Citrus Sinensis ID: 006606
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 639 | 2.2.26 [Sep-21-2011] | |||||||
| O55236 | 597 | mRNA-capping enzyme OS=Mu | yes | no | 0.782 | 0.837 | 0.336 | 1e-74 | |
| O60942 | 597 | mRNA-capping enzyme OS=Ho | yes | no | 0.784 | 0.839 | 0.338 | 8e-74 | |
| Q6NY98 | 598 | mRNA-capping enzyme OS=Da | yes | no | 0.774 | 0.827 | 0.344 | 4e-71 | |
| Q17607 | 623 | mRNA-capping enzyme OS=Ca | yes | no | 0.807 | 0.828 | 0.305 | 8e-67 | |
| P40997 | 402 | mRNA-capping enzyme subun | yes | no | 0.541 | 0.860 | 0.312 | 5e-36 | |
| Q6FQ31 | 449 | mRNA-capping enzyme subun | yes | no | 0.460 | 0.654 | 0.306 | 1e-30 | |
| Q7SB53 | 402 | mRNA-capping enzyme subun | N/A | no | 0.471 | 0.748 | 0.276 | 3e-30 | |
| Q6CWR0 | 466 | mRNA-capping enzyme subun | yes | no | 0.502 | 0.688 | 0.287 | 4e-28 | |
| P78587 | 449 | mRNA-capping enzyme subun | N/A | no | 0.489 | 0.697 | 0.290 | 8e-28 | |
| Q01159 | 459 | mRNA-capping enzyme subun | yes | no | 0.464 | 0.647 | 0.294 | 4e-27 |
| >sp|O55236|MCE1_MOUSE mRNA-capping enzyme OS=Mus musculus GN=Rngtt PE=1 SV=1 | Back alignment and function desciption |
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Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 293/586 (50%), Gaps = 86/586 (14%)
Query: 84 NKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGL 143
NK+PP WL+CP GQ + G +P K L ++ + R+ + + L+ L K+ L
Sbjct: 4 NKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSL 63
Query: 144 VIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKY 203
++DLTNT+R+Y +D++KEGIK++K+QCKG P + F+ +F ++ +
Sbjct: 64 LVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERF--NERSPPEL 121
Query: 204 ILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKR 263
I VHCTHG NRTG++I FL+ S+ A+ FA+ RPPGIYK +Y++ L+ Y +
Sbjct: 122 IGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIE 181
Query: 264 LDSTPCPSTPEW------------------------------KRELDLNGEAVPDDDDDG 293
++ P P P+W K L L + G
Sbjct: 182 -EAPPPPVLPDWCFEDEDEEDEDEDGKKDSEPGSSASFSKRRKERLKLGAIFLEGITVKG 240
Query: 294 VPAAALHGR-GNMQ-------------FPGSHPVSLNSDNLQLLRQRYYYATWKADGTRY 339
V + G +Q FPG+ PVS++ N++LL Q+ Y +WKADGTRY
Sbjct: 241 VTQVTTQPKLGEVQQKCHQFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRY 300
Query: 340 MMLI-TIDGCYLIDRCFN-FRRVQMRFPCRNSNEGLGEKTHHF--TLLDGEMIIDKLPDS 395
MMLI + ++IDR + F + FP R + H TLLDGEMIIDK+ +
Sbjct: 301 MMLIDGTNEVFMIDRDNSVFHVSNLEFPFRK------DLRMHLSNTLLDGEMIIDKV--N 352
Query: 396 RRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLE 455
+ RYLIYD++ N V + F R + +E+E+I PR+ + + E
Sbjct: 353 GQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMKTGLIDKT------QE 406
Query: 456 PFRVRRKDFWLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMN 514
PF VR K F+ ++ KLL+ F ++SH+ DGL+FQ Y P + +LKWK +N
Sbjct: 407 PFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIGK-YKPGRCDDILKWKPPSLN 465
Query: 515 SVDFLFEVT--------DDDRQLLYV--FERGKKKLMEGSSVEFTDREPSFYSGKIIECT 564
SVDF ++T + LLYV +ER ++ +E Y KIIEC
Sbjct: 466 SVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIK-------VTKELKQYDNKIIECK 518
Query: 565 WDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEI 610
++ + W MR R DKS PN NT V SI + +T+E+L I
Sbjct: 519 FENNS--WVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEFI 562
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Bifunctional mRNA-capping enzyme exhibiting RNA 5'-triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. Mus musculus (taxid: 10090) EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 5EC: 0 |
| >sp|O60942|MCE1_HUMAN mRNA-capping enzyme OS=Homo sapiens GN=RNGTT PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6NY98|MCE1_DANRE mRNA-capping enzyme OS=Danio rerio GN=rngtt PE=2 SV=1 | Back alignment and function description |
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| >sp|Q17607|MCE1_CAEEL mRNA-capping enzyme OS=Caenorhabditis elegans GN=cel-1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P40997|MCE1_SCHPO mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ceg1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6FQ31|MCE1_CANGA mRNA-capping enzyme subunit alpha OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CEG1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7SB53|MCE1_NEUCR mRNA-capping enzyme subunit alpha OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU06260 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q6CWR0|MCE1_KLULA mRNA-capping enzyme subunit alpha OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=CEG1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P78587|MCE1_CANAX mRNA-capping enzyme subunit alpha OS=Candida albicans GN=CGT1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q01159|MCE1_YEAST mRNA-capping enzyme subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CEG1 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 639 | ||||||
| 356504293 | 684 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.998 | 0.932 | 0.744 | 0.0 | |
| 356496154 | 683 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.996 | 0.932 | 0.744 | 0.0 | |
| 225440606 | 677 | PREDICTED: mRNA-capping enzyme [Vitis vi | 0.989 | 0.933 | 0.729 | 0.0 | |
| 224087675 | 686 | predicted protein [Populus trichocarpa] | 0.998 | 0.930 | 0.719 | 0.0 | |
| 356520983 | 678 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.992 | 0.935 | 0.717 | 0.0 | |
| 357468627 | 684 | mRNA-capping enzyme [Medicago truncatula | 0.990 | 0.925 | 0.738 | 0.0 | |
| 356568041 | 681 | PREDICTED: mRNA-capping enzyme-like [Gly | 0.993 | 0.932 | 0.728 | 0.0 | |
| 449460315 | 682 | PREDICTED: mRNA-capping enzyme-like [Cuc | 0.996 | 0.934 | 0.716 | 0.0 | |
| 357468629 | 579 | mRNA-capping enzyme [Medicago truncatula | 0.837 | 0.924 | 0.753 | 0.0 | |
| 42572335 | 672 | mRNA capping enzyme-like protein [Arabid | 0.974 | 0.927 | 0.656 | 0.0 |
| >gi|356504293|ref|XP_003520931.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/685 (74%), Positives = 565/685 (82%), Gaps = 47/685 (6%)
Query: 1 MIGAMDLNASPLPEEDEDTFEG--HIEEY-AAQERIESGAEILRREREERRRRLKRDRPD 57
MI AMDLNASP+PEEDED FE H+EE+ +ERIE+GA+I RREREER+RRLKR+RPD
Sbjct: 1 MIVAMDLNASPVPEEDEDIFEEKIHVEEFHEPEERIETGADIARREREERKRRLKRERPD 60
Query: 58 DRPVHAYQPAMHDQYYQNKNYKSYDRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFND 117
DRPVH Q +DQ + KN +SYD+++LPPGWLDCP GQEI C+IPSKVPL E FND
Sbjct: 61 DRPVHVSQSHAYDQLFHTKNQRSYDKSRLPPGWLDCPSSGQEIC-CMIPSKVPLGESFND 119
Query: 118 CIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAV 177
CIPPGKRYSFKQVIHQ RVLGRKLGLVIDLTNTTRYYP SDLKKE IKHVKIQC+GR++V
Sbjct: 120 CIPPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKECIKHVKIQCRGRNSV 179
Query: 178 PDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKK 237
PDN SVN FVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMI+H+LMR+ SMSV QAIK
Sbjct: 180 PDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKI 239
Query: 238 FAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR--ELDLNGEA---------- 285
F+E R PGIYK +YI+ALYTFYHEK+ + CP TPEWKR E DLNGEA
Sbjct: 240 FSEARTPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVP 299
Query: 286 -----------------------VPDDDDDGV-------PAAALHGRGNMQFPGSHPVSL 315
+P D D + + RG+ QFPGSHPVSL
Sbjct: 300 DPDLQENHETDTRMTNDDVLGDEIPTDQQDALRQFCYQTLKLGVGARGHTQFPGSHPVSL 359
Query: 316 NSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEGLGE 375
N DNLQLLRQRYYYATWKADGTRYMMLIT+DGCYLIDR FNFRRVQMRFPCR++N+GLGE
Sbjct: 360 NRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGE 419
Query: 376 KTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPR 435
KTHHFTLLDGEM+ID LPDS++QERRYLIYDMMAINQ S+IERPFYERWKMLEKEVIEPR
Sbjct: 420 KTHHFTLLDGEMVIDTLPDSQKQERRYLIYDMMAINQVSIIERPFYERWKMLEKEVIEPR 479
Query: 436 NYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDD 495
N+ERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTV KLLKEFI +LSH+ADGL+FQGWDD
Sbjct: 480 NHERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDD 539
Query: 496 PYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTD-REPS 554
PY+PRTHEGLLKWKYA +NSVDFLFEV D DR+LL++ ERGKKKL+EG+ VEFTD +PS
Sbjct: 540 PYIPRTHEGLLKWKYAYLNSVDFLFEVVDGDRELLFLNERGKKKLLEGNRVEFTDGSDPS 599
Query: 555 FYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEII 614
YSGKIIEC+WD D WK MRIRTDKSTPN+ NTYRKV+RSIRDNITEE LLNEI EII
Sbjct: 600 LYSGKIIECSWDFDKLEWKYMRIRTDKSTPNEFNTYRKVLRSIRDNITEEDLLNEISEII 659
Query: 615 RLPMYADRIRNDSKAHLHTSSARRR 639
RLPMYADRIR DSKA+ H + ARRR
Sbjct: 660 RLPMYADRIRIDSKANQHANVARRR 684
