Citrus Sinensis ID: 006639

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------
MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
cccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccEEEcccccccccHHHHcccccccEEEEEccccccccHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHHHccHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccccccccccccEEEEEccccccccccccccccHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccc
ccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccEEEEEcccccccccEEEHHHHHHHHHccccHHEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEcccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHcccccccEEEEEEccccccccccccEEEEEccccccccccccEEEcccccEEEEEEcccccccccccccccHHHHHHHccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHcHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccHHHcccccccHHHHHHHHHHEcccccHHHHHHHHHHHHHHHHccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHEEEHcHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccc
mantkssclplyekvfhkntyHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVnckwtpltyktypQRLQERiqelppvdmfvttadaeleppiitVNTVLSLLAVdypvhklacyvsddacsplnFYSLVEASKFAKLWVPFCkkynvqirapfryfpdsepsdsssgeLLQDWKNMKKEYDKLSQNIEHAakrsslfdltggmtvfsntermnhpTIVKVISenkgglsdeiphlvyisrekrpkhphhykagAMNVLTRVSglmtnapfmlnvdcdmyannPEIVLQAMCLHLgsknenefafiqspqyfydrpenlCILNEYigkgivgiqgpfyqgtgtfhrrdVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTlegktggyssnisrsldeAHRVADcgyeygsswgdevgclygataednltglvihskgwrsgyclpiphaflgcaspsgpagmrQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWglrsipelcyialpayciitnstflpkvqeptvlIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
mantkssclplYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFryfpdsepsdssSGELLQDWKNMKKEYDKLSQNIEHaakrsslfdlTGGMTVfsntermnhpTIVKVIsenkgglsdEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAaqtlegktggysSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
MANTKSSCLPLYEKVFHKNTYHRAldviilflllcllfyrlstlKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFpdsepsdsssgellQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
*******CLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF***************************************LFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISR*******HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIK*********************DEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP******RQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK********
************EKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY*****************WKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRP**PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFE************
MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP***********LLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK********
******SCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK********
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPSDSSSGELLQDxxxxxxxxxxxxxxxxxxxxxSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRCR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query637 2.2.26 [Sep-21-2011]
Q8RX83 755 Cellulose synthase-like p yes no 0.981 0.827 0.514 0.0
O80891 755 Cellulose synthase-like p no no 0.981 0.827 0.535 0.0
O23386 757 Cellulose synthase-like p no no 0.976 0.821 0.503 1e-180
O80899 757 Cellulose synthase-like p no no 0.978 0.822 0.502 1e-176
Q0WT40 757 Cellulose synthase-like p no no 0.978 0.822 0.496 1e-171
Q339N5 750 Cellulose synthase-like p yes no 0.919 0.781 0.515 1e-170
O80898 757 Cellulose synthase-like p no no 0.981 0.825 0.482 1e-170
Q7XUT9 762 Cellulose synthase-like p no no 0.841 0.703 0.447 1e-136
Q7PC71 762 Cellulose synthase-like p N/A no 0.841 0.703 0.447 1e-136
Q7XUU0 792 Putative cellulose syntha no no 0.778 0.626 0.482 1e-132
>sp|Q8RX83|CSLB3_ARATH Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1 Back     alignment and function desciption
 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/642 (51%), Positives = 439/642 (68%), Gaps = 17/642 (2%)

Query: 1   MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESC 60
           MA++ SS  PL EK+ +KN + R +D+ IL  L  LL YR+  +  +   W +AFLCES 
Sbjct: 1   MADSSSSLPPLCEKISYKNYFLRVVDLTILGFLFSLLLYRILLMNQNNSVWVVAFLCESF 60

Query: 61  FTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLL 120
           F+FIW+LI + KW+P +YK+YP+RL ER+ +LP VDMFVTTAD   EPPI+  NT+LSLL
Sbjct: 61  FSFIWLLITSIKWSPASYKSYPERLDERVHDLPSVDMFVTTADPVREPPILVANTLLSLL 120

Query: 121 AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPS 180
           AV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYN+++RAPFRYF +  P+
Sbjct: 121 AVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNIKVRAPFRYFLN-PPA 179

Query: 181 DSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVIS 240
            + S E  +DW+  K+EY+KLS+ +E A   S   D       FSNT+  +H TIVKV+ 
Sbjct: 180 ATESSEFSKDWEITKREYEKLSRRVEDATGDSHWLDAEDDFEDFSNTKPNDHSTIVKVVW 239

Query: 241 ENKGGLS--DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 298
           ENKGG+   +E+PH VYISREKRP + HHYKAGAMN L RVSGLMTNAP+MLNVDCDMYA
Sbjct: 240 ENKGGVGVENEVPHFVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYA 299

