Citrus Sinensis ID: 006605

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64
MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVGQSK
cHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccEEEEEEEccHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccEEEccccccccccccccEEEEEEcHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccEEEEcccccccccccEEEEccccEEEEEEEccccccccEEEEEEccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHHHHHcccEEEEEEEEccccccccccccccccEEEEcccccHHHHHHHHHHcccccccccccccccEEEEcccccccccccccEEEcccccccccccccccccccccccccccccEEEEEcccccccccccccccEEEEEccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccc
cHEEEEEEEEEEEEHHHHccccEEEEEEEccccEEEEccccccccEEEEEcccccccccccHHcHHHHHHHHHHHHHHHccccccccEEEEEcccEcEEEEEccHHHHHHHHHcccEEEEEcccEEEEEccccHHHccccccccccccccccccccEEEEEEccccccccccccccccccccccccccEEEEccccccccHccHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccEEEEcccccEcccccccEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEccccccccccHHcHcHHHHHHHHHHHcccEEEEEccccccccccEcccccEEEEEEccccccccccEEEEccccEEEEEEccccccccccEEEEEccccccccccccccHHHHcccccccHHHcccEEEEEEccccccccccHHHHHHHHHHHcccEEEEEEEcccccccEcccccccccEEEEccHHHHHHHHHHHHccccccccEEEEEcccEEEEEcccEEEccccccEEEEEccccccccccccccHHHccccccccccEEEEEEccccccccccccccEEEEcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccc
MIAAEFLCIFIVLFTIFILGRAEVYIVTvegepiisyrggdngfeatavesdekidtTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEIlqrapgvksverdwkvrrltthtpeflglptgvwptgggfdrageDIVIGFvdsgiyphhpsfgshhtdpygpvpkyrgkcevdpdtkrsfcngkIIGAQHFAEAAIAArafnpavdfaspldgdghgshTAAIaagnngipvrmhghefgrasgmapRARIAVYKALYRLFGGFVADVVAAIDQAVHDGvdilslsvgpnsppattkttflnpfDVTLLAAVKAGVFVAqaagnggpfpktlvsyspwITTVAAAIDdrryknhlnlgngkilagiglspathgnrtFTLVAANDVLLDSSvmkysasdcqrpevlnkNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVenvspgtkfdpvpvgipgilitdvtksmdlvdyyntsttrdwtgrvksfkgtgtigdglmpilhksapqvalfsargpnikdfsfqdadllkpdilapgsliwaawspngtdeanfVGKRICLDiwnqygcttysrdscsceaeapllepscykisiddhnnevgqsk
MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEpiisyrggdNGFEAtavesdekidtTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILqrapgvksverdwkvrrltthtpeflglptgvwPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSpgtkfdpvpvgiPGILitdvtksmDLVDYYNtsttrdwtgrvkSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVGQSK
MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGaqhfaeaaiaarafnpaVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFvadvvaaidqavhdGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVGQSK
**AAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAV*****IDTTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDG****SHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGP****ATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISI***********
*IAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDN************************RHLEK*****************LYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPT*************EDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGT***NFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDH********
MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVGQSK
MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARA*******ASPL**DGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDH*N******
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSELVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVGQSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query639 2.2.26 [Sep-21-2011]
Q39547 731 Cucumisin OS=Cucumis melo N/A no 0.708 0.619 0.337 4e-55
O65351 757 Subtilisin-like protease no no 0.701 0.591 0.324 6e-55
O64495 775 Subtilisin-like protease no no 0.749 0.618 0.312 2e-52
Q9LLL8 749 Xylem serine proteinase 1 no no 0.733 0.626 0.306 3e-50
O31788442 Serine protease AprX OS=B yes no 0.367 0.531 0.231 7e-07
P29141 806 Minor extracellular prote no no 0.411 0.326 0.255 1e-06
P27693380 Alkaline protease OS=Baci N/A no 0.289 0.486 0.244 6e-05
Q99405380 M-protease OS=Bacillus cl no no 0.348 0.586 0.235 6e-05
P41362380 Alkaline protease OS=Baci no no 0.289 0.486 0.244 7e-05
Q45670401 Thermophilic serine prote N/A no 0.192 0.306 0.323 9e-05
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 Back     alignment and function desciption
 Score =  216 bits (551), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 172/510 (33%), Positives = 251/510 (49%), Gaps = 57/510 (11%)

Query: 68  HLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVR 127
           H     + ++G  F  ++   L++YK   NGFAV +T ++AE +    GV SV  +    
Sbjct: 51  HHRAMLEQVVGSTFAPESV--LHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNE 108

Query: 128 RLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKY 187
             TT + +FLG P  V P     +    +IV+G +D+GI+P  PSF      P  P PK+
Sbjct: 109 LHTTRSWDFLGFPLTV-PRRSQVE---SNIVVGVLDTGIWPESPSFDDEGFSP--PPPKW 162

Query: 188 RGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAG 247
           +G CE   + +   CN KIIGA+ +       R  +P  D   P D +GHG+HTA+ AAG
Sbjct: 163 KGTCETSNNFR---CNRKIIGARSYH----IGRPISPG-DVNGPRDTNGHGTHTASTAAG 214

Query: 248 NNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLS 307
                  ++G   G A G  P ARIA YK  +   G    D++AA D A+ DGVDI+SLS
Sbjct: 215 GLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTDILAAYDDAIADGVDIISLS 273

Query: 308 VGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAI 367
           VG  +P    +  F++   +    AV+ G+  + +AGNGGP   T  S SPW+ +VAA+ 
Sbjct: 274 VGGANP----RHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAAST 329

Query: 368 DDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVL 427
            DR++   + +GNG+   G+ ++  T  N+ + LV+  D+  ++   K ++  C    V 
Sbjct: 330 MDRKFVTQVQIGNGQSFQGVSIN--TFDNQYYPLVSGRDI-PNTGFDKSTSRFCTDKSV- 385

Query: 428 NKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGI 487
           N NL++G I++C  SF             E  KSL  A  VL   N        P+P   
Sbjct: 386 NPNLLKGKIVVCEASFG----------PHEFFKSLDGAAGVLMTSNTRDYADSYPLP--- 432

Query: 488 PGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSAR 547
                + V    DL+     +T R     + S +  G        IL+ SAP V  FS+R
Sbjct: 433 -----SSVLDPNDLL-----ATLR----YIYSIRSPGATIFKSTTILNASAPVVVSFSSR 478

Query: 548 GPNIKDFSFQDADLLKPDILAPGSLIWAAW 577
           GPN         D++KPDI  PG  I AAW
Sbjct: 479 GPN-----RATKDVIKPDISGPGVEILAAW 503

Cucumis melo (taxid: 3656)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 2EC: 5
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 Back     alignment and function description
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 Back     alignment and function description
>sp|O31788|APRX_BACSU Serine protease AprX OS=Bacillus subtilis (strain 168) GN=aprX PE=1 SV=1 Back     alignment and function description
>sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 Back     alignment and function description
>sp|P27693|ELYA_BACAO Alkaline protease OS=Bacillus alcalophilus PE=1 SV=1 Back     alignment and function description
>sp|Q99405|PRTM_BACSK M-protease OS=Bacillus clausii (strain KSM-K16) GN=aprE PE=1 SV=2 Back     alignment and function description
>sp|P41362|ELYA_BACCS Alkaline protease OS=Bacillus clausii PE=1 SV=1 Back     alignment and function description
>sp|Q45670|THES_BACSJ Thermophilic serine proteinase OS=Bacillus sp. (strain AK1) PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query639
225470678 817 PREDICTED: subtilisin-like protease [Vit 0.929 0.727 0.867 0.0
224087319 817 predicted protein [Populus trichocarpa] 0.929 0.727 0.870 0.0
224142711 817 predicted protein [Populus trichocarpa] 0.929 0.727 0.868 0.0
356562099 817 PREDICTED: subtilisin-like protease-like 0.929 0.727 0.831 0.0
356549936 817 PREDICTED: subtilisin-like protease-like 0.929 0.727 0.855 0.0
357479547 823 Subtilisin-like serine protease [Medicag 0.898 0.697 0.848 0.0
357449555 830 Subtilisin-like serine protease [Medicag 0.928 0.714 0.814 0.0
255573564 822 peptidase, putative [Ricinus communis] g 0.899 0.699 0.854 0.0
449507422 816 PREDICTED: subtilisin-like protease-like 0.928 0.726 0.831 0.0
356558312 827 PREDICTED: subtilisin-like protease-like 0.923 0.713 0.833 0.0
>gi|225470678|ref|XP_002269786.1| PREDICTED: subtilisin-like protease [Vitis vinifera] gi|296090288|emb|CBI40107.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1086 bits (2808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/594 (86%), Positives = 559/594 (94%)