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496154|ref|XP_003516935.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225440606|ref|XP_002277969.1| PREDICTED: mRNA-capping enzyme [Vitis vinifera] gi|297740251|emb|CBI30433.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224087675|ref|XP_002308205.1| predicted protein [Populus trichocarpa] gi|222854181|gb|EEE91728.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356520983|ref|XP_003529138.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357468627|ref|XP_003604598.1| mRNA-capping enzyme [Medicago truncatula] gi|355505653|gb|AES86795.1| mRNA-capping enzyme [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356568041|ref|XP_003552222.1| PREDICTED: mRNA-capping enzyme-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449460315|ref|XP_004147891.1| PREDICTED: mRNA-capping enzyme-like [Cucumis sativus] gi|449506444|ref|XP_004162751.1| PREDICTED: mRNA-capping enzyme-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357468629|ref|XP_003604599.1| mRNA-capping enzyme [Medicago truncatula] gi|355505654|gb|AES86796.1| mRNA-capping enzyme [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|42572335|ref|NP_974263.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] gi|332641202|gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 639 | ||||||
| TAIR|locus:2095284 | 672 | AT3G09100 [Arabidopsis thalian | 0.507 | 0.482 | 0.748 | 5.5e-237 | |
| TAIR|locus:2150154 | 657 | AT5G01290 [Arabidopsis thalian | 0.505 | 0.491 | 0.708 | 2.3e-218 | |
| TAIR|locus:2147575 | 625 | AT5G28210 [Arabidopsis thalian | 0.513 | 0.524 | 0.551 | 5.7e-165 | |
| UNIPROTKB|E2R9G2 | 597 | RNGTT "Uncharacterized protein | 0.442 | 0.474 | 0.379 | 3.8e-76 | |
| UNIPROTKB|Q2KHX7 | 595 | RNGTT "RNA guanylyltransferase | 0.442 | 0.475 | 0.376 | 1.1e-75 | |
| UNIPROTKB|O60942 | 597 | RNGTT "mRNA-capping enzyme" [H | 0.442 | 0.474 | 0.376 | 1.7e-75 | |
| UNIPROTKB|E1C254 | 600 | RNGTT "Uncharacterized protein | 0.302 | 0.321 | 0.404 | 2.2e-75 | |
| ZFIN|ZDB-GENE-040426-2087 | 598 | rngtt "RNA guanylyltransferase | 0.441 | 0.471 | 0.379 | 9.6e-75 | |
| RGD|1311410 | 597 | Rngtt "RNA guanylyltransferase | 0.442 | 0.474 | 0.379 | 1.2e-74 | |
| MGI|MGI:1329041 | 597 | Rngtt "RNA guanylyltransferase | 0.442 | 0.474 | 0.376 | 4.4e-74 |
| TAIR|locus:2095284 AT3G09100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1337 (475.7 bits), Expect = 5.5e-237, Sum P(2) = 5.5e-237
Identities = 247/330 (74%), Positives = 283/330 (85%)
Query: 301 GRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRV 360
GRG QFPGSHPVSLN +NLQLLRQRYYYATWKADGTRYMML+T DGCY++DR F FRRV
Sbjct: 344 GRGCSQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLLTTDGCYIVDRSFRFRRV 403
Query: 361 QMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPF 420
QMRFP R+ EG+ +K HHFTLLDGEMIID LPD ++QERRYLIYDM+AIN SV+ERPF
Sbjct: 404 QMRFPFRHPTEGISDKVHHFTLLDGEMIIDTLPDKQKQERRYLIYDMVAINGQSVVERPF 463
Query: 421 YERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPK 480
YERWKMLEKEVI+PRN+E+ +R+ YRYDLEPFRVRRKDFWLLS V K+LK FIP
Sbjct: 464 YERWKMLEKEVIDPRNHEK-----ARSHIYRYDLEPFRVRRKDFWLLSAVEKVLKGFIPS 518
Query: 481 LSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGKKKL 540
LSH+ADGL+FQGWDDPYVPRTHEGLLKWKY MNSVDFL+E + R +L +FERGKKK
Sbjct: 519 LSHEADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLYEQDESGRGMLSLFERGKKKH 578
Query: 541 MEGSSVEFTD-REPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRD 599
M+G+SV F D +P+ YSGKI+EC+WD D ++W MR+R DKSTPNDINT+RKVMRSI+D
Sbjct: 579 MDGNSVVFRDDSDPAEYSGKIVECSWDQDEKVWVSMRVRVDKSTPNDINTFRKVMRSIKD 638
Query: 600 NITEEVLLNEIQEIIRLPMYADRIRNDSKA 629
NITEEVLL EI+EIIRLPMYADRI+ DSKA
Sbjct: 639 NITEEVLLQEIREIIRLPMYADRIQMDSKA 668
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| TAIR|locus:2150154 AT5G01290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2147575 AT5G28210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R9G2 RNGTT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2KHX7 RNGTT "RNA guanylyltransferase and 5'-phosphatase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O60942 RNGTT "mRNA-capping enzyme" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C254 RNGTT "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-2087 rngtt "RNA guanylyltransferase and 5'-phosphatase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| RGD|1311410 Rngtt "RNA guanylyltransferase and 5'-phosphatase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:1329041 Rngtt "RNA guanylyltransferase and 5'-phosphatase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q17607 | MCE1_CAEEL | 2, ., 7, ., 7, ., 5, 0 | 0.305 | 0.8075 | 0.8282 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | 0.691 |
| 3rd Layer | 2.7.7 | 0.691 |
| 3rd Layer | 3.1.3.16 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.33 | LOW CONFIDENCE prediction! |
| 4th Layer | 2.7.7.50 | 0.737 |
| 3rd Layer | 3.1.3.48 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | AT3G09100 | mRNA capping enzyme family protein; mRNA capping enzyme family protein; FUNCTIONS IN- in 7 functions; INVOLVED IN- in 7 processes; LOCATED IN- nucleus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nucleic acid-binding, OB-fold (InterPro-IPR012340), Protein-tyrosine phosphatase (InterPro-IPR000387), ATP dependent DNA ligase, central (InterPro-IPR012310), mRNA capping enzyme, bifunctional (InterPro-IPR017074), mRNA capping enzyme (InterPro-IPR001339), Protein-tyrosine phosphatase, active site (InterPro-IPR016130), Nucleic acid-binding [...] (672 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
 | NRPB1 | • | • | 0.913 | |||||||
 | UVH6 | • | 0.910 | ||||||||
 | NRPB4 | • | 0.909 | ||||||||
 | NRPB7 | • | 0.907 | ||||||||
 | AT1G18340 | • | 0.906 | ||||||||
 | NRPB2 | • | • | 0.905 | |||||||
 | AT5G01290 | • | • | • | 0.904 | ||||||
 | AT3G20650 | • | • | 0.903 | |||||||
 | AT1G61700 | • | 0.902 | ||||||||
 | NRPB10 | • | 0.902 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 639 | |||
| cd07895 | 215 | cd07895, Adenylation_mRNA_capping, Adenylation dom | 3e-86 | |
| pfam01331 | 193 | pfam01331, mRNA_cap_enzyme, mRNA capping enzyme, c | 6e-82 | |
| COG5226 | 404 | COG5226, CEG1, mRNA capping enzyme, guanylyltransf | 3e-51 | |
| pfam03919 | 105 | pfam03919, mRNA_cap_C, mRNA capping enzyme, C-term | 7e-30 | |
| cd06846 | 182 | cd06846, Adenylation_DNA_ligase_like, Adenylation | 8e-13 | |
| smart00195 | 138 | smart00195, DSPc, Dual specificity phosphatase, ca | 2e-10 | |
| pfam00782 | 131 | pfam00782, DSPc, Dual specificity phosphatase, cat | 1e-08 | |
| cd00127 | 139 | cd00127, DSPc, Dual specificity phosphatases (DSP) | 1e-07 | |
| COG2453 | 180 | COG2453, CDC14, Predicted protein-tyrosine phospha | 3e-04 |
| >gnl|CDD|185706 cd07895, Adenylation_mRNA_capping, Adenylation domain of GTP-dependent mRNA capping enzymes | Back alignment and domain information |
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Score = 268 bits (687), Expect = 3e-86
Identities = 97/216 (44%), Positives = 124/216 (57%), Gaps = 12/216 (5%)
Query: 296 AAALHGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITI-DGCYLIDRC 354
A G FPGS PVS + NL+LL+Q Y+ K+DG RY++LIT YLIDR
Sbjct: 11 AELCPGWERGGFPGSQPVSFSRKNLELLKQNDYFVCEKSDGVRYLLLITGRGEVYLIDRK 70
Query: 355 FNFRRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQAS 414
+ +V F R N E H TLLDGE++IDK+P + RYLI+D++A N S
Sbjct: 71 NDVFKVPGLFFPRRKNL---EPHHQGTLLDGELVIDKVPGK--KRPRYLIFDILAFNGQS 125
Query: 415 VIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLL 474
V E+P ER K ++KEVIEPRN EPF VR KDF+ L + KL
Sbjct: 126 VTEKPLSERLKYIKKEVIEPRNELLKK------GPIDKAKEPFSVRLKDFFPLYKIEKLF 179
Query: 475 KEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKY 510
++ IPKL H+ DGL+F D+PYVP T + LLKWK
Sbjct: 180 EKIIPKLPHENDGLIFTPNDEPYVPGTDKNLLKWKP 215
|
RNA capping enzymes transfer GMP from GTP to the 5'-diphosphate end of nascent mRNAs to form a G(5')ppp(5')RNA cap structure. The RNA cap is found only in eukarya. RNA capping is chemically analogous to the first two steps of polynucleotide ligation. ATP-dependent polynucleotide ligases catalyze phosphodiester bond formation of nicked nucleic acid substrates using the high energy nucleotide of ATP as a cofactor in a three step reaction mechanism. Structural studies reveal a shared structure for DNA ligases and capping enzymes, with a common catalytic core composed of an adenylation or nucleotidyltransferase domain and a C-terminal OB-fold domain containing conserved sequence motifs. The adenylation domain binds ATP and contains many active site residues. Length = 215 |
| >gnl|CDD|216438 pfam01331, mRNA_cap_enzyme, mRNA capping enzyme, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|227551 COG5226, CEG1, mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >gnl|CDD|217793 pfam03919, mRNA_cap_C, mRNA capping enzyme, C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|185704 cd06846, Adenylation_DNA_ligase_like, Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases | Back alignment and domain information |
|---|
| >gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|216117 pfam00782, DSPc, Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|238073 cd00127, DSPc, Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >gnl|CDD|225297 COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 639 | |||
| COG5226 | 404 | CEG1 mRNA capping enzyme, guanylyltransferase (alp | 100.0 | |
| KOG2386 | 393 | consensus mRNA capping enzyme, guanylyltransferase | 100.0 | |
| PF01331 | 192 | mRNA_cap_enzyme: mRNA capping enzyme, catalytic do | 100.0 | |
| cd07895 | 215 | Adenylation_mRNA_capping Adenylation domain of GTP | 100.0 | |
| cd06846 | 182 | Adenylation_DNA_ligase_like Adenylation domain of | 99.95 | |
| KOG1719 | 183 | consensus Dual specificity phosphatase [Defense me | 99.93 | |
| cd07898 | 201 | Adenylation_DNA_ligase Adenylation domain of ATP-d | 99.91 | |
| PTZ00242 | 166 | protein tyrosine phosphatase; Provisional | 99.91 | |
| cd07903 | 225 | Adenylation_DNA_ligase_IV Adenylation domain of DN | 99.9 | |
| PTZ00393 | 241 | protein tyrosine phosphatase; Provisional | 99.9 | |
| cd07897 | 207 | Adenylation_DNA_ligase_Bac1 Adenylation domain of | 99.88 | |
| KOG1720 | 225 | consensus Protein tyrosine phosphatase CDC14 [Defe | 99.87 | |
| cd07906 | 190 | Adenylation_DNA_ligase_LigD_LigC Adenylation domai | 99.87 | |
| cd07901 | 207 | Adenylation_DNA_ligase_Arch_LigB Adenylation domai | 99.87 | |
| cd07900 | 219 | Adenylation_DNA_ligase_I_Euk Adenylation domain of | 99.86 | |
| cd07905 | 194 | Adenylation_DNA_ligase_LigC Adenylation domain of | 99.86 | |
| PF03919 | 105 | mRNA_cap_C: mRNA capping enzyme, C-terminal domain | 99.85 | |
| cd08039 | 235 | Adenylation_DNA_ligase_Fungal Adenylation domain o | 99.85 | |
| PRK07636 | 275 | ligB ATP-dependent DNA ligase; Reviewed | 99.85 | |
| TIGR02779 | 298 | NHEJ_ligase_lig DNA polymerase LigD, ligase domain | 99.85 | |
| PRK08224 | 350 | ligC ATP-dependent DNA ligase; Reviewed | 99.84 | |
| PRK09247 | 539 | ATP-dependent DNA ligase; Validated | 99.84 | |
| cd07902 | 213 | Adenylation_DNA_ligase_III Adenylation domain of D | 99.84 | |
| PRK09633 | 610 | ligD ATP-dependent DNA ligase; Reviewed | 99.83 | |
| TIGR00574 | 514 | dnl1 DNA ligase I, ATP-dependent (dnl1). All prote | 99.83 | |
| PHA02587 | 488 | 30 DNA ligase; Provisional | 99.82 | |
| cd09232 | 186 | Snurportin-1_C C-terminal m3G cap-binding domain o | 99.82 | |
| smart00195 | 138 | DSPc Dual specificity phosphatase, catalytic domai | 99.82 | |
| PF00782 | 133 | DSPc: Dual specificity phosphatase, catalytic doma | 99.81 | |
| PRK03180 | 508 | ligB ATP-dependent DNA ligase; Reviewed | 99.81 | |
| PF01068 | 202 | DNA_ligase_A_M: ATP dependent DNA ligase domain; I | 99.8 | |
| PLN03113 | 744 | DNA ligase 1; Provisional | 99.8 | |
| PRK01109 | 590 | ATP-dependent DNA ligase; Provisional | 99.8 | |
| PRK09632 | 764 | ATP-dependent DNA ligase; Reviewed | 99.79 | |
| KOG1718 | 198 | consensus Dual specificity phosphatase [Defense me | 99.78 | |
| PRK05972 | 860 | ligD ATP-dependent DNA ligase; Reviewed | 99.77 | |
| COG1793 | 444 | CDC9 ATP-dependent DNA ligase [DNA replication, re | 99.77 | |
| PHA00454 | 315 | ATP-dependent DNA ligase | 99.76 | |
| cd00127 | 139 | DSPc Dual specificity phosphatases (DSP); Ser/Thr | 99.75 | |
| PRK09125 | 282 | DNA ligase; Provisional | 99.73 | |
| cd07896 | 174 | Adenylation_kDNA_ligase_like Adenylation domain of | 99.71 | |
| KOG2836 | 173 | consensus Protein tyrosine phosphatase IVA1 [Signa | 99.69 | |
| KOG1717 | 343 | consensus Dual specificity phosphatase [Defense me | 99.68 | |
| PRK12361 | 547 | hypothetical protein; Provisional | 99.68 | |
| KOG1716 | 285 | consensus Dual specificity phosphatase [Defense me | 99.67 | |
| TIGR02776 | 552 | NHEJ_ligase_prk DNA ligase D. Members of this prot | 99.58 | |
| KOG2386 | 393 | consensus mRNA capping enzyme, guanylyltransferase | 99.57 | |
| KOG2283 | 434 | consensus Clathrin coat dissociation kinase GAK/PT | 99.56 | |
| KOG0966 | 881 | consensus ATP-dependent DNA ligase IV [Replication | 99.54 | |
| COG2453 | 180 | CDC14 Predicted protein-tyrosine phosphatase [Sign | 99.48 | |
| KOG0967 | 714 | consensus ATP-dependent DNA ligase I [Replication, | 99.29 | |
| PF05706 | 168 | CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3) | 99.23 | |
| PF03162 | 164 | Y_phosphatase2: Tyrosine phosphatase family; Inter | 99.17 | |
| cd07894 | 342 | Adenylation_RNA_ligase Adenylation domain of RNA c | 99.07 | |
| smart00012 | 105 | PTPc_DSPc Protein tyrosine phosphatase, catalytic | 99.07 | |
| smart00404 | 105 | PTPc_motif Protein tyrosine phosphatase, catalytic | 99.07 | |
| TIGR01244 | 135 | conserved hypothetical protein TIGR01244. No membe | 98.93 | |
| cd00047 | 231 | PTPc Protein tyrosine phosphatases (PTP) catalyze | 98.82 | |
| PRK15375 | 535 | pathogenicity island 1 effector protein StpP; Prov | 98.71 | |
| PLN02727 | 986 | NAD kinase | 98.69 | |
| smart00194 | 258 | PTPc Protein tyrosine phosphatase, catalytic domai | 98.66 | |
| PF14566 | 149 | PTPlike_phytase: Inositol hexakisphosphate; PDB: 1 | 98.33 | |
| PF04273 | 110 | DUF442: Putative phosphatase (DUF442); InterPro: I | 98.32 | |
| PHA02740 | 298 | protein tyrosine phosphatase; Provisional | 98.3 | |
| PF13350 | 164 | Y_phosphatase3: Tyrosine phosphatase family; PDB: | 98.24 | |
| PF00102 | 235 | Y_phosphatase: Protein-tyrosine phosphatase; Inter | 98.21 | |
| PHA02742 | 303 | protein tyrosine phosphatase; Provisional | 98.21 | |
| PHA02747 | 312 | protein tyrosine phosphatase; Provisional | 98.2 | |
| PHA02746 | 323 | protein tyrosine phosphatase; Provisional | 98.16 | |
| KOG1572 | 249 | consensus Predicted protein tyrosine phosphatase [ | 98.01 | |
| KOG3132 | 325 | consensus m3G-cap-specific nuclear import receptor | 97.98 | |
| KOG0790 | 600 | consensus Protein tyrosine phosphatase Corkscrew a | 97.98 | |
| PHA02738 | 320 | hypothetical protein; Provisional | 97.97 | |
| COG2365 | 249 | Protein tyrosine/serine phosphatase [Signal transd | 97.84 | |
| KOG0792 | 1144 | consensus Protein tyrosine phosphatase PTPMEG, con | 97.79 | |
| COG3453 | 130 | Uncharacterized protein conserved in bacteria [Fun | 97.78 | |
| COG5599 | 302 | PTP2 Protein tyrosine phosphatase [Signal transduc | 97.53 | |
| TIGR01209 | 374 | RNA ligase, Pab1020 family. Members of this family | 97.4 | |
| KOG0791 | 374 | consensus Protein tyrosine phosphatase, contains f | 97.36 | |
| COG5350 | 172 | Predicted protein tyrosine phosphatase [General fu | 97.16 | |
| KOG0789 | 415 | consensus Protein tyrosine phosphatase [Signal tra | 97.03 | |
| COG1423 | 382 | ATP-dependent DNA ligase, homolog of eukaryotic li | 96.89 | |
| PF14671 | 141 | DSPn: Dual specificity protein phosphatase, N-term | 96.39 | |
| KOG0793 | 1004 | consensus Protein tyrosine phosphatase [Signal tra | 96.01 | |
| PF01653 | 315 | DNA_ligase_aden: NAD-dependent DNA ligase adenylat | 94.41 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 94.36 | |
| PF04179 | 451 | Init_tRNA_PT: Initiator tRNA phosphoribosyl transf | 94.32 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 93.67 | |
| PRK07956 | 665 | ligA NAD-dependent DNA ligase LigA; Validated | 92.85 | |
| cd00114 | 307 | LIGANc NAD+ dependent DNA ligase adenylation domai | 92.62 | |
| PF09414 | 186 | RNA_ligase: RNA ligase; InterPro: IPR021122 This e | 92.29 | |
| KOG3673 | 845 | consensus FtsJ-like RNA methyltransferase [RNA pro | 92.09 | |
| PRK14351 | 689 | ligA NAD-dependent DNA ligase LigA; Provisional | 91.21 | |
| TIGR00575 | 652 | dnlj DNA ligase, NAD-dependent. The member of this | 91.05 | |
| PRK14350 | 669 | ligA NAD-dependent DNA ligase LigA; Provisional | 90.95 | |
| PRK08097 | 562 | ligB NAD-dependent DNA ligase LigB; Reviewed | 90.83 | |
| smart00532 | 441 | LIGANc Ligase N family. | 90.52 | |
| PF05098 | 450 | LEF-4: Late expression factor 4 (LEF-4); InterPro: | 90.51 | |
| TIGR02307 | 325 | RNA_lig_RNL2 RNA ligase, Rnl2 family. Members of t | 89.1 | |
| PHA02142 | 366 | putative RNA ligase | 87.59 | |
| cd01518 | 101 | RHOD_YceA Member of the Rhodanese Homology Domain | 84.41 |
| >COG5226 CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-61 Score=477.35 Aligned_cols=307 Identities=34% Similarity=0.477 Sum_probs=253.8
Q ss_pred CCCCCccccccchhhhhhhcccceeeeecCceeEEEEEEECC------EEEEEeCCCccccccCcCCC-cCCc-cccccc
Q 006606 305 MQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITID------GCYLIDRCFNFRRVQMRFPC-RNSN-EGLGEK 376 (639)
Q Consensus 305 ~~FPGsqPVsl~r~~l~~l~~~~Y~V~eK~DG~R~ll~i~~~------~vyLidR~~~~~~v~~~FP~-~~~~-~~~~~~ 376 (639)
..|||||||||+.+|++.|..++|+||||+||+|+||+++.+ ++|++||+|+||.++-.||. .... +| +.
T Consensus 41 ~tFpGsqPVsf~~~~i~~Ll~~dy~VCEKsDGvR~Ll~vte~p~tg~~~~y~~DR~nnfY~v~~~f~p~~~~~k~g--e~ 118 (404)
T COG5226 41 ETFPGSQPVSFTLDNIGLLLNNDYLVCEKSDGVRALLLVTEEPVTGAFRGYFYDRRNNFYEVHTSFPPCSTVLKDG--EV 118 (404)
T ss_pred ccCCCCcceeeehhhHHHHHhCCeEEEEccCCeEEEEEEEecccCCCcceEEEeccCceEEeccccCCcccccccC--cE
Confidence 689999999999999999999999999999999999999853 69999999999988644543 3222 22 35
Q ss_pred CCCCeEeeEEEEEecCCCCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCCC
Q 006606 377 THHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEP 456 (639)
Q Consensus 377 ~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~p 456 (639)
.+.+|+||||+|.|..+.++-++++|++||||+++|.-++.++.++|++.|++++.+|+...+. ..+ .+....|
T Consensus 119 l~~dtlldgelV~d~~p~~k~~qlryl~fdcLa~~g~~~~~~~~s~Rl~~l~Ke~~kp~~~~r~-----s~~-~~~~~fp 192 (404)
T COG5226 119 LLEDTLLDGELVFDCLPYEKVPQLRYLLFDCLAYAGMFVERMEKSERLKTLQKEDEKPRERKRV-----SIE-IDSGSFP 192 (404)
T ss_pred EeccceecceEEEEeccccchHHHHHHHHHHhhhcceeEeecchhhHHHHhhhhhcccHhhhhh-----eee-ccccccc
Confidence 6899999999999988776546799999999999999999999999999999999999765442 111 2234679
Q ss_pred cEEEecceeechhHHHHHHHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecC-----------
Q 006606 457 FRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDD----------- 525 (639)
Q Consensus 457 f~I~~K~~~~~~~~~~l~~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKp~~~nTvDF~l~~~~~----------- 525 (639)
|.+.+|.|...+++-++++. ||.+.|++|||||||.+.||+.|++..+|||||.++|||||++.+...
T Consensus 193 f~~s~K~M~~syg~~ki~k~-ip~L~HgnDGLIFTp~~~PY~~Gkd~~lLKWKP~~~NTiDF~lvl~~~~~e~~Dyny~~ 271 (404)
T COG5226 193 FHFSVKQMLKSYGFWKIYKK-IPELKHGNDGLIFTPADEPYSVGKDGALLKWKPASLNTIDFRLVLHKKWSEVDDYNYVC 271 (404)
T ss_pred eeeeHHHHHhhhhHHHHHhh-cccccCCCCceEeccCCCCcccCccceeeecCccccCceeeeeeeccccccccCcceee
Confidence 99999999999999999964 799999999999999999999999999999999999999999977521
Q ss_pred -CceeEEEEeCCeee-eecCceeEecC-------CCCCCCCceEEEEEEeCCCCeeEEEEEeCCCCCCChHHHHHHHHHh
Q 006606 526 -DRQLLYVFERGKKK-LMEGSSVEFTD-------REPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRS 596 (639)
Q Consensus 526 -~~~~L~~~~~g~~~-~~~~~~~~f~~-------~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~S 596 (639)
....|+|+.+.+.. ++.... ..| ..-..+.++||||+.+. .|.|+++|+|+||.+|||++||.+|++|
T Consensus 272 ~p~f~l~Vw~gRk~yrfFa~~~--v~d~ew~~lk~~~~pl~~rivEc~l~~-e~~W~~lrfRdDK~~~NhisvV~~VLeS 348 (404)
T COG5226 272 SPKFGLDVWFGRKTYRFFASGE--VIDGEWCELKYDCDPLYWRIVECVLKK-EGAWKLLRFRDDKDTPNHISVVCNVLES 348 (404)
T ss_pred cccccccEEecccceeeeeeeE--echHHHHHHhhhcccchhhHHHHHhcc-CCceEEEEeecCCCCCchhhHHHHHHHH
Confidence 23467787754432 222211 112 33467899999999985 4599999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHhc------Cccchhhc
Q 006606 597 IRDNITEEVLLNEIQEIIR------LPMYADRI 623 (639)
Q Consensus 597 I~d~It~e~L~~~i~~i~~------~~~~~~~~ 623 (639)
|+|+||.|+|..+..-|+. .||...|.
T Consensus 349 i~D~vs~EdL~~~~~vire~~~~R~k~~~~~R~ 381 (404)
T COG5226 349 IRDNVSIEDLSTFYSVIRENSKRREKAMRRGRP 381 (404)
T ss_pred HhccCcHHHHHHHHHHHHHHHHhhhhccccCCC
Confidence 9999999999998877633 56665554
|
|
| >KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF01331 mRNA_cap_enzyme: mRNA capping enzyme, catalytic domain; InterPro: IPR001339 The mRNA capping enzyme in yeasts is composed of two separate chains, alpha a mRNA guanyltransferase and beta an RNA 5'-triphosphate | Back alignment and domain information |
|---|
| >cd07895 Adenylation_mRNA_capping Adenylation domain of GTP-dependent mRNA capping enzymes | Back alignment and domain information |
|---|
| >cd06846 Adenylation_DNA_ligase_like Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases | Back alignment and domain information |
|---|
| >KOG1719 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd07898 Adenylation_DNA_ligase Adenylation domain of ATP-dependent DNA Ligases | Back alignment and domain information |
|---|
| >PTZ00242 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >cd07903 Adenylation_DNA_ligase_IV Adenylation domain of DNA Ligase IV | Back alignment and domain information |
|---|
| >PTZ00393 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >cd07897 Adenylation_DNA_ligase_Bac1 Adenylation domain of putative bacterial ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >KOG1720 consensus Protein tyrosine phosphatase CDC14 [Defense mechanisms] | Back alignment and domain information |
|---|
| >cd07906 Adenylation_DNA_ligase_LigD_LigC Adenylation domain of Mycobacterium tuberculosis LigD and LigC-like ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >cd07901 Adenylation_DNA_ligase_Arch_LigB Adenylation domain of archaeal and bacterial LigB-like DNA ligases | Back alignment and domain information |
|---|
| >cd07900 Adenylation_DNA_ligase_I_Euk Adenylation domain of eukaryotic DNA Ligase I | Back alignment and domain information |
|---|
| >cd07905 Adenylation_DNA_ligase_LigC Adenylation domain of Mycobacterium tuberculosis LigC-like ATP-dependent DNA ligases | Back alignment and domain information |
|---|
| >PF03919 mRNA_cap_C: mRNA capping enzyme, C-terminal domain; InterPro: IPR013846 This domain is found at the C terminus of the mRNA capping enzyme | Back alignment and domain information |
|---|
| >cd08039 Adenylation_DNA_ligase_Fungal Adenylation domain of uncharacterized fungal ATP-dependent DNA ligase-like proteins | Back alignment and domain information |
|---|
| >PRK07636 ligB ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02779 NHEJ_ligase_lig DNA polymerase LigD, ligase domain | Back alignment and domain information |
|---|
| >PRK08224 ligC ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PRK09247 ATP-dependent DNA ligase; Validated | Back alignment and domain information |
|---|
| >cd07902 Adenylation_DNA_ligase_III Adenylation domain of DNA Ligase III | Back alignment and domain information |
|---|
| >PRK09633 ligD ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >TIGR00574 dnl1 DNA ligase I, ATP-dependent (dnl1) | Back alignment and domain information |
|---|
| >PHA02587 30 DNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd09232 Snurportin-1_C C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1 | Back alignment and domain information |
|---|
| >smart00195 DSPc Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PRK03180 ligB ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >PF01068 DNA_ligase_A_M: ATP dependent DNA ligase domain; InterPro: IPR012310 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalysing the formation of an internucleotide ester bond between phosphate and deoxyribose | Back alignment and domain information |
|---|
| >PLN03113 DNA ligase 1; Provisional | Back alignment and domain information |
|---|
| >PRK01109 ATP-dependent DNA ligase; Provisional | Back alignment and domain information |
|---|
| >PRK09632 ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >KOG1718 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK05972 ligD ATP-dependent DNA ligase; Reviewed | Back alignment and domain information |
|---|
| >COG1793 CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PHA00454 ATP-dependent DNA ligase | Back alignment and domain information |
|---|
| >cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >PRK09125 DNA ligase; Provisional | Back alignment and domain information |
|---|
| >cd07896 Adenylation_kDNA_ligase_like Adenylation domain of kDNA ligases and similar proteins | Back alignment and domain information |
|---|
| >KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1717 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK12361 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1716 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >TIGR02776 NHEJ_ligase_prk DNA ligase D | Back alignment and domain information |
|---|
| >KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
| >KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0967 consensus ATP-dependent DNA ligase I [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species | Back alignment and domain information |
|---|
| >PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >cd07894 Adenylation_RNA_ligase Adenylation domain of RNA circularization proteins | Back alignment and domain information |
|---|
| >smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity | Back alignment and domain information |
|---|
| >smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif | Back alignment and domain information |
|---|
| >TIGR01244 conserved hypothetical protein TIGR01244 | Back alignment and domain information |
|---|
| >cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways | Back alignment and domain information |
|---|
| >PRK15375 pathogenicity island 1 effector protein StpP; Provisional | Back alignment and domain information |
|---|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
| >smart00194 PTPc Protein tyrosine phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B | Back alignment and domain information |
|---|
| >PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function | Back alignment and domain information |
|---|
| >PHA02740 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B | Back alignment and domain information |
|---|
| >PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PHA02742 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02747 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02746 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG1572 consensus Predicted protein tyrosine phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG3132 consensus m3G-cap-specific nuclear import receptor (Snurportin1) [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0790 consensus Protein tyrosine phosphatase Corkscrew and related SH2 domain enzymes [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PHA02738 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0792 consensus Protein tyrosine phosphatase PTPMEG, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3453 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01209 RNA ligase, Pab1020 family | Back alignment and domain information |
|---|
| >KOG0791 consensus Protein tyrosine phosphatase, contains fn3 domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5350 Predicted protein tyrosine phosphatase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0789 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1423 ATP-dependent DNA ligase, homolog of eukaryotic ligase III [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF14671 DSPn: Dual specificity protein phosphatase, N-terminal half; PDB: 1OHD_A 1OHE_A 1OHC_A | Back alignment and domain information |
|---|
| >KOG0793 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF01653 DNA_ligase_aden: NAD-dependent DNA ligase adenylation domain; InterPro: IPR013839 DNA ligase (polydeoxyribonucleotide synthase) is the enzyme that joins two DNA fragments by catalyzing the formation of an internucleotide ester bond between phosphate and deoxyribose | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04179 Init_tRNA_PT: Initiator tRNA phosphoribosyl transferase ; InterPro: IPR007306 This enzyme (2 | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK07956 ligA NAD-dependent DNA ligase LigA; Validated | Back alignment and domain information |
|---|
| >cd00114 LIGANc NAD+ dependent DNA ligase adenylation domain | Back alignment and domain information |
|---|
| >PF09414 RNA_ligase: RNA ligase; InterPro: IPR021122 This entry represents the RNA ligase domain | Back alignment and domain information |
|---|
| >KOG3673 consensus FtsJ-like RNA methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >TIGR00575 dnlj DNA ligase, NAD-dependent | Back alignment and domain information |
|---|
| >PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional | Back alignment and domain information |
|---|
| >PRK08097 ligB NAD-dependent DNA ligase LigB; Reviewed | Back alignment and domain information |
|---|
| >smart00532 LIGANc Ligase N family | Back alignment and domain information |
|---|
| >PF05098 LEF-4: Late expression factor 4 (LEF-4); InterPro: IPR007790 The baculovirus Autographa californica nuclear polyhedrosis virus (AcMNPV) virus encodes a DNA-dependent RNA polymerase that is required for transcription of viral late genes | Back alignment and domain information |
|---|
| >TIGR02307 RNA_lig_RNL2 RNA ligase, Rnl2 family | Back alignment and domain information |
|---|
| >PHA02142 putative RNA ligase | Back alignment and domain information |
|---|
| >cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 639 | ||||
| 3s24_A | 347 | Crystal Structure Of Human Mrna Guanylyltransferase | 1e-38 | ||
| 3rtx_A | 343 | Crystal Structure Of Mammalian Capping Enzyme (Mce1 | 2e-38 | ||
| 2c46_A | 241 | Crystal Structure Of The Human Rna Guanylyltransfer | 9e-37 | ||
| 1i9s_A | 210 | Crystal Structure Of The Rna Triphosphatase Domain | 4e-36 | ||
| 1i9t_A | 210 | Crystal Structure Of The Oxidized Rna Triphosphatas | 7e-35 | ||
| 3kyh_C | 461 | Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatu | 4e-28 | ||
| 1p16_A | 395 | Structure Of An Mrna Capping Enzyme Bound To The Ph | 2e-27 | ||
| 1ckm_A | 330 | Structure Of Two Different Conformations Of Mrna Ca | 4e-15 | ||
| 1yn9_A | 169 | Crystal Structure Of Baculovirus Rna 5'-Phosphatase | 1e-14 | ||
| 1ckn_B | 330 | Structure Of Guanylylated Mrna Capping Enzyme Compl | 2e-14 | ||
| 2i6i_A | 161 | Crystal Structures Of The Archaeal Sulfolobus Ptp-F | 3e-04 | ||
| 3rgo_A | 157 | Crystal Structure Of Ptpmt1 Length = 157 | 6e-04 |
| >pdb|3S24|A Chain A, Crystal Structure Of Human Mrna Guanylyltransferase Length = 347 | Back alignment and structure |
|
| >pdb|3RTX|A Chain A, Crystal Structure Of Mammalian Capping Enzyme (Mce1) And Pol Ii Ctd Complex Length = 343 | Back alignment and structure |
| >pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And 5'-Phosphatase Length = 241 | Back alignment and structure |
| >pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of Mouse Mrna Capping Enzyme Length = 210 | Back alignment and structure |
| >pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase Domain Of Mouse Mrna Capping Enzyme Length = 210 | Back alignment and structure |
| >pdb|3KYH|C Chain C, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus Length = 461 | Back alignment and structure |
| >pdb|1P16|A Chain A, Structure Of An Mrna Capping Enzyme Bound To The Phosphorylated Carboxyl-Terminal Domain Of Rna Polymerase Ii Length = 395 | Back alignment and structure |
| >pdb|1CKM|A Chain A, Structure Of Two Different Conformations Of Mrna Capping Enzyme In Complex With Gtp Length = 330 | Back alignment and structure |
| >pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase Complexed With Phosphate Length = 169 | Back alignment and structure |
| >pdb|1CKN|B Chain B, Structure Of Guanylylated Mrna Capping Enzyme Complexed With Gtp Length = 330 | Back alignment and structure |
| >pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold Phosphatase Length = 161 | Back alignment and structure |
| >pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1 Length = 157 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A Length = 241 | Back alignment and structure |
|---|
Score = 221 bits (564), Expect = 3e-68
Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 5/239 (2%)
Query: 62 HAYQPAMHDQYYQNKNYKSYDRNKLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPP 121
H + + D +N ++S NK+PP WL+CP GQ + G +P K L ++ +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMAHNKIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAE 63
Query: 122 GKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNA 181
R+ + + L+ L K+GL++DLTNT+R+Y +D++KEGIK++K+QCKG P
Sbjct: 64 ENRFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTE 123
Query: 182 SVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEV 241
+ F+ +F R + I VHCTHG NRTG++I FL+ S+ A+ FA+
Sbjct: 124 NTETFIRLCERFNERNPP--ELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQA 181
Query: 242 RPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE--LDLNGEAVPDDDDDGVPAAA 298
RPPGIYK +Y++ L+ Y + ++ P P P+W E D + + + + +A+
Sbjct: 182 RPPGIYKGDYLKELFRRYGDIE-EAPPPPLLPDWCFEDDEDEDEDEDGKKESETGSSAS 239
|
| >1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3 Length = 395 | Back alignment and structure |
|---|
| >1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B* Length = 330 | Back alignment and structure |
|---|
| >3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A Length = 343 | Back alignment and structure |
|---|
| >3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae} Length = 461 | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} Length = 169 | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Length = 348 | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} Length = 167 | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Length = 157 | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* Length = 161 | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Length = 159 | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Length = 212 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A Length = 189 | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A Length = 339 | Back alignment and structure |
|---|
| >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} Length = 149 | Back alignment and structure |
|---|
| >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Length = 294 | Back alignment and structure |
|---|
| >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} Length = 145 | Back alignment and structure |
|---|
| >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
| >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} Length = 190 | Back alignment and structure |
|---|
| >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A Length = 144 | Back alignment and structure |
|---|
| >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A Length = 176 | Back alignment and structure |
|---|
| >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} Length = 161 | Back alignment and structure |
|---|
| >3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} Length = 144 | Back alignment and structure |
|---|
| >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Length = 188 | Back alignment and structure |
|---|
| >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} Length = 177 | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Length = 324 | Back alignment and structure |
|---|
| >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} Length = 164 | Back alignment and structure |
|---|
| >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} Length = 165 | Back alignment and structure |
|---|
| >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} Length = 160 | Back alignment and structure |
|---|
| >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A Length = 155 | Back alignment and structure |
|---|
| >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Length = 154 | Back alignment and structure |
|---|
| >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} Length = 195 | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} Length = 361 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 639 | |||
| 3rtx_A | 343 | MRNA-capping enzyme; guanylyltransferase, RNA poly | 100.0 | |
| 3kyh_C | 461 | MRNA-capping enzyme subunit alpha; 5' modification | 100.0 | |
| 1p16_A | 395 | GTP--RNA, mRNA capping enzyme alpha subunit; guany | 100.0 | |
| 1ckm_A | 330 | MRNA capping enzyme; nucleotidyltransferase; HET: | 100.0 | |
| 2c46_A | 241 | MRNA capping enzyme; phosphatase, transferase, hyd | 100.0 | |
| 1yn9_A | 169 | BVP, polynucleotide 5'-phosphatase; RNA triphospha | 100.0 | |
| 2cfm_A | 561 | Thermostable DNA ligase; protein-nucleotide comple | 99.91 | |
| 2hiv_A | 621 | Thermostable DNA ligase; ATP-dependent, open confo | 99.9 | |
| 1vs0_A | 310 | Putative DNA ligase-like protein RV0938/MT0965; OB | 99.9 | |
| 1x9n_A | 688 | DNA ligase I; 5'-adenylated nicked DNA, protein-DN | 99.9 | |
| 3gde_A | 558 | DNA ligase; DNA-binding domain, adenylation domain | 99.87 | |
| 1fvi_A | 297 | Chlorella virus DNA ligase-adenylate; adenylated D | 99.87 | |
| 3l2p_A | 579 | DNA ligase 3; DNA ligase, DNA repair, ATP-binding, | 99.85 | |
| 2oud_A | 177 | Dual specificity protein phosphatase 10; A central | 99.84 | |
| 3rgo_A | 157 | Protein-tyrosine phosphatase mitochondrial 1; phos | 99.83 | |
| 1a0i_A | 348 | DNA ligase; DNA replication; HET: DNA ATP; 2.60A { | 99.83 | |
| 3emu_A | 161 | Leucine rich repeat and phosphatase domain contain | 99.83 | |
| 3ezz_A | 144 | Dual specificity protein phosphatase 4; alpha/beta | 99.82 | |
| 3s4e_A | 144 | Dual specificity protein phosphatase 19; PTP, prot | 99.82 | |
| 3s4o_A | 167 | Protein tyrosine phosphatase-like protein; structu | 99.82 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 99.82 | |
| 2hxp_A | 155 | Dual specificity protein phosphatase 9; human phos | 99.82 | |
| 2nt2_A | 145 | Protein phosphatase slingshot homolog 2; alpha/bet | 99.82 | |
| 1zzw_A | 149 | Dual specificity protein phosphatase 10; MKP, PTP, | 99.82 | |
| 1rxd_A | 159 | Protein tyrosine phosphatase type IVA, member 1; p | 99.81 | |
| 3rz2_A | 189 | Protein tyrosine phosphatase type IVA 1; tyrosine | 99.81 | |
| 2e0t_A | 151 | Dual specificity phosphatase 26; conserved hypothe | 99.8 | |
| 2j16_A | 182 | SDP-1, tyrosine-protein phosphatase YIL113W; hydro | 99.8 | |
| 3f81_A | 183 | Dual specificity protein phosphatase 3; hydrolase, | 99.8 | |
| 4erc_A | 150 | Dual specificity protein phosphatase 23; alpha bet | 99.8 | |
| 2hcm_A | 164 | Dual specificity protein phosphatase; structural g | 99.8 | |
| 2img_A | 151 | Dual specificity protein phosphatase 23; DUSP23, V | 99.79 | |
| 2esb_A | 188 | Dual specificity protein phosphatase 18; alpha/bet | 99.79 | |
| 2g6z_A | 211 | Dual specificity protein phosphatase 5; alpha/beta | 99.78 | |
| 2r0b_A | 154 | Serine/threonine/tyrosine-interacting protein; str | 99.78 | |
| 3v0d_A | 339 | Voltage-sensor containing phosphatase; PTP, hydrol | 99.78 | |
| 1wrm_A | 165 | Dual specificity phosphatase 22; DSP, JNK, hydrola | 99.78 | |
| 3n0a_A | 361 | Tyrosine-protein phosphatase auxilin; phosphatase- | 99.77 | |
| 2y96_A | 219 | Dual specificity phosphatase DUPD1; hydrolase; 2.3 | 99.77 | |
| 1yz4_A | 160 | DUSP15, dual specificity phosphatase-like 15 isofo | 99.77 | |
| 2wgp_A | 190 | Dual specificity protein phosphatase 14; MKP6, DUS | 99.76 | |
| 2pq5_A | 205 | Dual specificity protein phosphatase 13; hydrolase | 99.76 | |
| 3cm3_A | 176 | Late protein H1, dual specificity protein phosphat | 99.76 | |
| 1d5r_A | 324 | Phosphoinositide phosphotase PTEN; C2 domain, phos | 99.74 | |
| 1fpz_A | 212 | Cyclin-dependent kinase inhibitor 3; alpha-beta sa | 99.72 | |
| 2q05_A | 195 | Late protein H1, dual specificity protein phosphat | 99.72 | |
| 2i6j_A | 161 | Ssoptp, sulfolobus solfataricus protein tyrosine p | 99.69 | |
| 3vnn_A | 139 | DNA ligase 4; non-homologous END joining, DNA repa | 99.69 | |
| 3nme_A | 294 | Ptpkis1 protein, SEX4 glucan phosphatase; dual spe | 99.64 | |
| 1xri_A | 151 | AT1G05000; structural genomics, protein structure | 99.52 | |
| 2f46_A | 156 | Hypothetical protein; structural genomics, joint c | 99.17 | |
| 3mmj_A | 314 | MYO-inositol hexaphosphate phosphohydrolase; phyta | 99.15 | |
| 1fpr_A | 284 | Protein-tyrosine phosphatase 1C; protein tyrosine | 99.08 | |
| 1p15_A | 253 | Protein-tyrosine phosphatase alpha; transmembrane, | 99.04 | |
| 2hc1_A | 291 | Receptor-type tyrosine-protein phosphatase beta; p | 99.02 | |
| 3b7o_A | 316 | Tyrosine-protein phosphatase non-receptor type 11; | 99.01 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.99 | |
| 1jln_A | 297 | STEP-like ptpase, protein tyrosine phosphatase, re | 98.99 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 98.97 | |
| 2b49_A | 287 | Protein tyrosine phosphatase, non-receptor type 3; | 98.97 | |
| 2cjz_A | 305 | Human protein tyrosine phosphatase PTPN5; protein | 98.96 | |
| 4grz_A | 288 | Tyrosine-protein phosphatase non-receptor type 6; | 98.95 | |
| 2ooq_A | 286 | Receptor-type tyrosine-protein phosphatase T; prot | 98.95 | |
| 2gjt_A | 295 | Receptor-type tyrosine-protein phosphatase PTPro; | 98.94 | |
| 2i75_A | 320 | Tyrosine-protein phosphatase non-receptor type 4; | 98.92 | |
| 2p6x_A | 309 | Tyrosine-protein phosphatase non-receptor type 22; | 98.91 | |
| 2bzl_A | 325 | Tyrosine-protein phosphatase, non-receptor type 14 | 98.9 | |
| 1zc0_A | 309 | Tyrosine-protein phosphatase, non-receptor type 7; | 98.9 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 98.88 | |
| 1yfo_A | 302 | D1, receptor protein tyrosine phosphatase alpha; h | 98.86 | |
| 1g4w_R | 383 | Protein tyrosine phosphatase SPTP; virulence facto | 98.84 | |
| 3i36_A | 342 | Vascular protein tyrosine phosphatase 1; PTP, hydr | 98.84 | |
| 3qwu_A | 370 | DNA ligase; structural genomics, PSI-2, midwest ce | 98.83 | |
| 2cm2_A | 304 | Tyrosine-protein phosphatase non-receptor type 1; | 98.79 | |
| 2h4v_A | 320 | Receptor-type tyrosine-protein phosphatase gamma; | 98.78 | |
| 2oc3_A | 303 | Tyrosine-protein phosphatase non-receptor type 18; | 98.73 | |
| 3s3e_A | 307 | Tyrosine-protein phosphatase 10D; differentiation, | 98.72 | |
| 2b3o_A | 532 | Tyrosine-protein phosphatase, non-receptor type 6; | 98.71 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 98.71 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 98.7 | |
| 1wch_A | 315 | Protein tyrosine phosphatase, non-receptor type 13 | 98.7 | |
| 4az1_A | 302 | Tyrosine specific protein phosphatase; hydrolase, | 98.69 | |
| 1xk5_A | 204 | Snurportin-1; protein-RNA-complex, transport prote | 98.66 | |
| 1l8k_A | 314 | T-cell protein-tyrosine phosphatase; hydrolase; 2. | 98.66 | |
| 2i1y_A | 301 | Receptor-type tyrosine-protein phosphatase; recept | 98.65 | |
| 2shp_A | 525 | SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin | 98.65 | |
| 3m4u_A | 306 | Tyrosine specific protein phosphatase, putative; p | 98.62 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 98.61 | |
| 3ps5_A | 595 | Tyrosine-protein phosphatase non-receptor type 6; | 98.61 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 98.59 | |
| 2vug_A | 389 | PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transfe | 98.58 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 98.57 | |
| 1ywf_A | 296 | Phosphotyrosine protein phosphatase PTPB; four str | 98.54 | |
| 3gjx_B | 365 | Snurportin-1; transport, cytoplasm, nucleus, RNA-b | 98.51 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 98.5 | |
| 4i8n_A | 354 | Tyrosine-protein phosphatase non-receptor type 1; | 98.46 | |
| 1lyv_A | 306 | Protein-tyrosine phosphatase YOPH; toxin, hydrolas | 98.42 | |
| 4ge6_A | 314 | Tyrosine-protein phosphatase non-receptor type 9; | 98.37 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 98.34 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 98.05 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 96.91 | |
| 1s68_A | 249 | RNA ligase 2; ribonucleic acid ligase, RNA repair; | 96.26 | |
| 2hvq_A | 335 | ORF1, hypothetical 37.6 kDa protein in GP24-HOC in | 96.1 | |
| 1ta8_A | 332 | DNA ligase, NAD-dependent; nucleotidyl transferase | 95.36 | |
| 1b04_A | 318 | Protein (DNA ligase); DNA replication; 2.80A {Geob | 94.82 | |
| 4glw_A | 305 | DNA ligase; inhibitor, ligase-ligase inhibitor com | 93.11 | |
| 4glx_A | 586 | DNA ligase; inhibitor, ligase-ligase inhibitor-DNA | 92.97 | |
| 3jsl_A | 318 | DNA ligase; NAD+-dependent, DNA damage, DNA repair | 92.71 | |
| 3uq8_A | 322 | DNA ligase; adenylated protein, ATP-grAsp, rossman | 90.87 | |
| 1zau_A | 328 | DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacteriu | 86.15 | |
| 1xdn_A | 277 | RNA editing ligase MP52; HET: MSE ATP; 1.20A {Tryp | 85.93 | |
| 2owo_A | 671 | DNA ligase; protein-DNA complex, ligase-DNA comple | 84.1 | |
| 1vee_A | 134 | Proline-rich protein family; hypothetical protein, | 83.97 |
| >3rtx_A MRNA-capping enzyme; guanylyltransferase, RNA polymerase II CTD, lysyl-N-GMP, NUC mRNA capping, transferase; HET: SEP GUN; 2.81A {Mus musculus} PDB: 3s24_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-67 Score=557.49 Aligned_cols=297 Identities=40% Similarity=0.655 Sum_probs=198.9
Q ss_pred cccCCCCCCCCCccccccchhhhhhhcccceeeeecCceeEEEEEEE-CCEEEEEeCCCccccc-cCcCCCcCCcccccc
Q 006606 298 ALHGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT-IDGCYLIDRCFNFRRV-QMRFPCRNSNEGLGE 375 (639)
Q Consensus 298 ~~~~~~~~~FPGsqPVsl~r~~l~~l~~~~Y~V~eK~DG~R~ll~i~-~~~vyLidR~~~~~~v-~~~FP~~~~~~~~~~ 375 (639)
.+++|++.+|||||||||+|+||+.|.+.+|+|||||||+|+||++. ++++||+||++.++.+ +.+||+..+..
T Consensus 35 ~~~~~~~~~FPGsqPVS~~r~nl~~L~~~~y~v~~K~DG~R~ll~i~~~~~v~L~sR~~~~~~~~~~~FP~~~~~~---- 110 (343)
T 3rtx_A 35 QFCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRKDLR---- 110 (343)
T ss_dssp HHTTCCSSSCCSEEEEECCTTGGGHHHHSCEEEEEECCCEEEEEEECSTTCEEEECTTCCEEEETTCCCEETTEEE----
T ss_pred HHhCCCCCCCCCceeeccchhhHHhhccCCEEEEECCCceEEEEEEEcCCEEEEEeCCCCeEEeccccCCcchhhh----
Confidence 47799999999999999999999999999999999999999999999 7899999999997655 58999775431
Q ss_pred cCCCCeEeeEEEEEecCCCCCCceeEEEEeEeeecCCeeccCCCHHHHHHHHHHHhcCccccccccccccCCCCccCCCC
Q 006606 376 KTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLE 455 (639)
Q Consensus 376 ~~~~~tlLDGElV~d~~~~~~~~~~~yliFDiL~~~G~~l~~~pf~eR~~~L~~~i~~p~~~~~~~~~~~~~p~~~~~~~ 455 (639)
..+.+||||||||+++..+. ..++|++||+|+++|++++++||.+|+++|++.|+.|+...++ ++.+..+.+
T Consensus 111 ~~~~~tvLDGElV~~~~~g~--~~~~~~~FDlL~~~G~dl~~~pl~eR~~~L~~~i~~p~~~~~~------~~~~~~~~~ 182 (343)
T 3rtx_A 111 MHLSNTLLDGEMIIDKVNGQ--AVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMK------TGLIDKTQE 182 (343)
T ss_dssp EECCSEEEEEEEEEEESSSS--EEEEEEEEEEEEBTTBCGGGSCHHHHHHHHHHHTHHHHHHHHH------HSSCCTTTS
T ss_pred ccCCCeEEEEEEEEecCCCc--EeeEEEEEEEEeECCcCcccCCHHHHHHHHHHHhhhHHHHHhh------cccccccCC
Confidence 23688999999999875432 4689999999999999999999999999999999988865431 122345678
Q ss_pred CcEEEecceeechhHHHHH-HHhcccccCCCceEEEEeCCCCCccCCCCCeEEEecCCCceEEEEEEEecCC-c------
Q 006606 456 PFRVRRKDFWLLSTVNKLL-KEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDD-R------ 527 (639)
Q Consensus 456 pf~I~~K~~~~~~~~~~l~-~~~~~~l~h~~DGLIf~p~~spY~~G~~~~llKWKp~~~nTvDF~l~~~~~~-~------ 527 (639)
||.|+.|+|++++.++++| .++++++.|++|||||||.+ ||.+|++..||||||+++|||||+|++.... .
T Consensus 183 pf~vr~K~~~~~~~~~~ll~~~~~~~l~~~~dGlIf~~~~-~Y~~G~~~~~lKwKp~~~~tvDF~l~~~~~~~~g~~~~~ 261 (343)
T 3rtx_A 183 PFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQPIG-KYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQN 261 (343)
T ss_dssp SSEEEECCCEEGGGHHHHSCC----------CEEEEEESS-CCCCEEEEEEEEECCSTTCC-------------------
T ss_pred CcEEEEEEeEehhhHHHHHhhhhHhhcCCCCCeEEEEECc-cCcCCCCcceEEEecCcceEEEEEEEecccCCCCccccc
Confidence 9999999999999999998 46889999999999999999 9999999999999999999999999886431 1
Q ss_pred -eeEEEEeCCeeeeecCceeEecCCCCCCCCceEEEEEEeCCCCeeEEEEEeCCCCCCChHHHHHHHHHhcccCCCHHHH
Q 006606 528 -QLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVL 606 (639)
Q Consensus 528 -~~L~~~~~g~~~~~~~~~~~f~~~~~~~~dg~IvEc~~d~~~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~It~e~L 606 (639)
+.||+ +|...++.. +..+ +++.++||+||||+|| +|+|+|||+|+||++||+++||.+||+||.|+||+|+|
T Consensus 262 ~~~l~~--~g~~~~f~~--~~~t-~~l~~ld~~IvEC~~~--~~~W~~~R~R~DK~~pN~~~tv~~v~~SI~d~Vt~e~L 334 (343)
T 3rtx_A 262 VGLLYV--GGYERPFAQ--IKVT-KELKQYDNKIIECKFE--NNSWVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEML 334 (343)
T ss_dssp -----------------------------------------------------------CHHHHHHHHHHHHSCCCHHHH
T ss_pred cceEEE--CCeeeecce--eecc-ccchhcCCEEEEEEEE--CCEEEEEEEcCCCCCCchHHHHHHHHHHHHccCCHHHH
Confidence 12333 343333321 2122 4567899999999997 68999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 006606 607 LNEIQEII 614 (639)
Q Consensus 607 ~~~i~~i~ 614 (639)
+++|++..
T Consensus 335 ~~~i~~~~ 342 (343)
T 3rtx_A 335 FEFIDRCA 342 (343)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99998753
|
| >3kyh_C MRNA-capping enzyme subunit alpha; 5' modification, triphosphatase, guanylyltransferase, complex, hydrolase, mRNA processing, nucleus; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3 | Back alignment and structure |
|---|
| >1ckm_A MRNA capping enzyme; nucleotidyltransferase; HET: GTP; 2.50A {Paramecium bursaria chlorella virus 1} SCOP: b.40.4.6 d.142.2.3 PDB: 1ckn_A* 1cko_A* 1ckn_B* | Back alignment and structure |
|---|
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} | Back alignment and structure |
|---|
| >2cfm_A Thermostable DNA ligase; protein-nucleotide complex, cell cycle, cell division, DNA damage, DNA recombination, DNA repair, DNA replication; HET: AMP; 1.8A {Pyrococcus furiosus} PDB: 3rr5_A* | Back alignment and structure |
|---|
| >2hiv_A Thermostable DNA ligase; ATP-dependent, open conformation; 2.05A {Sulfolobus solfataricus} PDB: 2hix_A* | Back alignment and structure |
|---|
| >1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1x9n_A DNA ligase I; 5'-adenylated nicked DNA, protein-DNA complex, L complex; HET: DNA DOC AMP; 3.00A {Homo sapiens} SCOP: a.235.1.1 b.40.4.6 d.142.2.1 | Back alignment and structure |
|---|
| >3gde_A DNA ligase; DNA-binding domain, adenylation domain, OB-fold domain, ATP-binding, cell cycle, cell division, DNA damage, DNA recombination; HET: DNA; 2.30A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >1fvi_A Chlorella virus DNA ligase-adenylate; adenylated DNA ligase; HET: AMP; 2.00A {Chlorella virus} SCOP: b.40.4.6 d.142.2.1 PDB: 2q2t_A* 2q2u_A* 1p8l_A* | Back alignment and structure |
|---|
| >3l2p_A DNA ligase 3; DNA ligase, DNA repair, ATP-binding, cell cycle, cell divisi damage; HET: DNA AMP; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* | Back alignment and structure |
|---|
| >1a0i_A DNA ligase; DNA replication; HET: DNA ATP; 2.60A {Enterobacteria phage T7} SCOP: b.40.4.6 d.142.2.1 | Back alignment and structure |
|---|
| >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A | Back alignment and structure |
|---|
| >3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A | Back alignment and structure |
|---|
| >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A | Back alignment and structure |
|---|
| >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A* | Back alignment and structure |
|---|
| >4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A | Back alignment and structure |
|---|
| >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} | Back alignment and structure |
|---|
| >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A | Back alignment and structure |
|---|
| >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} | Back alignment and structure |
|---|
| >2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens} | Back alignment and structure |
|---|
| >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} | Back alignment and structure |
|---|
| >2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A | Back alignment and structure |
|---|
| >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* | Back alignment and structure |
|---|
| >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* | Back alignment and structure |
|---|
| >3vnn_A DNA ligase 4; non-homologous END joining, DNA repair, XRCC4; HET: DNA; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A | Back alignment and structure |
|---|
| >2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} | Back alignment and structure |
|---|
| >3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A | Back alignment and structure |
|---|
| >1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A | Back alignment and structure |
|---|
| >1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A | Back alignment and structure |
|---|
| >3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A* | Back alignment and structure |
|---|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
| >1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens} | Back alignment and structure |
|---|
| >2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A* | Back alignment and structure |
|---|
| >4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A* | Back alignment and structure |
|---|
| >2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A | Back alignment and structure |
|---|
| >2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A | Back alignment and structure |
|---|
| >2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
| >2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A* | Back alignment and structure |
|---|
| >2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S | Back alignment and structure |
|---|
| >3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A | Back alignment and structure |
|---|
| >3qwu_A DNA ligase; structural genomics, PSI-2, midwest center for structural GE MCSG; HET: DNA ADN; 2.35A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ... | Back alignment and structure |
|---|
| >2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A | Back alignment and structure |
|---|
| >2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A* | Back alignment and structure |
|---|
| >2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi} | Back alignment and structure |
|---|
| >1xk5_A Snurportin-1; protein-RNA-complex, transport protein; HET: TPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A | Back alignment and structure |
|---|
| >2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 | Back alignment and structure |
|---|
| >3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >2vug_A PAB1020; RNA, ligase, AMPPNP, nucleotidyl- transferase; HET: ANP; 2.9A {Pyrococcus abyssi GE5} | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* | Back alignment and structure |
|---|
| >3gjx_B Snurportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Homo sapiens} PDB: 3nby_B* 3nbz_B* 3nc0_B* 3gb8_B 2qna_B | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A | Back alignment and structure |
|---|
| >4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A* | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >1s68_A RNA ligase 2; ribonucleic acid ligase, RNA repair; HET: AMP; 1.90A {Enterobacteria phage T4} SCOP: d.142.2.4 | Back alignment and structure |
|---|
| >2hvq_A ORF1, hypothetical 37.6 kDa protein in GP24-HOC intergenic region; RNA, ligase, lysine adenylate; HET: APK; 2.40A {Enterobacteria phage T4} PDB: 2hvr_A* 2hvs_A* | Back alignment and structure |
|---|
| >1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A* | Back alignment and structure |
|---|
| >1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2 | Back alignment and structure |
|---|
| >4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A* | Back alignment and structure |
|---|
| >3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A* | Back alignment and structure |
|---|
| >1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1xdn_A RNA editing ligase MP52; HET: MSE ATP; 1.20A {Trypanosoma brucei} SCOP: d.142.2.4 | Back alignment and structure |
|---|
| >2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 639 | ||||
| d1i9sa_ | 194 | c.45.1.1 (A:) mRNA capping enzyme, triphosphatase | 6e-51 | |
| d1p16a2 | 245 | d.142.2.3 (A:1-245) mRNA capping enzyme alpha subu | 7e-42 | |
| d1ckma2 | 228 | d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA | 8e-34 | |
| d1ckma1 | 89 | b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA | 6e-20 | |
| d1p16a1 | 145 | b.40.4.6 (A:246-390) mRNA capping enzyme alpha sub | 7e-19 | |
| d1ohea2 | 182 | c.45.1.1 (A:199-380) Proline directed phosphatase | 2e-11 | |
| d1fpza_ | 176 | c.45.1.1 (A:) Kinase associated phosphatase (kap) | 1e-10 | |
| d1d5ra2 | 174 | c.45.1.1 (A:14-187) Phoshphoinositide phosphatase | 5e-10 | |
| d1rxda_ | 152 | c.45.1.1 (A:) Protein tyrosine phosphatase type IV | 6e-10 | |
| d1m3ga_ | 145 | c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien | 5e-07 | |
| d1mkpa_ | 144 | c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien | 3e-06 | |
| d1vhra_ | 178 | c.45.1.1 (A:) VH1-related dual-specificity phospha | 3e-05 | |
| d2pt0a1 | 313 | c.45.1.4 (A:34-346) Myo-inositol hexaphosphate pho | 0.003 |
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Dual specificity phosphatase-like domain: mRNA capping enzyme, triphosphatase domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 172 bits (437), Expect = 6e-51
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 3/196 (1%)
Query: 85 KLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLV 144
K+PP WL+CP GQ + G +P K L ++ + R+ + + L+ L K+ L+
Sbjct: 1 KIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLL 60
Query: 145 IDLTNTTRYYPTSDLKKEGIKHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYI 204
+DLTNT+R+Y +D++KEGIK++K+QCKG P + F+ +F ++ + I
Sbjct: 61 VDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFN--ERSPPELI 118
Query: 205 LVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRL 264
VHCTHG NRTG++I FL+ S+ A+ FA+ RPPGIYK +Y++ L+ Y +
Sbjct: 119 GVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIE- 177
Query: 265 DSTPCPSTPEWKRELD 280
++ P P P+W E +
Sbjct: 178 EAPPPPVLPDWCFEDE 193
|
| >d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} Length = 245 | Back information, alignment and structure |
|---|
| >d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} Length = 228 | Back information, alignment and structure |
|---|
| >d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]} Length = 89 | Back information, alignment and structure |
|---|
| >d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} Length = 145 | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} Length = 182 | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} Length = 152 | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} Length = 144 | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} Length = 178 | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} Length = 313 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 639 | |||
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 100.0 | |
| d1p16a2 | 245 | mRNA capping enzyme alpha subunit {Yeast (Candida | 100.0 | |
| d1ckma2 | 228 | RNA guanylyltransferase (mRNA capping enzyme), N-t | 100.0 | |
| d1ohea2 | 182 | Proline directed phosphatase CDC14b2 {Human (Homo | 99.89 | |
| d1x9na3 | 220 | DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: | 99.88 | |
| d1rxda_ | 152 | Protein tyrosine phosphatase type IVa {Human (Homo | 99.86 | |
| d1mkpa_ | 144 | Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp | 99.81 | |
| d1vhra_ | 178 | VH1-related dual-specificity phosphatase, VHR {Hum | 99.8 | |
| d1d5ra2 | 174 | Phoshphoinositide phosphatase Pten (Pten tumor sup | 99.79 | |
| d1p16a1 | 145 | mRNA capping enzyme alpha subunit {Yeast (Candida | 99.78 | |
| d1ckma1 | 89 | RNA guanylyltransferase (mRNA capping enzyme) {Chl | 99.78 | |
| d1m3ga_ | 145 | Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax | 99.78 | |
| d1fpza_ | 176 | Kinase associated phosphatase (kap) {Human (Homo s | 99.78 | |
| d1a0ia2 | 239 | ATP-dependent DNA ligase, N-terminal domain {Bacte | 99.69 | |
| d1fvia2 | 188 | ATP-dependent DNA ligase, N-terminal domain {Chlor | 99.49 | |
| d1xria_ | 151 | Putative phosphatase At1g05000 {Thale cress (Arabi | 99.31 | |
| d2pt0a1 | 313 | Myo-inositol hexaphosphate phosphohydrolase (phyta | 98.89 | |
| d1g4us2 | 243 | SptP tyrosine phosphatase, catalytic domain {Salmo | 98.59 | |
| d1fpra_ | 284 | Tyrosine phosphatase {Human (Homo sapiens), shp-1 | 98.47 | |
| d1lara2 | 249 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 98.46 | |
| d1p15a_ | 245 | Protein-tyrosine phosphatase alpha {Mouse (Mus mus | 98.42 | |
| d1lara1 | 317 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 98.42 | |
| d1rpma_ | 278 | Tyrosine phosphatase {Human (Homo sapiens), mu [Ta | 98.39 | |
| d1s68a_ | 233 | RNA ligase 2, N-terminal domain {Bacteriophage T4 | 98.39 | |
| d1wcha_ | 308 | Tyrosine-protein phosphatase, non-receptor type 13 | 98.37 | |
| d2shpa1 | 307 | Tyrosine phosphatase {Human (Homo sapiens), shp-2 | 98.33 | |
| d1lyva_ | 283 | Protein-tyrosine phosphatase YopH, catalytic domai | 98.26 | |
| d1l8ka_ | 273 | Tyrosine phosphatase {Human (Homo sapiens), T-cell | 98.23 | |
| d1jlna_ | 297 | Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl | 98.23 | |
| d2f71a1 | 297 | Tyrosine phosphatase {Human (Homo sapiens), 1B [Ta | 98.22 | |
| d1yfoa_ | 288 | Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: | 98.11 | |
| d1ywfa1 | 272 | Phosphotyrosine protein phosphatase PtpB {Mycobact | 97.85 | |
| d1ohea1 | 157 | Proline directed phosphatase CDC14b2 {Human (Homo | 97.39 | |
| d1b04a_ | 312 | Adenylation domain of NAD+-dependent DNA ligase {B | 93.77 | |
| d1ta8a_ | 313 | Adenylation domain of NAD+-dependent DNA ligase {E | 92.76 | |
| d1dgsa3 | 314 | Adenylation domain of NAD+-dependent DNA ligase {T | 91.98 |
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: (Phosphotyrosine protein) phosphatases II superfamily: (Phosphotyrosine protein) phosphatases II family: Dual specificity phosphatase-like domain: mRNA capping enzyme, triphosphatase domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3e-41 Score=329.49 Aligned_cols=191 Identities=38% Similarity=0.763 Sum_probs=177.7
Q ss_pred CCCCCCccCCCCCCcccCceeecCCCCccccccCCCCCCCCCHHHHHHHHHHcCCCceEEEEcCCCCCCCCcchhhcCCc
Q 006606 85 KLPPGWLDCPPFGQEIGGCIIPSKVPLSEFFNDCIPPGKRYSFKQVIHQLRVLGRKLGLVIDLTNTTRYYPTSDLKKEGI 164 (639)
Q Consensus 85 ~~p~~W~~~~~~g~~I~~~fip~K~Pl~~~~~~~i~~~~~~~~~~l~~~~~~~~~~I~~VIdLt~~~~~y~~~~~~~~gI 164 (639)
+||.+|++||++|++|+++|||||+|+++.+.+.++.+.+|++.++++.++..+.++++|||||++.++|++++|+..||
T Consensus 1 klP~~W~~~~~~~~~I~~~fIa~k~Pl~~~~~~~i~~~~~~~~~~v~~~~~~~~~~~~~vinlt~~~~~Y~~~~~~~~gi 80 (194)
T d1i9sa_ 1 KIPPRWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKEGI 80 (194)
T ss_dssp CCCTTCTTSCSBCCCBTTTEEEECCCCCGGGTTTSCGGGCCCHHHHHHHHHHTTCCEEEEEECSSCSSSSCTHHHHTTTC
T ss_pred CCCchhhcCCCCCCEeCCCEEEecCCCCcCcccccCccccCCHHHHHHHHHhhCCCceEEEEccCCCCCcCHHHHHhcCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCCCCCCHHHHHHHHHHHHHHHHhcccCCCeEEEEcCCCCChhHHHHHHHHHHhcCCCHHHHHHHHHhcCCC
Q 006606 165 KHVKIQCKGRDAVPDNASVNNFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIVHFLMRSQSMSVAQAIKKFAEVRPP 244 (639)
Q Consensus 165 ~y~~ip~~d~~~~P~~~~i~~f~~~v~~fi~~~~~~~~~VlVHC~~G~~RTG~li~aYLm~~~g~s~~eAi~~~~~~Rp~ 244 (639)
.|+++|+.|.+.+|+.+.+..|++.+..|++ .++++.|+|||++|+||||+|||||||++.||++++|+++|+++||+
T Consensus 81 ~~~~~~~~~~~~~P~~~~~~~f~~~v~~~~~--~~~~~~V~VHC~~G~~Rsg~~i~ayL~~~~~~s~~~Ai~~~~~~Rp~ 158 (194)
T d1i9sa_ 81 KYIKLQCKGHGECPTTENTETFIRLCERFNE--RSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPP 158 (194)
T ss_dssp EEEECCCCCTTCCCCHHHHHHHHHHHTTC-------CCEEEEECSSSSHHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTT
T ss_pred eEEEecCCCCCCCCChHHHHHHHHHHHHHHH--hCCCCeEEEECCCCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHCCC
Confidence 9999999887679999999999999988887 45688999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHhhcCCCCCCCCCCCccccc
Q 006606 245 GIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKRE 278 (639)
Q Consensus 245 ~i~~~~~l~~L~~~y~~~~~~~~~~p~~P~W~~~ 278 (639)
++++++|+++|.++|.+... .+.+|+.|+|+++
T Consensus 159 ~i~~~~~~~~L~~~y~~~~~-~~~~~~~p~w~~~ 191 (194)
T d1i9sa_ 159 GIYKGDYLKELFRRYGDIEE-APPPPVLPDWCFE 191 (194)
T ss_dssp CCCCHHHHHHHHHHHSCGGG-CCCCCCCCGGGGT
T ss_pred CCCCHHHHHHHHHHHHhhcc-CCCCCCCCCccCC
Confidence 99999999999999998876 5779999999873
|
| >d1p16a2 d.142.2.3 (A:1-245) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1ckma2 d.142.2.3 (A:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x9na3 d.142.2.1 (A:534-753) DNA ligase I (LIG1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1ckma1 b.40.4.6 (A:239-327) RNA guanylyltransferase (mRNA capping enzyme) {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1a0ia2 d.142.2.1 (A:2-240) ATP-dependent DNA ligase, N-terminal domain {Bacteriophage T7 [TaxId: 10760]} | Back information, alignment and structure |
|---|
| >d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal domain {Chlorella virus PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} | Back information, alignment and structure |
|---|
| >d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1s68a_ d.142.2.4 (A:) RNA ligase 2, N-terminal domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]} | Back information, alignment and structure |
|---|
| >d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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| >d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1b04a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1ta8a_ d.142.2.2 (A:) Adenylation domain of NAD+-dependent DNA ligase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
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| >d1dgsa3 d.142.2.2 (A:1-314) Adenylation domain of NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]} | Back information, alignment and structure |
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