Query: 299 NNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYD-RPENLCILNEYIGKGIVGIQGPFYQ 356
           N  ++V QAMC+ L  S N N  AF+Q PQ FYD   + L +L  Y+G+GI GIQGP Y 
Sbjct: 300 NEADVVRQAMCIFLQKSMNSNHCAFVQFPQEFYDSNADELTVLQSYLGRGIAGIQGPTYA 359

Query: 357 GTGTFHRRDVVYGLCLDQIEHQGN---------IVEDELLKKFGNSKEFIKSAAQTLEGK 407
           G+G FH R V+YGL +D +E  G+         + E+ L ++FGNS E + S  + L+ K
Sbjct: 360 GSGCFHTRRVMYGLSIDDLEDDGSLSSLATRKYLAEENLAREFGNSNEMVTSVVEALQRK 419

Query: 408 TGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYC 467
                + ++ SL+ A  V  C +EY +SWG  +G LY +TAED  T + IHS+GW S Y 
Sbjct: 420 PNP-QNTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYI 478

Query: 468 LPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWIL 527
            P P AFLG   P GP  M QQ+RWATGLLE+LF+K++P++     K++FRQ LAYL+I 
Sbjct: 479 SPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIF 538

Query: 528 TWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSI 587
           TWGLRSIPEL Y  LPAYC++ N+   PK     +++   L  ++ LY+L E++  G S+
Sbjct: 539 TWGLRSIPELIYCLLPAYCLLHNAALFPKGVYLGIVV--TLVGMHCLYSLWEFMSLGFSV 596

Query: 588 RSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 629
           +SW+ +    RI TT +WLF + +  L+  G S+ VF +T+K
Sbjct: 597 QSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKK 638
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|O80891|CSLB4_ARATH Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=3 SV=1 Back     alignment and function description
>sp|O23386|CSLB6_ARATH Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2 Back     alignment and function description
>sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WT40|CSLB5_ARATH Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2 Back     alignment and function description
>sp|Q339N5|CSLH1_ORYSJ Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2 Back     alignment and function description
>sp|O80898|CSLB1_ARATH Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2 Back     alignment and function description
>sp|Q7XUT9|CSLH2_ORYSJ Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3 Back     alignment and function description
>sp|Q7PC71|CSLH2_ORYSI Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUU0|CSLH3_ORYSJ Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query637
255576879 749 transferase, putative [Ricinus communis] 0.971 0.826 0.630 0.0
224128982 746 hypothetical protein POPTRDRAFT_246659 [ 0.976 0.833 0.610 0.0
224068967 749 predicted protein [Populus trichocarpa] 0.978 0.831 0.620 0.0
429326480 746 cellulose synthase-like protein [Populus 0.970 0.828 0.605 0.0
297739182 1566 unnamed protein product [Vitis vinifera] 0.979 0.398 0.610 0.0
297739175 751 unnamed protein product [Vitis vinifera] 0.984 0.834 0.613 0.0
359485623 766 PREDICTED: cellulose synthase-like prote 0.984 0.818 0.6 0.0
359485493 751 PREDICTED: cellulose synthase-like prote 0.981 0.832 0.600 0.0
359485490 757 PREDICTED: cellulose synthase-like prote 0.973 0.819 0.601 0.0
359485619 751 PREDICTED: cellulose synthase-like prote 0.973 0.825 0.606 0.0
>gi|255576879|ref|XP_002529325.1| transferase, putative [Ricinus communis] gi|223531196|gb|EEF33042.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/639 (63%), Positives = 484/639 (75%), Gaps = 20/639 (3%)

Query: 10  PLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIV 69
           PLYE++  KN  HR LDV +LFLL  LL YRL +L  HGFAWFLA LCES FTFIW L  
Sbjct: 8   PLYERISIKNPIHRTLDVAVLFLLSSLLVYRLYSLDKHGFAWFLALLCESWFTFIWFLTA 67

Query: 70  NCKWTPLTYKTYPQRLQERIQE-LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHK 128
           N KW P+ YKTYP+ L +R++E LP VDMFVTTAD  LEPPIIT+NTVLSLLAVDYPVHK
Sbjct: 68  NAKWNPVKYKTYPEHLSQRVEEFLPAVDMFVTTADPLLEPPIITMNTVLSLLAVDYPVHK 127

Query: 129 LACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP-DSEPSDSSSGEL 187
           LACYVSDD CSPL +YSLVE SKFA+LWVPFCKKYN+Q+RAPFRYF  +S  S  +S E 
Sbjct: 128 LACYVSDDGCSPLTYYSLVETSKFAQLWVPFCKKYNIQVRAPFRYFSNESMISARNSLEF 187