Query: 1   MIAAEFLCIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSE 60
           M A E  C  +VLF++ I G AE+YIVTV GEP+ISY+GG  GFEATAVESDE ID TSE
Sbjct: 1   MRAMELGCAVVVLFSLLIAGNAEIYIVTVIGEPVISYKGGVPGFEATAVESDETIDVTSE 60

Query: 61  LVTSYARHLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSV 120
           LVTSY+RHLE KHDMLL LLFE  TYKKLYSY+HLINGFAVHI+P+QAE+L++APGVKSV
Sbjct: 61  LVTSYSRHLEMKHDMLLSLLFEHGTYKKLYSYRHLINGFAVHISPEQAEVLRQAPGVKSV 120

Query: 121 ERDWKVRRLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDP 180
           ERDWKVRRLTTHTP+FLGLPTGVWPTGGGFDRAGEDIVIGFVDSGI+PHHPSF +H+ +P
Sbjct: 121 ERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIFPHHPSFATHNVEP 180

Query: 181 YGPVPKYRGKCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSH 240
           YGP+PKYRGKCEVDPDTKR+FCNGKI+GAQHFAEAAIAA +FNP+VDFASPLDGDGHGSH
Sbjct: 181 YGPIPKYRGKCEVDPDTKRNFCNGKIVGAQHFAEAAIAAGSFNPSVDFASPLDGDGHGSH 240

Query: 241 TAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDG 300
           TAAIAAGNNGIPVRMHG+EFG+ASGMAPRAR+AVYKALYRLFGGFVADVVAAIDQAVHDG
Sbjct: 241 TAAIAAGNNGIPVRMHGYEFGKASGMAPRARVAVYKALYRLFGGFVADVVAAIDQAVHDG 300

Query: 301 VDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWI 360
           VDIL+LSVGPNSPPATTKTTFLNPFD  LL+AVKAGVFVAQAAGNGGPFPK+L+SYSPWI
Sbjct: 301 VDILNLSVGPNSPPATTKTTFLNPFDAALLSAVKAGVFVAQAAGNGGPFPKSLLSYSPWI 360

Query: 361 TTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASD 420
            +VAAAIDDRRYKNHL LGNGKIL GIGLSP+TH NRTFTLVAANDVLLDSSV+KYS SD
Sbjct: 361 ASVAAAIDDRRYKNHLTLGNGKILPGIGLSPSTHFNRTFTLVAANDVLLDSSVVKYSPSD 420

Query: 421 CQRPEVLNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKF 480
           CQRPEVLNKNLVEGNILLCGYSFNFV GTASIKKVSETAKSLGA GFVLAVENVSPGTKF
Sbjct: 421 CQRPEVLNKNLVEGNILLCGYSFNFVVGTASIKKVSETAKSLGAIGFVLAVENVSPGTKF 480

Query: 481 DPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQ 540
           DPVPV IPGILIT+V+KSMDL++YYNTST+RDWTGRVKSFK TG+IGDGLMPILHKSAPQ
Sbjct: 481 DPVPVSIPGILITEVSKSMDLIEYYNTSTSRDWTGRVKSFKATGSIGDGLMPILHKSAPQ 540

Query: 541 VALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICL 594
           VALFSARGPNI+DF+FQDADLLKPDILAPGSLIWAAWSPNGTDEAN+VG+   +
Sbjct: 541 VALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGTDEANYVGEGFAM 594

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224087319|ref|XP_002308119.1| predicted protein [Populus trichocarpa] gi|222854095|gb|EEE91642.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224142711|ref|XP_002324698.1| predicted protein [Populus trichocarpa] gi|222866132|gb|EEF03263.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356562099|ref|XP_003549311.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information
>gi|356549936|ref|XP_003543346.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information
>gi|357479547|ref|XP_003610059.1| Subtilisin-like serine protease [Medicago truncatula] gi|355511114|gb|AES92256.1| Subtilisin-like serine protease [Medicago truncatula] Back     alignment and taxonomy information
>gi|357449555|ref|XP_003595054.1| Subtilisin-like serine protease [Medicago truncatula] gi|355484102|gb|AES65305.1| Subtilisin-like serine protease [Medicago truncatula] Back     alignment and taxonomy information
>gi|255573564|ref|XP_002527706.1| peptidase, putative [Ricinus communis] gi|223532896|gb|EEF34665.1| peptidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449507422|ref|XP_004163028.1| PREDICTED: subtilisin-like protease-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356558312|ref|XP_003547451.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query639
TAIR|locus:2126485 816 AT4G30020 "AT4G30020" [Arabido 0.918 0.719 0.794 6.2e-259
TAIR|locus:2059052 815 SLP3 "AT2G19170" [Arabidopsis 0.918 0.720 0.790 9.2e-258
UNIPROTKB|Q5Z852 820 P0468G03.18 "Putative meiotic 0.990 0.771 0.665 8.8e-237
UNIPROTKB|Q94EF5 849 P0665A11.6 "Uncharacterized pr 0.826 0.621 0.467 3.1e-122
TAIR|locus:2163446 840 AT5G44530 "AT5G44530" [Arabido 0.879 0.669 0.431 2.9e-119
TAIR|locus:2128595 856 AT4G20430 "AT4G20430" [Arabido 0.820 0.612 0.437 1e-116
TAIR|locus:2204619 832 AT1G30600 "AT1G30600" [Arabido 0.877 0.674 0.423 1.9e-115
TAIR|locus:2027139 832 ALE1 "AT1G62340" [Arabidopsis 0.871 0.669 0.417 1.4e-103
UNIPROTKB|Q0JBB7 815 Os04g0543700 "Os04g0543700 pro 0.862 0.676 0.376 1.7e-100
TAIR|locus:2091010 775 AT3G14240 "AT3G14240" [Arabido 0.697 0.575 0.327 9e-61
TAIR|locus:2126485 AT4G30020 "AT4G30020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2492 (882.3 bits), Expect = 6.2e-259, P = 6.2e-259
 Identities = 467/588 (79%), Positives = 511/588 (86%)

Query:     8 CIFIVLFTIFILGRAEVYIVTVEGEPIISYRGGDNGFEATAVESDEKIDTTSELVTSYAR 67
             C  +V FT F+   AE+YIVT+EGEPIISY+GGDNGFEATAVESDEKIDTTSELVTSYAR
Sbjct:     5 CKVLVFFTCFLTVTAEIYIVTMEGEPIISYKGGDNGFEATAVESDEKIDTTSELVTSYAR 64

Query:    68 HLEKKHDMLLGLLFERDTYKKLYSYKHLINGFAVHITPDQAEILQRAPGVKSVERDWKVR 127
             HLE+KHDMLLG+LF   +YKKLYSYKHLINGFA H++PDQAE+L+RAPGVKSV+RDWKVR
Sbjct:    65 HLERKHDMLLGMLFVEGSYKKLYSYKHLINGFAAHVSPDQAEMLRRAPGVKSVDRDWKVR 124

Query:   128 RLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTD-PYGPVPK 186
             +LTTHTP+FLGLPT VWPTGGG+DRAGEDIVIGF+DSGI+PHHPSF SHHT  PYGP P 
Sbjct:   125 KLTTHTPQFLGLPTDVWPTGGGYDRAGEDIVIGFIDSGIFPHHPSFASHHTTVPYGPHPS 184

