Citrus Sinensis ID: 006626

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------64
MLRRSILELSSRRRVPRQIIAQLPSIISARKEYSTASQKNVSPKPGPTGKPPESGSNFSPIIFGATVVVGVGLIAYQNGYLDQYIDIEKEKHSSLDSSKFRKDKNDVKDDHHVAEPVVFSHSDEEPKTSISAVEQAMQSVEPHKDIRQPEALSKTPVEDQPHLQDKVELTPQDQTVAVKEKDAAENSNKSIESREPSTSPPVSSEGSVEVESSESKSSKEKDENVQGTGILSQMSAASEKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSIA
cHHHHHHcccccccccHHHHHccccccccHHHHHcccccccccccccccccccccccccccHHcHHHHHHHHHHHHHHccccccHHHHHcccccccccHHHcccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcEEccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
ccHHHHHHcccccccccccccccccccccHHccccccccccccccccccccccccccHcHHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccEEccEEEEEEccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccHcccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MLRRSILelssrrrvpRQIIAQLPSIISARKEYstasqknvspkpgptgkppesgsnfspiiFGATVVVGVGLIAYQNGYLDQYIDIEkekhssldsskfrkdkndvkddhhvaepvvfshsdeepktSISAVEQAMQsvephkdirqpealsktpvedqphlqdkveltpqdqtvavkekdaaensnksiesrepstsppvssegsvevessesksskekdenvqgtgilsqmsaasekdeqkafpqqsiiiedksenelsnsaespaslldayhlrDKIDEGIDKATEDFINVMEELnngylskdGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSslpeetryhGTETLLQLNQKFDALkgtlrhfslippggggilTHSLAHIASWLKVHQvkeadqandgIESVICRVESYLREGKLAEAADALEegvrgsqaEEIVFDWVRRARNRAITEQGLTFLQSYATCLSIA
mlrrsilelssrrrvprqiiAQLPSIISARKEYStasqknvspkpgptgKPPESGSNFSPIIFGATVVVGVGLIAYQNGYLDQYIDIEKEkhssldsskfrkdkndvkddhhvaepvvfshsdeepKTSISAVEQAMQSVEPHKDIRQPEALSKTPVEDQphlqdkveltpqdqtvavkekdaaensnksiesrepstsppvssegsvevessesksskekdenvqgTGILSQMSAASEKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKekyekelrdsrarelmRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAAdaleegvrgsqaeeivFDWVRRARNRAITEQGLTFLQSYATCLSIA
MlrrsilelssrrrVPRQIIAQLPSIISARKEYSTASQKNVSPKPGPTGKPPESGSNFSPIIFGATVVVGVGLIAYQNGYLDQYIDIEKEKHSSLDSSKFRkdkndvkddhhvAEPVVFSHSDEEPKTSISAVEQAMQSVEPHKDIRQPEALSKTPVEDQPHLQDKVELTPQDQTVAVKEKDAAENSNKSIesrepstsppvssegsvevessesksskekdeNVQGTGILSQMSAASEKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTEEAAIlekelkrerakaaaTIKSlqekmeeklrmeleqkeNEAESKLKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKlalgalaledalSRGLPIQKEIDTLYTYLDGIEKdsvldlvlsslPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSIA
*********************************************************FSPIIFGATVVVGVGLIAYQNGYLDQYIDI****************************************************************************************************************************************************************************************LDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAA*********************************************************************************************AEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCL***
**************************************************************FGATVVVGVGLIAYQNGYLDQY******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************EEARKSYFAHKLALGALAL**************DTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLK************GIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSI*
MLRRSILELSSRRRVPRQIIAQLPSIISAR***********************SGSNFSPIIFGATVVVGVGLIAYQNGYLDQYIDIEKEKHSSLDSSKFRKDKNDVKDDHHVAEPVVF**********ISAVEQAMQSVEPHKDIRQPEA***********LQDKVELTPQDQTVAV************************************************GTGILSQM************PQQSIIIEDKS**********PASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRME***********LKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSIA
************RRV*****************************************NFSPIIFGATVVVGVGLIAYQNGYLDQYIDIEKEKHSSLDSSKFRKDKNDVKDDHHVAE*********************************************************************************************************************************************************ASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQV*****ANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSI*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLRRSILELSSRRRVPRQIIAQLPSIISARKEYSTASQKNVSPKPGPTGKPPESGSNFSPIIFGATVVVGVGLIAYQNGYLDQYIDIEKEKHSSLDSSKFRKDKNDVKDDHHVAEPVVFSHSDEEPKTSISAVEQAMQSVEPHKDIRQPEALSKTPVEDQPHLQDKVELTPQDQTVAVKEKDAAENSNKSIESREPSTSPPVSSEGSVEVESSESKSSKEKDENVQGTGILSQMSAASEKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFxxxxxxxxxxxxxxxxxxxxxELMRTEEAAILxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSIA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query638 2.2.26 [Sep-21-2011]
A2QI68631 Formation of crista junct yes no 0.432 0.437 0.263 9e-10
D4ANR0684 Formation of crista junct N/A no 0.501 0.467 0.242 3e-09
C4JHS3668 Formation of crista junct N/A no 0.391 0.374 0.241 4e-09
D4DHX2683 Formation of crista junct N/A no 0.384 0.358 0.251 1e-08
C5FGB1671 Formation of crista junct N/A no 0.380 0.362 0.249 2e-08
A1CHB5628 Formation of crista junct N/A no 0.432 0.439 0.25 4e-08
Q5B6I7618 Formation of crista junct yes no 0.465 0.480 0.247 4e-08
C5P436671 Formation of crista junct N/A no 0.391 0.372 0.230 6e-08
Q7SFD8672 Formation of crista junct N/A no 0.509 0.483 0.253 7e-08
D1Z5G1684 Formation of crista junct N/A no 0.554 0.517 0.227 1e-07
>sp|A2QI68|FCJ1_ASPNC Formation of crista junctions protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fcj1 PE=3 SV=1 Back     alignment and function desciption
 Score = 65.9 bits (159), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 28/304 (9%)

Query: 350 DSRAREL------MRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAE 403
           D  AREL      MR  +AA   +E + ER K       L    +EK+R EL++ +  AE
Sbjct: 339 DESARELIRRFDEMRAADAAQYREEFEAEREK-------LAHAYQEKIRTELQRAQEVAE 391

Query: 404 SKLKN-----ALELAKA---EIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARK 455
            +LKN     A+EL +    E+   + RE+  ++ K+ E   +++ L        E    
Sbjct: 392 QRLKNELVEQAIELNRKYLHEVKELVEREREGRLSKLNELTANVSELEKLTSGWREVIDS 451

Query: 456 SYFAHKLALGALALEDALSRGLPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGT 515
           +    +L +   A+   + R    +  +  L    +   +D V++  +SS+       G 
Sbjct: 452 NLRTQQLQVAVDAVRSVVDRSAVPRPFVRELVAVKELAAEDPVVEAAISSINPAAYQRGI 511

Query: 516 ETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESV 575
            +  Q+ ++F  +   +R  SL+P    GI +H+ + + S  KV   K+A   +D +ESV
Sbjct: 512 PSTSQIIERFRRVADEVRKASLLPE-DAGIASHAASVVLS--KVMFKKDAVAGSDDVESV 568

Query: 576 ICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYA--T 633
           + R ES L EG L  AA   E       A+ +  DW+   R     +Q L  +++ A   
Sbjct: 569 LYRTESLLEEGNLDAAAR--EMNSLSGWAKILSKDWLVDVRRVLEVKQALEVIETEARLQ 626

Query: 634 CLSI 637
           CL +
Sbjct: 627 CLRV 630
Multifunctional regulator of mitochondrial architecture and protein biogenesis. May act in concert with ATP synthase dimers to generate inner membrane structure and consequently normal mitochondrial morphology. Plays a role in keeping cristae membranes connected to the inner boundary membrane. Promotes protein import via the mitochondrial intermembrane space assembly (MIA) pathway.
Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)
>sp|D4ANR0|FCJ1_ARTBC Formation of crista junctions protein 1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=FCJ1 PE=3 SV=1 Back     alignment and function description
>sp|C4JHS3|FCJ1_UNCRE Formation of crista junctions protein 1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=FCJ1 PE=3 SV=1 Back     alignment and function description
>sp|D4DHX2|FCJ1_TRIVH Formation of crista junctions protein 1 OS=Trichophyton verrucosum (strain HKI 0517) GN=FCJ1 PE=3 SV=1 Back     alignment and function description
>sp|C5FGB1|FCJ1_ARTOC Formation of crista junctions protein 1 OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=FCJ1 PE=3 SV=1 Back     alignment and function description
>sp|A1CHB5|FCJ1_ASPCL Formation of crista junctions protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=fcj1 PE=3 SV=1 Back     alignment and function description
>sp|Q5B6I7|FCJ1_EMENI Formation of crista junctions protein 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fcj1 PE=3 SV=1 Back     alignment and function description
>sp|C5P436|FCJ1_COCP7 Formation of crista junctions protein 1 OS=Coccidioides posadasii (strain C735) GN=FCJ1 PE=3 SV=1 Back     alignment and function description
>sp|Q7SFD8|FCJ1_NEUCR Formation of crista junctions protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fcj1 PE=3 SV=1 Back     alignment and function description
>sp|D1Z5G1|FCJ1_SORMK Formation of crista junctions protein 1 OS=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) GN=FCJ1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query638
255576188638 conserved hypothetical protein [Ricinus 0.948 0.948 0.550 1e-179
296082466668 unnamed protein product [Vitis vinifera] 0.973 0.929 0.537 1e-163
224083763654 predicted protein [Populus trichocarpa] 0.949 0.926 0.530 1e-161
18420505650 uncharacterized protein [Arabidopsis tha 0.952 0.935 0.523 1e-158
224096233623 predicted protein [Populus trichocarpa] 0.916 0.939 0.539 1e-157
356511121642 PREDICTED: uncharacterized protein LOC10 0.962 0.956 0.512 1e-157
359480840671 PREDICTED: formation of crista junctions 0.948 0.901 0.514 1e-156
449451629658 PREDICTED: uncharacterized protein LOC10 0.971 0.942 0.495 1e-153
356528505646 PREDICTED: uncharacterized protein LOC10 0.971 0.959 0.496 1e-152
297797988657 hypothetical protein ARALYDRAFT_490751 [ 0.956 0.928 0.497 1e-146
>gi|255576188|ref|XP_002528988.1| conserved hypothetical protein [Ricinus communis] gi|223531578|gb|EEF33407.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 353/641 (55%), Positives = 464/641 (72%), Gaps = 36/641 (5%)

Query: 23  LPSIISARKEYSTASQKNVSPKPGPTGKPPESGSNFSPIIFGATVVVGVGLIAYQNGYLD 82
           +PS++S RKE+ST+ Q+N SPK G   KPPES SN   ++ G+ +V G GL+AYQ+GYLD
Sbjct: 6   IPSLLSLRKEFSTSPQQNASPKAGSGSKPPESKSNLPKVVAGSAIVGGAGLLAYQSGYLD 65

Query: 83  QYIDIEKEKHSSLDSSKFRKDKNDVKDDHHVAEPVVFSHSDEEPKTSISAVEQAMQSVEP 142
           QYI  +++     +S++   D  DVKD     E +  + S+E  K     VEQ  Q V+ 
Sbjct: 66  QYIGKQQQ-----NSARNGIDYKDVKDTQISGEQLASTISEESVKLG-HDVEQTAQKVQT 119

Query: 143 HKDIRQPEALSKTP-------VE---------DQPHLQ--DKVE----LTPQDQTVAVKE 180
             D+ Q E   K         VE         D PH+Q  ++VE    + P +    ++E
Sbjct: 120 EIDLPQFEVQQKVESKVYLPRVETEQKAETHGDLPHVQAEERVEPETDIRPHEAVRDIEE 179

Query: 181 K-DAAENSNKSIESRE-PSTSPPVSSEGSVEVESSESKSSKEKDENVQGTGILSQMSAAS 238
           K D   + + +++ ++    S    ++ S+ +E+SESK + E  E VQ   + +Q++  +
Sbjct: 180 KSDVVNDGSVAVQEKQRQEFSQSTKAKYSLGMENSESKITGETSEGVQVPEVTTQVTVVT 239

Query: 239 EKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLRDKIDE--GIDKATEDFINVM 296
           ++D  K  P Q +  ED S+  L N  E+ ASLL++YHL+D+ +E    +   E+ +  +
Sbjct: 240 DEDAIKVVPPQQLDTEDGSKAALGNITEA-ASLLESYHLKDRAEESTATEGPGEEALGPV 298

Query: 297 EELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRAREL 356
           EEL++G+++KDGK+V+ FLQAIHAAEQRQAELD  AFAEEKRALKEKYEKEL+D RAREL
Sbjct: 299 EELDDGFVTKDGKLVMSFLQAIHAAEQRQAELDAHAFAEEKRALKEKYEKELKDLRAREL 358

Query: 357 MRTEEAAILEKELKRERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAE 416
           M  EEAA+L+KE+KRERAKAAA I++LQEKMEEKLRMELEQKE+EAE+ +K   ELAKAE
Sbjct: 359 MHAEEAAMLDKEIKRERAKAAAAIRNLQEKMEEKLRMELEQKESEAEANMKRIQELAKAE 418

Query: 417 IAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRG 476
           + ++IA EK  QIEKMAEANL+INALCMAFYARSEEAR+ +  HKLALGALALEDALS+G
Sbjct: 419 LTSAIASEKAVQIEKMAEANLNINALCMAFYARSEEARQIHSVHKLALGALALEDALSKG 478

Query: 477 LPIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFS 536
           LPIQ+E+D L TY++G +KDS++ LVLS+LPEETRYHGT+TLLQLNQKF+ALKGTLRH+ 
Sbjct: 479 LPIQQELDALNTYMEGTDKDSLIHLVLSTLPEETRYHGTDTLLQLNQKFNALKGTLRHYI 538

Query: 537 LIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLREGKLAEAADALE 596
           LIPPGGGGIL+H++A +ASWL+    KE D + DGIESVI RVES+L EGKLAEAA+AL+
Sbjct: 539 LIPPGGGGILSHAMAQVASWLR---FKEVDPSGDGIESVIARVESFLAEGKLAEAANALQ 595

Query: 597 EGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSI 637
           EG+RGS+AEEI  DW+RRARNRAITEQ L+ LQSYA C+S+
Sbjct: 596 EGLRGSEAEEIAGDWMRRARNRAITEQALSVLQSYAACISL 636

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296082466|emb|CBI21471.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224083763|ref|XP_002307114.1| predicted protein [Populus trichocarpa] gi|222856563|gb|EEE94110.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18420505|ref|NP_568066.1| uncharacterized protein [Arabidopsis thaliana] gi|13605659|gb|AAK32823.1|AF361810_1 AT4g39690/T19P19_80 [Arabidopsis thaliana] gi|21700889|gb|AAM70568.1| AT4g39690/T19P19_80 [Arabidopsis thaliana] gi|23397147|gb|AAN31857.1| unknown protein [Arabidopsis thaliana] gi|332661705|gb|AEE87105.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224096233|ref|XP_002310585.1| predicted protein [Populus trichocarpa] gi|222853488|gb|EEE91035.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356511121|ref|XP_003524278.1| PREDICTED: uncharacterized protein LOC100807909, partial [Glycine max] Back     alignment and taxonomy information
>gi|359480840|ref|XP_002276780.2| PREDICTED: formation of crista junctions protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449451629|ref|XP_004143564.1| PREDICTED: uncharacterized protein LOC101212567 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356528505|ref|XP_003532843.1| PREDICTED: uncharacterized protein LOC100794530, partial [Glycine max] Back     alignment and taxonomy information
>gi|297797988|ref|XP_002866878.1| hypothetical protein ARALYDRAFT_490751 [Arabidopsis lyrata subsp. lyrata] gi|297312714|gb|EFH43137.1| hypothetical protein ARALYDRAFT_490751 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query638
TAIR|locus:2135267650 AT4G39690 "AT4G39690" [Arabido 0.942 0.924 0.437 4.1e-113
CGD|CAL0001186567 orf19.4396 [Candida albicans ( 0.545 0.613 0.204 4.4e-06
UNIPROTKB|Q5A044567 FCJ1 "Formation of crista junc 0.545 0.613 0.204 4.4e-06
ASPGD|ASPL0000011549618 AN3843 [Emericella nidulans (t 0.186 0.192 0.285 5.6e-06
UNIPROTKB|G4MWX2697 MGG_11278 "Mitochondrion prote 0.362 0.331 0.233 7.1e-06
ZFIN|ZDB-GENE-030131-5417757 immt "inner membrane protein, 0.202 0.170 0.235 0.00043
TAIR|locus:2135267 AT4G39690 "AT4G39690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
 Identities = 285/652 (43%), Positives = 354/652 (54%)

Query:    16 PRQIIAQLPSIISARKEYSTASQKNVSPKPGPTGKP-------------PESGSNFSPII 62
             PR + AQ   + S+R   ++ S KN  P   P GKP             P +  N S ++
Sbjct:    19 PRNLGAQRFHLSSSRN--ASTSGKNGLPGAKPVGKPDASKVDPPKVTPPPPTKGNSSKVV 76

Query:    63 FGATVVVGVGLIAYQNGYLDQYIDIEKEK-----HSSLDSSKFRXXXXXXXXXXXXAEPV 117
              G   + G  L+AYQ GYLDQY+  E++K     HS   + K                  
Sbjct:    77 IGGVAIAGAFLVAYQTGYLDQYLGKEQQKLSERIHSDALTEKLEEAHHLNVPSGVEDSTE 136

Query:   118 VFSHSDEEPKTSISAVEQAMQSVEPHKDIR-QPEALSKTPVEDQPHLQDKVELTPQDQTV 176
                  + +P+ + S   + +QS     DI  QPE  S    +   ++    E TPQ+  +
Sbjct:   137 KDGKVETQPQVTHSEASEGVQS-----DIELQPE--SDLSSDRFTYISSNQEETPQETVI 189

Query:   177 AVKEKDAAENSNKSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQGTGIL--SQM 234
                E +   ++++                                  N Q + +   S+ 
Sbjct:   190 DRAEINLPISASEDSGAKPDMPSEIISEAESVKLEAVPKPGDSPIIVNAQSSSVHRESET 249

Query:   235 SAASEKDEQKAFPQQSIIIEDKSENELSNSAESPASLLDAYHLR---------DKIDEGI 285
              +AS KD     P      ED  E E+    + P SLL  Y+L            I E I
Sbjct:   250 ESASPKD-----PAALKTPEDGIEREV----QLPGSLLKEYNLEGSDTESTGSSSIGEQI 300

Query:   286 DKATEDFINVMEELNNGYLSKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYE 345
              K TE F N  E L + Y+++DGK+VLDFL AIHAAE++QA LD + FAEE RALKEKYE
Sbjct:   301 TKETEAFPNSTEGLKDSYMTEDGKLVLDFLAAIHAAEKQQAHLDAQVFAEELRALKEKYE 360

Query:   346 KELRDSRARELMRTEEAAIXXXXXXXXXXXXXXTIKSXXXXXXXXXXXXXXXXXNEAESK 405
              ELRD RARELMR EEAAI               IK+                  EA+  
Sbjct:   361 NELRDLRARELMRIEEAAILDKELKRERTKAAAAIKAIQERMEDKLKAELEQKETEAQLA 420

Query:   406 LKNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKXXXX 465
             L  A ELAKAE+ ++IA+EK AQIEKMAEA+L+I AL MAFYARSEEAR+S+  HK    
Sbjct:   421 LSKAEELAKAEMISTIAKEKAAQIEKMAEADLNIKALSMAFYARSEEARQSHSVHKLALG 480

Query:   466 XXXXXXXXSRGLPIQKEIDTLYTYLDGIEKXXXXXXXXXXXPEETRYHGTETLLQLNQKF 525
                     S+GLP+QKEIDTL TYL+G  K           PEE R +GT+T+LQLNQKF
Sbjct:   481 ALALDDTLSKGLPVQKEIDTLQTYLEGTHKDSILGLVLSSLPEEARSNGTDTVLQLNQKF 540

Query:   526 DALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEADQANDGIESVICRVESYLRE 585
             D LKGTLRHFSLIPPGGGGIL HSLAH+AS LK    KE DQAN GIESVI +V++YL E
Sbjct:   541 DTLKGTLRHFSLIPPGGGGILAHSLAHVASSLKF---KEVDQANGGIESVIKKVDNYLAE 597

Query:   586 GKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYATCLSI 637
             GKLAEAA  LEEGV+GS+AEEIV DWVRRARNRAITEQ LT LQSYATC+S+
Sbjct:   598 GKLAEAAATLEEGVKGSKAEEIVSDWVRRARNRAITEQALTLLQSYATCVSL 649
GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0031305 "integral to mitochondrial inner membrane" evidence=IEA
GO:0006486 "protein glycosylation" evidence=RCA
CGD|CAL0001186 orf19.4396 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A044 FCJ1 "Formation of crista junctions protein 1" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000011549 AN3843 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4MWX2 MGG_11278 "Mitochondrion protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5417 immt "inner membrane protein, mitochondrial (mitofilin)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00050194
SubName- Full=Putative uncharacterized protein; (654 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query638
pfam09731493 pfam09731, Mitofilin, Mitochondrial inner membrane 7e-65
PLN02870533 PLN02870, PLN02870, Probable galacturonosyltransfe 7e-05
>gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein Back     alignment and domain information 
 Score =  221 bits (565), Expect = 7e-65
 Identities = 122/457 (26%), Positives = 195/457 (42%), Gaps = 30/457 (6%)

Query: 192 ESREPSTSPPVSSEGSVEVESSESKSSKEKDENVQGTGILSQMSAASEKDEQKAFPQQSI 251
           E       P +S   SV   S   K   ++ +  + +G+  +++ A  K    A    + 
Sbjct: 52  EEDPTLRDPQISVVSSVTKLSKGPKDEPKQVKIPRQSGLSEEVAEAEAKATSVAAEATTP 111

Query: 252 IIEDKSENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYL-SKDGKV 310
               +    L    E               D  + +    F ++++ +    L      +
Sbjct: 112 KSIQELVEALEELLEELLKETA-------SDPVVQELVSIFNDLIDSIKEDNLKDDLESL 164

Query: 311 VLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYEKELRDSRARELMRTEEAAILEKELK 370
           +    + +    ++ AEL      E +RALKEK E+ L       L R E         K
Sbjct: 165 IASAKEELDQLSKKLAELKAEEEEELERALKEKREELLSKLEEELLARLESK--EAALEK 222

Query: 371 RERAKAAATIKSLQEKMEEKLRMELEQKENEAESKLKNALELAKAE--------IAASIA 422
           + R +     + L++K EEKLR ELE++    E KLKN L L   E        I   + 
Sbjct: 223 QLRLEFEREKEELRKKYEEKLRQELERQAEAHEQKLKNELALQAIELQREFNKEIKEKVE 282

Query: 423 REKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRG-----L 477
            E+  ++ K+AE N  +  L  A  +RSE   +++   +L L   AL+ AL  G      
Sbjct: 283 EERNGRLAKLAELNSRLKGLEKALDSRSEAEDENHKVQQLWLAVEALKSALKSGSAGSPR 342

Query: 478 PIQKEIDTLYTYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSL 537
           P+ KE+D L       + D ++D  L+SLP E    G  +  QL  +F+ L   LR  SL
Sbjct: 343 PLVKELDALKEL---AKDDELVDAALASLPPEASQRGILSEEQLRNRFNLLAPELRKASL 399

Query: 538 IPPGGGGILTHSLAHIASWLKVHQVK-EADQANDGIESVICRVESYLREGKLAEAADALE 596
           +P    G+L H L+++ S L     + EAD   D +ESV+ R E  L  G L +AA  + 
Sbjct: 400 LPE-NAGLLGHLLSYLFSLLLFKPKQGEADPDGDDVESVLARAEYNLERGDLDKAAREV- 457

Query: 597 EGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYAT 633
             ++G  + ++  DW++ AR R   EQ L  L + A 
Sbjct: 458 NSLKG-WSRKLASDWLKEARRRLEVEQALDLLDAEAK 493

Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains. Length = 493
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 638
PF09731582 Mitofilin: Mitochondrial inner membrane protein; I 100.0
KOG1854657 consensus Mitochondrial inner membrane protein (mi 100.0
COG4223422 Uncharacterized protein conserved in bacteria [Fun 99.89
PF09731582 Mitofilin: Mitochondrial inner membrane protein; I 94.18
KOG1029 1118 consensus Endocytic adaptor protein intersectin [S 91.74
KOG0977546 consensus Nuclear envelope protein lamin, intermed 85.31
PRK06569155 F0F1 ATP synthase subunit B'; Validated 83.57
KOG2391365 consensus Vacuolar sorting protein/ubiquitin recep 80.99
>PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology Back     alignment and domain information 
Probab=100.00  E-value=4.7e-60  Score=520.17  Aligned_cols=353  Identities=30%  Similarity=0.439  Sum_probs=302.6

Q ss_pred             cchhhhhhccccccccCCCcchhhhhhhhhhhhcccc--cCCcHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHHHHHH
Q 006626          268 PASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYL--SKDGKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALKEKYE  345 (638)
Q Consensus       268 ~~~l~~~y~l~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~k~~~d~~~AI~aa~k~Qae~Da~~f~eel~~l~~kye  345 (638)
                      -+.+++.|+..+..+.....+..-.-+.+..++++.+  .+++.++..+...|+.-.+..++++.....+..+.|+++|+
T Consensus       208 ~~~i~~~~~~~~~~~~~~~el~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~i~~L~~~l~~l~~~~~~~l~~~L~~q~~  287 (582)
T PF09731_consen  208 LPKIVEEYKELVEEEPEVQELVSIFNDLIESINEGNLSESDLNSLIAHAKERIDALQKELAELKEEEEEELERALEEQRE  287 (582)
T ss_pred             hhhhhhhhhhhhhhhhhHHHHHHhccchhhhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4778889988776665552111111144556677888  78899999999999999999999999988999999999988


Q ss_pred             HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006626          346 KELRDSRARELMR-----TEEAAILEKELKRERAKAAATIKS--------LQEKMEEKLRMELEQKENEAESKLKNALEL  412 (638)
Q Consensus       346 keL~d~aA~el~~-----~~~~a~l~~efE~Er~kla~a~K~--------l~e~~EekLr~EL~~qe~E~e~rL~kl~el  412 (638)
                      ..+...+....++     ......|+.+|++++.++...|+.        ..+.++++|+++|..|.+|.++++.+    
T Consensus       288 e~~~~~~~~~~~~le~~~~~~~~~~~~e~~~~~~~l~~~~~~~L~~eL~~~~~~~~~~l~~~l~~~~~e~~~~~~~----  363 (582)
T PF09731_consen  288 ELLSKLREELEQELEEKRAELEEELREEFEREREELEEKYEEELRQELKRQEEAHEEHLKNELREQAIELQREFEK----  363 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence            6565544443332     134578999999999998777631        23446666666666666666666544    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCC-----CChHHHHHHHH
Q 006626          413 AKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKLALGALALEDALSRG-----LPIQKEIDTLY  487 (638)
Q Consensus       413 ~kaEi~~~VeqER~~rL~kL~EL~~~lqaL~~Av~arsE~~rqs~~vhkL~lAa~AL~~Al~~g-----~Pf~~EL~aLk  487 (638)
                         +|+++|++||.+|+++|++++.+|++|+.++..+++..+.++.+|+||+||.+|++++.+|     .||..||.+|+
T Consensus       364 ---~i~~~v~~Er~~~~~~l~~~~~~~~~le~~~~~~~~~~~~~~~~~~l~~a~~~l~~~l~~~~~~~~~p~~~el~~l~  440 (582)
T PF09731_consen  364 ---EIKEKVEQERNGRLAKLAELNSRLKALEEALDARSEAEDENRRAQQLWLAVDALKSALDSGNAGSPRPFEDELRALK  440 (582)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHH
Confidence               6799999999999999999999999999999999999999999999999999999999888     99999999999


Q ss_pred             HhhcCCCCchhHHHHHhcCchhhhhcCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHhhcceeeecccc--
Q 006626          488 TYLDGIEKDSVLDLVLSSLPEETRYHGTETLLQLNQKFDALKGTLRHFSLIPPGGGGILTHSLAHIASWLKVHQVKEA--  565 (638)
Q Consensus       488 ~la~gl~~D~LV~aaLsSLP~~Aae~GV~T~aqL~~RF~~Va~~iRraSLVPe~gaGll~hllS~l~S~Llf~p~K~G--  565 (638)
                      .++   ++|+||+++|++||+.+.++||+|..+|++||+.|++.||+++|||++++||++|++||++|+|+|++. .|  
T Consensus       441 ~~~---~~d~~v~~~l~~l~~~a~~~Gv~s~~~L~~rf~~v~~~~r~~~l~~~~~~g~~~~~~s~~~S~l~~~~~-~~~~  516 (582)
T PF09731_consen  441 ELA---PDDELVDAALSSLPPEAAQRGVPSEAQLRNRFERVAPEVRRASLVPPEGAGLLGHLLSYLFSLLLFRPK-GGEV  516 (582)
T ss_pred             HhC---CCChHHHHHHHhcCHHHhhCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHheeeeecC-CCCC
Confidence            998   589999999999999999999999999999999999999999999777789999999999999999543 23  


Q ss_pred             CCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHhcCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006626          566 DQANDGIESVICRVESYLREGKLAEAADALEEGVRGSQAEEIVFDWVRRARNRAITEQGLTFLQSYAT  633 (638)
Q Consensus       566 ~~~GdDveSILARAE~~L~~GDLd~AarELEn~L~G~~Ar~lA~DWL~dAR~RLEveQAl~vL~A~Aa  633 (638)
                      ++.|+|+++||+||++||.+|||+.|+++| |+|+|| |+.+|.|||++||+|||++|++++|.+||+
T Consensus       517 ~~~~~d~~~ilarae~~l~~gdL~~A~~~~-~~L~g~-~~~~a~dW~~~ar~~le~~q~~~~l~a~a~  582 (582)
T PF09731_consen  517 DPEGDDVESILARAEYYLERGDLDKAAREL-NQLKGW-ARKLAADWLKEARRRLEVEQALEVLEAHAA  582 (582)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHHH-HhCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            579999999999999999999999999999 799999 999999999999999999999999999985

Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex []. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence (residues 1-43) rich in positive-charged and hydroxylated residues and a membrane anchor domain (residues 47-66). In addition, it has three centrally located coiled coil domains (residues 200-240,280-310 and 400-420) []. ; GO: 0031305 integral to mitochondrial inner membrane
>KOG1854 consensus Mitochondrial inner membrane protein (mitofilin) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG4223 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology Back     alignment and domain information
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] Back     alignment and domain information
>PRK06569 F0F1 ATP synthase subunit B'; Validated Back     alignment and domain information
>KOG2391 consensus Vacuolar sorting protein/ubiquitin receptor VPS23 [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query638
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 5e-04
2zuo_A861 MVP, major vault protein; repeat domains, protein- 3e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 6e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 6e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 5e-04
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 63.7 bits (154), Expect = 1e-10
 Identities = 68/387 (17%), Positives = 128/387 (33%), Gaps = 105/387 (27%)

Query: 253 IEDK-----SENELSNSAESPASLLDAYHLRDKIDEGIDKATEDFINVMEELNNGYLSKD 307
           ++D      S+ E+ +   S  ++     L   +    ++  + F+  +  +N  Y    
Sbjct: 38  VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN--Y---- 91

Query: 308 GKVVLDFLQAIHAAEQRQAELDGRAFAEEKRALK---EKYEKELRDSRARELMRTEEAAI 364
                 FL +    EQRQ  +  R + E++  L    + + K    SR +  ++  +A  
Sbjct: 92  -----KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK-YNVSRLQPYLKLRQAL- 144

Query: 365 LEKELKRER----------AK---AAATIKS--LQEKMEEK---LRMELEQKENEAESKL 406
              EL+  +           K   A     S  +Q KM+ K   L +   +  N  E+ L
Sbjct: 145 --LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL---KNCNSPETVL 199

Query: 407 KNALELAKAEIAASIAREKVAQIEKMAEANLHINALCMAFYARSEEARKSYFAHKL---A 463
           +   +L        I     ++ +  +   L I+++        +   +     K     
Sbjct: 200 EMLQKL-----LYQIDPNWTSRSDHSSNIKLRIHSI--------QAELRRLLKSKPYENC 246

Query: 464 LGALALEDALSRGLPIQKEID-------TLYT--------YLDG-IEKDSVLDLVLSSL- 506
           L  L L +  +      K  +        L T        +L         LD    +L 
Sbjct: 247 L--LVLLNVQNA-----KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 507 PEETRYHGTETLLQ--LNQKFD-----ALKGTLRHFSLIPPGGGGILTHSLAHIASWLKV 559
           P+E      ++LL   L+ +        L    R  S+I       +   LA   +W  V
Sbjct: 300 PDE-----VKSLLLKYLDCRPQDLPREVLTTNPRRLSII----AESIRDGLATWDNWKHV 350

Query: 560 HQVKEADQANDGIESVICRVESY-LRE 585
                 D+    IES +  +E    R+
Sbjct: 351 ----NCDKLTTIIESSLNVLEPAEYRK 373
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00