Query: 188 LQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLS 247
            Q+WK +K EY+K S+ I+ AA +S  +DL   + VFSN +R NHP+I+KVI ENK GLS
Sbjct: 188 QQEWKMLKDEYEKFSRKIQDAAGKSVPWDLNDDLAVFSNIDRRNHPSIIKVIWENKKGLS 247

Query: 248 DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 307
           D +PHLVYISREKR KH HHYKAGAMNVLTRVSGL+TNAPFMLNVDCDMY N+P++V +A
Sbjct: 248 DGLPHLVYISREKRLKHAHHYKAGAMNVLTRVSGLVTNAPFMLNVDCDMYVNDPQVVRRA 307

Query: 308 MCLHLGSKNENEFAFIQSPQYFYDRPEN------LCILNEYIGKGIVGIQGPFYQGTGTF 361
           MC  LGS NE EFAF+Q PQ FYD  ++      L ++ EY+G+GI G+QGPFY GTG F
Sbjct: 308 MCFLLGSSNEREFAFVQFPQVFYDELKDDPFGSTLAVVYEYMGRGIAGLQGPFYGGTGCF 367

Query: 362 HRRDVVYGLCLDQIEHQGNIV-----------EDELLKKFGNSKEFIKSAAQTLEGKTGG 410
           HRR V+YGLC D +  + N             + ELL  FGNS EFIKSAAQ L+GKT  
Sbjct: 368 HRRKVIYGLCPDDVGTEKNNATPVSSTYFVHSDKELLNIFGNSMEFIKSAAQALQGKTTS 427

Query: 411 YSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPI 470
              N+S  ++  ++VA CGYEYG++WG EVG  YG+T ED LTGL+IHS+GWRS YC P 
Sbjct: 428 -PRNLSNLVETEYQVAGCGYEYGTAWGTEVGWQYGSTTEDVLTGLMIHSRGWRSAYCTPE 486

Query: 471 PHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWG 530
           P AFLGC+  SGP  + QQKRWATGL+EIL  +++PI+  +  KLQFRQCL YL+ILTWG
Sbjct: 487 PPAFLGCSPSSGPTLLTQQKRWATGLVEILVCRKSPIVTAITAKLQFRQCLVYLFILTWG 546

Query: 531 LRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSW 590
           LRSIPELCY+ LPAYCII+NS FLPK  EP +   +AL ++Y LYT+LEY+Q GLSIR+W
Sbjct: 547 LRSIPELCYMLLPAYCIISNSNFLPKFNEPPIYGYIALIIVYSLYTILEYLQTGLSIRAW 606

Query: 591 WVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 629
           W    MAR++TTSAWL G+++  L+  G SE VFE+TQK
Sbjct: 607 WNKQKMARVITTSAWLIGVLSVVLKILGISETVFEVTQK 645

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128982|ref|XP_002320471.1| hypothetical protein POPTRDRAFT_246659 [Populus trichocarpa] gi|222861244|gb|EEE98786.1| hypothetical protein POPTRDRAFT_246659 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224068967|ref|XP_002302868.1| predicted protein [Populus trichocarpa] gi|222844594|gb|EEE82141.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326480|gb|AFZ78580.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|297739182|emb|CBI28833.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297739175|emb|CBI28826.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485623|ref|XP_003633298.1| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485493|ref|XP_003633282.1| PREDICTED: cellulose synthase-like protein H1-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485490|ref|XP_002269976.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485619|ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera] gi|297739173|emb|CBI28824.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query637
TAIR|locus:2060211 755 CSLB04 "AT2G32540" [Arabidopsi 0.981 0.827 0.515 2.9e-174
TAIR|locus:2060263 755 CSLB03 "AT2G32530" [Arabidopsi 0.981 0.827 0.496 4e-170
TAIR|locus:2060216 757 CSLB02 "AT2G32620" [Arabidopsi 0.979 0.824 0.485 5.9e-160
TAIR|locus:2129915 757 ATCSLB05 "AT4G15290" [Arabidop 0.978 0.822 0.481 2.3e-158
TAIR|locus:2060285 757 CSLB01 "AT2G32610" [Arabidopsi 0.979 0.824 0.475 4e-154
TAIR|locus:2172457 1049 CESA4 "cellulose synthase A4" 0.500 0.304 0.417 1.2e-99
TAIR|locus:2156789 1065 CEV1 "CONSTITUTIVE EXPRESSION 0.609 0.364 0.367 1.9e-98
TAIR|locus:2040080 1065 CESA10 "cellulose synthase 10" 0.536 0.321 0.388 2.6e-98
TAIR|locus:2178935 1026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.599 0.372 0.367 3.2e-98
TAIR|locus:2127776 1081 CESA1 "cellulose synthase 1" [ 0.601 0.354 0.380 4.4e-98
TAIR|locus:2060211 CSLB04 "AT2G32540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1693 (601.0 bits), Expect = 2.9e-174, P = 2.9e-174
 Identities = 331/642 (51%), Positives = 417/642 (64%)