Query:   187 YRGKCEVDPDTKRSFCNGKIIGXXXXXXXXXXXXXXXXXVDFASPLDGDGHGSHTAAIAA 246
             Y+GKCE DP TK SFCNGKIIG                 +DFASP+DGDGHGSHTAAIAA
Sbjct:   185 YKGKCEEDPHTKISFCNGKIIGAQHFAEAAKAAGAFNPDIDFASPMDGDGHGSHTAAIAA 244

Query:   247 GNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFXXXXXXXXXXXXXXGVDILSL 306
             GNNGIPVRMHG+EFG+ASGMAPRARIAVYKALYRLFGGF              GVDILSL
Sbjct:   245 GNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSL 304

Query:   307 SVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA 366
             SVGPNSPPATTKTTFLNPFD TLL AVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA
Sbjct:   305 SVGPNSPPATTKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA 364

Query:   367 IDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEV 426
             IDDRRYKNHL LGNGK+LAGIGLSP+T  +R++ +V+ANDVLL SS MKY+ SDCQ+PEV
Sbjct:   365 IDDRRYKNHLTLGNGKMLAGIGLSPSTRPHRSYKMVSANDVLLGSSGMKYNPSDCQKPEV 424

Query:   427 LNKNLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVG 486
             LNK LVEGNILLCGYSFNFV G+ASIKKV+ETAK LGAAGFVL VENVSPGTKFDPVP  
Sbjct:   425 LNKKLVEGNILLCGYSFNFVAGSASIKKVAETAKHLGAAGFVLVVENVSPGTKFDPVPSC 484

Query:   487 IPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSA 546
             IPGILITDV+KSMDL+DYYN +T+RDW GRVK FK  G+IGDGL PILHKSAP+VALFSA
Sbjct:   485 IPGILITDVSKSMDLIDYYNVTTSRDWMGRVKDFKAEGSIGDGLEPILHKSAPEVALFSA 544

Query:   547 RGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICL 594
             RGPN KDFSFQDADLLKPDILAPGSLIW+AWS NGTDEAN++G+   L
Sbjct:   545 RGPNTKDFSFQDADLLKPDILAPGSLIWSAWSANGTDEANYIGEGFAL 592
GO:0004252 "serine-type endopeptidase activity" evidence=IEA;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA;IBA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IBA
GO:0016020 "membrane" evidence=IEA
GO:0042802 "identical protein binding" evidence=IEA
GO:0043086 "negative regulation of catalytic activity" evidence=IEA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0007020 "microtubule nucleation" evidence=RCA
GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019761 "glucosinolate biosynthetic process" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2059052 SLP3 "AT2G19170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5Z852 P0468G03.18 "Putative meiotic serine proteinase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q94EF5 P0665A11.6 "Uncharacterized protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2163446 AT5G44530 "AT5G44530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128595 AT4G20430 "AT4G20430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204619 AT1G30600 "AT1G30600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027139 ALE1 "AT1G62340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q0JBB7 Os04g0543700 "Os04g0543700 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2091010 AT3G14240 "AT3G14240" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.21LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00009267001
SubName- Full=Chromosome undetermined scaffold_226, whole genome shotgun sequence; (814 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query639
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 1e-103
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 5e-27
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 6e-24
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 2e-17
cd02120126 cd02120, PA_subtilisin_like, PA_subtilisin_like: P 8e-16
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 4e-15
cd07489312 cd07489, Peptidases_S8_5, Peptidase S8 family doma 2e-14
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 1e-13
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 2e-13
pfam0592276 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 5e-13
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 6e-13
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 1e-12
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 5e-12
cd07482294 cd07482, Peptidases_S8_Lantibiotic_specific_protea 3e-07
cd04077255 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep 3e-07
TIGR03921350 TIGR03921, T7SS_mycosin, type VII secretion-associ 2e-06
cd07498242 cd07498, Peptidases_S8_15, Peptidase S8 family dom 2e-06
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 5e-06
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 5e-06
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 7e-06
cd07478455 cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam 5e-05
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 5e-05
COG1404508 COG1404, AprE, Subtilisin-like serine proteases [P 6e-05
cd07496285 cd07496, Peptidases_S8_13, Peptidase S8 family dom 1e-04
pfam0222596 pfam02225, PA, PA domain 2e-04
cd07497311 cd07497, Peptidases_S8_14, Peptidase S8 family dom 7e-04
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 8e-04
cd07485273 cd07485, Peptidases_S8_Fervidolysin_like, Peptidas 8e-04
cd07494298 cd07494, Peptidases_S8_10, Peptidase S8 family dom 0.001
cd04056361 cd04056, Peptidases_S53, Peptidase domain in the S 0.004
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
 Score =  314 bits (807), Expect = e-103
 Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 7/236 (2%)

Query: 130 TTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRG 189
           TT +P+FLGLP     +  G   AGE I+IG +D+GI+P HPSF      PY     + G
Sbjct: 5   TTRSPDFLGLPGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPH--TWPG 62

Query: 190 KCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNN 249
            C    D     CN K+IGA++F++   A   FN   ++ SP D DGHG+HTA+ AAGN 
Sbjct: 63  DCVTGEDFNPFSCNNKLIGARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAGNV 122

Query: 250 GIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVG 309
            +   + G  FG ASG+APRARIAVYK  +   G F +D++AAIDQA+ DGVD++S S+G
Sbjct: 123 VVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAIADGVDVISYSIG 182

Query: 310 PNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAA 365
             SP       + +P  +  L AV+AG+FVA +AGN GP   T+ + +PW+TTVAA
Sbjct: 183 GGSPD-----PYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAA 233

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|239035 cd02120, PA_subtilisin_like, PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|203351 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin Back     alignment and domain information
>gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>gnl|CDD|216938 pfam02225, PA, PA domain Back     alignment and domain information
>gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information
>gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>gnl|CDD|173819 cd07494, Peptidases_S8_10, Peptidase S8 family domain, uncharacterized subfamily 10 Back     alignment and domain information
>gnl|CDD|173788 cd04056, Peptidases_S53, Peptidase domain in the S53 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 639
cd07478455 Peptidases_S8_CspA-like Peptidase S8 family domain 100.0
cd04852307 Peptidases_S8_3 Peptidase S8 family domain, unchar 100.0
cd07497311 Peptidases_S8_14 Peptidase S8 family domain, uncha 100.0
cd07479255 Peptidases_S8_SKI-1_like Peptidase S8 family domai 100.0
PTZ00262639 subtilisin-like protease; Provisional 100.0
cd07483291 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa 100.0
cd07476267 Peptidases_S8_thiazoline_oxidase_subtilisin-like_p 100.0
cd05562275 Peptidases_S53_like Peptidase domain in the S53 fa 100.0
cd07475346 Peptidases_S8_C5a_Peptidase Peptidase S8 family do 100.0
cd07493261 Peptidases_S8_9 Peptidase S8 family domain, unchar 100.0
cd07481264 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 100.0
cd04857412 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid 100.0
cd07489312 Peptidases_S8_5 Peptidase S8 family domain, unchar 100.0
cd04847291 Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil 100.0
cd07487264 Peptidases_S8_1 Peptidase S8 family domain, unchar 100.0
cd07474295 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam 100.0
cd05561239 Peptidases_S8_4 Peptidase S8 family domain, unchar 100.0
cd07485273 Peptidases_S8_Fervidolysin_like Peptidase S8 famil 100.0
KOG1153501 consensus Subtilisin-related protease/Vacuolar pro 100.0
cd07490254 Peptidases_S8_6 Peptidase S8 family domain, unchar 100.0
cd07496285 Peptidases_S8_13 Peptidase S8 family domain, uncha 100.0
cd04842293 Peptidases_S8_Kp43_protease Peptidase S8 family do 100.0
cd07484260 Peptidases_S8_Thermitase_like Peptidase S8 family 100.0
cd04077255 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 100.0
cd07498242 Peptidases_S8_15 Peptidase S8 family domain, uncha 100.0
cd07494298 Peptidases_S8_10 Peptidase S8 family domain, uncha 100.0
cd07473259 Peptidases_S8_Subtilisin_like Peptidase S8 family 100.0
cd07491247 Peptidases_S8_7 Peptidase S8 family domain, unchar 100.0
cd07477229 Peptidases_S8_Subtilisin_subset Peptidase S8 famil 100.0
cd07480297 Peptidases_S8_12 Peptidase S8 family domain, uncha 100.0
cd04843277 Peptidases_S8_11 Peptidase S8 family domain, uncha 100.0
cd07482294 Peptidases_S8_Lantibiotic_specific_protease Peptid 100.0
cd07492222 Peptidases_S8_8 Peptidase S8 family domain, unchar 100.0
cd04059297 Peptidases_S8_Protein_convertases_Kexins_Furin-lik 100.0
cd04848267 Peptidases_S8_Autotransporter_serine_protease_like 100.0
PF00082282 Peptidase_S8: Subtilase family This is family S8 i 100.0
KOG4266 1033 consensus Subtilisin kexin isozyme-1/site 1 protea 99.97
cd07488247 Peptidases_S8_2 Peptidase S8 family domain, unchar 99.97
cd00306241 Peptidases_S8_S53 Peptidase domain in the S8 and S 99.96
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 99.95
COG1404508 AprE Subtilisin-like serine proteases [Posttransla 99.86
KOG3526629 consensus Subtilisin-like proprotein convertase [P 99.79
cd04056361 Peptidases_S53 Peptidase domain in the S53 family. 99.59
cd02133143 PA_C5a_like PA_C5a_like: Protease-associated domai 99.29
cd02120126 PA_subtilisin_like PA_subtilisin_like: Protease-as 99.14
cd02129120 PA_hSPPL_like PA_hSPPL_like: Protease-associated d 98.96
cd02127118 PA_hPAP21_like PA_hPAP21_like: Protease-associated 98.82
PF0592282 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IP 98.8
cd04816122 PA_SaNapH_like PA_SaNapH_like: Protease-associated 98.77
PF02225101 PA: PA domain; InterPro: IPR003137 The PA (Proteas 98.75
cd02122138 PA_GRAIL_like PA _GRAIL_like: Protease-associated 98.74
cd02130122 PA_ScAPY_like PA_ScAPY_like: Protease-associated d 98.73
cd04817139 PA_VapT_like PA_VapT_like: Protease-associated dom 98.73
cd04813117 PA_1 PA_1: Protease-associated (PA) domain subgrou 98.73
cd02124129 PA_PoS1_like PA_PoS1_like: Protease-associated (PA 98.71
cd02126126 PA_EDEM3_like PA_EDEM3_like: protease associated d 98.66
cd02132139 PA_GO-like PA_GO-like: Protease-associated domain 98.64
cd02125127 PA_VSR PA_VSR: Protease-associated (PA) domain-con 98.64
cd02123153 PA_C_RZF_like PA_C-RZF_ like: Protease-associated 98.62
cd00538126 PA PA: Protease-associated (PA) domain. The PA dom 98.52
cd04818118 PA_subtilisin_1 PA_subtilisin_1: Protease-associat 98.51
cd04819127 PA_2 PA_2: Protease-associated (PA) domain subgrou 98.37
cd04815134 PA_M28_2 PA_M28_2: Protease-associated (PA) domain 97.6
cd02128183 PA_TfR PA_TfR: Protease-associated domain containi 97.33
KOG3525431 consensus Subtilisin-like proprotein convertase [P 97.29
cd04814142 PA_M28_1 PA_M28_1: Protease-associated (PA) domain 97.16
cd04820137 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) do 97.03
cd04822151 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) do 96.95
KOG2442 541 consensus Uncharacterized conserved protein, conta 96.42
KOG4628348 consensus Predicted E3 ubiquitin ligase [Posttrans 96.26
cd02131153 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-asso 96.1
COG4934 1174 Predicted protease [Posttranslational modification 95.99
cd02121220 PA_GCPII_like PA_GCPII_like: Protease-associated d 95.61
KOG3920193 consensus Uncharacterized conserved protein, conta 94.85
cd04821157 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) do 89.4
PF0284542 CUE: CUE domain; InterPro: IPR003892 This domain m 81.37
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information 
Probab=100.00  E-value=5.9e-50  Score=435.22  Aligned_cols=416  Identities=20%  Similarity=0.201  Sum_probs=259.0

Q ss_pred             CCCCceEEEEecceecCCCCCCCCCCCCCCCCCC-CCCCccccCCCCCCCCCCCceEeeecchh-hHhhhccCCCCCCCC
Q 006605          152 RAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKIIGAQHFAE-AAIAARAFNPAVDFA  229 (639)
Q Consensus       152 ~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki~~~~~~~~-~~~~~~~~~~~~~~~  229 (639)
                      ++|+||+|||||||||+.||+|+..  ++.+++. .|++........      ....++..+.+ ..........+.+..
T Consensus         1 ltG~GV~VaVIDtGId~~hp~F~~~--dg~tRi~~~wDq~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~p~~~~   72 (455)
T cd07478           1 LTGKGVLVGIIDTGIDYLHPEFRNE--DGTTRILYIWDQTIPGGPPP------GGYYGGGEYTEEIINAALASDNPYDIV   72 (455)
T ss_pred             CCCCceEEEEEECCCCCCCHHHccC--CCCchhHHhhhCcCCCCCCC------ccccCceEEeHHHHHHHHhcCCccccC
Confidence            4899999999999999999999976  3445555 898876643221      12222222222 111111112223334


Q ss_pred             CCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCC----------CCHHHHHHHHHHHHhC
Q 006605          230 SPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFG----------GFVADVVAAIDQAVHD  299 (639)
Q Consensus       230 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~----------~~~s~i~~ai~~a~~~  299 (639)
                      ...|..||||||||||||+..++        ..+.||||+|+|+++|++...+.          +..+++++|++|+++.
T Consensus        73 ~~~D~~GHGThvAGIiag~~~~~--------~~~~GvAp~a~l~~vk~~~~~~~~~~~~~~~~~~~~~~i~~ai~~~~~~  144 (455)
T cd07478          73 PSRDENGHGTHVAGIAAGNGDNN--------PDFKGVAPEAELIVVKLKQAKKYLREFYEDVPFYQETDIMLAIKYLYDK  144 (455)
T ss_pred             cCCCCCCchHHHHHHHhcCCCCC--------CCccccCCCCcEEEEEeecCCCcccccccccccCcHHHHHHHHHHHHHH
Confidence            45789999999999999985431        34789999999999999988754          5788999999999873


Q ss_pred             -----CCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhC-CcEEEEecCCCCCCCCCcccCCCccEEEceeecCccee
Q 006605          300 -----GVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKA-GVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYK  373 (639)
Q Consensus       300 -----g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~-Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~  373 (639)
                           .+.|||||||...+++++    .+.++++++.+.++ |++||+||||+|....++.....   .     ....-.
T Consensus       145 a~~~~~p~VInlSlG~~~g~~~g----~~~l~~~i~~~~~~~gv~vV~aaGNeg~~~~h~~~~~~---~-----~~~~~~  212 (455)
T cd07478         145 ALELNKPLVINISLGTNFGSHDG----TSLLERYIDAISRLRGIAVVVGAGNEGNTQHHHSGGIV---P-----NGETKT  212 (455)
T ss_pred             HHHhCCCeEEEEccCcCCCCCCC----ccHHHHHHHHHHhhCCeEEEEeCCCCCCcCCceeeeec---c-----CCceEE
Confidence                 578999999998777665    67889999988876 99999999999986554432100   0     000011


Q ss_pred             eeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEeeecccccCcchhh
Q 006605          374 NHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCGYSFNFVTGTASIK  453 (639)
Q Consensus       374 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~r~~~~~~g~~~~~  453 (639)
                      -.+.++.++......++...+......++.+........  .......   ..........++.+..+.....+|...+.
T Consensus       213 ie~~v~~~~~~~~~eiW~~~~d~~~v~i~sP~Ge~~~~i--~~~~~~~---~~~~~~~~~t~i~v~y~~~~~~~g~~~i~  287 (455)
T cd07478         213 VELNVGEGEKGFNLEIWGDFPDRFSVSIISPSGESSGRI--NPGIGGS---ESYKFVFEGTTVYVYYYLPEPYTGDQLIF  287 (455)
T ss_pred             EEEEECCCCcceEEEEecCCCCEEEEEEECCCCCccCcc--CcCCCcc---eeEEEEECCeEEEEEEcCCCCCCCCeEEE
Confidence            122333333222223333333323333333221111000  0000000   00001112233444434333344544444


Q ss_pred             hhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeeccee---EEEccCc
Q 006605          454 KVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGT---GTIGDGL  530 (639)
Q Consensus       454 ~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~  530 (639)
                      .++.++. .|.|.+.++......+.    .+.|+|.-.+.. .+..+| .       .+|..++..+...   +++.   
T Consensus       288 i~~~~~~-~GiW~i~~~~~~~~~g~----~~~Wlp~~~~~~-~~t~f~-~-------~~~~~tit~Pa~~~~vitVg---  350 (455)
T cd07478         288 IRFKNIK-PGIWKIRLTGVSITDGR----FDAWLPSRGLLS-ENTRFL-E-------PDPYTTLTIPGTARSVITVG---  350 (455)
T ss_pred             EEccCCC-ccceEEEEEeccCCCce----EEEEecCcCcCC-CCCEee-c-------CCCCceEecCCCCCCcEEEE---
Confidence            4444443 48888888876443222    345677665543 222221 1       2233333332221   1111   


Q ss_pred             ccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCcCCCceEEEeeeccccccccccce
Q 006605          531 MPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANFVGKRICLDIWNQYGCTTYSRDSC  610 (639)
Q Consensus       531 ~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSmAaP~vaG~~a  610 (639)
                        .+....+.++.||||||+.+       +++||||+|||++|+|+++          ++.|..++|||||||||||++|
T Consensus       351 --a~~~~~~~~~~~Ss~G~~~~-------~~~kpdi~APG~~i~s~~~----------~~~~~~~sGTS~Aap~vaG~aA  411 (455)
T cd07478         351 --AYNQNNNSIAIFSGRGPTRD-------GRIKPDIAAPGVNILTASP----------GGGYTTRSGTSVAAAIVAGACA  411 (455)
T ss_pred             --EEeCCCCcccCccCCCcCCC-------CCcCceEEecCCCEEEeec----------CCcEEeeCcHHHHHHHHHHHHH
Confidence              12233457999999999985       9999999999999999987          5689999999999999999999


Q ss_pred             eccccC------CCCCHHHHHHHHhhcccccc
Q 006605          611 SCEAEA------PLLEPSCYKISIDDHNNEVG  636 (639)
Q Consensus       611 l~~~~~------p~~sp~~i~~~~~~~~~~~~  636 (639)
                      |+.|.+      |.|+|+|||.+|...-+..+
T Consensus       412 Ll~~~~~~~~~~p~~~~~~ik~~L~~tA~~~~  443 (455)
T cd07478         412 LLLQWGIVRGNDPYLYGEKIKTYLIRGARRRP  443 (455)
T ss_pred             HHHHhchhccCCCCCCHHHHHHHHHHhCccCC
Confidence            998865      56799999999998776554

GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>PTZ00262 subtilisin-like protease; Provisional Back     alignment and domain information
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family Back     alignment and domain information
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 Back     alignment and domain information
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 Back     alignment and domain information
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 Back     alignment and domain information
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 Back     alignment and domain information
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases Back     alignment and domain information
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification Back     alignment and domain information
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 Back     alignment and domain information
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04056 Peptidases_S53 Peptidase domain in the S53 family Back     alignment and domain information
>cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase Back     alignment and domain information
>cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like Back     alignment and domain information
>cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) Back     alignment and domain information
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) Back     alignment and domain information
>PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] Back     alignment and domain information
>cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like Back     alignment and domain information
>cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) Back     alignment and domain information
>cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 Back     alignment and domain information
>cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 Back     alignment and domain information
>cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like Back     alignment and domain information
>cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins Back     alignment and domain information
>cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 Back     alignment and domain information
>cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) Back     alignment and domain information
>cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like Back     alignment and domain information
>cd00538 PA PA: Protease-associated (PA) domain Back     alignment and domain information
>cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 Back     alignment and domain information
>cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 Back     alignment and domain information
>cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2 Back     alignment and domain information
>cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) Back     alignment and domain information
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1 Back     alignment and domain information
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1 Back     alignment and domain information
>cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3 Back     alignment and domain information
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] Back     alignment and domain information
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) Back     alignment and domain information
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like Back     alignment and domain information
>KOG3920 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] Back     alignment and domain information
>cd04821 PA_M28_1_2 PA_M28_1_2: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 2 Back     alignment and domain information
>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query639
3vta_A 621 Crystal Structure Of Cucumisin, A Subtilisin-Like E 1e-41
3i6s_A 649 Crystal Structure Of The Plant Subtilisin-Like Prot 7e-39
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  167 bits (424), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 205/448 (45%), Gaps = 55/448 (12%)
Query: 130 TTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRG 189
           TT + +FLG P  V        +   +IV+G +D+GI+P  PSF      P  P PK++G
Sbjct: 1   TTRSWDFLGFPLTV----PRRSQVESNIVVGVLDTGIWPESPSFDDEGFSP--PPPKWKG 54
Query: 190 KCEVDPDTKRSFCNGKIIGXXXXXXXXXXXXXXXXXVDFASPLDGDGHGSHTAAIAAGNN 249
            CE   + +   CN KIIG                  D   P D +GHG+HTA+ AAG  
Sbjct: 55  TCETSNNFR---CNRKIIGARSYHIGRPISPG-----DVNGPRDTNGHGTHTASTAAGGL 106
Query: 250 GIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFXXXXXXXXXXXXXXGVDILSLSVG 309
                ++G   G A G  P ARIA YK  +   G                GVDI+SLSVG
Sbjct: 107 VSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTDILAAYDDAIADGVDIISLSVG 165
Query: 310 PNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDD 369
             +P    +  F++   +    AV+ G+  + +AGNGGP   T  S SPW+ +VAA+  D
Sbjct: 166 GANP----RHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMD 221
Query: 370 RRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNK 429
           R++   + +GNG+   G+ ++  T  N+ + LV+  D+  ++   K ++  C    V N 
Sbjct: 222 RKFVTQVQIGNGQSFQGVSIN--TFDNQYYPLVSGRDI-PNTGFDKSTSRFCTDKSV-NP 277
Query: 430 NLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPG 489
           NL++G I++C  SF             E  KSL  A  VL   N        P+P     
Sbjct: 278 NLLKGKIVVCEASFG----------PHEFFKSLDGAAGVLMTSNTRDYADSYPLP----- 322
Query: 490 ILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGP 549
              + V    DL+     +T R     + S +  G        IL+ SAP V  FS+RGP
Sbjct: 323 ---SSVLDPNDLL-----ATLR----YIYSIRSPGATIFKSTTILNASAPVVVSFSSRGP 370
Query: 550 NIKDFSFQDADLLKPDILAPGSLIWAAW 577
           N         D++KPDI  PG  I AAW
Sbjct: 371 N-----RATKDVIKPDISGPGVEILAAW 393
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query639
3vta_A 621 Cucumisin; subtilisin-like fold, serine protease, 1e-105
3i6s_A 649 Subtilisin-like protease; PA-domain, FN3-domain, h 1e-104
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 9e-70
3afg_A539 Subtilisin-like serine protease; propeptide, therm 6e-24
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 3e-23
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 7e-20
3t41_A471 Epidermin leader peptide processing serine protea; 3e-19
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 1e-18
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 2e-18
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 2e-18
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 3e-18
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 5e-18
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 6e-18
2ixt_A310 36KDA protease; serine protease, sphericase, subti 2e-17
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 2e-17
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 3e-17
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 2e-16
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 4e-16
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 2e-15
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 2e-14
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 3e-14
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 3e-13
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 3e-12
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 8e-12
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 4e-11
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 2e-10
3f7m_A279 Alkaline serine protease VER112; verticillium psal 2e-10
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 4e-10
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-09
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 3e-08
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 7e-07
2w2n_P114 Proprotein convertase subtilisin/kexin type 9; hyd 4e-06
2qtw_A124 Proprotein convertase subtilisin/kexin type 9 Pro; 9e-06
3cnq_P80 Subtilisin BPN'; uncleaved, proenzyme, substrate c 6e-04
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 Back     alignment and structure
 Score =  330 bits (847), Expect = e-105
 Identities = 150/457 (32%), Positives = 213/457 (46%), Gaps = 55/457 (12%)

Query: 130 TTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRG 189
           TT + +FLG P  V            +IV+G +D+GI+P  PSF      P  P PK++G
Sbjct: 1   TTRSWDFLGFPLTVPRRSQ----VESNIVVGVLDTGIWPESPSFDDEGFSP--PPPKWKG 54

Query: 190 KCEVDPDTKRSFCNGKIIGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNN 249
            CE   +     CN KIIGA+ +      +       D   P D +GHG+HTA+ AAG  
Sbjct: 55  TCETSNN---FRCNRKIIGARSYHIGRPIS-----PGDVNGPRDTNGHGTHTASTAAGGL 106

Query: 250 GIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVG 309
                ++G   G A G  P ARIA YK  +   G    D++AA D A+ DGVDI+SLSVG
Sbjct: 107 VSQANLYGLGLGTARGGVPLARIAAYKVCWN-DGCSDTDILAAYDDAIADGVDIISLSVG 165

Query: 310 PNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDD 369
             +P       F++   +    AV+ G+  + +AGNGGP   T  S SPW+ +VAA+  D
Sbjct: 166 GANPR----HYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMD 221

Query: 370 RRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNK 429
           R++   + +GNG+   G+  S  T  N+ + LV+  D+   +   K ++  C   + +N 
Sbjct: 222 RKFVTQVQIGNGQSFQGV--SINTFDNQYYPLVSGRDIPN-TGFDKSTSRFCT-DKSVNP 277

Query: 430 NLVEGNILLCGYSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPG 489
           NL++G I++C  SF             E  KSL  A  VL   N        P+P     
Sbjct: 278 NLLKGKIVVCEASFGP----------HEFFKSLDGAAGVLMTSNTRDYADSYPLPS---- 323

Query: 490 ILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTGTIGDGLMPILHKSAPQVALFSARGP 549
             + D    +  + Y    + R     +  FK T         IL+ SAP V  FS+RGP
Sbjct: 324 -SVLDPNDLLATLRYIY--SIRSPGATI--FKST--------TILNASAPVVVSFSSRGP 370

Query: 550 NIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEAN 586
           N         D++KPDI  PG  I AAW         
Sbjct: 371 N-----RATKDVIKPDISGPGVEILAAWPSVAPVGGI 402
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 Back     alignment and structure
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P Length = 114 Back     alignment and structure
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P Length = 124 Back     alignment and structure
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B Length = 80 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query639
3i6s_A 649 Subtilisin-like protease; PA-domain, FN3-domain, h 100.0
3vta_A 621 Cucumisin; subtilisin-like fold, serine protease, 100.0
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 100.0
3afg_A 539 Subtilisin-like serine protease; propeptide, therm 100.0
2p4e_P 692 Proprotein convertase subtilisin/kexin type 9; pro 100.0
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 100.0
3t41_A471 Epidermin leader peptide processing serine protea; 100.0
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 100.0
1r6v_A 671 Subtilisin-like serine protease; sandwich domain, 100.0
2ixt_A310 36KDA protease; serine protease, sphericase, subti 100.0
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 100.0
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 100.0
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 100.0
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 100.0
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 100.0
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 100.0
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 100.0
3zxy_A282 Subtilisin-like protein; hydrolase; 1.58A {Prochlo 100.0
4h6x_A357 Thiazoline oxidase/subtilisin-like protease; hydro 100.0
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 100.0
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 100.0
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 100.0
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 100.0
4h6w_A306 N-terminal cyanobactin protease; hydrolase; 2.45A 100.0
1wmd_A 434 Protease; alpha-beta hydrolase fold, jelly-roll be 100.0
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 100.0
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 100.0
3f7m_A279 Alkaline serine protease VER112; verticillium psal 100.0
2qtw_B 546 Proprotein convertase subtilisin/kexin type 9; cor 100.0
1p8j_A 471 Furin precursor; prohormone convertase, SPC1, PACE 100.0
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 100.0
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 100.0
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 100.0
3hjr_A600 Extracellular serine protease; kexin, hydrolase; 1 100.0
1t1e_A552 Kumamolisin; proenzyme, prosubtilase, activation m 99.84
1ga6_A372 Serine-carboxyl proteinase; serine-carboxyl protei 99.76
3icu_A194 E3 ubiquitin-protein ligase RNF128; E3 ligase, ene 98.66
3cnq_P80 Subtilisin BPN'; uncleaved, proenzyme, substrate c 98.66
2w2n_P114 Proprotein convertase subtilisin/kexin type 9; hyd 98.6
3edy_A544 Tripeptidyl-peptidase 1; protease, TPP1, sedolisin 98.54
2qtw_A124 Proprotein convertase subtilisin/kexin type 9 Pro; 98.48
1v5i_B76 POIA1, IA-1=serine proteinase inhibitor; protease- 98.39
2ek8_A 421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 97.19
2z30_B65 TK-subtilisin; thermococcus kodakaraensis, hydrola 97.14
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 96.32
3kas_A 640 Transferrin receptor protein 1; transferrin recept 96.23
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 95.85
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 89.28
1y9z_A 441 Alkaline serine protease; subtilisin-like alpha/be 86.08
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Back     alignment and structure
Probab=100.00  E-value=2e-79  Score=692.20  Aligned_cols=453  Identities=32%  Similarity=0.497  Sum_probs=386.7

Q ss_pred             CCCCCcccCCCC--CCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCC-CCCCccccCCCCCCCCCCCce
Q 006605          130 TTHTPEFLGLPT--GVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVP-KYRGKCEVDPDTKRSFCNGKI  206 (639)
Q Consensus       130 ~~~~~~~~g~~~--~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki  206 (639)
                      ++++|+|+||.+  .+|..    +++|+||+|||||||||++||+|.+.+   +.+++ .|++.|+.+.+|+...||+|+
T Consensus         1 Tt~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~g---~~p~p~~wkg~c~~g~~f~~~~cN~ki   73 (649)
T 3i6s_A            1 TTHTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDDG---MPEIPKRWKGICKPGTQFNASMCNRKL   73 (649)
T ss_dssp             CCSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCTT---CCCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred             CCCChHHcCCCCchhhHhc----cCCCCCCEEEEEccCCCCCChhhccCC---CCCCccccccccccCccccccccccce
Confidence            356788999863  47776    689999999999999999999999874   56777 999999999999999999999


Q ss_pred             EeeecchhhHhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeecCCCCCH
Q 006605          207 IGAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFV  286 (639)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~  286 (639)
                      +++++|.++..... .+...+..+++|.+||||||||||||+..++.++.|+..+.+.||||+|+|+++|+++..+ +..
T Consensus        74 ig~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~  151 (649)
T 3i6s_A           74 IGANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-TFT  151 (649)
T ss_dssp             EEEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-ECH
T ss_pred             eeeEeccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-CCH
Confidence            99999998765443 4555566788999999999999999998777777777777789999999999999999864 899


Q ss_pred             HHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCCCCcccCCCccEEEcee
Q 006605          287 ADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAA  366 (639)
Q Consensus       287 s~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~  366 (639)
                      +++++||+||+++|+||||||||....     .+..+++..++++|.++||+||+||||+|+...++++.+||+|+|||+
T Consensus       152 ~~i~~Ai~~A~~~gvdVIn~SlG~~~~-----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAs  226 (649)
T 3i6s_A          152 SDLIAAMDQAVADGVDMISISYGYRFI-----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASG  226 (649)
T ss_dssp             HHHHHHHHHHHHTTCSEEEECCCCCSC-----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCEEEeCCccCCc-----ccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeee
Confidence            999999999999999999999998632     456789999999999999999999999999999999999999999999


Q ss_pred             ecCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCc--cccEEEEeeecc
Q 006605          367 IDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLV--EGNILLCGYSFN  444 (639)
Q Consensus       367 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~Gkivl~~r~~~  444 (639)
                      +.++.|...+.+|+++.+.|.+++........+++++..           ....|. +..++..++  +||||||.|   
T Consensus       227 t~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~-----------~~~~C~-~~~l~~~~vdl~GkIvlc~~---  291 (649)
T 3i6s_A          227 HTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK-----------TLSDCS-SEELLSQVENPENTIVICDD---  291 (649)
T ss_dssp             ECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT-----------TTTTCC-CHHHHTTSSSGGGCEEEECC---
T ss_pred             ecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc-----------cccccc-cccccccccccCCcEEEEeC---
Confidence            999999999999999999999988766556779998854           235687 345666666  999999998   


Q ss_pred             cccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeecceeE
Q 006605          445 FVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSFKGTG  524 (639)
Q Consensus       445 ~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~  524 (639)
                         |.|.+.+|..+++++|+.++|++++.    .........+|++.|.. ++++.|++|+++.  ++|..         
T Consensus       292 ---g~~~~~~k~~~~~~~Ga~g~i~~n~~----~~~~~~~~~~P~~~v~~-~~g~~i~~yi~s~--~~~~a---------  352 (649)
T 3i6s_A          292 ---NGDFSDQMRIITRARLKAAIFISEDP----GVFRSATFPNPGVVVNK-KEGKQVINYVKNS--VTPTA---------  352 (649)
T ss_dssp             ---CSCHHHHHHHHHHHTCSEEEEECCCG----GGGGCCCCCSCEEEECH-HHHHHHHHHHHTC--SSCEE---------
T ss_pred             ---CCccHHHHHHHHHhcCceEEEEecCc----cccccccCcCCEEEEcH-HHHHHHHHHHhcC--CCceE---------
Confidence               78999999999999999999999985    22334567899999998 9999999999986  45543         


Q ss_pred             EEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCCCCCc----CCCceEEEeeecc
Q 006605          525 TIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTDEANF----VGKRICLDIWNQY  600 (639)
Q Consensus       525 ~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~~~~~----~~~~y~~~sGTSm  600 (639)
                      +|.+..+.......+.+++||||||+.+     .+++|||||+|||++|+|||+.........    ....|.+||||||
T Consensus       353 ~i~~~~t~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSM  427 (649)
T 3i6s_A          353 TITFQETYLDTKPAPVVAASSARGPSRS-----YLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSM  427 (649)
T ss_dssp             EEEEEEEECCCSSCCEECTTSCCSSCTT-----CTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHH
T ss_pred             EEeecceeeccCCCCcccccCCCCCCCC-----CCCccCCeEEeCCCCeEeecCCCCCccccccccccccceeccccccc
Confidence            3444444455677899999999999986     589999999999999999998753321111    2368999999999


Q ss_pred             ccccccccceeccccCCCCCHHHHHHHHhhccccc
Q 006605          601 GCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEV  635 (639)
Q Consensus       601 AaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~  635 (639)
                      |||||||++||++|+||+|||++||++|+..-..+
T Consensus       428 AaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~  462 (649)
T 3i6s_A          428 AAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPL  462 (649)
T ss_dssp             HHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCB
T ss_pred             ccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccc
Confidence            99999999999999999999999999999865443
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Back     alignment and structure
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A Back     alignment and structure
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Back     alignment and structure
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} Back     alignment and structure
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A Back     alignment and structure
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* Back     alignment and structure
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} Back     alignment and structure
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B Back     alignment and structure
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P Back     alignment and structure
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* Back     alignment and structure
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P Back     alignment and structure
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 639
d1v6ca_435 c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud 6e-08
d1r6va_671 c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni 6e-07
d1dbia_280 c.41.1.1 (A:) Thermostable serine protease {Bacill 9e-07
d1ga6a_369 c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pse 1e-06
d1t1ga_357 c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bac 2e-05
d1to2e_281 c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie 1e-04
d1thma_279 c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar 2e-04
d1r0re_274 c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls 5e-04
d1gcia_269 c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 0.002
d1scjb_71 d.58.3.2 (B:) Subtilisin prosegment {Bacillus subt 0.002
d2id4a2339 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak 0.003
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Alkaline serine protease Apa1
species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]

 Score = 53.1 bits (126), Expect = 6e-08
 Identities = 30/231 (12%), Positives = 61/231 (26%), Gaps = 53/231 (22%)

Query: 151 DRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKIIGAQ 210
           D    +  I  +DSG    H                                        
Sbjct: 18  DSQAGNRTICIIDSGYDRSHN--------------------------------------- 38

Query: 211 HFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRA 270
                 +     +   ++  P + + HG+H A   A                  G+ P  
Sbjct: 39  DLNANNVTGTNNSGTGNWYQPGNNNAHGTHVAGTIAAIAN---------NEGVVGVMPNQ 89

Query: 271 RIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLL 330
              ++    ++F        +++  A+   V+    +V   S   +  TT     +    
Sbjct: 90  NANIHI--VKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGSTTTER--NALNT 145

Query: 331 AAVKAGVFVAQAAGNGGPFPKTLVSYSPWITTVAAAIDDRRYKNHLNLGNG 381
                 + +A AAGN G    +  +    + +VAA   +  +       + 
Sbjct: 146 HYNNGVLLIA-AAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQ 195
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Length = 369 Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Length = 357 Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 Back     information, alignment and structure
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} Length = 71 Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query639
d1r6va_ 671 Fervidolysin {Fervidobacterium pennivorans [TaxId: 100.0
d1v6ca_435 Alkaline serine protease Apa1 {Pseudoalteromonas s 100.0
d1dbia_280 Thermostable serine protease {Bacillus sp., AK.1 [ 100.0
d1r0re_274 Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 100.0
d1thma_279 Thermitase {Thermoactinomyces vulgaris [TaxId: 202 100.0
d1gcia_269 Subtilisin {Bacillus lentus [TaxId: 1467]} 100.0
d1to2e_281 Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' 100.0
d2pwaa1279 Proteinase K {Fungus (Tritirachium album), strain 100.0
d2ixta1309 Sphericase {Bacillus sphaericus [TaxId: 1421]} 100.0
d1wmda2318 Alkaline serine protease kp-43, N-terminal domain 100.0
d1p8ja2334 Furin, N-terminal domain {Mouse (Mus musculus) [Ta 99.97
d2id4a2339 Kexin, N-terminal domain {Baker's yeast (Saccharom 99.96
d1t1ga_357 Serine-carboxyl proteinase, SCP {Bacillus novosp. 99.91
d1ga6a_369 Serine-carboxyl proteinase, SCP {Pseudomonas sp., 99.89
d1scjb_71 Subtilisin prosegment {Bacillus subtilis [TaxId: 1 98.5
d1v5ib172 Proteinase A inhibitor 1, POIA1 {Oyster mushroom ( 98.39
d1de4c2193 Transferrin receptor ectodomain, apical domain {Hu 97.28
d3bi1a2233 Glutamate carboxypeptidase II {Human (Homo sapiens 96.26
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Fervidolysin
species: Fervidobacterium pennivorans [TaxId: 93466]

Probab=100.00  E-value=1e-46  Score=427.86  Aligned_cols=313  Identities=19%  Similarity=0.181  Sum_probs=227.2

Q ss_pred             eeEEEeecceeeEEEEEcCHHH----HHHH--HcCCCceEEEeeeeecccCC----CCCcc-------------------
Q 006605           86 YKKLYSYKHLINGFAVHITPDQ----AEIL--QRAPGVKSVERDWKVRRLTT----HTPEF-------------------  136 (639)
Q Consensus        86 ~~~~~~~~~~~~g~~~~~~~~~----~~~L--~~~p~V~~v~~~~~~~~~~~----~~~~~-------------------  136 (639)
                      .+++.++. .++.+.++++...    .+.+  ..+|+|++|||+...++...    ..+..                   
T Consensus        53 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~vep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (671)
T d1r6va_          53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL  131 (671)
T ss_dssp             CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred             CEEEEEec-ccceEEEEcCchhHHHHHHHHHHhcCCCceEECcceeEeeccccccCCCccccccccccccccccCcCccc
Confidence            34555554 4566777766432    2232  35899999999865543211    01110                   


Q ss_pred             ----cCC-----CCCCCCCCCCCCCCCCceEEEEecceecCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCceE
Q 006605          137 ----LGL-----PTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFGSHHTDPYGPVPKYRGKCEVDPDTKRSFCNGKII  207 (639)
Q Consensus       137 ----~g~-----~~~~w~~~~~~~~~G~gv~VaViDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~  207 (639)
                          |++     ++..|+     .++|+||+|||||||||++||+|.++                             ++
T Consensus       132 ~~~~w~l~~i~~~~a~~~-----~~tG~gV~VaViDtGvd~~Hpdl~~~-----------------------------~~  177 (671)
T d1r6va_         132 SNELWGLEAIGVTQQLWE-----EASGTNIIVAVVDTGVDGTHPDLEGQ-----------------------------VI  177 (671)
T ss_dssp             GGGCHHHHHTTCCHHHHH-----HCSCTTCEEEEEESCCBTTSGGGTTT-----------------------------BC
T ss_pred             cccCcChhhcCccHHHHh-----cCCCCCCEEEEEcCCcCCCChhhcCC-----------------------------cc
Confidence                111     111233     47899999999999999999999976                             22


Q ss_pred             eeecchhhHhhhccCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCceeeccCCCeEEEEEeeec------C
Q 006605          208 GAQHFAEAAIAARAFNPAVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYR------L  281 (639)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~------~  281 (639)
                      .++++..+.       ......++.|+++|||||||||+|..+.         .++.||||+|+|+++|++++      .
T Consensus       178 ~~~~~~~~~-------~~~~~~~~~d~~gHGT~VAGiiaa~~~~---------~g~~GvAp~a~l~~~rv~~~~~~~~~~  241 (671)
T d1r6va_         178 AGYRPAFDE-------ELPAGTDSSYGGSAGTHVAGTIAAKKDG---------KGIVGVAPGAKIMPIVIFDDPALVGGN  241 (671)
T ss_dssp             CEEEGGGTE-------EECTTCBCCTTCSHHHHHHHHHHCCCSS---------SSCCCSCTTSEEEEEESBCCHHHHCTT
T ss_pred             cCccccccC-------CCCCCCcCcccCCCCccccceeeeeccc---------cceeeecCcceEEEEEecccccccCCC
Confidence            222322210       0011234567889999999999997431         23789999999999999974      2


Q ss_pred             CCCCHHHHHHHHHHHHhCCCcEEEeccCCCCCCCCCCcCcccHHHHHHHHHHhCCcEEEEecCCCCCCC-CCcccCCCcc
Q 006605          282 FGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDVTLLAAVKAGVFVAQAAGNGGPFP-KTLVSYSPWI  360 (639)
Q Consensus       282 ~~~~~s~i~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~v  360 (639)
                      +....+++++||+||+++|++|||||||+..        ....+..+++.+.++|+++|+||||++.+. ..+|+..|++
T Consensus       242 g~~~~~~i~~ai~~a~~~g~~Vin~S~g~~~--------~~~~~~~ai~~a~~~gv~vV~aAGN~~~~~~~~~Pa~~~~v  313 (671)
T d1r6va_         242 GYVGDDYVAAGIIWATDHGAKVMNHSWGGWG--------YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGV  313 (671)
T ss_dssp             SBCCHHHHHHHHHHHHHTTCSEEEECEEBSC--------CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTC
T ss_pred             CcccHHHHHHHHHHHHhCCCcEEeccccccc--------CChHHHHHHHHHHhccCcEEEEEecCCCCccccCCccCCce
Confidence            3456788999999999999999999999742        356888999999999999999999998754 3556677888


Q ss_pred             EEEceeecCcceeeeeEeCCCeEEEeeccCCCCCCCceeeeEEccccccccccccCCCCcCCCCCCCccCCccccEEEEe
Q 006605          361 TTVAAAIDDRRYKNHLNLGNGKILAGIGLSPATHGNRTFTLVAANDVLLDSSVMKYSASDCQRPEVLNKNLVEGNILLCG  440 (639)
Q Consensus       361 itVgA~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~  440 (639)
                      |+|||++.+.                                                                      
T Consensus       314 i~Vga~~~~~----------------------------------------------------------------------  323 (671)
T d1r6va_         314 IQVAALDYYG----------------------------------------------------------------------  323 (671)
T ss_dssp             EEEEEEEEET----------------------------------------------------------------------
T ss_pred             EEEEEecCCC----------------------------------------------------------------------
Confidence            8888743110                                                                      


Q ss_pred             eecccccCcchhhhhHHHHHhcCCeEEEEeecCCCCCcccCCCcccccEEEEcCcchHHHHHHHHhcCCCcCCccceeec
Q 006605          441 YSFNFVTGTASIKKVSETAKSLGAAGFVLAVENVSPGTKFDPVPVGIPGILITDVTKSMDLVDYYNTSTTRDWTGRVKSF  520 (639)
Q Consensus       441 r~~~~~~g~~~~~~k~~~~~~~Ga~gvi~~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~l~~~~~~~~~~~~~~~~~~~  520 (639)
                                                                           .                          
T Consensus       324 -----------------------------------------------------~--------------------------  324 (671)
T d1r6va_         324 -----------------------------------------------------G--------------------------  324 (671)
T ss_dssp             -----------------------------------------------------T--------------------------
T ss_pred             -----------------------------------------------------C--------------------------
Confidence                                                                 0                          


Q ss_pred             ceeEEEccCcccccCCCccccccccCCCCCCCCCccCCCCcccccccCCCCceEEeeCCCCCC--------CCCcCCCce
Q 006605          521 KGTGTIGDGLMPILHKSAPQVALFSARGPNIKDFSFQDADLLKPDILAPGSLIWAAWSPNGTD--------EANFVGKRI  592 (639)
Q Consensus       521 ~~~~~i~~~~~~~~~~~~~~ia~FSS~GPt~~~~~~~~~~~lKPDI~APG~~I~Sa~~~~~~~--------~~~~~~~~y  592 (639)
                                       ...+++||+|||.             |||+|||++|+|+++.....        .....++.|
T Consensus       325 -----------------~~~~a~fS~~g~~-------------~dv~APG~~i~st~~~~~~~~~~~~~~~~~~~~~~~y  374 (671)
T d1r6va_         325 -----------------TFRVAGFSSRSDG-------------VSVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTY  374 (671)
T ss_dssp             -----------------EEEECSSSCCCTT-------------EEEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCE
T ss_pred             -----------------cceeeeccCCCCC-------------ceEEecCCCeEeecCCCCccccccccccccccCCCee
Confidence                             0023789999984             69999999999998753221        112346789


Q ss_pred             EEEeeeccccccccccceeccccCCCCCHHHHHHHHhhcccccc
Q 006605          593 CLDIWNQYGCTTYSRDSCSCEAEAPLLEPSCYKISIDDHNNEVG  636 (639)
Q Consensus       593 ~~~sGTSmAaP~vaG~~al~~~~~p~~sp~~i~~~~~~~~~~~~  636 (639)
                      ..++|||||||||||++||++|++|+|||.|||.+|++...+.+
T Consensus       375 ~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~  418 (671)
T d1r6va_         375 DYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFN  418 (671)
T ss_dssp             EEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSS
T ss_pred             eeecCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence            99999999999999999999999999999999999998877654
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Back     information, alignment and structure
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]} Back     information, alignment and structure
>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure