345554432211 000 001111122345799999999888887764
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.85 E-value=1.6e-20 Score=190.32 Aligned_cols=194 Identities=15% Similarity=0.149 Sum_probs=131.1
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
++|+.++|+|........ +........++++++.+++ .+||+|+++||+++ .+...+|+.+.+.++.+ .+|++
T Consensus 1 M~i~hiSD~Hl~~~~~~~--~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~-~~~~~~y~~~~~~l~~l--~~p~~ 75 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKL--YGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPLY 75 (271)
T ss_dssp CEEEEECCCCBCSTTCCB--TTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCEE
T ss_pred CEEEEEecCcCCCCcccc--ccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc-CCcchhHHHHHHHHhcc--CCCEE
Confidence 589999999986543211 1111234556667776653 58999999999996 45667788888888765 68999
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDW----WLNSEQYKWIQK 481 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~----~~g~~Q~~WL~~ 481 (639)
+++||||..... ...+...+...........|.++.++++|++||+.... ....+|++||++
T Consensus 76 ~i~GNHD~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~ 141 (271)
T d3d03a1 76 LIPGNHDDKALF--------------LEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEA 141 (271)
T ss_dssp EECCTTSCHHHH--------------HHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHH
T ss_pred EEecCccchHHH--------------HHHhhhhhhccccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHH
Confidence 999999973110 00111111111111224567888899999999987532 357899999999
Q ss_pred HHhhccCCCCCeEEEEeccCCccCCCCC-CchhHHHHHHHHHHHHhC-CCeEEEeCccccccee
Q 006591 482 DLASVDRSKTPWLIFAGHRPMYSSLDGF-LSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERT 543 (639)
Q Consensus 482 ~La~~~r~~~pwvIV~~H~P~y~~~~~~-~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt 543 (639)
+|++.. + .++||++|||++...... ........++|.++|+++ +|+++|+||.|.....
T Consensus 142 ~L~~~~--~-~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 142 QLFEGG--D-KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHHHT--T-SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred HHhhhc--c-ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 999742 2 347788899987655421 111112246788899998 7999999999986654
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=3.2e-20 Score=187.59 Aligned_cols=250 Identities=14% Similarity=0.122 Sum_probs=154.3
Q ss_pred ceEEEEEecCCCCCCCCCCc-----cccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccC-----CcHHHHHHHHHhhh
Q 006591 327 EMKFLAYGDMGKAPRDASTE-----HYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYAT-----GFLVEWDFFLHQIT 396 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~-----~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~-----g~~~~wd~f~~~l~ 396 (639)
-|||++++|+|.+....... ......+...++++++.+++.+|||||++||+++.. .....|+.+.+.++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 38999999999864322110 001112356677777888889999999999999642 11223444545444
Q ss_pred hhhcCCceEEecCCCCcCCCCCCCc-cCCCCCCCcc-ccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC------
Q 006591 397 PVASRVSYMTAIGNHERDYVNSGSV-YSTPDSGGEC-GIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD------ 468 (639)
Q Consensus 397 ~l~~~vP~~~v~GNHD~~~~~~~~~-y~~~dsgge~-~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~------ 468 (639)
. ..+|++.++||||......... ....+..... .......+.. .....+.+..++++|+.+++...
T Consensus 83 ~--~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
T d2nxfa1 83 A--CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGD----DIYAYEFSPAPNFRFVLLDAYDLSVIGRE 156 (320)
T ss_dssp T--TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGG----TCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred H--cCCCEEEecccCccccccchhcccccccchhhhcccccccccCC----CCccceeecCCCeEEEEecCccccccccc
Confidence 3 3789999999999742110000 0000000000 0001111111 12345677889999999986421
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCC
Q 006591 469 ----------------------------------------WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDG 508 (639)
Q Consensus 469 ----------------------------------------~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~ 508 (639)
...+.+|++||++.|+++.+ +..++|+++|+|++.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~ 235 (320)
T d2nxfa1 157 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAAD 235 (320)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSC
T ss_pred ccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCC
Confidence 01368999999999987643 3457899999999765542
Q ss_pred CCchhHHHHHHHHHHHHhC-CCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCCCCCCcEEEEeCCCCCCCCC
Q 006591 509 FLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHSNYTAPVHAIIGMAGFSLDK 587 (639)
Q Consensus 509 ~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~~~~gpv~iv~G~aG~~l~~ 587 (639)
... .....+++.++|.++ +|+++|+||.|.+++.. .. ++..||++|+....
T Consensus 236 ~~~-~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-------------~~-----------~g~~~i~~~~~~~~--- 287 (320)
T d2nxfa1 236 PIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------------DS-----------SGAQHITLEGVIET--- 287 (320)
T ss_dssp GGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------------CT-----------TSCEEEECCCGGGC---
T ss_pred Ccc-chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-------------cc-----------CCCEEEECCeeecC---
Confidence 111 112256788899998 69999999999877542 11 23457776653211
Q ss_pred CCCCCCCccceecccccEEEEEEeCCEEEEEEEEC
Q 006591 588 FNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNA 622 (639)
Q Consensus 588 ~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~ 622 (639)
.....+|..++|.+++|.++-+.-
T Consensus 288 -----------~~~~~~~~~~~v~~d~~~~~~~~~ 311 (320)
T d2nxfa1 288 -----------PPHSHAFATAYLYEDRMVMKGRGR 311 (320)
T ss_dssp -----------CTTSCEEEEEEECSSEEEEEEEET
T ss_pred -----------CCCCCCEEEEEEECCEEEEEEecc
Confidence 113458999999999999998753
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.78 E-value=1e-18 Score=153.41 Aligned_cols=99 Identities=23% Similarity=0.416 Sum_probs=75.6
Q ss_pred ccCC---CCCceeEEeeccCCCCceEEEEEeCCC-CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 210 FANP---KKPLYGHLSSVDSTGTSMRLTWVSGDK-EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 210 ~~~~---~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
|++| ++|+|+||++++++.++|+|+|+|.+. ..+.|+||..+......+. ... .....++.+.++
T Consensus 10 ~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~---~~~--------~~~~~~~~~~~~ 78 (112)
T d2qfra1 10 FRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAK---GKM--------STYRFFNYSSGF 78 (112)
T ss_dssp GCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEE---CEE--------ECCBCSSCBCCE
T ss_pred ccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEE---EEE--------EEEEecccCCcE
Confidence 5555 679999999999888999999999754 6789999976543211110 000 011234456789
Q ss_pred EEEEEecCCCCCcEEEEEEccCCCccceeeEEECCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPP 321 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P 321 (639)
+|+|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 79 ~h~v~Lt~L~P~T~Y~YrVG~~--~~S~~~~F~T~P 112 (112)
T d2qfra1 79 IHHTTIRKLKYNTKYYYEVGLR--NTTRRFSFITPP 112 (112)
T ss_dssp EEEEEECSCCTTCEEEEEECCS--SSCEEEEEECCC
T ss_pred EEEEEECCCCCCCEEEEEECCC--CceeeEEEEcCC
Confidence 9999999999999999999976 599999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.76 E-value=1.8e-18 Score=153.46 Aligned_cols=93 Identities=22% Similarity=0.359 Sum_probs=72.6
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC--CCcEEEEecCCCccc----ceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK--EPQQVEYGDDGKTQT----SEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~~~V~yg~~g~~~~----~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+.++|.|+||++++++.++|+|+|+|... ..+.|+||.++.... +...+|+.. +...+|
T Consensus 21 ~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~---------------~~~~~~ 85 (119)
T d1xzwa1 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYY---------------NYTSAF 85 (119)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEET---------------TEECCE
T ss_pred CCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecc---------------cccCCe
Confidence 34789999999999888999999999543 567999997654322 112222221 223579
Q ss_pred EEEEEecCCCCCcEEEEEEccCCCccceeeEEECCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEAVDWSDKIQFRTPP 321 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~~~~S~~~~F~T~P 321 (639)
+|+|+|+||+|||+|+||||++ +||++++|+|+|
T Consensus 86 ~H~v~LtgL~P~T~Y~YrVG~~--~~S~~~~F~T~P 119 (119)
T d1xzwa1 86 IHHCTIKDLEYDTKYYYRLGFG--DAKRQFWFVTPP 119 (119)
T ss_dssp EEEEEECCCCTTCEEEEEECCG--GGCEEEEEECCC
T ss_pred EEEEEECCCCCCCEEEEEECCC--CccceEEEeCCC
Confidence 9999999999999999999986 599999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.66 E-value=2.3e-16 Score=152.83 Aligned_cols=178 Identities=12% Similarity=0.037 Sum_probs=119.1
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
.-+++++||+|. ..+.++++++.+.+.++|+|+++||+++......++..+.+.+..+ ..|+++
T Consensus 5 ~~~i~~~sd~hg--------------~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~ 68 (228)
T d1uf3a_ 5 VRYILATSNPMG--------------DLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CCEEEEEECCTT--------------CHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred ccEEEEEeCCCC--------------CHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEE
Confidence 347889999994 3678899998888889999999999997666666777777766654 789999
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCC----------CCCCHHHH
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHD----------WWLNSEQY 476 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~----------~~~g~~Q~ 476 (639)
++||||...... ....+......+........+.+..+++.++.++.... ......|.
T Consensus 69 i~GNHD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (228)
T d1uf3a_ 69 VPGPQDAPIWEY------------LREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVA 136 (228)
T ss_dssp ECCTTSCSHHHH------------HHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHH
T ss_pred EecCCCchhhhh------------hhhhcccccccccccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHH
Confidence 999999631100 00000000000000001123556778888887765321 12357889
Q ss_pred HHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 477 KWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 477 ~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
+|+++.++.. ...+.|+++|+|++.......+ .+.+.+++++++++++++||+|..
T Consensus 137 ~~l~~~l~~~---~~~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 137 EYRLKALWEL---KDYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp HHHHGGGGGS---CSCCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSSCE
T ss_pred HHHHHHHhhc---cCCceEEEEeeeccCccccccc-----cHHHHHHHHhcCCcEEEEcccccc
Confidence 9999988863 2334789999999765432211 245677788999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.59 E-value=1.6e-15 Score=149.20 Aligned_cols=185 Identities=11% Similarity=0.072 Sum_probs=106.4
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHH----------------
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDF---------------- 390 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~---------------- 390 (639)
+.|+++++|+|.. ...++++.+.+.+.+||+||++||+++......+|..
T Consensus 2 ~~ri~~isD~h~~--------------~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (257)
T d2yvta1 2 PRKVLAIKNFKER--------------FDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHEN 67 (257)
T ss_dssp CCEEEEEECCTTC--------------GGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred CcEEEEEeCCCCC--------------HHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccc
Confidence 4799999999953 2456777777777899999999999965322222221
Q ss_pred -------HHHhhhhhh-cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEE
Q 006591 391 -------FLHQITPVA-SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTV 462 (639)
Q Consensus 391 -------f~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 462 (639)
+...++.+. ..+|++.++||||...... ....+......+........+.+..+++.|+.
T Consensus 68 ~n~d~~~~~~~~~~L~~~~~pv~~i~GNHD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (257)
T d2yvta1 68 EHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIF------------LRAAYEAETAYPNIRVLHEGFAGWRGEFEVIG 135 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHH------------HHHHHHTTTTCTTEEECSSEEEEETTTEEEEE
T ss_pred cccchhhHHHHHHHHHhcCCcEEEEeCCCcchhhHH------------HHHhccccccccccccccceeEEecCCeEEEE
Confidence 111222222 3689999999999631100 00011111111100001123344557777777
Q ss_pred EeCCCC-------CC--CCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCC--chhHHHHHHHHHHHHhCCCeE
Q 006591 463 ISTEHD-------WW--LNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFL--SVDKFFVKSVEPLLLKNKVDL 531 (639)
Q Consensus 463 LDT~~~-------~~--~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~--~~~~~~r~~l~~Ll~~y~Vdl 531 (639)
++.... .. ....+.+|++..++. .+....|+++|+|++....... .......+.+..+++++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~ 212 (257)
T d2yvta1 136 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEV 212 (257)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSE
T ss_pred eccccCCccccchhhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcE
Confidence 664321 11 123444455555553 3445689999999976443111 111112456888899999999
Q ss_pred EEeCccccc
Q 006591 532 VLFGHVHNY 540 (639)
Q Consensus 532 vlsGH~H~Y 540 (639)
+++||.|..
T Consensus 213 ~~~GHiH~~ 221 (257)
T d2yvta1 213 AIVGHVGKG 221 (257)
T ss_dssp EEECSSCCE
T ss_pred EEEEeecCC
Confidence 999999964
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.26 E-value=2.3e-10 Score=109.06 Aligned_cols=187 Identities=12% Similarity=0.125 Sum_probs=110.2
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
-++++||+|...... +...++.+.+...++|.|+|+||++.. +..+.++.+ ..+++.|.
T Consensus 5 lIlviSD~H~~~~~~-----------~l~~~~~~~~~~~~vD~ii~~GDi~~~--------~~l~~l~~l--~~~v~~V~ 63 (193)
T d2a22a1 5 LVLLIGDLKIPYGAK-----------ELPSNFRELLATDKINYVLCTGNVCSQ--------EYVEMLKNI--TKNVYIVS 63 (193)
T ss_dssp EEEEECCCCTTTTCS-----------SCCGGGHHHHHCTTCCEEEECSCCCCH--------HHHHHHHHH--CSCEEECC
T ss_pred EEEEEeCCCCCcccc-----------hhhHHHHHHhccCCCCEEEECCCCCCH--------HHHHHHHhh--CCCEEEEc
Confidence 478999999643211 111223333455789999999999831 234444444 34688999
Q ss_pred CCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 006591 409 GNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVDR 488 (639)
Q Consensus 409 GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~r 488 (639)
||||...... ...+... .| ..-.+..++.
T Consensus 64 GN~D~~~~~~-------------~~~~~~~--lp------~~~~~~~~~~------------------------------ 92 (193)
T d2a22a1 64 GDLDSAIFNP-------------DPESNGV--FP------EYVVVQIGEF------------------------------ 92 (193)
T ss_dssp CTTCCSCCBC-------------CGGGTBC--CC------SEEEEEETTE------------------------------
T ss_pred CCCCcchhhh-------------hHHHHhh--CC------ccEEEEECCE------------------------------
Confidence 9999752210 0111111 12 1233444443
Q ss_pred CCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccCC
Q 006591 489 SKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDHS 568 (639)
Q Consensus 489 ~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~~ 568 (639)
.|.+.|...+.... + .+.+..++.+.++|++++||+|......
T Consensus 93 -----~i~l~H~~~~~~~~-----~---~~~l~~~~~~~~~dvvi~GHTH~~~~~~------------------------ 135 (193)
T d2a22a1 93 -----KIGLMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE------------------------ 135 (193)
T ss_dssp -----EEEEECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE------------------------
T ss_pred -----EEEEEeccCCCCCC-----C---HHHHHHHHhhcCCCEEEEcCccCceEEE------------------------
Confidence 34555544322211 1 3456677788899999999999854321
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEE
Q 006591 569 NYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRII 634 (639)
Q Consensus 569 ~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~ 634 (639)
.++.+.|-.|+.|.+..... ......|+.++++++++++++|+..+|++ ++..++.
T Consensus 136 -~~g~~~iNPGSvg~pr~~~~---------~~~~~syaild~~~~~v~v~~y~l~~~~~~~~~~~~~ 192 (193)
T d2a22a1 136 -KNGKLFLNPGTATGAFSALT---------PDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFS 192 (193)
T ss_dssp -ETTEEEEECCCSSCCCCTTS---------TTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred -ECCEEEEECCCCCcCcCCCC---------CCCCCEEEEEEEECCEEEEEEEEecCCeEEEEEEEEe
Confidence 12456777788876532111 01234799999999999999998777764 4444444
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.24 E-value=3.2e-10 Score=107.03 Aligned_cols=181 Identities=13% Similarity=0.115 Sum_probs=112.8
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
++++++||+|...... ...+.+.+.++..++|.|+|+||++. .+..+.++.+ ..|++.+
T Consensus 1 MkI~viSD~H~~~~~~-----------~l~~~~~~~~~~~~~D~Ii~~GDi~~--------~e~l~~l~~~--~~~v~~V 59 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCN-----------SLPAKFKKLLVPGKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIV 59 (182)
T ss_dssp CEEEEECCCCBTTTCS-----------SCCHHHHTTCCTTSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEEC
T ss_pred CEEEEEeecCCCCcch-----------hhHHHHHHHhcccCCCEEEEccCccc--------hhhHHHHHhh--CCceEEE
Confidence 5899999999653211 01123333345568999999999983 2233444444 3478999
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASVD 487 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~~ 487 (639)
.||||.... .|. .-.++.++
T Consensus 60 ~GN~D~~~~------------------------~p~------~~~~~~~g------------------------------ 79 (182)
T d1z2wa1 60 RGDFDENLN------------------------YPE------QKVVTVGQ------------------------------ 79 (182)
T ss_dssp CCTTCCCTT------------------------SCS------EEEEEETT------------------------------
T ss_pred eCCcCcccc------------------------cce------EEEEEEcC------------------------------
Confidence 999996411 111 11222222
Q ss_pred CCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCccccC
Q 006591 488 RSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYDH 567 (639)
Q Consensus 488 r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~~ 567 (639)
+.|.+.|...+.... . .+.+..++.+.++|++++||+|...-..
T Consensus 80 -----~~i~~~Hg~~~~~~~---~-----~~~l~~~~~~~~~divi~GHTH~p~~~~----------------------- 123 (182)
T d1z2wa1 80 -----FKIGLIHGHQVIPWG---D-----MASLALLQRQFDVDILISGHTHKFEAFE----------------------- 123 (182)
T ss_dssp -----EEEEEECSCCCCBTT---C-----HHHHHHHHHHHSSSEEECCSSCCCEEEE-----------------------
T ss_pred -----cEEEEEeCCCCCCCC---C-----HHHHHHHHhccCCCEEEECCcCcceEEE-----------------------
Confidence 246666766543221 1 2456667778899999999999854321
Q ss_pred CCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeE-EEEEEEEec
Q 006591 568 SNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKV-EDSFRIIRR 636 (639)
Q Consensus 568 ~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v-~D~f~I~k~ 636 (639)
.++.++|--|+.|.+...... .....|+.++++++++++..++...++| +++++.+|+
T Consensus 124 --~~~~~~iNPGSv~~pr~~~~~---------~~~~syaild~~~~~v~~~~~~l~~~~v~~~~~~~~~~ 182 (182)
T d1z2wa1 124 --HENKFYINPGSATGAYNALET---------NIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182 (182)
T ss_dssp --ETTEEEEECCCTTCCCCSSCS---------CCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred --ECCEEEEeCCCCCCCCCCCCC---------CCCCEEEEEEEeCCEEEEEEEEecCCcEEEEEEEEEcC
Confidence 134567778888765322111 1123699999999999999988766765 677777764
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.06 E-value=5.6e-09 Score=97.46 Aligned_cols=162 Identities=17% Similarity=0.177 Sum_probs=105.9
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
..|++++||+|.. ...++++++.. ..++|.|+|+||+.+..... . ..++.+
T Consensus 3 ~~kI~viSD~Hgn--------------~~al~~vl~~~-~~~~D~iih~GD~~~~~~~~------------~--~~~~~~ 53 (173)
T d3ck2a1 3 KQTIIVMSDSHGD--------------SLIVEEVRDRY-VGKVDAVFHNGDSELRPDSP------------L--WEGIRV 53 (173)
T ss_dssp CEEEEEECCCTTC--------------HHHHHHHHHHH-TTTSSEEEECSCCCSCTTCG------------G--GTTEEE
T ss_pred CCEEEEEeccCCC--------------HHHHHHHHHHh-hcCCCEEEECCcccCcccch------------h--hcCCeE
Confidence 5799999999942 35566666554 35799999999998643211 1 246889
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
+.||||.... .| ..-.+++++
T Consensus 54 V~GN~D~~~~------------------------~~------~~~~~~~~~----------------------------- 74 (173)
T d3ck2a1 54 VKGNMDFYAG------------------------YP------ERLVTELGS----------------------------- 74 (173)
T ss_dssp CCCTTCCSTT------------------------CC------SEEEEEETT-----------------------------
T ss_pred EecCcccccc------------------------cc------eEEEEEECC-----------------------------
Confidence 9999997310 01 112233333
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccceeecccCCeecCCCccCCCCCcccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYERTCSVFRNKCMGIPTKDDNGIDTYD 566 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~d~~G~~~y~ 566 (639)
..|++.|...+..... .+.+..++.+.++|++++||+|......
T Consensus 75 ------~~~~~~Hg~~~~~~~~--------~~~l~~~~~~~~~dvvi~GHTH~p~~~~---------------------- 118 (173)
T d3ck2a1 75 ------TKIIQTHGHLFDINFN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL---------------------- 118 (173)
T ss_dssp ------EEEEEECSGGGTTTTC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE----------------------
T ss_pred ------EEEEEEeCcCCCCCCC--------HHHHHHHHHhcCCCEEEeCCcCcceEEE----------------------
Confidence 2455666555443211 1345666778899999999999854321
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCccceecccccEEEEEEeCCEEEEEEEECCCCeEE
Q 006591 567 HSNYTAPVHAIIGMAGFSLDKFNKNNATWSLSRVAKFGYLRGHATKQEIQLEFVNADTRKVE 628 (639)
Q Consensus 567 ~~~~~gpv~iv~G~aG~~l~~~~~~~~~ws~~~~~~~Gy~~v~v~~~~L~~e~~~~~dG~v~ 628 (639)
.++.++|-.|+.|.+....+ ...|+.++++++.+++++++ -+++++
T Consensus 119 ---~~~~~~iNPGSvg~pr~~~~------------~~syail~~~~~~~~v~~~~-~d~~~~ 164 (173)
T d3ck2a1 119 ---EGKILFLNPGSISQPRGTIR------------ECLYARVEIDDSYFKVDFLT-RDHEVY 164 (173)
T ss_dssp ---ETTEEEEEECCSSSCCTTCC------------SCCEEEEEECSSEEEEEEEC-TTSCBC
T ss_pred ---ECCEEEEECCCCCCCCCCCC------------CCEEEEEEEeCCEEEEEEEE-eCCeEe
Confidence 13467888899887543211 23699999999999999986 466543
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.04 E-value=2.2e-10 Score=111.68 Aligned_cols=69 Identities=9% Similarity=0.177 Sum_probs=48.0
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhh-----cCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVN-----NGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~-----~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~v 402 (639)
++++++||+|.. ...++++++.++ ..++|.|+++||+++.+... .+..+.+..+..+.
T Consensus 1 v~I~visDiHg~--------------~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~~---~evi~~l~~l~~~~ 63 (251)
T d1nnwa_ 1 VYVAVLANIAGN--------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKE 63 (251)
T ss_dssp CEEEEEECCTTC--------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHS
T ss_pred CEEEEEEccccC--------------HHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCCc---HHHHHHHHHHhhcC
Confidence 489999999932 344556655543 24679999999999654332 34455555555556
Q ss_pred ceEEecCCCCc
Q 006591 403 SYMTAIGNHER 413 (639)
Q Consensus 403 P~~~v~GNHD~ 413 (639)
++++++||||.
T Consensus 64 ~v~~v~GNHD~ 74 (251)
T d1nnwa_ 64 NVKIIRGKYDQ 74 (251)
T ss_dssp CEEEECCHHHH
T ss_pred CEEEEeccHHH
Confidence 89999999996
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.96 E-value=3.1e-09 Score=98.21 Aligned_cols=63 Identities=21% Similarity=0.361 Sum_probs=47.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||+|.. ...++++++.+++.++|.|+++||++.. . -.+.+.. ...|++.+
T Consensus 1 MkI~iiSDiHgn--------------~~al~~vl~~~~~~~~D~ii~~GD~~~~----~----~~~~l~~--~~~~~~~v 56 (165)
T d1s3la_ 1 MKIGIMSDTHDH--------------LPNIRKAIEIFNDENVETVIHCGDFVSL----F----VIKEFEN--LNANIIAT 56 (165)
T ss_dssp CEEEEECCCTTC--------------HHHHHHHHHHHHHSCCSEEEECSCCCST----H----HHHHGGG--CSSEEEEE
T ss_pred CEEEEEEeCCCC--------------HHHHHHHHHHHHhcCCCEEEECCCccCH----H----HHHHHhh--cCccEEEE
Confidence 689999999942 4667788888788899999999999842 1 1222322 25789999
Q ss_pred cCCCCcC
Q 006591 408 IGNHERD 414 (639)
Q Consensus 408 ~GNHD~~ 414 (639)
.||||.+
T Consensus 57 ~GN~D~~ 63 (165)
T d1s3la_ 57 YGNNDGE 63 (165)
T ss_dssp CCTTCCC
T ss_pred ccccccc
Confidence 9999974
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.84 E-value=2.7e-09 Score=107.94 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=58.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCC-cHHHHHHHHHhhhhhh-cCCceE
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATG-FLVEWDFFLHQITPVA-SRVSYM 405 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g-~~~~wd~f~~~l~~l~-~~vP~~ 405 (639)
+||++++|+|.+........ ........++++++.+.+.++|+||++||+++... .......+.+.++.+. ..+|++
T Consensus 1 Mkilh~SDlHlG~~~~~~~~-~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~ 79 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQ-REEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHH-HHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEecCcCCCCCcCchh-HHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEE
Confidence 68999999998653210000 01112456778888888899999999999996432 2333445555565554 469999
Q ss_pred EecCCCCcC
Q 006591 406 TAIGNHERD 414 (639)
Q Consensus 406 ~v~GNHD~~ 414 (639)
.++||||..
T Consensus 80 ~i~GNHD~~ 88 (333)
T d1ii7a_ 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCCCccc
Confidence 999999974
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.52 E-value=3.2e-07 Score=85.16 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=49.2
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcH-----HHHHHHHHhhhhhhcCC
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFL-----VEWDFFLHQITPVASRV 402 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~-----~~wd~f~~~l~~l~~~v 402 (639)
+|++++||+|. ....++++++.+++.++|.++++||++...... .......+.++.+ ..
T Consensus 2 Mki~iiSDiHg--------------~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~~ 65 (184)
T d1su1a_ 2 MKLMFASDIHG--------------SLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AH 65 (184)
T ss_dssp CEEEEECCCTT--------------BHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GG
T ss_pred cEEEEEeecCC--------------CHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--CC
Confidence 69999999993 245677888877778999999999998543110 1112233333332 45
Q ss_pred ceEEecCCCCcC
Q 006591 403 SYMTAIGNHERD 414 (639)
Q Consensus 403 P~~~v~GNHD~~ 414 (639)
+++.+.||||..
T Consensus 66 ~~~~v~GNhD~~ 77 (184)
T d1su1a_ 66 KVIAVRGNCDSE 77 (184)
T ss_dssp GEEECCCTTCCH
T ss_pred cEEEecCCCCch
Confidence 899999999973
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=6.7e-07 Score=91.86 Aligned_cols=192 Identities=17% Similarity=0.180 Sum_probs=95.8
Q ss_pred ceEEEEEecCCCCCCCCCCccccCcC---hHHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHH---HHHHHHhhhhhh
Q 006591 327 EMKFLAYGDMGKAPRDASTEHYIQPG---SLSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVE---WDFFLHQITPVA 399 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~~~~~~~pg---~~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~---wd~f~~~l~~l~ 399 (639)
.++++.++|+|..-.... +...+ ....++++.++.++.+++ +++.+||+..... .+. .....+.|..+
T Consensus 8 ~ltILhtnD~Hg~l~~~~---~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~-~s~~~~g~~~~~~mn~~- 82 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNE---YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVP-ESDLQDAEPDFRGMNLV- 82 (337)
T ss_dssp EEEEEEECCCTTCCSCCT---TSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCH-HHHTTTTHHHHHHHHHH-
T ss_pred EEEEEEEeecccCCcCCC---CCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCH-HHHHhCChHHHHHHHhc-
Confidence 589999999995432111 11111 123455555555555565 5666999984322 111 12233334333
Q ss_pred cCCceEEecCCCCcCCCCCCCccCCCCCCCccccccccccCCC--C--------C-CCCCCeEEEEeCCEEE--EEEeCC
Q 006591 400 SRVSYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMP--T--------P-SKDRPWYSIEQASVHF--TVISTE 466 (639)
Q Consensus 400 ~~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P--~--------~-~~~~~~Ysfd~G~v~f--i~LDT~ 466 (639)
..- ..++||||+++... ....+......| . . ..-..|.-++.+++++ |.+-+.
T Consensus 83 -g~D-a~~~GNHEfd~G~~------------~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~ 148 (337)
T d1usha2 83 -GYD-AMAIGNHEFDNPLT------------VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTD 148 (337)
T ss_dssp -TCC-EEECCGGGGSSCHH------------HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECT
T ss_pred -CCe-EEEechhhhccchH------------HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeeccccc
Confidence 222 46689999974211 000000111111 0 0 0123567788888655 666443
Q ss_pred CCC-------------CCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEE
Q 006591 467 HDW-------------WLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVL 533 (639)
Q Consensus 467 ~~~-------------~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~Vdlvl 533 (639)
... ....+..+...+.|++. .+...+|++.|.+............. ...+...+...+||+++
T Consensus 149 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~~--~~~la~~~~~~~vD~Iv 224 (337)
T d1usha2 149 DTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAPG--DVEMARALPAGSLAMIV 224 (337)
T ss_dssp TTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCCC--HHHHHHHSCTTSSSEEE
T ss_pred ccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccch--hHHHHHhCcccCceEEe
Confidence 210 11123333333445432 35677999999987544321111100 12333344456899999
Q ss_pred eCcccccc
Q 006591 534 FGHVHNYE 541 (639)
Q Consensus 534 sGH~H~Ye 541 (639)
.||.|...
T Consensus 225 gGHsH~~~ 232 (337)
T d1usha2 225 GGHSQDPV 232 (337)
T ss_dssp CCSSCCBC
T ss_pred cCccCccc
Confidence 99999754
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.32 E-value=2.3e-06 Score=80.30 Aligned_cols=146 Identities=17% Similarity=0.210 Sum_probs=80.3
Q ss_pred EEEEecCCCCCCCCC-CccccCcChHHHHHHHHHHhhc--CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEE
Q 006591 330 FLAYGDMGKAPRDAS-TEHYIQPGSLSVVKAMSDEVNN--GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMT 406 (639)
Q Consensus 330 f~v~gD~~~~~~~~~-~~~~~~pg~~~~~~~l~~~i~~--~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~ 406 (639)
+.++||+|.+...-. .+.+.. ..+.-+.|++.+++ .+.|.|+++||+++..+...++ .+.++.+ +...+.
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~--~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~~~~~---~~~l~~L--~g~~~l 76 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVR--FKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEY---LRIWKAL--PGRKIL 76 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTC--CTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSH---HHHHHHS--SSEEEE
T ss_pred EEEEeCcCCCCcchhhcCCCCC--HHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCCHHHH---HHHHHHC--CCceEE
Confidence 346999997643210 001111 12233445555443 5679999999999765433333 3444444 235689
Q ss_pred ecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 006591 407 AIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEHDWWLNSEQYKWIQKDLASV 486 (639)
Q Consensus 407 v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~~~~~g~~Q~~WL~~~La~~ 486 (639)
+.||||.... .....|. .+. .....+-+
T Consensus 77 I~GNHD~~~~-----------------~~~~~~~-----------~~~-~~~~~~~~----------------------- 104 (188)
T d1xm7a_ 77 VMGNHDKDKE-----------------SLKEYFD-----------EIY-DFYKIIEH----------------------- 104 (188)
T ss_dssp ECCTTCCCHH-----------------HHTTTCS-----------EEE-SSEEEEEE-----------------------
T ss_pred EecCCCchhh-----------------hhhhchh-----------hHH-HHHHHhhh-----------------------
Confidence 9999997421 0111110 000 00001110
Q ss_pred cCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccccc
Q 006591 487 DRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNYE 541 (639)
Q Consensus 487 ~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Ye 541 (639)
.. -.|++.|.|+....... .....+.+.....+.+++++|+||+|...
T Consensus 105 --~g--~~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 105 --KG--KRILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp --TT--EEEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred --CC--eEEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 11 26899999985443211 12335667788889999999999999754
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.94 E-value=3.1e-05 Score=78.54 Aligned_cols=89 Identities=19% Similarity=0.196 Sum_probs=45.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcCh----HHHHHHHHHHhhcCCCc-EEEEcCCccccCCcHHHHHHHHHhhhhhhc
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGS----LSVVKAMSDEVNNGNVD-SVFHIGDISYATGFLVEWDFFLHQITPVAS 400 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~----~~~~~~l~~~i~~~~pD-fVl~~GDl~y~~g~~~~wd~f~~~l~~l~~ 400 (639)
..++|+..+|+|..-.....+. ...+. ......+.+..++.+++ +++.+||+............--..+-.++.
T Consensus 10 ~~l~iLhtnD~Hg~l~~~~~~~-~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 10 NDINFVHTTDTHGWYSGHINQP-LYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CSEEEEEECCCTTCTTCCSSCG-GGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred CEEEEEEEeccccCCCCccccc-cccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 4699999999996432111111 11111 22333444434446676 566799999643221100000012223344
Q ss_pred CCce-EEecCCCCcCC
Q 006591 401 RVSY-MTAIGNHERDY 415 (639)
Q Consensus 401 ~vP~-~~v~GNHD~~~ 415 (639)
.+++ ..++||||+++
T Consensus 89 ~lgyDa~t~GNHEfd~ 104 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYL 104 (322)
T ss_dssp TSCCSEECCCGGGSSS
T ss_pred ccCCcEEeecceeccc
Confidence 5555 67889999964
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.85 E-value=0.00014 Score=72.87 Aligned_cols=193 Identities=13% Similarity=0.025 Sum_probs=92.8
Q ss_pred ceEEEEEecCCCCCCCCC---CccccCcChHHHHHHHHHHhhcCCC-cEEEEcCCccccCCcHHHHHHHHHhhhhhhcCC
Q 006591 327 EMKFLAYGDMGKAPRDAS---TEHYIQPGSLSVVKAMSDEVNNGNV-DSVFHIGDISYATGFLVEWDFFLHQITPVASRV 402 (639)
Q Consensus 327 ~~~f~v~gD~~~~~~~~~---~~~~~~pg~~~~~~~l~~~i~~~~p-DfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~v 402 (639)
.++|+..+|+|..-.... ......-+....+..+++++++.++ -+++.+||+..... ...+.+-...++-+..--
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~-~~~~~~g~~~~~~~n~~g 80 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGLADRYFMHRLR 80 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHTT
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCH-hHhhhcchhHHHHHHhcc
Confidence 378999999996432100 0001111235556666666654444 47888999995432 222221111222111122
Q ss_pred ceEEecCCCCcCCCCCCCccCCCCCCCccccccc--cccCCCC---CCCCCCeEEEEeCCEEE--EEEeCCC--------
Q 006591 403 SYMTAIGNHERDYVNSGSVYSTPDSGGECGIPYE--TYFPMPT---PSKDRPWYSIEQASVHF--TVISTEH-------- 467 (639)
Q Consensus 403 P~~~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~--~~f~~P~---~~~~~~~Ysfd~G~v~f--i~LDT~~-------- 467 (639)
.=..++||||+++... .+...-... ..++- ....... ...-..|...+.+++++ |.+-+..
T Consensus 81 yDa~~~GNHEfd~G~~--~l~~~~~~~--~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~~~ 156 (302)
T d2z1aa2 81 YRAMALGNHEFDLGPG--PLADFLKGA--RFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPG 156 (302)
T ss_dssp CCEEECCGGGGTTCHH--HHHHHHTTC--CSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCC
T ss_pred cccccccchhhhcChh--HHHHHhhhc--ccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccccc
Confidence 3367899999975210 000000000 00000 0000000 00113466788888665 4444431
Q ss_pred -C--CCCCHHHHHHHHHHHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhC-CCeEEEeCcccccce
Q 006591 468 -D--WWLNSEQYKWIQKDLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKN-KVDLVLFGHVHNYER 542 (639)
Q Consensus 468 -~--~~~g~~Q~~WL~~~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y-~VdlvlsGH~H~YeR 542 (639)
. +....+..++..+.|++ .+..-+|++.|.... .-..+.++. +||+++.||.|..-.
T Consensus 157 ~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~---------------~d~~la~~~~giD~ii~gh~h~~~~ 217 (302)
T d2z1aa2 157 PTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG---------------EDLKLARRLVGVQVIVGGHSHTLLG 217 (302)
T ss_dssp TTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH---------------HHHHHHTTCSSCCEEEECSSCCCBS
T ss_pred CcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc---------------hhhHHHhcCCCeeeeecCccceeec
Confidence 0 11223444455555553 345669999998631 112334444 799999999998543
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.04 E-value=0.0017 Score=52.03 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=27.7
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
..+++||+|+|.|.+||..-+ . .||....|+|.|.
T Consensus 58 ~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~pd 96 (96)
T d1x5xa1 58 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 96 (96)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCcC
Confidence 467899999999999997532 2 3778889999873
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.92 E-value=0.0012 Score=53.67 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=51.2
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC--CCc----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK--EPQ----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~~----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
-|..|.-+++.-.. .++|+|+|..... ... .|+|...+... .... ..
T Consensus 2 ~p~~p~~L~~~~~~--~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~~-----~~~~----------~~---------- 54 (94)
T d1x5aa1 2 ESLSGLSLKLVKKE--PRQLELTWAGSRPRNPGGNLSYELHVLNQDEEW-----HQMV----------LE---------- 54 (94)
T ss_dssp CCCCSCCCCEEEEE--TTEEEEECCCCCSSCCSSCCEEEEEEECSSCEE-----EEEE----------SS----------
T ss_pred cCCCCCceEEEEcC--CCEEEEEEecccCCCCCcEEEEEEEEecCCceE-----EEee----------cc----------
Confidence 35667766666654 5899999985422 222 44444322210 0000 00
Q ss_pred EEEEEecCCCCCcEEEEEEccC----CCccceeeEEECCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPP 321 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P 321 (639)
...+|+||+|+|.|.+||... ...||+...|+|.|
T Consensus 55 -t~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 55 -PRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp -SEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred -CEEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 246899999999999999752 23589999999976
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0017 Score=52.88 Aligned_cols=85 Identities=19% Similarity=0.321 Sum_probs=53.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
.|..|..+++.... .+++.|.|....... -.|+|...+...... ... .+..
T Consensus 3 ~P~~p~~~~~~~~s--~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~-~~~---------------------~~~~ 58 (98)
T d1x5la1 3 APSQVVVIRQERAG--QTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSY-STL---------------------KAVT 58 (98)
T ss_dssp CCCCCCCEECSCBC--SSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSC-EEE---------------------EESS
T ss_pred CCCCCCceEEEecc--CCEEEEEEECCCCCCCCEEEEEEEeecccccceee-EEe---------------------cCCc
Confidence 46667777666544 589999998543221 257776443321110 000 0112
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~ 320 (639)
+..+|+||+|+++|.+||..-+ ..||+...|+|.
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 59 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 3678999999999999996421 247888999984
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.89 E-value=0.0005 Score=64.70 Aligned_cols=64 Identities=17% Similarity=0.232 Sum_probs=46.4
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhc-CCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNN-GNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~-~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
|++++||+|. ....++++++.+.. ...|.++++||+++.+.... +.++ +..+..+..+
T Consensus 14 rI~vIgDIHG--------------~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~------~vl~-~l~~~~~~~i 72 (219)
T d1g5ba_ 14 NIWVVGDLHG--------------CYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV------ECLE-LITFPWFRAV 72 (219)
T ss_dssp CEEEECCCTT--------------CHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH------HHHG-GGGSTTEEEC
T ss_pred eEEEEEeccc--------------CHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHH------HHHH-Hhhccccccc
Confidence 8999999993 35678888888763 56789999999997544322 2222 2234568899
Q ss_pred cCCCCc
Q 006591 408 IGNHER 413 (639)
Q Consensus 408 ~GNHD~ 413 (639)
.||||.
T Consensus 73 ~GNHE~ 78 (219)
T d1g5ba_ 73 RGNHEQ 78 (219)
T ss_dssp CCHHHH
T ss_pred cCcHHH
Confidence 999996
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0038 Score=51.26 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=51.8
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
.|..+.+.......+++.|+|....... -.|.|...+............ .+-.+..
T Consensus 14 pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 74 (111)
T d1x5ka1 14 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPV-------------------VGNRLTH 74 (111)
T ss_dssp CCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEE-------------------STTCSEE
T ss_pred CCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEe-------------------CCCeeEE
Confidence 4655666554445679999998543221 256666433322111000000 0122356
Q ss_pred EecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 290 VMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
+|+||+|++.|.+||...+ ..||+...|+|+.
T Consensus 75 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 75 QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp EECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 7999999999999997522 2478889999965
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0025 Score=51.02 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=27.6
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
.++|++|+|+|.|.+||..-+ ..||+...|+|.|
T Consensus 57 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 57 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCC
Confidence 578999999999999997521 2478888999986
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.81 E-value=0.0016 Score=52.27 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=27.8
Q ss_pred EEEecCCCCCcEEEEEEccC----CCccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P~ 322 (639)
..+|++|+|++.|.+||..- ...||+...|+|+|.
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCCC
Confidence 45789999999999999642 225788899999873
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0041 Score=50.47 Aligned_cols=87 Identities=17% Similarity=0.284 Sum_probs=52.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+..|..+++.... .+++.|+|....... -+|+|...+.... ...... ..+.
T Consensus 3 l~pP~~l~v~~~~--~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-------------------~~~~ 60 (104)
T d2b5ib2 3 LMAPISLQVVHVE--THRCNISWEISQASHYFERHLEFEARTLSPGHTWE-EAPLLT-------------------LKQK 60 (104)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCST-TSCCEE-------------------ECSC
T ss_pred cCCCCCcEEEEEe--CCEEEEEEccccccccccceeEEEEEEecccccce-eeeEEe-------------------cCCC
Confidence 3467777777654 479999998654321 2566654332110 000000 0012
Q ss_pred EEEEEecCCCCCcEEEEEEccC---C-----CccceeeEEECCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE---A-----VDWSDKIQFRTPP 321 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~---~-----~~~S~~~~F~T~P 321 (639)
-..+.|+||+|+|.|.+||... + ..||+...|+|.|
T Consensus 61 ~~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 61 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred cEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 2357889999999999999752 1 1467789999987
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0039 Score=50.59 Aligned_cols=85 Identities=15% Similarity=0.251 Sum_probs=52.1
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCCC---cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKEP---QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~~---~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
+|.++.+.......+++.|+|.....+. -.|+|...+..... .... -++-...++|
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~--~~~~-------------------v~~~~~~~~l 60 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRW--KEAT-------------------IPGHLNSYTI 60 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCC--EEEE-------------------ECSSCCEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeecccccee--eeec-------------------cCCCccEEEE
Confidence 5667777766555689999999764332 37778754432110 0110 0123346799
Q ss_pred cCCCCCcEEEEEEcc-CCCccce--eeEEECC
Q 006591 292 TGLQPSSTVSYRYGS-EAVDWSD--KIQFRTP 320 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~-~~~~~S~--~~~F~T~ 320 (639)
+||+||+.|..+|.. ...+.|+ ...|+|.
T Consensus 61 ~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 61 KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp CSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred CCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 999999999999864 2233443 4567764
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0025 Score=52.06 Aligned_cols=88 Identities=15% Similarity=0.265 Sum_probs=51.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC--CCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD--KEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|....+.. ..++++|.|.-.. +.. -.|+|...+....... ...... ...-
T Consensus 3 P~~P~~~~~~~---~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~-~~~~~~-----------------~~~~ 61 (101)
T d2haza1 3 PSSPSIDQVEP---YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKE-----------------ASME 61 (101)
T ss_dssp CCCCEEEEEEE---CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE-EEEHHH-----------------HHHH
T ss_pred CcCCccCEEEe---eCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeee-eeeeec-----------------ccce
Confidence 56775443333 3468999999532 222 2677775544322111 000000 0011
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
...+|+||+|+|+|.+||..-+ ..+|+...|+|.|
T Consensus 62 ~~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 62 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred eEEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 2468999999999999997522 2478888999987
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.60 E-value=0.0092 Score=49.14 Aligned_cols=86 Identities=20% Similarity=0.267 Sum_probs=52.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC--CC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD--KE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.... .++|+|.|.-.. .. .-.|.|...+..... . ... . . ...
T Consensus 11 P~~P~~l~~~~~~--~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~-~---~~~--~------~---------~~~ 67 (107)
T d1x5fa1 11 PSAPRDVVASLVS--TRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER-V---ENT--S------H---------PGE 67 (107)
T ss_dssp CCCCEEEEEEEEC--SSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE-E---EEC--S------S---------TTC
T ss_pred CcCCCccEEEEec--CCEEEEEEECCccCCCCceEEEEEEEEeCCCCceE-E---EEE--e------C---------CCc
Confidence 5678777766543 589999998532 11 126667644332211 0 000 0 0 112
Q ss_pred EEEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P 321 (639)
...+|++|.|++.|.+||..-+ . .+|....++|.|
T Consensus 68 ~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 68 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 4688999999999999997532 2 256778888876
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.55 E-value=0.013 Score=46.37 Aligned_cols=82 Identities=13% Similarity=0.251 Sum_probs=51.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|.-+...... .+++.|+|.-.... .-.|+|...+..... .... ++......++
T Consensus 4 aP~n~~~~~~s--~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~-~~~~---------------------~~~~~~~~i~ 59 (92)
T d1qg3a1 4 APQNPNAKAAG--SRKIHFNWLPPSGKPMGYRVKYWIQGDSESE-AHLL---------------------DSKVPSVELT 59 (92)
T ss_dssp CCEEEEEEECS--TTCEEEEEECCSSCCCEEEEEEEETTSCGGG-CEEE---------------------EESSSEEEEC
T ss_pred cCCCCEEEEcc--CCEEEEEEEecCCCccceEEeeeeccccccE-EEEe---------------------cCCccEEEEC
Confidence 56666665543 58999999965432 237778754432211 1000 0112357899
Q ss_pred CCCCCcEEEEEEccCC----CccceeeEEECC
Q 006591 293 GLQPSSTVSYRYGSEA----VDWSDKIQFRTP 320 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~ 320 (639)
+|+|+|.|.+||..-+ ..||....|+|+
T Consensus 60 ~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 60 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp SCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred CCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 9999999999997521 247888888884
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.49 E-value=0.011 Score=47.29 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=49.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-C----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.- ...++++|.|...... . -.|+|...+.... ..... + +...
T Consensus 1 P~~P~~~~~~~--~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~-~~~~~------------~---------~~~~ 56 (93)
T d2vkwa2 1 PSAPKLEGQMG--EDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWK-PEIRL------------P---------SGSD 56 (93)
T ss_dssp CCCCEEEEEEC--TTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCC-CCEEE------------C---------TTCC
T ss_pred CCCCccCEeEE--cCCCEEEEEeeCCCCCcCceEEEEEEeeecCccee-eeeec------------c---------CCce
Confidence 45676555443 3468999999975431 1 2677875443211 00000 1 1123
Q ss_pred EEEecCCCCCcEEEEEEccC-CCccce--eeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~ 320 (639)
..+++||+|++.|.+||..- ..|.|+ ...|+|.
T Consensus 57 ~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 57 HVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEEEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 57899999999999999753 234443 4668774
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.44 E-value=0.011 Score=47.82 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=52.4
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCCC-------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKEP-------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
..|.-++..... .++|+|.|....... -.|+|...+............ .+..
T Consensus 3 ~~P~~~~~~~~s--~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~-------------------~~~~ 61 (101)
T d1x4ya1 3 AGPYITFTDAVN--ETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV-------------------EGDR 61 (101)
T ss_dssp SCCEEEEEECSS--SSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEE-------------------ETTC
T ss_pred CCCcccEEEEEc--CCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEE-------------------cCCe
Confidence 367667776654 579999998543211 257777543322111000000 0122
Q ss_pred EEEEecCCCCCcEEEEEEccC----CCccceeeEEECCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE----AVDWSDKIQFRTPP 321 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~----~~~~S~~~~F~T~P 321 (639)
...+|.+|+|++.|.++|..- ...||+...++|..
T Consensus 62 ~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~~ 100 (101)
T d1x4ya1 62 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKA 100 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEccC
Confidence 345789999999999999752 23588899999853
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0032 Score=52.20 Aligned_cols=73 Identities=14% Similarity=0.235 Sum_probs=40.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-C----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-P----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.......+++.|+|...... . -.|+|...+.. +. ..... . + +...
T Consensus 11 P~~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~-~~---~~~~~-----~---~---------~~~~ 69 (108)
T d1wf5a1 11 PHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAP-WT---VLLAS-----V---D---------PKAT 69 (108)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCC-CE---EEESS-----C---C---------TTCC
T ss_pred CCCCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCC-ce---EEeee-----e---c---------CCcc
Confidence 44555444444434467999999864322 1 25667644332 10 10000 0 0 1112
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+++||+|++.|.|||..
T Consensus 70 ~~~i~~L~p~t~Y~frV~A 88 (108)
T d1wf5a1 70 SVTVKGLVPARSYQFRLCA 88 (108)
T ss_dssp EEEEESCCTTCEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEE
Confidence 4688999999999999975
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0039 Score=51.86 Aligned_cols=90 Identities=17% Similarity=0.304 Sum_probs=53.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC-C----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK-E----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+...+...++++|.|.-... . .-.|+|+..+..... ....... .+...
T Consensus 5 P~pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~---~~~~~~~----------------~~~~~ 65 (115)
T d1bqua2 5 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWS---QIPPEDT----------------ASTRS 65 (115)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCE---ECCGGGG----------------CSCCS
T ss_pred CCCCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeee---ccccccc----------------ccccc
Confidence 5677777777655567899999985322 1 136777744332211 1111110 11224
Q ss_pred EEEecCCCCCcEEEEEEcc---CCC----ccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGS---EAV----DWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~---~~~----~~S~~~~F~T~P 321 (639)
.+.|++|+|++.|.+||.. .+. .||....|+|+.
T Consensus 66 ~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 66 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 6789999999999999963 111 356778888854
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.38 E-value=0.0059 Score=49.32 Aligned_cols=69 Identities=19% Similarity=0.285 Sum_probs=45.5
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|..+.+.-.. .+++.|+|...... .-.|+|...+....... .. +.....
T Consensus 3 P~~P~nl~v~~~~--~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~---~~--------------------~~~~~~ 57 (95)
T d2b5ic1 3 PWAPENLTLHKLS--ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ---SV--------------------DYRHKF 57 (95)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE---EE--------------------CSSCEE
T ss_pred CcCCCCCEEEEEe--CCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe---ee--------------------ccccee
Confidence 6778877776544 47999999976543 24788875544322111 00 011257
Q ss_pred EecCCCCCcEEEEEEcc
Q 006591 290 VMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~ 306 (639)
+|.+|.|+|.|.+||..
T Consensus 58 ~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 58 SLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp EECSCCTTSCEEEEEEE
T ss_pred EcCCCCCCCEEEEEEEE
Confidence 88999999999999975
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.34 E-value=0.015 Score=47.16 Aligned_cols=85 Identities=13% Similarity=0.177 Sum_probs=48.3
Q ss_pred CCCCceeEEee--ccCCCCceEEEEEeCCCC-----Cc----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCcc
Q 006591 213 PKKPLYGHLSS--VDSTGTSMRLTWVSGDKE-----PQ----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWH 281 (639)
Q Consensus 213 ~~~P~~~~l~~--~~~~~~sm~v~W~T~~~~-----~~----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~ 281 (639)
|..|.-+.+.. .....++++|+|...... .. +|+|...+...+. +. .+
T Consensus 3 P~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~---~~---~~--------------- 61 (103)
T d1f6fb2 3 PEPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWE---IH---FT--------------- 61 (103)
T ss_dssp CCCCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCE---EE---EE---------------
T ss_pred CCCCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCccee---ee---cc---------------
Confidence 56676555543 233457899999965431 12 5556544332211 00 00
Q ss_pred CCceEEEEEecCCCCCcEEEEEEccCC-----CccceeeEEECC
Q 006591 282 NPGYIHTAVMTGLQPSSTVSYRYGSEA-----VDWSDKIQFRTP 320 (639)
Q Consensus 282 ~~g~~h~a~l~gL~P~t~Y~Yrvg~~~-----~~~S~~~~F~T~ 320 (639)
+.....++.||+||++|.+||...+ ..||+...+++|
T Consensus 62 --~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 62 --GHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --cceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeECc
Confidence 0112578999999999999997521 236777777664
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.0096 Score=48.33 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=51.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..++..- -+.+++.|.|...... .-.|+|...+.... .... + +-....+
T Consensus 1 P~~P~~l~~~~--~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~----~~~~----------~---------~~~~~~~ 55 (102)
T d2cuha1 1 PDGPTQLRALN--LTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL----QAET----------P---------GSAVDYP 55 (102)
T ss_dssp CSSCEEEECCC--CSSSCEEEEEECCSSCCSEEEEEEECSSSCCE----EEEE----------E---------TTCSEEE
T ss_pred CcCCCccEEEE--eCCCEEEEEEEeeeccceeeEEEEEeccccce----eeee----------e---------eeeeeEE
Confidence 45676655554 3468999999865432 23777875443211 1100 0 1112578
Q ss_pred ecCCCCCcEEEEEEccC-CCccc--eeeEEECCCCC
Q 006591 291 MTGLQPSSTVSYRYGSE-AVDWS--DKIQFRTPPAG 323 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~~-~~~~S--~~~~F~T~P~~ 323 (639)
|+||+|||.|.++|..- +.+.| ....|+|.+.+
T Consensus 56 l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 56 LHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred EccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCC
Confidence 99999999999999752 22333 34568887543
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.0094 Score=48.40 Aligned_cols=84 Identities=23% Similarity=0.396 Sum_probs=49.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTA 289 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a 289 (639)
|..|..+.+... ..+++.|+|...... . -.|+|...+..... ... . .+. ...
T Consensus 11 P~~P~~~~~~~~--~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~------~~~------------~---~~~--~~~ 65 (102)
T d1x5za1 11 PGQPLNFKAEPE--SETSILLSWTPPRSDTIANYELVYKDGEHGEEQ------RIT------------I---EPG--TSY 65 (102)
T ss_dssp CCCCEEEEEECS--SSSEEEEEEECCSCCCCCEEEECBEESSSCCCB------CCE------------E---CSS--SEE
T ss_pred CcCCCCeEEEEc--cCCEEEEEEECCCCCCccceEEEEEeCCCCceE------EEE------------c---CCc--CEE
Confidence 566776666654 358999999864322 1 25555532221110 000 0 001 145
Q ss_pred EecCCCCCcEEEEEEccC-CC---ccceeeEEECCC
Q 006591 290 VMTGLQPSSTVSYRYGSE-AV---DWSDKIQFRTPP 321 (639)
Q Consensus 290 ~l~gL~P~t~Y~Yrvg~~-~~---~~S~~~~F~T~P 321 (639)
+|+||+|+|.|.+||..- .. .+|....|+|..
T Consensus 66 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 66 RLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred EECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 799999999999999642 12 367778888863
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.02 Score=46.15 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=24.4
Q ss_pred EEEecCCCCCcEEEEEEccC----C-CccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE----A-VDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~----~-~~~S~~~~F~T~ 320 (639)
.++|.||+|+|.|.+||... . ..||+...|+||
T Consensus 66 ~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 66 EFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp EEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 56789999999999999752 1 247888888886
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.0056 Score=49.74 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=27.0
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P 321 (639)
..++++|+|++.|.+||...+ ..||+...++|.|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 467899999999999997532 2477888899876
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.19 E-value=0.025 Score=44.45 Aligned_cols=71 Identities=24% Similarity=0.294 Sum_probs=43.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
+|..+.+... +.++++|.|...... .-.|+|...+....... .. .. ..+-.+.++|+
T Consensus 3 aP~~l~v~~~--~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~-~~--~~----------------~~~~~~~~~i~ 61 (92)
T d1tdqa2 3 APKNLRVGSR--TATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEV-LV--PK----------------GIGPTTKTTLT 61 (92)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEE-EE--EC----------------CSSSEEEEEEC
T ss_pred cCcCCEEEEe--cCCEEEEEEEecCCcccceEEEEEEcCCCcceee-EE--Ee----------------cCCCeeEEEEC
Confidence 4655555544 358999999865432 23678875433211111 00 00 01234678999
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|+|.|.++|..
T Consensus 62 ~L~p~t~Y~~~V~a 75 (92)
T d1tdqa2 62 DLVPGTEYGVGISA 75 (92)
T ss_dssp SCCTTCEEEEEEEE
T ss_pred CccCCCEEEEEEEE
Confidence 99999999999965
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.17 E-value=0.02 Score=46.81 Aligned_cols=88 Identities=15% Similarity=0.098 Sum_probs=51.5
Q ss_pred cccCCCCCceeEEeeccCCCCceEEEEEeCCCC--------CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCc
Q 006591 209 NFANPKKPLYGHLSSVDSTGTSMRLTWVSGDKE--------PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGW 280 (639)
Q Consensus 209 ~~~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--------~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~ 280 (639)
....|..|.-+.+.......+++.|+|...... .-.++|...+...+... .
T Consensus 4 ~iVkP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~------~--------------- 62 (109)
T d1uc6a_ 4 GSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHV------E--------------- 62 (109)
T ss_dssp TSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCE------E---------------
T ss_pred CCEECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEe------c---------------
Confidence 334577887777775544568899999965321 12455553332211100 0
Q ss_pred cCCceEEEEEecCCCCCcEEEEEEccCC---C---ccceeeEEEC
Q 006591 281 HNPGYIHTAVMTGLQPSSTVSYRYGSEA---V---DWSDKIQFRT 319 (639)
Q Consensus 281 ~~~g~~h~a~l~gL~P~t~Y~Yrvg~~~---~---~~S~~~~F~T 319 (639)
.+.....+|.+|+|+|.|.+||...+ . .||....++|
T Consensus 63 --~~~~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 63 --LSNGTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp --ESSCSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred --cCCceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 01113567899999999999997521 1 3566666654
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.0097 Score=48.02 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=37.5
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC---C-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCc
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE---P-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPG 284 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~---~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g 284 (639)
|..|..+.+... ..+++.|+|...... . -.|+|...+....... .... ..+
T Consensus 2 P~~P~~l~v~~~--~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~--~~~~-----------------~~~ 60 (101)
T d1iarb2 2 PRAPGNLTVHTN--VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRI--YNVT-----------------YLE 60 (101)
T ss_dssp CCCCEEEEEC------CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEE--EEEC-----------------SSC
T ss_pred cccCCcCEEEEE--eCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeee--eeec-----------------cCc
Confidence 667876666544 357999999965321 1 2677764433221111 1100 012
Q ss_pred eEEEEEecCCCCCcEEEEEEcc
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....+.+.+|+|+|+|.+||..
T Consensus 61 ~~~~~~i~~L~p~t~Y~~rVrA 82 (101)
T d1iarb2 61 PSLRIAASTLKSGISYRARVRA 82 (101)
T ss_dssp CEEEECC-----CCCEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEE
Confidence 3356789999999999999974
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.029 Score=44.16 Aligned_cols=70 Identities=17% Similarity=0.192 Sum_probs=43.1
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|..+++.-. ..++++|.|.-.... . -.|+|...+.......... ++-...++|
T Consensus 3 d~P~~l~v~~~--s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~~~---------------------~~~~~~~~i 59 (90)
T d1tena_ 3 DAPSQIEVKDV--TDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDL---------------------TEDENQYSI 59 (90)
T ss_dssp CCCEEEEEESC--CSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEEE---------------------ETTCCEEEE
T ss_pred CCCCCcEEEEe--cCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEEEe---------------------cCCcceeeE
Confidence 35766666653 468999999854432 2 3778875443221111110 011235789
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
.||+|||+|.++|..
T Consensus 60 ~~L~p~t~Y~~~V~a 74 (90)
T d1tena_ 60 GNLKPDTEYEVSLIS 74 (90)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred eeecCCCEEEEEEEE
Confidence 999999999999975
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.019 Score=46.66 Aligned_cols=86 Identities=13% Similarity=0.224 Sum_probs=50.9
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--C----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--P----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
+..|.-+.+....+ .+++.|.|...... . -.|+|...+.......... +. .-
T Consensus 5 ~dPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~------------~~---------~~ 62 (105)
T d1erna2 5 LDAPVGLVARLADE-SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEI------------LE---------GR 62 (105)
T ss_dssp CCCCEEEEEEECCC--CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEEEE------------CT---------TC
T ss_pred cCCCCCCEEEEecC-CCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEEee------------cC---------Cc
Confidence 45777777776553 46799999864321 1 2677765433211100000 00 11
Q ss_pred EEEEecCCCCCcEEEEEEccC--C----C---ccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE--A----V---DWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~--~----~---~~S~~~~F~T~ 320 (639)
....|.+|+|+|+|.+||... + . .||...+++||
T Consensus 63 t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 63 TECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp CEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEECC
T ss_pred cEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeCc
Confidence 256799999999999999652 1 1 36777888875
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.016 Score=47.89 Aligned_cols=87 Identities=22% Similarity=0.270 Sum_probs=53.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCcc
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWH 281 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~ 281 (639)
|..|.-+++... .+++.|+|....... -.|+|...+..... ...-..
T Consensus 6 P~pP~nl~v~~~---~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~------------------ 63 (114)
T d2gysa2 6 PPEPRDLQISTD---QDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWED-AAILLS------------------ 63 (114)
T ss_dssp CCCCEEEEEEEE---TTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTT-CEEEEE------------------
T ss_pred CCcCCCeEEEEe---CCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEE-EEEeec------------------
Confidence 678887877653 368999998754311 24666644332110 000000
Q ss_pred CCceEEEEEecCCCCCcEEEEEEccC---C-------CccceeeEEECCCC
Q 006591 282 NPGYIHTAVMTGLQPSSTVSYRYGSE---A-------VDWSDKIQFRTPPA 322 (639)
Q Consensus 282 ~~g~~h~a~l~gL~P~t~Y~Yrvg~~---~-------~~~S~~~~F~T~P~ 322 (639)
...-..+.+.+|.|++.|..||... + ..||+...|+|+|.
T Consensus 64 -~~~~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 64 -NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp -SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred -cCceEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 0123367899999999999999652 1 14788899999874
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.96 E-value=0.0099 Score=48.40 Aligned_cols=82 Identities=18% Similarity=0.231 Sum_probs=49.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.... .+++.|+|....... -.|+|...+....... . . -..
T Consensus 11 P~~P~~l~v~~~s--~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~---~------------~---------~~~ 64 (103)
T d1x5ga1 11 PGPAPNLRAYAAS--PTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDV---D------------V---------SSH 64 (103)
T ss_dssp CCCCSSCEEEEEE--TTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCE---E------------E---------CSS
T ss_pred cccCCCcEEEEcc--CCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEE---e------------c---------ccc
Confidence 5667666665543 479999998533221 2567765443211000 0 0 012
Q ss_pred EEEecCCCCCcEEEEEEccC---C-CccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE---A-VDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~---~-~~~S~~~~F~T~ 320 (639)
..+|+||+|+|.|.++|..- + ..+|....++|.
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 65 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred EEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 46789999999999999642 1 236777778885
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.023 Score=46.09 Aligned_cols=72 Identities=13% Similarity=0.211 Sum_probs=44.8
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC---C----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK---E----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~---~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
|..|..+.+.......+++.|+|..... . .-.|+|...+...+. +.... +.
T Consensus 2 P~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~---~~~~~-------------------~~ 59 (104)
T d1n26a3 2 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFT---TWMVK-------------------DL 59 (104)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCE---EEECG-------------------GG
T ss_pred CcCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCcee---eeccc-------------------cc
Confidence 6678777777654456789999995432 1 136677654432221 11100 11
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....+|.+|+|++.|.+||..
T Consensus 60 ~~~~~i~~L~p~t~Y~~rVra 80 (104)
T d1n26a3 60 QHHCVIHDAWSGLRHVVQLRA 80 (104)
T ss_dssp CSEEEESSCCTTCCEEEEEEE
T ss_pred eEEEEECCCCCCCEEEEEEEE
Confidence 235678999999999999975
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.024 Score=44.46 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=44.4
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
+|..+++.... .++++|+|.-.... .-.|+|...+.... .... . .+ +-....+|+
T Consensus 3 aP~nl~v~~~~--~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~------~~~~-~-----~~---------~~~~~~~~~ 59 (89)
T d1fnha3 3 APSNLRFLATT--PNSLLVSWQPPRARITGYIIKYEKPGSPPR------EVVP-R-----PR---------PGVTEATIT 59 (89)
T ss_dssp CCEEEEEEEEE--TTEEEEEEECCSSCCSEEEEEEECTTSCCE------ECTT-C-----CC---------TTCCEEEEE
T ss_pred cCcCCEEEEec--CCEEEEEEeCCCcCCceEEEEEeeccCCcc------EEEE-E-----cC---------CCccEEEEE
Confidence 46555555443 57999999964432 23778875443211 0000 0 01 112357899
Q ss_pred CCCCCcEEEEEEccC-CCccce
Q 006591 293 GLQPSSTVSYRYGSE-AVDWSD 313 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~-~~~~S~ 313 (639)
||+||+.|.++|..- +.+.|+
T Consensus 60 ~L~p~t~Y~~~V~a~n~~g~S~ 81 (89)
T d1fnha3 60 GLEPGTEYTIYVIALKNNQKSE 81 (89)
T ss_dssp SCCTTCEEEEEEEEESSSCEEE
T ss_pred eeeCCCEEEEEEEEEcCCCEeC
Confidence 999999999999752 334444
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=95.79 E-value=0.032 Score=43.98 Aligned_cols=80 Identities=21% Similarity=0.333 Sum_probs=46.0
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
|..|..+..... ..+++.|.|.-.........|....... ... .. . . -..+++
T Consensus 4 P~~P~~l~~~~~--~~~sv~lsW~~p~~~~~i~~Y~i~~~~~--~~~--~~----------~---------~--t~~~~~ 56 (88)
T d1k85a_ 4 PTAPTNLASTAQ--TTSSITLSWTASTDNVGVTGYDVYNGTA--LAT--TV----------T---------G--TTATIS 56 (88)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECCSCCSSEEEEEEEESSS--EEE--EE----------S---------S--SEEEEC
T ss_pred cCCCCCcEEEEe--cCCEEEEEEeCCCCCCCEEEEEEEccce--EEE--ec----------C---------C--CEEEEC
Confidence 667866666543 3589999998544333455554211100 000 00 0 0 135789
Q ss_pred CCCCCcEEEEEEccC-C----CccceeeEEEC
Q 006591 293 GLQPSSTVSYRYGSE-A----VDWSDKIQFRT 319 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~-~----~~~S~~~~F~T 319 (639)
||+|+++|.|+|..- . ..+|...+++|
T Consensus 57 ~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 57 GLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 999999999999742 1 13566666665
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.64 E-value=0.025 Score=45.89 Aligned_cols=87 Identities=17% Similarity=0.205 Sum_probs=51.7
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC----C---cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE----P---QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~----~---~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+.+.... .+++.|.|...... . -.|+|...+....... .+. ....++...
T Consensus 11 pP~~v~v~~~~--~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~-~~~----------------~~~~~~~~~ 71 (109)
T d1va9a1 11 PPMDVTLQPVT--SQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV----------------EMKATGDSE 71 (109)
T ss_dssp CCEEEEEEECS--SSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BCC----------------BCCCCSSEE
T ss_pred CCcCcEEEEec--CCEEEEEEcCCCCCCCCCcEEEEEEEEeecccccccee-eee----------------EEecCCCee
Confidence 57777766543 58999999964221 1 2666764433211100 000 011123456
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~ 320 (639)
..+|++|+|+|.|.++|..-+ ..||....|+|.
T Consensus 72 ~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 72 VYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred EEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 778999999999999997521 247777777774
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.60 E-value=0.023 Score=45.90 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=42.6
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCC--CC---C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGD--KE---P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~--~~---~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
|..|..+.+.-. +.++++|.|.-.. +. . -.|+|...+...+... .. .+. ..
T Consensus 2 P~~P~~~~v~~~--~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~------~~------~~~---------~~ 58 (98)
T d1x5ya1 2 TSAPQHLTVEDV--TDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPA------NK------EPV---------ER 58 (98)
T ss_dssp CCCCEEEEEEEE--CSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEES------SS------SCB---------SS
T ss_pred CCCCcCcEEEEc--cCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEe------ee------ecC---------ce
Confidence 456766666543 3579999998432 11 2 3777875554322110 00 011 11
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...+++||+||+.|.|||..
T Consensus 59 ~~~~v~~L~~~~~Y~frV~A 78 (98)
T d1x5ya1 59 CGFTVKDLPTGARILFRVVG 78 (98)
T ss_dssp SEEEEECCCTTCCEEEEEEE
T ss_pred eEEEECCCcCCeEEEEEEEE
Confidence 25678999999999999975
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.55 E-value=0.063 Score=42.43 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=42.9
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.+|..+.+.... .++++|+|.-.... . -.|+|...+.... ...+.. + +....+++
T Consensus 5 ~~P~~l~v~~v~--~~si~v~W~~p~~~~~~y~i~~~~~~~~~~--~~~~~~----------~---------~~~~~~~i 61 (93)
T d1tdqa1 5 DGPTQILVRDVS--DTVAFVEWTPPRAKVDFILLKYGLVGGEGG--KTTFRL----------Q---------PPLSQYSV 61 (93)
T ss_dssp CCCEEEEEEEEC--SSCEEEEEECCSSCCSEEEEEEEESSSSCC--CEEEEE----------C---------TTCSEEEE
T ss_pred CcCCCCEEEEeC--CCEEEEEEEccccCCCceEEEEEeccCcce--eeEEEe----------C---------CCceEEEE
Confidence 467666666554 57999999854432 2 3677775443211 111111 0 11235689
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+|+++|..+|..
T Consensus 62 ~~L~p~t~Y~v~V~a 76 (93)
T d1tdqa1 62 QALRPGSRYEVSISA 76 (93)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred eCcccceEEEEEEEE
Confidence 999999999999975
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.41 E-value=0.032 Score=44.54 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=25.6
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~ 320 (639)
..+|+||+|+|.|.+||...+ ..||....++|.
T Consensus 62 ~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 62 SYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 467999999999999997522 247777777774
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.04 Score=43.16 Aligned_cols=69 Identities=13% Similarity=0.191 Sum_probs=42.0
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+.+.- -+.++++|.|...... . -.|+|...+.......... + +.....+|+
T Consensus 3 ~P~~l~v~~--vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~~v------------~---------~~~~~~~i~ 59 (89)
T d1fnfa3 3 SPTGIDFSD--ITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRV------------P---------HSRNSITLT 59 (89)
T ss_dssp CCEEEEEES--CCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEEEE------------E---------TTCCEEEEE
T ss_pred cCcCCEEEE--ecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEEEE------------C---------CCccEEEEC
Confidence 465555554 3468999999865432 2 3678875433221111110 0 112357899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
+|+|++.|.++|..
T Consensus 60 ~L~p~t~Y~~~V~a 73 (89)
T d1fnfa3 60 NLTPGTEYVVSIVA 73 (89)
T ss_dssp SCCTTCEEEEEEEE
T ss_pred CCcccCEEEEEEEE
Confidence 99999999999975
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=95.33 E-value=0.052 Score=42.31 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=41.9
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC-C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE-P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~-~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
+|..+++... +.+++.|+|...... . -.|+|...+.... .... + +.....+|+
T Consensus 2 aP~~l~v~~~--t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~----~~~~----------~---------~~~~~~~~~ 56 (87)
T d1qr4a1 2 NPKDLEVSDP--TETTLSLRWRRPVAKFDRYRLTYVSPSGKKN----EMEI----------P---------VDSTSFILR 56 (87)
T ss_dssp CCEEEEEESC--CSSEEEEEEECCSSCCSEEEEEEECTTCCEE----EEEE----------C---------TTCSEEEEE
T ss_pred cCcCcEEEEe--cCCEEEEEEECCCCCcceeEEEeecCCccee----EEeC----------C---------CCcCEEEEC
Confidence 4655665543 458999999965432 2 3788875443211 1100 1 112357899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|++.|.++|..
T Consensus 57 ~L~p~t~Y~v~V~a 70 (87)
T d1qr4a1 57 GLDAGTEYTISLVA 70 (87)
T ss_dssp SCCSSCEEEEEEEE
T ss_pred CCCcCCEEEEEEEE
Confidence 99999999999975
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.23 E-value=0.036 Score=46.53 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=46.7
Q ss_pred CCceEEEEEeCCCCC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEE
Q 006591 228 GTSMRLTWVSGDKEP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYR 303 (639)
Q Consensus 228 ~~sm~v~W~T~~~~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yr 303 (639)
.++++|+|.-..... -.|.|...+..... ..+...+.- .+.....+|.||+|+|.|.+|
T Consensus 29 ~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~--~~~~~~~v~---------------~~~~~s~~i~~L~p~t~Y~f~ 91 (120)
T d1ujta_ 29 PTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQAT--SSWQNLDAK---------------VPTERSAVLVNLKKGVTYEIK 91 (120)
T ss_dssp TTEEEEEEEESSCCSSCCEEEEEEEESSSSSTT--TCCEEEECC---------------CTTCCEEEEESCCSSEEEEEE
T ss_pred CCeEEEEecCCCCCCcEEEEEEEeeecccCCCC--cceEEEEec---------------cCceeEEEECCCCCCCEEEEE
Confidence 589999999654322 36777644322110 011111000 012335689999999999999
Q ss_pred EccC----CCccceeeEEECCCCC
Q 006591 304 YGSE----AVDWSDKIQFRTPPAG 323 (639)
Q Consensus 304 vg~~----~~~~S~~~~F~T~P~~ 323 (639)
|..- ...+|+...|+|.+..
T Consensus 92 V~A~n~~G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 92 VRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp EEEESSSCCCCCCCCEEEEECSSC
T ss_pred EEEEeCCcCcCCCCCEEEEeCCCC
Confidence 8642 1236778889998753
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.23 E-value=0.027 Score=45.79 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=27.0
Q ss_pred eEEEEEecCCCCCcEEEEEEccC---C----CccceeeEEECC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSE---A----VDWSDKIQFRTP 320 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~---~----~~~S~~~~F~T~ 320 (639)
-.+..+|++|+|+|.|.+||..- + ..||...+++|.
T Consensus 62 ~~~~~~i~~L~p~t~Y~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 62 EALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp CEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred CcceeEEecccCCeEEEEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 44667899999999999999641 1 147777777763
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.20 E-value=0.088 Score=41.25 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=41.8
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC--CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK--EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~--~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+++.-.. .++++|.|.-... ..-.|+|...+..... ... + + +-.....|+
T Consensus 4 pP~~l~v~~~~--~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~-~~~-----~-------~---------~~~~~~~i~ 59 (90)
T d1fnha2 4 PPRRARVTDAT--ETTITISWRTKTETITGFQVDAVPANGQTPI-QRT-----I-------K---------PDVRSYTIT 59 (90)
T ss_dssp CCEEEEEEEEC--SSEEEEEEECCSSCCCCEEEEEEESSSSCCE-EEE-----C-------C---------TTCSEEEEE
T ss_pred cCCCCEEEEec--CCEEEEEEECCCCCCceeEEEEEEccCCceE-EEe-----c-------C---------CCccEEEeC
Confidence 56667766543 5899999985433 2337778754332110 000 0 0 111356899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|||.|.++|..
T Consensus 60 ~L~p~t~Y~~~V~a 73 (90)
T d1fnha2 60 GLQPGTDYKIYLYT 73 (90)
T ss_dssp SCCTTCEEEEEEEE
T ss_pred CCCCCcEEEEEEEE
Confidence 99999999999975
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.18 E-value=0.035 Score=45.13 Aligned_cols=71 Identities=17% Similarity=0.242 Sum_probs=41.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++.-. ..+++.|.|....... -.|+|...+......... .++-..
T Consensus 11 P~~p~~l~~~~~--~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~~---------------------~~~~~~ 67 (106)
T d1wfna1 11 PGPVGHLSFSEI--LDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHY---------------------LPNVTL 67 (106)
T ss_dssp CCCCSCCEEESC--CSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCEE---------------------ECSSCC
T ss_pred CcCCCCcEEEEe--cCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEEe---------------------cCCCee
Confidence 566766665543 3579999998543221 256666433221100000 011223
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|+||+|++.|.++|..
T Consensus 68 ~~~i~~L~p~t~Y~~~V~A 86 (106)
T d1wfna1 68 EYRVTGLTALTTYTIEVAA 86 (106)
T ss_dssp EEEEESCCTTCEEEEEEEE
T ss_pred EEEEccCCCCCEEEEEEEE
Confidence 5688999999999999974
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.15 E-value=0.066 Score=41.90 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=41.6
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+++.- -..+++.|.|...... . -.|+|...+.......... + +....++|
T Consensus 3 pP~~l~~~~--~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~~------------~---------~~~~~~~i 59 (91)
T d1fnfa2 3 PPTDLRFTN--IGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSI------------S---------PSDNAVVL 59 (91)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEEEE------------C---------TTCCEEEE
T ss_pred cCCceEEEE--eCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEEEe------------C---------CCceEEEE
Confidence 365555554 3468999999865432 2 2778875443221111000 0 11235789
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+|+|.|.++|..
T Consensus 60 ~~L~p~t~Y~~~V~a 74 (91)
T d1fnfa2 60 TNLLPGTEYVVSVSS 74 (91)
T ss_dssp CSCCTTCEEEEEEEE
T ss_pred eceeCCCEEEEEEEE
Confidence 999999999999975
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.14 E-value=0.022 Score=46.78 Aligned_cols=86 Identities=15% Similarity=0.066 Sum_probs=49.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
+..|.-+.... +.++++|.|.-.... . -.|+|...+.. +.. +... . + +..+
T Consensus 8 ~sPP~~~~~~~---t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~---~~~~--~------~---------~~~~ 63 (108)
T d1v5ja_ 8 LSPPRGLVAVR---TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEV---LDPA--V------A---------GTET 63 (108)
T ss_dssp CCCCEEEEEEE---CSSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEE---EEEE--E------C---------SSCC
T ss_pred CCcCCCeEEEE---cCCEEEEEEEecccCCCceeEEEEEeeeeeee-eee---cccc--c------c---------ceee
Confidence 44566665544 347899999853321 1 26778744322 111 1110 0 1 1224
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~ 322 (639)
.++++||+|++.|.|||..-+ . .+|....++|+..
T Consensus 64 ~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 64 ELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCC
Confidence 678999999999999997422 2 3566667777543
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.10 E-value=0.033 Score=45.92 Aligned_cols=84 Identities=19% Similarity=0.173 Sum_probs=50.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+++..+ .+++.|.|.-.... .-.|+|+..+.... .... + +...
T Consensus 21 P~~P~~~~~~~~---~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~~------~~~~--------~---------~~~~ 74 (113)
T d1x5ia1 21 PEVPSSLHVRPL---VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQ------TIKV--------D---------YKQR 74 (113)
T ss_dssp CCSCSEEEEEEE---TTEEEEEEECCSCTTBCCCEEEEEECSSCGGGE------EEEC--------C---------TTCC
T ss_pred CCCCEeeeeeeC---CCEEEEEEEccccCCccEEEEEEEeeeccccce------eeee--------e---------CCcc
Confidence 567877777653 36899999944322 12677764332111 0000 0 1123
Q ss_pred EEEecCCCCCcEEEEEEccC-CCccce--eeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVDWSD--KIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P~ 322 (639)
..+|.+|+|++.|.++|..- ..|+|+ ...++|.|.
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 75 YYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp EEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred EEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 56799999999999999753 334553 355777764
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.09 E-value=0.078 Score=41.73 Aligned_cols=82 Identities=20% Similarity=0.218 Sum_probs=47.3
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+.+.- -..++++|+|...... .-.|+|...+.... .... + +.....+|+
T Consensus 4 ~P~~l~~~~--~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~--~~~~------------~---------~~~~~~~i~ 58 (93)
T d2cuma1 4 APRDLEAKE--VTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQ--EILL------------P---------GGITSHQLL 58 (93)
T ss_dssp CCEEEEEES--CCSSCEEEEEECCSSCCSEEEEEEECTTSCEE--EEEE------------C---------SSCSEEEEC
T ss_pred cCCCCEEEE--eCCCEEEEEEEccccccccEEEEEEccccccE--EEEE------------C---------CCccEEEEe
Confidence 454444443 3468999999865432 23778875432211 1000 0 111256899
Q ss_pred CCCCCcEEEEEEccC-CCccce--eeEEECCC
Q 006591 293 GLQPSSTVSYRYGSE-AVDWSD--KIQFRTPP 321 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~~-~~~~S~--~~~F~T~P 321 (639)
||+|||.|.++|..- +.+.|+ ...|+|..
T Consensus 59 ~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 59 GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGG 90 (93)
T ss_dssp SCCTTCEEEEEEEEEBTTBCCCCEEEEEECCC
T ss_pred CccCCCEEEEEEEEEeCCCCCCCEEEEEEeCC
Confidence 999999999999752 234443 34577743
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.09 E-value=0.08 Score=41.27 Aligned_cols=68 Identities=18% Similarity=0.177 Sum_probs=40.4
Q ss_pred CceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecC
Q 006591 216 PLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTG 293 (639)
Q Consensus 216 P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~g 293 (639)
|..+.+.-. +.++++|.|...... ...++|............. . +. -.-..+|+|
T Consensus 3 P~~l~~~~v--~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~--~----------~~---------~~~~~~i~~ 59 (90)
T d1fnha1 3 PTDLKFTQV--TPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEIN--L----------AP---------DSSSVVVSG 59 (90)
T ss_dssp CEEEEEEEE--CSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEEE--E----------CT---------TCCEEEECS
T ss_pred CCCEEEEEe--cCCEEEEEEEccceeccceEEEEEeeeCCCceEEEE--e----------CC---------CCeEEEEec
Confidence 555555544 458999999865432 3367776433221111100 0 11 112578999
Q ss_pred CCCCcEEEEEEcc
Q 006591 294 LQPSSTVSYRYGS 306 (639)
Q Consensus 294 L~P~t~Y~Yrvg~ 306 (639)
|+|||+|.++|..
T Consensus 60 L~p~t~Y~~~V~a 72 (90)
T d1fnha1 60 LMVATKYEVSVYA 72 (90)
T ss_dssp CCTTCEEEEEEEE
T ss_pred ccCceEEEEEEEE
Confidence 9999999999975
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.05 E-value=0.06 Score=43.57 Aligned_cols=85 Identities=15% Similarity=0.335 Sum_probs=49.5
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCCC-Cc----EEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceE
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDKE-PQ----QVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYI 286 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-~~----~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~ 286 (639)
-|..|..+.+.... .++++|+|.-.... .. .|+|........ ...... +.-
T Consensus 10 ~P~~P~~~~~~~~~--~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~-~~~~~~---------------------~~~ 65 (105)
T d1x3da1 10 EPDIPNPPRIANRT--KNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGE-FCQCYM---------------------GSQ 65 (105)
T ss_dssp CCCCCCCCEEEEEE--TTEEEEECCCCCCCSSCEEEEEEEECTTTSSSC-CEEEEE---------------------ESC
T ss_pred CCcCCCCCEEEEcc--CCEEEEEEECCCCCcCccEEEEEEEecCCCcce-eEEEec---------------------CCc
Confidence 35567777776543 47999999854432 22 344442221110 000000 111
Q ss_pred EEEEecCCCCCcEEEEEEccC---C-CccceeeEEECC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE---A-VDWSDKIQFRTP 320 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~---~-~~~S~~~~F~T~ 320 (639)
...++.+|+|+++|.+||..- + ..||+...|+|.
T Consensus 66 ~~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 66 KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred cEEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 245788999999999999742 1 247888888885
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.04 E-value=0.07 Score=43.34 Aligned_cols=23 Identities=35% Similarity=0.447 Sum_probs=19.6
Q ss_pred ceEEEEEecCCCCCcEEEEEEcc
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
+.-...+|+||+|+|+|.+||..
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEE
T ss_pred cceeEEEECCCcCCcEEEEEEEE
Confidence 44567799999999999999975
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.04 E-value=0.03 Score=46.60 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=28.1
Q ss_pred EEEEecCCCCCcEEEEEEccC-C---CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSE-A---VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~-~---~~~S~~~~F~T~P~ 322 (639)
...+|+||+|+|.|.++|..- . ..||....|+|.+.
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 70 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 467899999999999999642 1 13788889999754
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.99 E-value=0.026 Score=46.15 Aligned_cols=76 Identities=20% Similarity=0.149 Sum_probs=42.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+... ..++++|.|.-.... .-.|+|.................. ..+...
T Consensus 11 P~~P~~~~~~~~--~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 72 (111)
T d1wisa1 11 PGPPTNLGISNI--GPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS----------------NEPDAR 72 (111)
T ss_dssp CCCCEEEEEESC--CSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE----------------SCTTCS
T ss_pred CcCCCCCEEEEc--CCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeee----------------ccccee
Confidence 567776666543 458999999854321 126667643322211111111000 001122
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...|+||+|++.|.+||..
T Consensus 73 ~~~v~~L~p~t~Y~frV~A 91 (111)
T d1wisa1 73 SMEVPDLNPFTCYSFRMRQ 91 (111)
T ss_dssp EEEECSCCTTSEECCCCEE
T ss_pred EEEeCCCCCCCEEEEEEEE
Confidence 4678999999999999975
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.97 E-value=0.027 Score=45.19 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=42.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAV 290 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~ 290 (639)
|..|..+++.-. +.++++|.|...... .-.|+|............. .. +... ...++......
T Consensus 4 Pp~~~~l~v~~~--t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~------~~-----~~~~--~~~~~~~~~~~ 68 (101)
T d2cuia1 4 RPRLSQLSVTDV--TTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPR------PL-----LQRE--LMVPGTRHSAV 68 (101)
T ss_dssp CCCCCCCEEESC--CSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSS------CC-----CCEE--EEEETTCCEEE
T ss_pred ccCCCCcEEEEE--CCCEEEEEEEeccccccceEEEEEecCCCceeeccC------Cc-----ceeE--eecccceeEEE
Confidence 445655666554 458999999754332 2477777443221100000 00 0000 00012234568
Q ss_pred ecCCCCCcEEEEEEcc
Q 006591 291 MTGLQPSSTVSYRYGS 306 (639)
Q Consensus 291 l~gL~P~t~Y~Yrvg~ 306 (639)
|.||+|++.|.++|..
T Consensus 69 v~~L~p~t~Y~~~V~a 84 (101)
T d2cuia1 69 LRDLRSGTLYSLTLYG 84 (101)
T ss_dssp ECSCCTTCEEEEEEEE
T ss_pred eCCCCcCCEEEEEEEE
Confidence 8999999999999975
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=94.90 E-value=0.087 Score=41.12 Aligned_cols=68 Identities=19% Similarity=0.195 Sum_probs=41.2
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+.+.-. ..+++.|+|...... .-.|+|...+.... ...++. +....++++
T Consensus 3 ~P~~l~v~~v--~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~-~~~~~~---------------------~~~~~~~i~ 58 (88)
T d1qr4a2 3 SPKGISFSDI--TENSATVSWTPPRSRVDSYRVSYVPITGGTP-NVVTVD---------------------GSKTRTKLV 58 (88)
T ss_dssp CCSCEEEESC--CSSCEEEEECCCSSCCSEEEEEEEETTCCCC-EEEEEE---------------------TTCCEEEEC
T ss_pred CCcceEEEEe--cCCEEEEEEEcccEeeceEEEEEEeccCCce-EEEEec---------------------CCccEEEEC
Confidence 4555555544 458999999855432 23777875433211 111110 111357899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|+|+|.++|..
T Consensus 59 ~L~p~t~Y~~~V~a 72 (88)
T d1qr4a2 59 KLVPGVDYNVNIIS 72 (88)
T ss_dssp SCCSSCEEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999975
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=94.86 E-value=0.064 Score=42.91 Aligned_cols=71 Identities=8% Similarity=0.276 Sum_probs=41.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+... .++++|+|.-.... .-.|+|...+........ .... +. .+
T Consensus 6 P~~P~~~~v~~~---~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~--------~~----------~~ 62 (100)
T d1cfba1 6 PNAPKLTGITCQ---ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAA--YEKV--------PN----------TD 62 (100)
T ss_dssp CCCCEEEEEEEC---SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEE--EEEE--------ET----------TC
T ss_pred CCcCcCcEEEEc---CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEE--eeec--------CC----------ce
Confidence 678877777653 36899999854321 126777644332111100 0000 00 12
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...+++|+|++.|.+||..
T Consensus 63 ~~~~~~L~p~t~Y~frV~A 81 (100)
T d1cfba1 63 SSFVVQMSPWANYTFRVIA 81 (100)
T ss_dssp SEEEEECCSSEEEEEEEEE
T ss_pred EEEEecCCCCCEEEEEEEE
Confidence 3467899999999999975
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.78 E-value=0.017 Score=46.66 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=41.3
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|.-+.+.... .+++.|.|.-..... -.|+|.................. ...-..
T Consensus 3 P~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 64 (103)
T d1qg3a2 3 PSEPGRLAFNVVS--STVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLV----------------DNPKNR 64 (103)
T ss_dssp CCCCCCCEEEEEE--TTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEE----------------CCTTCC
T ss_pred CccCCCcEEEEec--CCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEe----------------cCCCce
Confidence 4566666665543 479999998543221 25666543322110000000000 001123
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
.++++||+|++.|.+||..
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A 83 (103)
T d1qg3a2 65 MLLIENLRESQPYRYTVKA 83 (103)
T ss_dssp EEEECCCCTTCCEEEEEEE
T ss_pred EEEEeecCCCCEEEEEEEE
Confidence 5789999999999999975
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.73 E-value=0.044 Score=44.92 Aligned_cols=75 Identities=23% Similarity=0.291 Sum_probs=42.4
Q ss_pred cCCCCCceeEEeeccCCCCceEEEEEeCCC-CC----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDK-EP----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 211 ~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~~----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
+-|..|..+.+.-. ..+++.|+|.-... .. -.|+|...+....- ...... . + +.
T Consensus 9 ~pP~~P~~~~v~~~--~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~--~~~~~~-----~---~---------~~ 67 (108)
T d1x4za1 9 SPPEAPDRPTISTA--SETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDW--ILATSA-----I---P---------PS 67 (108)
T ss_dssp CCCCCCCCCEEEEC--CSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCC--EEEEEE-----E---C---------TT
T ss_pred CCCccCCCCEEEEc--cCCEEEEEEECCCCCCCccEEEEEEEEecCCCCce--EEEEEe-----e---c---------CC
Confidence 34667766666543 35799999963322 11 26777643322110 001000 0 0 11
Q ss_pred EEEEEecCCCCCcEEEEEEcc
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....+++||+|++.|.+||..
T Consensus 68 ~~~~~v~~L~p~t~Y~frV~A 88 (108)
T d1x4za1 68 RLSVEITGLEKGISYKFRVRA 88 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEE
Confidence 234678999999999999975
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.66 E-value=0.07 Score=42.21 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=40.6
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC-----C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE-----P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~-----~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
.|..+.+... ..+++.|.|...... . -.|+|+..+....-. ..... .+..+.
T Consensus 9 ~P~~~~v~~~--s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~--~~~~~------------------~~~~~~ 66 (95)
T d2ibga1 9 VPELLEIEEY--SETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYF--KATIE------------------GAHARS 66 (95)
T ss_dssp CCEECCCBCC--SSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCE--EEEEE------------------CTTCCE
T ss_pred CCcCeEEEEe--CCCEEEEEEEeeeeccCCcccccceeEeeeeecceee--eeecc------------------CCceeE
Confidence 4655554443 458999999853221 1 267887543321100 00000 012245
Q ss_pred EEecCCCCCcEEEEEEcc
Q 006591 289 AVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~ 306 (639)
.+|+||+|+|.|.+||..
T Consensus 67 ~~i~~L~p~t~Y~~~V~A 84 (95)
T d2ibga1 67 FKIAPLETATMYEFKLQS 84 (95)
T ss_dssp EEECSCCTTCEEEEEEEE
T ss_pred EEEeeccCCeEEEEEEEE
Confidence 789999999999999975
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.62 E-value=0.12 Score=41.06 Aligned_cols=83 Identities=11% Similarity=0.050 Sum_probs=46.5
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+++....+ .++++|.|...... . -.|+|........ ....... ++....++|
T Consensus 4 PP~~l~v~~~~~-ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~-~~~~~~~-------------------~~~~~~~~i 62 (94)
T d1fnfa1 4 PPTNLHLEANPD-TGVLTVSWERSTTPDITGYRITTTPTNGQQG-NSLEEVV-------------------HADQSSCTF 62 (94)
T ss_dssp CCEEEEEEECSS-SSCEEEEEECCSCSSCCEEEEEEEETTTCSS-CCEEEEE-------------------CTTCCEEEC
T ss_pred cCcCcEEEEecC-CCEEEEEeeCCCCCCeeEEEEEEEEecccCc-eEEEEEe-------------------CCCccEEEE
Confidence 466677664332 35689999854332 2 3677874332211 1111000 112246899
Q ss_pred cCCCCCcEEEEEEcc-CCCccceeeEEE
Q 006591 292 TGLQPSSTVSYRYGS-EAVDWSDKIQFR 318 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~-~~~~~S~~~~F~ 318 (639)
+||+|||.|..+|.. .+.+.|...+.+
T Consensus 63 ~~L~p~t~Y~v~V~a~~~~g~s~p~s~t 90 (94)
T d1fnfa1 63 DNLSPGLEYNVSVYTVKDDKESVPISDT 90 (94)
T ss_dssp CCCCTTSCEEEEEEEEETTEECCCEEEE
T ss_pred CCCCCCCEEEEEEEEEcCCCEeCCEEEE
Confidence 999999999999975 233455444443
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.59 E-value=0.018 Score=48.50 Aligned_cols=102 Identities=7% Similarity=0.044 Sum_probs=54.0
Q ss_pred CCCCCceeEEeeccCCCCceEEEEEeCCC-----CCcEEEEecCCCccccee-eeeeccccccCCCCCCCCCCCccCCce
Q 006591 212 NPKKPLYGHLSSVDSTGTSMRLTWVSGDK-----EPQQVEYGDDGKTQTSEV-STFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 212 ~~~~P~~~~l~~~~~~~~sm~v~W~T~~~-----~~~~V~yg~~g~~~~~~~-~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.|..|..+.+.. ..+++.|+|.-... ..-.|+|...+....... ........++ +... ....+.
T Consensus 7 ~P~aP~~v~v~~---~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~ 76 (123)
T d1wfta_ 7 GPGAPSTVRISK---NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCG-----LKTS--CTVTAG 76 (123)
T ss_dssp CCCCCEEEEEEE---CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEE-----SCSE--EEEEHH
T ss_pred CCcCCcccEEEe---CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecC-----Ccee--EeecCC
Confidence 467887777654 24789999994332 123778875443211100 0000001111 0000 000011
Q ss_pred EEEEEecCCCCCcEEEEEEccCC-C---ccceeeEEECCCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTPPAG 323 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~P~~ 323 (639)
.-..++.+|+|++.|.+||..-+ . .+|+...|+|....
T Consensus 77 ~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 77 QLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp HHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCS
T ss_pred ccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCC
Confidence 11236789999999999997532 2 36777889886543
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.57 E-value=0.048 Score=44.41 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=25.0
Q ss_pred EEEEEecCCCCCcEEEEEEccC---CC----ccceeeEEEC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE---AV----DWSDKIQFRT 319 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~---~~----~~S~~~~F~T 319 (639)
.+..+|++|.|+|.|.+||..- +. .||...+|+|
T Consensus 64 ~~~~~l~~L~p~t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 64 KDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp EEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred ceEEEEeccCCCeEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 4567899999999999999642 11 3566677765
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.54 E-value=0.038 Score=43.83 Aligned_cols=69 Identities=13% Similarity=0.088 Sum_probs=40.1
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
.|..+.+.- -..+++.|.|...... . -.|+|...+......... . + +.....+|
T Consensus 8 ~P~~l~v~~--~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~---------~---~---------~~~t~~~i 64 (95)
T d2fnba_ 8 QLTDLSFVD--ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDF---------V---D---------SSVGYYTV 64 (95)
T ss_dssp CCTTCEEEC--CCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEEEE---------C---C---------SSCSEEEE
T ss_pred cCCCeEEEE--EcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEEEE---------e---C---------CCCeEEEE
Confidence 455555544 3468999999854332 1 267776443321111000 0 1 11235689
Q ss_pred cCCCCCcEEEEEEcc
Q 006591 292 TGLQPSSTVSYRYGS 306 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~ 306 (639)
+||+||+.|.++|..
T Consensus 65 ~~L~p~t~Y~~~V~a 79 (95)
T d2fnba_ 65 TGLEPGIDYDISVIT 79 (95)
T ss_dssp CCCCTTSEEEEEEEE
T ss_pred ecccCCEEEEEEEEE
Confidence 999999999999975
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.50 E-value=0.14 Score=42.69 Aligned_cols=90 Identities=21% Similarity=0.231 Sum_probs=49.9
Q ss_pred cCCCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCce
Q 006591 211 ANPKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGY 285 (639)
Q Consensus 211 ~~~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~ 285 (639)
.-|..|..+++.... .+++.|.|.-..... -.++|...+........... ...
T Consensus 15 d~P~~P~~~~v~~~~--~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 72 (127)
T d1ueya_ 15 DVPNPPFDLELTDQL--DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE--------------------VSG 72 (127)
T ss_dssp CSCCCCEEEEEECCS--SSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE--------------------EES
T ss_pred ccCcCCCCcEEEEec--CCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEee--------------------cCC
Confidence 357778777776544 479999998554322 24555533322111000000 011
Q ss_pred EEEEEecCCCCCcEEEEEEccC-CC---cccee-eEEECCCC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGSE-AV---DWSDK-IQFRTPPA 322 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~~-~~---~~S~~-~~F~T~P~ 322 (639)
.+...+.+|+|++.|.+||..- .. .+|.. ..|+|.+.
T Consensus 73 ~~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 73 TQTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp SCCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred ceEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 2245688999999999999642 12 24433 44666654
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.42 E-value=0.044 Score=44.75 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=24.5
Q ss_pred EEEecCCCCCcEEEEEEcc---CC---CccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGS---EA---VDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~---~~---~~~S~~~~F~T~ 320 (639)
..+|++|+|++.|.+||.. ++ ..||+...++++
T Consensus 66 ~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 66 SVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp EEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred eEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECC
Confidence 6789999999999999965 22 246666666654
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.41 E-value=0.099 Score=41.07 Aligned_cols=83 Identities=22% Similarity=0.220 Sum_probs=46.9
Q ss_pred CCCceeEEeeccCCCCceEEEEEeCCC--CCcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEe
Q 006591 214 KKPLYGHLSSVDSTGTSMRLTWVSGDK--EPQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVM 291 (639)
Q Consensus 214 ~~P~~~~l~~~~~~~~sm~v~W~T~~~--~~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l 291 (639)
..|..+.+.-.. .++++|.|.-... ..-.++|........ ... .. . .+.....++
T Consensus 3 d~P~~l~v~~vt--~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~----~~~-~~--------~--------~~~~~~~~i 59 (94)
T d1j8ka_ 3 DRPKGLAFTDVD--VDSIKIAWESPQGQVSRYRVTYSSPEDGIH----ELF-PA--------P--------DGEEDTAEL 59 (94)
T ss_dssp CCCCCCEEEEEE--TTEEEEECCCCSSCCSCEEEEEEETTTEEE----EEC-CC--------C--------CSSCCEEEE
T ss_pred CCCCCCEEEEec--CCEEEEEEeCCCccccceEEEEEeecCCCc----eEE-Ee--------c--------CCCccEEEE
Confidence 356666655433 5799999985432 234777775433211 000 00 0 012235789
Q ss_pred cCCCCCcEEEEEEccC-CCcccee--eEEEC
Q 006591 292 TGLQPSSTVSYRYGSE-AVDWSDK--IQFRT 319 (639)
Q Consensus 292 ~gL~P~t~Y~Yrvg~~-~~~~S~~--~~F~T 319 (639)
+||+|||.|.++|..- +.+.|.. ..++|
T Consensus 60 ~~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 60 QGLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp CSCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred CCCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 9999999999999653 2344433 34555
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.34 E-value=0.083 Score=43.51 Aligned_cols=86 Identities=20% Similarity=0.245 Sum_probs=48.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC-----cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP-----QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~-----~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.... .+++.|.|....... -.|+|...+....... .... . +...
T Consensus 21 P~~P~~~~~~~~~--~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~--~~~~---------~---------~~~~ 78 (117)
T d1wfoa1 21 PGPPMGILFPEVR--TTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTAT--VEVL---------A---------PSAR 78 (117)
T ss_dssp CCCCCCCEEEEEC--SSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCC--EEEE---------C---------TTCC
T ss_pred CcCCCCcEEEEec--CCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEe--EEec---------C---------CceE
Confidence 6677666666543 479999998433211 2577764433221100 0000 0 1112
Q ss_pred EEEecCCCCCcEEEEEEccCC-C---ccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA-V---DWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~-~---~~S~~~~F~T~ 320 (639)
...++||+|+|.|.+||..-+ . .+|+...++|.
T Consensus 79 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 79 QYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTE 115 (117)
T ss_dssp EEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEECC
Confidence 457899999999999997532 2 25566666663
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.32 E-value=0.11 Score=40.32 Aligned_cols=67 Identities=13% Similarity=0.201 Sum_probs=41.9
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEec
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMT 292 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~ 292 (639)
.|..+.+... ..+++.|.|...... .-.|+|...+.... ..... + ..-.++|+
T Consensus 3 ~P~nl~v~~~--~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~----~~~~~---------~----------~~~~~~~~ 57 (86)
T d1tdqa3 3 SPRDLMVTAS--SETSISLIWTKASGPIDHYRITFTPSSGISS----EVTVP---------R----------DRTSYTLT 57 (86)
T ss_dssp CCEEEEEEEE--CSSCEEEEEECCCSCCSEEEEEEECSSSCCE----EEEEE---------S----------SCSEEEEC
T ss_pred cCCCCEEEEe--cCCEEEEEEeCCCCCccceEEEEecccccce----EEEeC---------C----------CccEEEEC
Confidence 4665666654 357999999875543 23788875443211 00000 0 11257899
Q ss_pred CCCCCcEEEEEEcc
Q 006591 293 GLQPSSTVSYRYGS 306 (639)
Q Consensus 293 gL~P~t~Y~Yrvg~ 306 (639)
||+|||.|.++|..
T Consensus 58 ~L~p~t~Y~v~V~a 71 (86)
T d1tdqa3 58 DLEPGAEYIISITA 71 (86)
T ss_dssp CCCTTCCEEEEEEE
T ss_pred CCccccEEEEEEEE
Confidence 99999999999975
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.31 E-value=0.047 Score=42.98 Aligned_cols=59 Identities=27% Similarity=0.469 Sum_probs=36.3
Q ss_pred CCCceEEEEEeCCCC--CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEEEEE
Q 006591 227 TGTSMRLTWVSGDKE--PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVSYRY 304 (639)
Q Consensus 227 ~~~sm~v~W~T~~~~--~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~Yrv 304 (639)
+.++++|.|...... .-.|+|...+..... ..... + +-...++|+||+||+.|.++|
T Consensus 9 t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~--~~~~~----------~---------~~~t~~~l~~L~p~t~Y~~~V 67 (91)
T d1fnaa_ 9 TPTSLLISWDAPAVTVRYYRITYGETGGNSPV--QEFTV----------P---------GSKSTATISGLKPGVDYTITV 67 (91)
T ss_dssp CSSCEEEECCCCSSCCSEEEEEEEETTCCSCC--EEEEE----------E---------TTCCEEEECSCCTTCEEEEEE
T ss_pred CCCEEEEEEEccceEecEEEEEEEcCCCCcee--EEEEe----------C---------CCccEEEeCCCCCCCEEEEEE
Confidence 458999999854432 237788754432211 11110 0 111257899999999999999
Q ss_pred cc
Q 006591 305 GS 306 (639)
Q Consensus 305 g~ 306 (639)
..
T Consensus 68 ~a 69 (91)
T d1fnaa_ 68 YA 69 (91)
T ss_dssp EE
T ss_pred EE
Confidence 75
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.19 E-value=0.17 Score=39.70 Aligned_cols=58 Identities=16% Similarity=0.258 Sum_probs=35.1
Q ss_pred CCCceEEEEEeCCCC-----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEEEEecCCCCCcEEE
Q 006591 227 TGTSMRLTWVSGDKE-----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHTAVMTGLQPSSTVS 301 (639)
Q Consensus 227 ~~~sm~v~W~T~~~~-----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~a~l~gL~P~t~Y~ 301 (639)
..+++.|.|.-.... .-.|+|...+..... ..... ......+|+||+|++.|.
T Consensus 12 ~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~-~~~~~---------------------~~~~~~~i~~L~p~t~Y~ 69 (94)
T d2dn7a1 12 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPN-TIDFG---------------------KDDQHFTVTGLHKGTTYI 69 (94)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCE-EEEEE---------------------TTCCEEEEECCCTTCEEE
T ss_pred eCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcE-EEEcC---------------------CCccEEEEEccCCeeEEE
Confidence 457899999954321 126777754433221 11110 011245789999999999
Q ss_pred EEEcc
Q 006591 302 YRYGS 306 (639)
Q Consensus 302 Yrvg~ 306 (639)
+||..
T Consensus 70 ~~V~A 74 (94)
T d2dn7a1 70 FRLAA 74 (94)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.03 E-value=0.054 Score=44.98 Aligned_cols=36 Identities=22% Similarity=0.249 Sum_probs=29.0
Q ss_pred EEEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 287 HTAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..++|.+|+|+|.|.+||..-+ ..||....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 4688999999999999997522 24788899999764
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.88 E-value=0.061 Score=44.55 Aligned_cols=86 Identities=16% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCC-C---C-cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDK-E---P-QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~-~---~-~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+.+.... .++++|+|.-... . . -.|+|....... .+.... .. . ...
T Consensus 16 P~pP~~~~v~~~~--~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~-----~~~~~~-~~-----~----------~~~ 72 (117)
T d1uema_ 16 PGPPSKPQVTDVT--KNSVTLSWQPGTPGTLPASAYIIEAFSQSVSN-----SWQTVA-NH-----V----------KTT 72 (117)
T ss_dssp CBCCCCCEEEEEC--SSCEEEECCCCBCSSSCCCEEEEEEEETTTEE-----EEEEEE-EE-----E----------CSS
T ss_pred CcCCCCCEEEEcc--CCEEEEEEECCCcCCCCeEEEEEEEeccCCce-----eeEEec-cc-----c----------ccc
Confidence 5567666665433 4789999974322 1 1 266666433221 111000 00 0 012
Q ss_pred EEEecCCCCCcEEEEEEccC-CCc---cceee-EEECCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE-AVD---WSDKI-QFRTPP 321 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~-~~~---~S~~~-~F~T~P 321 (639)
..+|+||+|+|.|.+||..- ..| ||+.- .++|.+
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~s~~v~t~~ 111 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQD 111 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCC
T ss_pred cceECCCCCCCEEEEEEEEEeCCcCCCCcCCCcCEEeCC
Confidence 45789999999999999753 233 34332 356654
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.83 E-value=0.073 Score=45.24 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=28.0
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
.++|+||+|+|.|.+||...+ ..+|+...|+|++.
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 578999999999999997521 24788888999754
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.82 E-value=0.033 Score=46.42 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=27.4
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECCCC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTPPA 322 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~P~ 322 (639)
..+|++|+|+|.|.+||..-+ ..||+...|+|.+.
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 457899999999999997632 24778888998654
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.77 E-value=0.056 Score=43.81 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=24.9
Q ss_pred EEEecCCCCCcEEEEEEccCC----CccceeeEEECC
Q 006591 288 TAVMTGLQPSSTVSYRYGSEA----VDWSDKIQFRTP 320 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~~----~~~S~~~~F~T~ 320 (639)
...++||+||++|.+||...+ ..||+...|+|+
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTP 105 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEECC
Confidence 357899999999999997522 246777777774
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.27 E-value=0.07 Score=42.90 Aligned_cols=19 Identities=16% Similarity=0.307 Sum_probs=17.1
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+++||+|+|+|.|||..
T Consensus 61 ~~~i~~L~p~t~Y~frV~A 79 (104)
T d1bpva_ 61 EFTVSGLTEDAAYEFRVIA 79 (104)
T ss_dssp EEEECSCCSSCCEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEEEE
Confidence 5678999999999999976
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.41 E-value=0.16 Score=49.44 Aligned_cols=71 Identities=18% Similarity=0.138 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEec
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAI 408 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~ 408 (639)
.++++||+|.. ...+-++.+......-.-.+++||+++.+...-+-=.++=.+ .+.-.--++...
T Consensus 46 pv~VvGDlHG~--------------~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~slEvl~lL~al-Ki~~P~~v~lLR 110 (288)
T d3c5wc1 46 PVTVCGDVHGQ--------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVAL-KVRYRERITILR 110 (288)
T ss_dssp SEEEECBCTTC--------------HHHHHHHHHHHCCTTTSCEEECSCCCCSSSSHHHHHHHHHHH-HHHCTTTEEECC
T ss_pred CeEEEeeCCCC--------------HHHHHHHHHhcCCCccceEEecCcccCCCCcceeHHHHHHHH-HhhCCCeEEEec
Confidence 38999999943 344555555543332345888999996544332211111111 122345699999
Q ss_pred CCCCcC
Q 006591 409 GNHERD 414 (639)
Q Consensus 409 GNHD~~ 414 (639)
||||..
T Consensus 111 GNHE~~ 116 (288)
T d3c5wc1 111 GNHESR 116 (288)
T ss_dssp CTTSSH
T ss_pred cCCccc
Confidence 999963
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=92.35 E-value=0.48 Score=45.32 Aligned_cols=180 Identities=12% Similarity=0.067 Sum_probs=92.7
Q ss_pred CceEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceE
Q 006591 326 DEMKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYM 405 (639)
Q Consensus 326 ~~~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~ 405 (639)
+.+|++++||.=. +||...+.+.|-+..++.++|||+..|-++- .|.---.+.+.++++ ..+- .
T Consensus 3 ~~MkILfiGDIvG-----------~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa-~G~Git~k~~~eL~~---~GvD-v 66 (281)
T d1t71a_ 3 NSIKFIFLGDVYG-----------KAGRNIIKNNLAQLKSKYQADLVIVNAENTT-HGKGLSLKHYEFLKE---AGVN-Y 66 (281)
T ss_dssp CCCEEEEECEEBH-----------HHHHHHHHTTHHHHHHHHTCSEEEEECTBTT-TTSSCCHHHHHHHHH---HTCC-E
T ss_pred ccceEEEEEccCC-----------HHHHHHHHHHhHHHHHHhCCCEEEECCccCC-CCcCCCHHHHHHHHH---hCCc-E
Confidence 4689999999642 2333333333333334578999999999984 443222222222221 2444 3
Q ss_pred EecCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC--CCC--CCHHHHHHHHH
Q 006591 406 TAIGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH--DWW--LNSEQYKWIQK 481 (639)
Q Consensus 406 ~v~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~--~~~--~g~~Q~~WL~~ 481 (639)
.+.|||=++....-. |-..+ ...-.|..---..|...+++.|..++.++.++.+++--- ... .-.....-+++
T Consensus 67 IT~GNH~wd~kei~~-~i~~~--~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~ 143 (281)
T d1t71a_ 67 ITMGNHTWFQKLDLA-VVINK--KDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKE 143 (281)
T ss_dssp EECCTTTTCCGGGHH-HHTTC--TTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHH
T ss_pred EEcCchhhhchhhHH-HHhhc--ccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHH
Confidence 679999875321100 00000 000001100001233334567888998876777776432 111 11222333444
Q ss_pred HHhhccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccc
Q 006591 482 DLASVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 482 ~La~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
.+. +.+.+.+||=+|.=.-+ + ..+ .-.+-+-+|.+|+.=|+|.
T Consensus 144 ~~~---~~~~d~i~VDfHaEATS---------E--K~A-~g~~lDGrvsaVvGTHTHV 186 (281)
T d1t71a_ 144 LIL---KRDCDLHIVDFHAETTS---------E--KNA-FCMAFDGYVTTIFGTHTHV 186 (281)
T ss_dssp HHT---TCCCSEEEEEEECSCHH---------H--HHH-HHHHHTTTSSEEEEESSSS
T ss_pred hhc---ccCCCeEEEEeccchhh---------h--hhh-heeeeCCcEEEEEecCccc
Confidence 444 24567788888853211 1 112 2234466899999999997
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=91.64 E-value=0.22 Score=48.45 Aligned_cols=69 Identities=12% Similarity=0.073 Sum_probs=41.2
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhh-hhhhcCCceEEec
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQI-TPVASRVSYMTAI 408 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l-~~l~~~vP~~~v~ 408 (639)
+.++||+|.. ...+-++.+..-...-.-.+++||.++.+...- +-..-.+ -.+.-.--++...
T Consensus 54 v~VvGDiHG~--------------~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~sl--E~i~lL~aLKi~~P~~v~lLR 117 (294)
T d1jk7a_ 54 LKICGDIHGQ--------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLR 117 (294)
T ss_dssp EEEECBCTTC--------------HHHHHHHHHHHCCTTSSCEEECSCCSSSSSCHH--HHHHHHHHHHHHSTTTEEECC
T ss_pred eEEEEECCCC--------------hHhHHHHHhhcCCCccceEEeeccccCCCccch--HHHHHHHHHHhhCCCeEEEec
Confidence 7999999943 344555555543333345888999996543332 2111111 1122345699999
Q ss_pred CCCCcC
Q 006591 409 GNHERD 414 (639)
Q Consensus 409 GNHD~~ 414 (639)
||||..
T Consensus 118 GNHE~~ 123 (294)
T d1jk7a_ 118 GNHECA 123 (294)
T ss_dssp CTTSSH
T ss_pred CCcccc
Confidence 999974
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=91.59 E-value=1.7 Score=40.63 Aligned_cols=171 Identities=18% Similarity=0.222 Sum_probs=93.6
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||.=. +||. ..++..+..+++ +.|||+..|.++ +.|.---.+.+.++++ ..+- ..+
T Consensus 1 MkiLfiGDIvG-----------~~Gr-~~v~~~Lp~Lk~-~~DfVIaNgENa-a~G~Git~k~~~~L~~---~GVD-vIT 62 (252)
T d2z06a1 1 MRVLFIGDVMA-----------EPGL-RAVGLHLPDIRD-RYDLVIANGENA-ARGKGLDRRSYRLLRE---AGVD-LVS 62 (252)
T ss_dssp CEEEEECCBCH-----------HHHH-HHHHHHHHHHGG-GCSEEEEECTTT-TTTSSCCHHHHHHHHH---HTCC-EEE
T ss_pred CeEEEEeccCC-----------HHHH-HHHHHHhHHHHh-hCCEEEEeeecc-CCCcCCCHHHHHHHHH---hCCC-EEE
Confidence 58999999642 2333 444555555543 589999999998 4443221222222221 2444 367
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCCCCCCCCeEEEEeCCEEEEEEeCCC--CCCCCHHHHHHHHHHHhh
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPTPSKDRPWYSIEQASVHFTVISTEH--DWWLNSEQYKWIQKDLAS 485 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~~~~~~~~Ysfd~G~v~fi~LDT~~--~~~~g~~Q~~WL~~~La~ 485 (639)
.|||=++...--. |-. ..+.-+-.++|...++..|+.|+.++.++.+++-.- .......-.+-+++.|+.
T Consensus 63 ~GNH~wdkkei~~-~i~-------~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~ 134 (252)
T d2z06a1 63 LGNHAWDHKEVYA-LLE-------SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE 134 (252)
T ss_dssp CCTTTTSCTTHHH-HHH-------HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH
T ss_pred cCcccccchhhhh-hhc-------cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh
Confidence 9999876321100 000 001112233455555677999999888887777422 111112223334444553
Q ss_pred ccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCcccc
Q 006591 486 VDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHN 539 (639)
Q Consensus 486 ~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~ 539 (639)
.+.+.+||=+|.=.-+ + +.-.-.+-+-+|.+|+.=|+|.
T Consensus 135 ---~~~~~i~VDfHaEaTS---------E---K~A~g~~ldGrvsavvGTHTHV 173 (252)
T d2z06a1 135 ---EKADYVLVEVHAEATS---------E---KMALAHYLDGRASAVLGTHTHV 173 (252)
T ss_dssp ---CCCSEEEEEEECSCHH---------H---HHHHHHHHBTTBSEEEEESSCS
T ss_pred ---cCccEEEEEcccchhh---------h---heeeeEecCCCEEEEEecCccc
Confidence 3456788888853211 1 1122334566899999999997
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.28 E-value=0.24 Score=48.83 Aligned_cols=70 Identities=17% Similarity=0.160 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcC-CCcEEEEcCCccccCCcHHHHHHHHHhh-hhhhcCCceEE
Q 006591 329 KFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNG-NVDSVFHIGDISYATGFLVEWDFFLHQI-TPVASRVSYMT 406 (639)
Q Consensus 329 ~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~-~pDfVl~~GDl~y~~g~~~~wd~f~~~l-~~l~~~vP~~~ 406 (639)
.+.++||+|.. ...+-++.+..-.. .-.-.+++||+++. |..+ .+-+.-.+ -.+.-.--++.
T Consensus 61 pv~VvGDiHGq--------------~~DL~~if~~~g~p~~~~~ylFLGDYVDR-G~~s-lEvi~lL~~lKi~yP~~v~L 124 (324)
T d1s95a_ 61 KITVCGDTHGQ--------------FYDLLNIFELNGLPSETNPYIFNGDFVDR-GSFS-VEVILTLFGFKLLYPDHFHL 124 (324)
T ss_dssp EEEEECCCTTC--------------HHHHHHHHHHHCCCBTTBCEEEESCCSSS-STTH-HHHHHHHHHHHHHSTTTEEE
T ss_pred CEEEEEECCCC--------------HHHHHHHHHHCCCCCCCCeEEEecccccC-cCcc-eeehHHHHHHHHhCCCcEEe
Confidence 78899999943 33344444432111 12248999999965 4322 22211111 11223456999
Q ss_pred ecCCCCcC
Q 006591 407 AIGNHERD 414 (639)
Q Consensus 407 v~GNHD~~ 414 (639)
..||||..
T Consensus 125 LRGNHE~~ 132 (324)
T d1s95a_ 125 LRGNHETD 132 (324)
T ss_dssp ECCTTSSH
T ss_pred ccCCcccc
Confidence 99999973
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.78 E-value=0.27 Score=50.77 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=39.7
Q ss_pred EEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEecC
Q 006591 330 FLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTAIG 409 (639)
Q Consensus 330 f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v~G 409 (639)
+.++||+|.. ...+-+|.+..-...-.-.+++||+++.+...-+-=.++=.++ +.-.-.++...|
T Consensus 72 v~VvGDIHGq--------------~~DLl~If~~~G~P~~~~yLFLGDYVDRG~~SlEvlllL~aLK-i~yP~~V~LLRG 136 (473)
T d1auia_ 72 VTVCGDIHGQ--------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALK-ILYPKTLFLLRG 136 (473)
T ss_dssp EEEECCCTTC--------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHH-HHSTTTEEECCC
T ss_pred EEEEEeCCCC--------------HHHHHHHHHHcCCCCcceEEecCccccCCcccHHHHHHHHHHH-HhCCCeEEEeCC
Confidence 7899999943 3344455554432223347899999965443322111111111 223456999999
Q ss_pred CCCc
Q 006591 410 NHER 413 (639)
Q Consensus 410 NHD~ 413 (639)
|||.
T Consensus 137 NHE~ 140 (473)
T d1auia_ 137 NHEC 140 (473)
T ss_dssp TTSS
T ss_pred CCcc
Confidence 9995
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.60 E-value=0.56 Score=37.42 Aligned_cols=79 Identities=14% Similarity=0.078 Sum_probs=43.7
Q ss_pred CCCCceeE-EeeccCCCCceEEEEEeCCCC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 213 PKKPLYGH-LSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 213 ~~~P~~~~-l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
|..|..+. ++- ...++|+++|.-+... ...+.|............... .|. . .......
T Consensus 5 P~~P~~v~~i~~--~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~---~~~-----~------~~~~~~~ 68 (107)
T d1cd9b1 5 PASPSNLSCLMH--LTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIP---DCV-----A------KKRQNNC 68 (107)
T ss_dssp CCCCEEEEEEEE--TTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEE---EEE-----C------CTTCCEE
T ss_pred cCCCcCCEEEEe--cCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeee---eec-----c------ccCcccc
Confidence 55676665 332 2457999999865332 235566543322111110000 010 0 0113456
Q ss_pred EEEecCCCCCcEEEEEEccC
Q 006591 288 TAVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~~ 307 (639)
.+.+++|+|++.|.+||...
T Consensus 69 ~~~~~~L~~~t~Y~frV~A~ 88 (107)
T d1cd9b1 69 SIPRKNLLLYQYMAIWVQAE 88 (107)
T ss_dssp EEEGGGCCTTSCEEEEEEEE
T ss_pred EEEcCCCCcCceEEEEEEEE
Confidence 78899999999999999754
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.59 E-value=0.3 Score=38.65 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=17.6
Q ss_pred EEEEecCCCCCcEEEEEEcc
Q 006591 287 HTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 287 h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
...+|.+|+|++.|.+||..
T Consensus 61 ~~~~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 61 HSMALPALEPSTRYWARVRV 80 (100)
T ss_dssp SEEECCCCCSSCCCEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEE
Confidence 36789999999999999965
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.64 E-value=0.033 Score=45.17 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=25.3
Q ss_pred EEEEEecCCCCCcEEEEEEcc----CCCccceeeEEECC
Q 006591 286 IHTAVMTGLQPSSTVSYRYGS----EAVDWSDKIQFRTP 320 (639)
Q Consensus 286 ~h~a~l~gL~P~t~Y~Yrvg~----~~~~~S~~~~F~T~ 320 (639)
.+...+.+|+|++ |.+||.. +...||+...|.|+
T Consensus 62 ~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 62 ERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp TTCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECCC
T ss_pred eEEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEcc
Confidence 3457889999985 9999864 12358888889885
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=87.32 E-value=0.54 Score=37.51 Aligned_cols=70 Identities=9% Similarity=0.042 Sum_probs=40.4
Q ss_pred CCceeEEeeccCCCCceEEEEEeCCC----C---CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEE
Q 006591 215 KPLYGHLSSVDSTGTSMRLTWVSGDK----E---PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIH 287 (639)
Q Consensus 215 ~P~~~~l~~~~~~~~sm~v~W~T~~~----~---~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h 287 (639)
.|..+...... .++++|+|.-... . .-.|+|...+..... ...... .+...
T Consensus 7 ~P~~v~~~~~~--~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~-----~~~~~~---------------~~~~~ 64 (105)
T d1cfba2 7 NPDNVVGQGTE--PNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAW-----ENNNIF---------------DWRQN 64 (105)
T ss_dssp CCSCCEEECSS--TTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCC-----EEEEEC---------------CTTCC
T ss_pred CCcCeEEEEcc--CCeEEEEEeCCChhhcCceEEEEEEEeeeeccccce-----eEEEec---------------CCCcc
Confidence 46666665543 5799999974211 1 126777654332110 000000 01224
Q ss_pred EEEecCCCCCcEEEEEEcc
Q 006591 288 TAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 288 ~a~l~gL~P~t~Y~Yrvg~ 306 (639)
..+|.+|+|++.|.++|..
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A 83 (105)
T d1cfba2 65 NIVIADQPTFVKYLIKVVA 83 (105)
T ss_dssp EEEECSCCSSCEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEE
Confidence 6789999999999999975
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=86.94 E-value=6.6 Score=36.55 Aligned_cols=174 Identities=17% Similarity=0.148 Sum_probs=93.7
Q ss_pred eEEEEEecCCCCCCCCCCccccCcChHHHHHHHHHHhhcCCCcEEEEcCCccccCCcHHHHHHHHHhhhhhhcCCceEEe
Q 006591 328 MKFLAYGDMGKAPRDASTEHYIQPGSLSVVKAMSDEVNNGNVDSVFHIGDISYATGFLVEWDFFLHQITPVASRVSYMTA 407 (639)
Q Consensus 328 ~~f~v~gD~~~~~~~~~~~~~~~pg~~~~~~~l~~~i~~~~pDfVl~~GDl~y~~g~~~~wd~f~~~l~~l~~~vP~~~v 407 (639)
+|++++||.=. +|| ...++..+..+++ +.|||+..|.++ +.|.---.+.+.++++ ..+-+ .+
T Consensus 1 MkILfiGDIvG-----------~~G-r~~v~~~Lp~lk~-~~DfVIaNgENa-a~G~Git~~~~~~l~~---~GvDv-iT 62 (255)
T d1t70a_ 1 MRVLFIGDVFG-----------QPG-RRVLQNHLPTIRP-QFDFVIVNMENS-AGGFGMHRDAARGALE---AGAGC-LT 62 (255)
T ss_dssp CEEEEECCBBH-----------HHH-HHHHHHHHHHHGG-GCSEEEEECTBT-TTTSSCCHHHHHHHHH---HTCSE-EE
T ss_pred CeEEEEecCCC-----------HHH-HHHHHHHhHHHHh-hCCEEEECCccC-CCCcCCCHHHHHHHHH---cCCcE-EE
Confidence 58999999642 233 3455555556654 589999999998 4454222222222222 24443 67
Q ss_pred cCCCCcCCCCCCCccCCCCCCCccccccccccCCCC-CCCCCCeEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHh
Q 006591 408 IGNHERDYVNSGSVYSTPDSGGECGIPYETYFPMPT-PSKDRPWYSIEQASVHFTVISTE--HDWWLNSEQYKWIQKDLA 484 (639)
Q Consensus 408 ~GNHD~~~~~~~~~y~~~dsgge~~~~y~~~f~~P~-~~~~~~~Ysfd~G~v~fi~LDT~--~~~~~g~~Q~~WL~~~La 484 (639)
.|||=++...--. |-.. + .....+-..+|. ..++..|+.|+..+.++.+++-- .....-..-.+-+++.|+
T Consensus 63 ~GNH~wdkkei~~-~i~~----~-~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~ 136 (255)
T d1t70a_ 63 LGNHAWHHKDIYP-MLSE----D-TYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLE 136 (255)
T ss_dssp CCTTTTSSTTHHH-HHHT----T-CSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTT
T ss_pred cCchhhcchhHHH-HHhh----c-chhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHh
Confidence 9999875321000 0000 0 000111112332 23456788888888777777642 221222222344666666
Q ss_pred hccCCCCCeEEEEeccCCccCCCCCCchhHHHHHHHHHHHHhCCCeEEEeCccccc
Q 006591 485 SVDRSKTPWLIFAGHRPMYSSLDGFLSVDKFFVKSVEPLLLKNKVDLVLFGHVHNY 540 (639)
Q Consensus 485 ~~~r~~~pwvIV~~H~P~y~~~~~~~~~~~~~r~~l~~Ll~~y~VdlvlsGH~H~Y 540 (639)
+ .+.+.+||=+|.=.-+ + ... .-.+-+-+|.+|+.=|+|.-
T Consensus 137 ~---~~~~~i~VDfHaEaTS---------E--K~A-~g~~ldGrvsav~GTHTHV~ 177 (255)
T d1t70a_ 137 R---DDLGTVFVDFHAEATS---------E--KEA-MGWHLAGRVAAVIGTHTHVP 177 (255)
T ss_dssp C---SSCCEEEEEEECSCHH---------H--HHH-HHHHHTTSSSEEEEESSCSC
T ss_pred h---cCCCeEEEEccchhHH---------H--HHH-HHhhhcCcEEEEEecCcccc
Confidence 4 3456688888853211 1 112 23344668999999999973
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.83 E-value=0.64 Score=36.30 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=41.1
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCC----CcEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCCceEEE
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKE----PQQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNPGYIHT 288 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~----~~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~g~~h~ 288 (639)
|..|.-+++... +.++|+++|.-.... .-.|+|...+.... .....+ .. +. ..
T Consensus 4 P~~P~n~~~~~~--~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~------~~~~~~------~~-------~~--~~ 60 (95)
T d1bqua1 4 PEKPKNLSCIVN--EGKKMRCEWDGGRETHLETNFTLKSEWATHKFA------DCKAKR------DT-------PT--SC 60 (95)
T ss_dssp CCCCEEEEEEEE--TTSCCEEEEECCSCCSSCCEEEEEEEETTEECC------CEECCS------SC-------TT--EE
T ss_pred cCCCeeeEEEEc--cCCEEEEEEeCcccCCCceEEEEEEEEccccee------Eeeccc------cc-------ce--ee
Confidence 566766666554 357899999965432 23666654332111 000000 00 01 22
Q ss_pred EEecCCCCCcEEEEEEccC
Q 006591 289 AVMTGLQPSSTVSYRYGSE 307 (639)
Q Consensus 289 a~l~gL~P~t~Y~Yrvg~~ 307 (639)
.++.+|.|++.|++||...
T Consensus 61 ~~~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 61 TVDYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp ECSSCCCTTSCEEEEEEEE
T ss_pred eeeeecCCCcEEEEEEEEE
Confidence 4678999999999999764
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.68 E-value=0.48 Score=37.33 Aligned_cols=67 Identities=12% Similarity=0.157 Sum_probs=36.4
Q ss_pred CCCCceeEEeeccCCCCceEEEEEeCCCCC---------cEEEEecCCCcccceeeeeeccccccCCCCCCCCCCCccCC
Q 006591 213 PKKPLYGHLSSVDSTGTSMRLTWVSGDKEP---------QQVEYGDDGKTQTSEVSTFTQENMCSSALPSPAKDFGWHNP 283 (639)
Q Consensus 213 ~~~P~~~~l~~~~~~~~sm~v~W~T~~~~~---------~~V~yg~~g~~~~~~~~t~~~~~~~~~~~~~pa~~~g~~~~ 283 (639)
|..|.-+.+....+ .+.+.|.|....... -.|+|...+........
T Consensus 2 PdPP~nl~v~~~~~-~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~------------------------ 56 (94)
T d3d85d3 2 PDPPKNLQLKPLKN-SRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRV------------------------ 56 (94)
T ss_dssp CCCCEEEEEEEC-----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEE------------------------
T ss_pred CCCCcccEEEEecC-CCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEec------------------------
Confidence 56787777776543 367999999765321 26777644432211000
Q ss_pred ceEEEEEecCCCCCcEEEEEEcc
Q 006591 284 GYIHTAVMTGLQPSSTVSYRYGS 306 (639)
Q Consensus 284 g~~h~a~l~gL~P~t~Y~Yrvg~ 306 (639)
....++..|.|++.|.+||..
T Consensus 57 --~~~~t~~~L~p~~~Y~v~VRa 77 (94)
T d3d85d3 57 --FTDKTSATVICRKNASISVRA 77 (94)
T ss_dssp --EESSSEEEECCCSSCEEEEEE
T ss_pred --cccceEEEecCCCCEEEEEEE
Confidence 001112358899999999976
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.15 E-value=0.35 Score=39.90 Aligned_cols=36 Identities=22% Similarity=0.099 Sum_probs=26.3
Q ss_pred eEEEEEecCCCCCcEEEEEEccCC---------CccceeeEEECC
Q 006591 285 YIHTAVMTGLQPSSTVSYRYGSEA---------VDWSDKIQFRTP 320 (639)
Q Consensus 285 ~~h~a~l~gL~P~t~Y~Yrvg~~~---------~~~S~~~~F~T~ 320 (639)
.....+|+||+|+|+|.++|..-+ ...|+...|+|.
T Consensus 80 ~~~~~~l~~L~p~T~Y~~~V~A~n~~G~~~~~~g~~S~~v~~~T~ 124 (125)
T d2dtge3 80 NHPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTD 124 (125)
T ss_dssp SCCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCC
T ss_pred ccCEEEECCCccCCEEEEEEEEEeCCCccCCCCCCCcccEEEEcC
Confidence 345678999999999999997421 135677777774
|