Query:     1 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLCESC 60
             MA + S   PL E++ HK+ + RA                          W +AFLCE+C
Sbjct:     1 MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETC 60

Query:    61 FTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLL 120
             FTF+W+LI N KW+P  YKTYP+RL ER+ ELPPVDMFVTTAD   EPP+I VNTVLSLL
Sbjct:    61 FTFVWLLITNIKWSPADYKTYPERLDERVHELPPVDMFVTTADPVREPPLIVVNTVLSLL 120

Query:   121 AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXX 180
             AV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYNV++RAPF YF      
Sbjct:   121 AVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYFRNSPEA 180

Query:   181 XXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVIS 240
                     +DW+  K+EY+KLSQ +E A   S   D       F NT+  +H TIVKV+ 
Sbjct:   181 AEGSEFS-KDWEMTKREYEKLSQKVEDATGSSHWLDAEDDFEAFLNTKSNDHSTIVKVVW 239

Query:   241 ENKGGLSDE--IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 298
             ENKGG+ DE  +PH+VYISREKRP H HHYKAGAMN L RVSGLMTNAP+MLNVDCDMY 
Sbjct:   240 ENKGGVGDEKEVPHVVYISREKRPNHFHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYV 299

Query:   299 NNPEIVLQAMCLHLG-SKNENEFAFIQSPQYFYD-RPENLCILNEYIGKGIVGIQGPFYQ 356
             N  ++V QAMC+ L  S + N  AF+Q PQ FYD     L +L  Y+G+GI GIQGP Y 
Sbjct:   300 NEADVVRQAMCIFLQKSMDSNHCAFVQYPQDFYDSNVGELTVLQLYLGRGIAGIQGPQYA 359

Query:   357 GTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGK 407
             G+G FH R V+YGL LD +   G++          E+ L ++FGNSKE +KS    L+ K
Sbjct:   360 GSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREFGNSKEMVKSVVDALQRK 419

Query:   408 TGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYC 467
                   N+  SL+ A  +  C YEY +SWG  +G LY +T ED  T + IHS+GW S Y 
Sbjct:   420 PFP-QKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYI 478

Query:   468 LPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWIL 527
              P P AFLGC    GP  M QQ+RWATGLLEILF+K++P++     K++FRQ LAYL++ 
Sbjct:   479 FPDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVF 538

Query:   528 TWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSI 587
             +WGLRSIPEL Y  LPAYC++ NS   PK     ++I L    I+ LYTL E++  G SI
Sbjct:   539 SWGLRSIPELFYCLLPAYCLLHNSALFPKGVYLGIIITLVG--IHCLYTLWEFMNLGFSI 596

Query:   588 RSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 629
             +SW+V     RI TT +WLF +++  L+  G S+ VF +T+K
Sbjct:   597 QSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKK 638
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2060263 CSLB03 "AT2G32530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060216 CSLB02 "AT2G32620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129915 ATCSLB05 "AT4G15290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060285 CSLB01 "AT2G32610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RX83CSLB3_ARATH2, ., 4, ., 1, ., -0.51400.98110.8278yesno
Q339N5CSLH1_ORYSJ2, ., 4, ., 1, ., -0.51590.91990.7813yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_II2039
hypothetical protein (749 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query637
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 0.0
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 1e-128
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-127
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 1e-126
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 1e-126
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 1e-124
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 1e-123
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 1e-123
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 1e-100
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 2e-84
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 5e-37
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 2e-09
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 8e-08
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-07
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 6e-06
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 4e-04
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 4e-04
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information 
 Score =  766 bits (1979), Expect = 0.0
 Identities = 340/642 (52%), Positives = 438/642 (68%), Gaps = 18/642 (2%)

Query: 1   MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESC 60
           MA++ SS  PL E++ HK+ + RA+D+ IL LL  LL YR+  +  +   W +AFLCESC
Sbjct: 1   MADSSSSLPPLCERISHKSYFLRAVDLTILGLLFSLLLYRILHMSENDTVWLVAFLCESC 60

Query: 61  FTFIWILIVNCKWTPLTYKTYPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLL 120
           F+F+W+LI   KW+P  YK YP RL ER+ +LP VDMFV TAD   EPPII VNTVLSLL
Sbjct: 61  FSFVWLLITCIKWSPAEYKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLL 120

Query: 121 AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPDSEPS 180
           AV+YP +KLACYVSDD CSPL ++SL EASKFAK+WVPFCKKYNV++RAPFRYF +  P 
Sbjct: 121 AVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFRYFLNP-PV 179

Query: 181 DSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVIS 240
            +   E  +DW+  K+EY+KLS+ +E A   S   D       FSNT+  +H TIVKV+ 
Sbjct: 180 ATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVW 239

Query: 241 ENKGGLSD--EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 298
           ENKGG+ D  E+PHLVYISREKRP + HHYKAGAMN L RVSGLMTNAP+MLNVDCDMYA
Sbjct: 240 ENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYA 299

Query: 299 NNPEIVLQAMCLHL-GSKNENEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQ 356
           N  ++V QAMC+ L  SKN N  AF+Q PQ FYD   N L +L  Y+G+GI GIQGP Y 
Sbjct: 300 NEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYDSNTNELTVLQSYLGRGIAGIQGPIYI 359

Query: 357 GTGTFHRRDVVYGLCLDQIEHQGNI---------VEDELLKKFGNSKEFIKSAAQTLEGK 407
           G+G FH R V+YGL  D +E  G++          ED L ++FGNSKE +KS    L+ K
Sbjct: 360 GSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRK 419

Query: 408 TGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYC 467
               +S ++ S++ A  V  C YEY +SWG+ +G LY + AED  T + IHS+GW S Y 
Sbjct: 420 PNPQNS-LTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYI 478

Query: 468 LPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWIL 527
            P P AFLG   P GP  M QQ+RWATGL+E+LF+K++P++     K++FRQ LAYL++ 
Sbjct: 479 SPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVF 538

Query: 528 TWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSI 587
           T  LRSIPEL Y  LPAYC++ NS   PK     + I + L  ++ LYTL E++  G S+
Sbjct: 539 T-CLRSIPELIYCLLPAYCLLHNSALFPK--GVYLGIIVTLVGMHCLYTLWEFMSLGFSV 595

Query: 588 RSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK 629
           +SW+V+    RI  TS+WLF + +  L+  G S+ VF +T+K
Sbjct: 596 QSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVTKK 637

Length = 756
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 637
PLN02190 756 cellulose synthase-like protein 100.0
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02436 1094 cellulose synthase A 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454 691 glucosyltransferase MdoH; Provisional 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
COG1215439 Glycosyltransferases, probably involved in cell wa 100.0
PRK11204420 N-glycosyltransferase; Provisional 100.0
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 100.0
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 100.0
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.97
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.97
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.97
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.96
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.96
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.95
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.94
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.94
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.93
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.92
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.92
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.9
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.9
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.89
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.89
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.85
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.78
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.75
cd06438183 EpsO_like EpsO protein participates in the methano 99.74
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.74
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.68
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.62
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.61
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.6
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.58
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.58
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.55
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.55
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.54
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.53
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.53
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.53
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.5
PRK10073328 putative glycosyl transferase; Provisional 99.48
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.47
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.46
PRK10018279 putative glycosyl transferase; Provisional 99.44
cd04188211 DPG_synthase DPG_synthase is involved in protein N 99.41
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 99.4
PRK10063248 putative glycosyl transferase; Provisional 99.34
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 99.32
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.27
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 99.24
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 99.2
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 99.16
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 99.14
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 99.08
COG1216305 Predicted glycosyltransferases [General function p 99.04
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 99.03
KOG2571 862 consensus Chitin synthase/hyaluronan synthase (gly 98.99
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 98.75
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 98.74
KOG2977323 consensus Glycosyltransferase [General function pr 98.18
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 98.06
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 98.03
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 97.79
KOG3737603 consensus Predicted polypeptide N-acetylgalactosam 96.18
KOG3738559 consensus Predicted polypeptide N-acetylgalactosam 95.29
KOG3736578 consensus Polypeptide N-acetylgalactosaminyltransf 94.72
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 93.74
PF03452269 Anp1: Anp1; InterPro: IPR005109 The members of thi 91.43
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 90.61
TIGR02460381 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase 86.99
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 84.48
PRK14503393 mannosyl-3-phosphoglycerate synthase; Provisional 81.91
>PLN02190 cellulose synthase-like protein Back     alignment and domain information 
Probab=100.00  E-value=1.4e-157  Score=1316.22  Aligned_cols=626  Identities=54%  Similarity=0.968  Sum_probs=576.9

Q ss_pred             CCCCCCCCCCceeeeeccchHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639            1 MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKT   80 (637)
Q Consensus         1 ~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~   80 (637)
                      |++.+.+.+||||+++++++++|++.++++++++.|++||+++.++.++.|+++++||+|++|+|+|+|+.+|+|++|.+
T Consensus         1 ~~~~~~~~~pL~~~~~~~~~~~r~~~~~vl~~~~~~l~~R~~~~~~~~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~   80 (756)
T PLN02190          1 MADSSSSLPPLCERISHKSYFLRAVDLTILGLLFSLLLYRILHMSENDTVWLVAFLCESCFSFVWLLITCIKWSPAEYKP   80 (756)
T ss_pred             CCcccCCCCCceeeeeccchhHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHhccceeeecCCCC
Confidence            67788889999999999999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             CcchhhcccCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhh
Q 006639           81 YPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFC  160 (637)
Q Consensus        81 ~~~~l~~~~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc  160 (637)
                      +|++|+++.++||+|||||||+||.||||++|+|||+|+|++|||++|++|||+|||+++.|+++|.||++|||+|||||
T Consensus        81 ~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFC  160 (756)
T PLN02190         81 YPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFC  160 (756)
T ss_pred             CcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccc
Confidence            99999988778999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccccCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEee
Q 006639          161 KKYNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVIS  240 (637)
Q Consensus       161 ~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~  240 (637)
                      ||||||||+||+||+.. ..+..+++|++||++||+||||||.||+++.......+.+|+++.|++++++|||+||||++
T Consensus       161 rK~~IepRaPe~YF~~~-~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll  239 (756)
T PLN02190        161 KKYNVRVRAPFRYFLNP-PVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVW  239 (756)
T ss_pred             cccCCCcCCHHHHhcCC-CCCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEe
Confidence            99999999999999963 23335689999999999999999999999865444444467889999999999999999999


Q ss_pred             cCCCCC--CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCC-
Q 006639          241 ENKGGL--SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNE-  317 (637)
Q Consensus       241 ~~~~~~--~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~-  317 (637)
                      +++++.  +.++|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|||++++++||||+|++.+ 
T Consensus       240 ~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~  319 (756)
T PLN02190        240 ENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNS  319 (756)
T ss_pred             cCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCC
Confidence            986543  55899999999999999999999999999999999999999999999999999999999999999997644 


Q ss_pred             CcEEEEeCCccccCcchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccc---------cchHHHHH
Q 006639          318 NEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQG---------NIVEDELL  387 (637)
Q Consensus       318 ~~va~VQtPq~f~D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~---------~~~~~~~~  387 (637)
                      +++||||+||+|+|+|+| +++||++.+.|+||+|||+|+||||+|||+||||.+++..+..+         .....++.
T Consensus       320 ~~~~fVQfPQ~F~D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~  399 (756)
T PLN02190        320 NHCAFVQFPQEFYDSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLA  399 (756)
T ss_pred             CeeEEEeCchhhccccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhh
Confidence            489999999999999999 99999999999999999999999999999999998765533221         02233466


Q ss_pred             HhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEe
Q 006639          388 KKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYC  467 (637)
Q Consensus       388 ~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~  467 (637)
                      ++||+|.+|+.|+....++...... .+++.+++|++|++|+||++|+||+|+||.|+|+|||+.||++||++|||++|+
T Consensus       400 ~~fg~s~~f~~s~~~~~~~~~~~~~-~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~  478 (756)
T PLN02190        400 REFGNSKEMVKSVVDALQRKPNPQN-SLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYI  478 (756)
T ss_pred             hhcCCcHHHHHHHHHHhccCCCCcc-chHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEec
Confidence            8999999999999777765443221 345789999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 006639          468 LPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCI  547 (637)
Q Consensus       468 ~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~L  547 (637)
                      +|+++++.|.+|+++.+.+.||+||++|.+|++++++||++.+..++|++.||++|+++++ |+.++++++|+++|++||
T Consensus       479 ~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~L  557 (756)
T PLN02190        479 SPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCL  557 (756)
T ss_pred             CCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            9878899999999999999999999999999999999999874458999999999999877 999999999999999999


Q ss_pred             HhCCccccccCchhhHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 006639          548 ITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEIT  627 (637)
Q Consensus       548 l~g~~i~p~~~~~~~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VT  627 (637)
                      ++|.+++|..  +++.++++++++++++++++++|+|.++++|||+||+|+|.++++|++|++++++|+||+++.+|.||
T Consensus       558 l~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vT  635 (756)
T PLN02190        558 LHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVT  635 (756)
T ss_pred             HcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEe
Confidence            9999999974  56667778888999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCC
Q 006639          628 QKIH  631 (637)
Q Consensus       628 pKg~  631 (637)
                      +|..
T Consensus       636 sK~~  639 (756)
T PLN02190        636 KKTM  639 (756)
T ss_pred             eccc
Confidence            9964

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query637
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 3e-06
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 438 DEVGCLYGAT-AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQK-RWATG 495
           DE G   G T  ED  T L IHS+GW+S Y   I  A +    P   A   QQ+ RWATG
Sbjct: 330 DEAGGFAGETITEDAETALEIHSRGWKSLY---IDRAMIAGLQPETFASFIQQRGRWATG 386
Query: 496 LLEILFSKRNPILATLIGKLQFRQC 520
           ++++L  K NP+    +G  Q R C
Sbjct: 387 MMQMLLLK-NPLFRRGLGIAQ-RLC 409

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query637
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.76
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.76
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.74
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.71
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.7
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.69
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.68
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 99.46
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 99.46
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 99.42
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 99.35
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 99.27
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 99.0
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 98.67
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 97.9
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 97.83
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 97.79
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=2.6e-49  Score=464.65  Aligned_cols=430  Identities=21%  Similarity=0.293  Sum_probs=327.4

Q ss_pred             HHHHHHH-HHHHHHHHHHHHHhccccCch------hHHHHHHHHHHHHHHHHHHHHHheeccccCCCCcchhhcccCCCC
Q 006639           21 YHRALDV-IILFLLLCLLFYRLSTLKNHG------FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELP   93 (637)
Q Consensus        21 ~~r~~~~-~~~~~~~~yl~wR~~~~~~~~------~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~P   93 (637)
                      ..|++.+ +.+++.++|++||++.+++..      +.|++++++|+++.+.|++..+..++|..|...++.   .+++.|
T Consensus        64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~---~~~~~P  140 (802)
T 4hg6_A           64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL---QPEELP  140 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC---CTTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC---CccCCC
Confidence            3455544 444556899999999998842      346789999999999999999999999888775543   246789


Q ss_pred             ceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCcc
Q 006639           94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY  173 (637)
Q Consensus        94 ~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y  173 (637)
                      .|+|+|||||   |+++++.+|+.|+++++||.++++|+|+|||++|.|.+.                            
T Consensus       141 ~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------------  189 (802)
T 4hg6_A          141 TVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------------  189 (802)
T ss_dssp             CEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC----------------------------
T ss_pred             cEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc----------------------------
Confidence            9999999999   888888999999999999999999999999999987421                            


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeE
Q 006639          174 FPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHL  253 (637)
Q Consensus       174 f~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l  253 (637)
                               .+++.+++.++...+.++++++.             +                                 +
T Consensus       190 ---------~d~~i~~~~~~~~~~l~~~~~~~-------------~---------------------------------v  214 (802)
T 4hg6_A          190 ---------PDPELAQKAQERRRELQQLCREL-------------G---------------------------------V  214 (802)
T ss_dssp             ---------SSHHHHHHHHHHHHHHHHHHHHH-------------T---------------------------------C
T ss_pred             ---------CCHHHHHHHHhhhHHHHHHHHhc-------------C---------------------------------c
Confidence                     12333333332222233232221             1                                 4


Q ss_pred             EEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--C
Q 006639          254 VYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--D  331 (637)
Q Consensus       254 ~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~--D  331 (637)
                      .|+.|+++    +++|+||+|.|++    .+++|||+++|||+++ +||+|++++.+|.+   ++++++||+|+.+.  |
T Consensus       215 ~~i~~~~~----~~GKa~alN~gl~----~a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~---dp~v~~V~~~~~~~~~~  282 (802)
T 4hg6_A          215 VYSTRERN----EHAKAGNMSAALE----RLKGELVVVFDADHVP-SRDFLARTVGYFVE---DPDLFLVQTPHFFINPD  282 (802)
T ss_dssp             EEEECSSC----CSHHHHHHHHHHH----HCCCSEEEECCTTEEE-CTTHHHHHHHHHHH---SSSCCEEECCCCBSSCC
T ss_pred             EEEEecCC----CCcchHHHHHHHH----hcCCCEEEEECCCCCc-ChHHHHHHHHHHhc---CCCeEEEeccEEEeCCc
Confidence            77888653    4689999999999    6899999999999995 89999999999962   47899999999988  3


Q ss_pred             cch----------h-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHH
Q 006639          332 RPE----------N-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSA  400 (637)
Q Consensus       332 ~~~----------~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~  400 (637)
                      +..          + ...++...+.+.+.+++.+++|+++++||+++.                                
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~--------------------------------  330 (802)
T 4hg6_A          283 PIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD--------------------------------  330 (802)
T ss_dssp             HHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH--------------------------------
T ss_pred             hHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH--------------------------------
Confidence            322          1 467888999999999999999999999999884                                


Q ss_pred             HHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCC
Q 006639          401 AQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP  480 (637)
Q Consensus       401 ~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~  480 (637)
                                             ++|              ||++++++||.+++++++++||++.|++  ++.+++++|+
T Consensus       331 -----------------------~vG--------------gf~~~~~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~  371 (802)
T 4hg6_A          331 -----------------------EAG--------------GFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPE  371 (802)
T ss_dssp             -----------------------HHT--------------TCCCSSSSHHHHHHHHHHTTTCCEEECC--CCCEEECCCC
T ss_pred             -----------------------HcC--------------CcCCCCcchHHHHHHHHHHcCCeEEEec--CCEEEecCCC
Confidence                                   243              7999999999999999999999999996  4689999999


Q ss_pred             CHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCch
Q 006639          481 SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEP  560 (637)
Q Consensus       481 tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~  560 (637)
                      |++++++||.||++|.+|++++ ++|++.   +++++.||+.|+..+.+++.+++.++++++|+++++++..+++.....
T Consensus       372 t~~~~~~Qr~RW~~G~~q~l~~-~~pl~~---~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~  447 (802)
T 4hg6_A          372 TFASFIQQRGRWATGMMQMLLL-KNPLFR---RGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEE  447 (802)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHH-SCTTSC---SSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHH
T ss_pred             CHHHHHHHHHHHHccHHHHHHH-hCcccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHH
Confidence            9999999999999999999975 678775   789999999999998899999999999999999999997666542111


Q ss_pred             hhHHHHHHHHHHHHHHHHHH-HHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcCcc
Q 006639          561 TVLIPLALFLIYKLYTLLEY-IQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR  635 (637)
Q Consensus       561 ~~~~l~~~fl~~~l~~ll~~-~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~~~  635 (637)
                          +...++++++..++.. ...|.....|| ...++.+.   + ++.+...+..++++++.+|+||+||...++
T Consensus       448 ----~~~~~lp~~l~~~~~~~~~~~~~r~~~~-~~l~~~~~---~-~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~  514 (802)
T 4hg6_A          448 ----VLAYMPGYLAVSFLVQNALFARQRWPLV-SEVYEVAQ---A-PYLARAIVTTLLRPRSARFAVTAKDETLSE  514 (802)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHTTTSCTTH-HHHHHHHH---H-HHHHHHHHHHHHSTTCCCCCCCCCCCCCSS
T ss_pred             ----HHHHHHHHHHHHHHHHHHHhcCcHHHHH-HHHHHHHH---H-HHHHHHHHHHHhCCCCCcceECCCCccccc
Confidence                1223333333322221 22232223344 33333221   1 222223334456778899999999986654
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query637
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.77
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 99.59
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.37
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 98.27
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 93.22
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1e-18  Score=180.37  Aligned_cols=117  Identities=12%  Similarity=0.007  Sum_probs=91.3

Q ss_pred             cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhcccccc
Q 006639           89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR  168 (637)
Q Consensus        89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r  168 (637)
                      ++++|.|+|+||+||   |...++.+||.|++++.||....+|+|+||||+|.|.....|.                   
T Consensus        18 ~~~~P~vSIIIp~yN---e~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~-------------------   75 (328)
T d1xhba2          18 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------   75 (328)
T ss_dssp             CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH-------------------
T ss_pred             CCCCCCEEEEEeccC---CcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHH-------------------
Confidence            467999999999999   7767899999999999999655699999999999864332221                   


Q ss_pred             CCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCC
Q 006639          169 APFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSD  248 (637)
Q Consensus       169 ~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  248 (637)
                                                         .++.                        ++               
T Consensus        76 -----------------------------------~~~~------------------------~~---------------   81 (328)
T d1xhba2          76 -----------------------------------YVKK------------------------LK---------------   81 (328)
T ss_dssp             -----------------------------------HHHS------------------------SS---------------
T ss_pred             -----------------------------------HHHh------------------------cC---------------
Confidence                                               0100                        00               


Q ss_pred             CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639          249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG  313 (637)
Q Consensus       249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d  313 (637)
                        +.+.++..++     +.+.++|.|.|++    .++||||+.+|+|.++ .|++|.+++.+|.+
T Consensus        82 --~~i~vi~~~~-----n~G~~~a~N~Gi~----~a~gd~i~flD~D~~~-~p~~l~~l~~~~~~  134 (328)
T d1xhba2          82 --VPVHVIRMEQ-----RSGLIRARLKGAA----VSRGQVITFLDAHCEC-TAGWLEPLLARIKH  134 (328)
T ss_dssp             --SCEEEEECSS-----CCCHHHHHHHHHH----HCCSSEEEEEESSEEE-CTTCHHHHHHHHHH
T ss_pred             --CCeEEEEecc-----cccchHHHHHHHH----hhhcceeeecCccccc-ChhHHHHHHHHHhc
Confidence              1234444433     2479999999999    7999999999999996 89999999999985
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure