Citrus Sinensis ID: 006663

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630------
MAESLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQKEKHQNDLSDISA
cccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccEEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccccccc
cccEEEEcccccccHHHHHHHHHHHHcccccccHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEEEEcHHHcccccccccEEEEEEcccEHHccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccHHHHcccccEEEEHHHHHHHHHHHHcccccccccccccc
maeslsvnfsgpksfstKLKSkcketlfpddpfkqfRNEKHRAIKALQYFipffewipnynlkllrYDVLAGITITslaipqgisyaklasippiiglyssfvpplvyavfgsskhlaVGTVAACSLLIADtigqkvppkkdptlYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKglfglkhfttkTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLknrkpklfwvsaMAPMVTVVVGCLFAYFAHAEKHGIQIVgdlrkginppsigylnfkseyLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSftscylttgpfsktavNFNAGCKTAMSNVVMSFCMMLVLLFLaplfsytplVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVarpatcklgkisdsnlyldteqyqhaqgfpgililqlgspiyfanCNYIRERVLRWIRDeqvlsnskpdvIEHVLLdlsgvstidmTGIAAFREILRILEAKSIKMklinprigvMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQkekhqndlsdisa
maeslsvnfsgpksfstklkskcKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQvlsnskpdviEHVLLdlsgvstidMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLqkekhqndlsdisa
MAESLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKagiitalialaegiaiaRSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQKEKHQNDLSDISA
**********************************QFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSL**************
*******************************************IKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDA*******************
********************SKCKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQ*************
**ESLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQ*************
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MAESLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQKEKHQNDLSDISA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query636 2.2.26 [Sep-21-2011]
Q94LW6634 Probable sulfate transpor yes no 0.965 0.968 0.689 0.0
Q9SV13658 Sulfate transporter 3.1 O no no 0.970 0.937 0.568 0.0
O04289646 Sulfate transporter 3.2 O no no 0.985 0.970 0.527 0.0
Q9LW86653 Probable sulfate transpor no no 0.959 0.934 0.486 0.0
Q9SXS2631 Probable sulfate transpor no no 0.913 0.920 0.508 1e-178
Q9SAY1649 Sulfate transporter 1.1 O no no 0.952 0.933 0.491 1e-172
P53392662 High affinity sulfate tra N/A no 0.937 0.900 0.474 1e-169
P53391667 High affinity sulfate tra N/A no 0.937 0.893 0.471 1e-166
Q9FEP7656 Sulfate transporter 1.3 O no no 0.946 0.917 0.473 1e-164
Q9MAX3653 Sulfate transporter 1.2 O no no 0.944 0.920 0.472 1e-157
>sp|Q94LW6|SUT35_ARATH Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1 Back     alignment and function desciption
 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/625 (68%), Positives = 511/625 (81%), Gaps = 11/625 (1%)

Query: 7   VNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKA---LQYFIPFFEWIPNYNLK 63
           VNFS P+ F +K KSKCKET FPDDPFK    E +R +K    L+YF+P FEW+P Y+++
Sbjct: 17  VNFSTPRGFGSKFKSKCKETFFPDDPFKPISQEPNRLLKTKKLLEYFVPIFEWLPKYDMQ 76

Query: 64  LLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVA 123
            L+YDVLAGITITSLA+PQGISYAKLASIPPIIGLYSSFVPP VYAVFGSS +LAVGTVA
Sbjct: 77  KLKYDVLAGITITSLAVPQGISYAKLASIPPIIGLYSSFVPPFVYAVFGSSNNLAVGTVA 136

Query: 124 ACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITG 183
           ACSLLIA+T G+++  K +P LYLHL+FTAT  TG+FQ A+GFLRLGILVDFLSHSTITG
Sbjct: 137 ACSLLIAETFGEEMI-KNEPELYLHLIFTATLITGLFQFAMGFLRLGILVDFLSHSTITG 195

Query: 184 FMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQF 243
           FMGGTAIII LQQLKG+FGL HFT KTDVVSVLH++  NR EW+W+S + G+ FL+FLQ 
Sbjct: 196 FMGGTAIIILLQQLKGIFGLVHFTHKTDVVSVLHSILDNRAEWKWQSTLAGVCFLVFLQS 255

Query: 244 TRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNF 303
           TRY+K R PKLFWVSAM PMV VVVGC+ AY      HGI  VG L+KG+NPPSI  LNF
Sbjct: 256 TRYIKQRYPKLFWVSAMGPMVVVVVGCVVAYLVKGTAHGIATVGPLKKGLNPPSIQLLNF 315

Query: 304 KSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCY 363
            S+YL +  KAGI+T LIALAEGIAI RSFA+M+NEQ DGNKEMIAFGLMN++GSFTSCY
Sbjct: 316 DSKYLGMVFKAGIVTGLIALAEGIAIGRSFAVMKNEQTDGNKEMIAFGLMNVIGSFTSCY 375

Query: 364 LTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGL 423
           LTTGPFSKTAVN+NAG KT MSNVVM  CMMLVLLFLAPLFSYTPLV LSAIIMSAM GL
Sbjct: 376 LTTGPFSKTAVNYNAGTKTPMSNVVMGVCMMLVLLFLAPLFSYTPLVGLSAIIMSAMLGL 435

Query: 424 INYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLG 483
           INYEE   LFKVDK DF +CM+AF GV+F+SMD GL++SVG +++R L+YVARP+TCKLG
Sbjct: 436 INYEEMYHLFKVDKFDFLVCMSAFFGVSFLSMDYGLIISVGFSIVRALLYVARPSTCKLG 495

Query: 484 KISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPD 543
           +I +S ++ D EQY  ++   G +ILQLGSP++FAN  Y+RER+LRWIRDE       P+
Sbjct: 496 RIPNSVMFRDIEQYPASEEMLGYIILQLGSPVFFANSTYVRERILRWIRDE-------PE 548

Query: 544 VIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIG 603
            IE +LLDLSGVSTIDMTG+    EI RIL +K+IKM +INPR  V++KM+LS F++ IG
Sbjct: 549 AIEFLLLDLSGVSTIDMTGMETLLEIQRILGSKNIKMVIINPRFEVLEKMMLSHFVEKIG 608

Query: 604 KDSVFLSIEDAIDACRFSLQKEKHQ 628
           K+ +FLSI+DA+ ACRF+L   K +
Sbjct: 609 KEYMFLSIDDAVQACRFNLTTTKPE 633
H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function description
>sp|O04289|SUT32_ARATH Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAX3|SUT12_ARATH Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query636
255549068682 sulfate transporter, putative [Ricinus c 0.992 0.925 0.730 0.0
117557144633 sulfate transporter, partial [Populus tr 0.971 0.976 0.734 0.0
224119712648 sulfate/bicarbonate/oxalate exchanger an 0.971 0.953 0.735 0.0
225445290648 PREDICTED: probable sulfate transporter 0.979 0.961 0.711 0.0
45720463635 plasma membrane sulphate transporter [Br 0.957 0.959 0.691 0.0
225445292637 PREDICTED: probable sulfate transporter 0.987 0.985 0.682 0.0
297738850712 unnamed protein product [Vitis vinifera] 0.982 0.877 0.684 0.0
297812143634 SULTR3_5 [Arabidopsis lyrata subsp. lyra 0.965 0.968 0.688 0.0
18419967634 putative sulfate transporter 3.5 [Arabid 0.965 0.968 0.689 0.0
443427638640 SST1-like protein [Pisum sativum] 0.976 0.970 0.652 0.0
>gi|255549068|ref|XP_002515590.1| sulfate transporter, putative [Ricinus communis] gi|223545534|gb|EEF47039.1| sulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/635 (73%), Positives = 542/635 (85%), Gaps = 4/635 (0%)

Query: 4   SLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAI---KALQYFIPFFEWIPNY 60
           S  VNF+ P+SF   LKS  KET FPDDPF+QF+NEK R+    KA+QYFIP FEW+P Y
Sbjct: 8   SQKVNFATPRSFFATLKSDSKETFFPDDPFRQFKNEKKRSARFKKAVQYFIPVFEWLPKY 67

Query: 61  NLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVG 120
           NL+   +D+LAGITITSLAIPQGISYAKLA++PPIIGLYSSFVPPL+Y+VFG+SKH+A+G
Sbjct: 68  NLRTFHFDLLAGITITSLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSVFGNSKHIAIG 127

Query: 121 TVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHST 180
           TVAACSLLI+DTIGQKV  + +P LYLHLVFT TFFTGIFQ+ LG LR+GILVDFLSHST
Sbjct: 128 TVAACSLLISDTIGQKVSFQDEPELYLHLVFTVTFFTGIFQSLLGLLRMGILVDFLSHST 187

Query: 181 ITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIF 240
           ITGFMGGTA +I LQQLKG+ G+KHFTTKTDVVSVL AVF NR EW W+SAV+G+ FLIF
Sbjct: 188 ITGFMGGTATLIILQQLKGMLGMKHFTTKTDVVSVLTAVFKNRHEWHWQSAVVGVIFLIF 247

Query: 241 LQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGY 300
           LQFTR+L+ RKP LFWVSA++PM+ VV GCLFAYFAHA+KHGI IVGDLRKG+NP SI Y
Sbjct: 248 LQFTRFLRRRKPNLFWVSAISPMLVVVAGCLFAYFAHADKHGIPIVGDLRKGLNPLSIKY 307

Query: 301 LNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFT 360
           LNF S+YL  T+KAG+IT LIALAEGIAI RSFAIM+NEQ+DGNKEMIAFG MNIVGSFT
Sbjct: 308 LNFDSKYLPQTIKAGLITGLIALAEGIAIGRSFAIMRNEQVDGNKEMIAFGFMNIVGSFT 367

Query: 361 SCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAM 420
           SCYLTTGPFSK+AVNFN+GC+T M+NVVMS CMML LLFLAPLFSYTPLVALSAIIMSAM
Sbjct: 368 SCYLTTGPFSKSAVNFNSGCRTQMANVVMSICMMLTLLFLAPLFSYTPLVALSAIIMSAM 427

Query: 421 FGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATC 480
           FGLINYEE I LFKVDK DF IC++ FLGVAFISMD GLM+S+GLAL+R  +  ARPATC
Sbjct: 428 FGLINYEEIIHLFKVDKFDFLICLSCFLGVAFISMDYGLMISIGLALVRLFLNAARPATC 487

Query: 481 KLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNS 540
           +LGKI DSNLY DTEQY      PGIL LQ+GSPIYFAN NY+RER+LRWI+DE+ +S+S
Sbjct: 488 RLGKIPDSNLYRDTEQYPGLTRVPGILALQVGSPIYFANSNYLRERILRWIKDEEDISDS 547

Query: 541 KPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFID 600
           K + +EHVLLDLSGV++ID+TGI +  E  +IL+A+ IKM +INPR+ VM+KMI S F D
Sbjct: 548 KGEPVEHVLLDLSGVTSIDITGIESLIETHKILQARGIKMAIINPRLDVMEKMIKSLFTD 607

Query: 601 VIGKDSVFLSIEDAIDACRFSLQKEKHQNDLSDIS 635
            IGK+SVFLS+EDA++A  FSL  E  +  L+++S
Sbjct: 608 KIGKESVFLSVEDAVEASLFSLSTET-KGRLANVS 641

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|117557144|gb|ABK35749.1| sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|224119712|ref|XP_002331142.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] gi|222873225|gb|EEF10356.1| sulfate/bicarbonate/oxalate exchanger and transporter sat-1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225445290|ref|XP_002281248.1| PREDICTED: probable sulfate transporter 3.5 [Vitis vinifera] gi|297738849|emb|CBI28094.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|45720463|emb|CAG17932.1| plasma membrane sulphate transporter [Brassica oleracea var. acephala] Back     alignment and taxonomy information
>gi|225445292|ref|XP_002281258.1| PREDICTED: probable sulfate transporter 3.5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738850|emb|CBI28095.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297812143|ref|XP_002873955.1| SULTR3_5 [Arabidopsis lyrata subsp. lyrata] gi|297319792|gb|EFH50214.1| SULTR3_5 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18419967|ref|NP_568377.1| putative sulfate transporter 3.5 [Arabidopsis thaliana] gi|37089595|sp|Q94LW6.1|SUT35_ARATH RecName: Full=Probable sulfate transporter 3.5 gi|14141684|dbj|BAB55634.1| sulfate transporter [Arabidopsis thaliana] gi|110741883|dbj|BAE98883.1| sulfate transporter [Arabidopsis thaliana] gi|332005346|gb|AED92729.1| putative sulfate transporter 3.5 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|443427638|gb|AGC92012.1| SST1-like protein [Pisum sativum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query636
TAIR|locus:2183139634 SULTR3;5 "sulfate transporter 0.962 0.965 0.669 1.3e-224
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.966 0.934 0.554 7.7e-190
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.988 0.973 0.507 6.7e-175
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.966 0.941 0.469 5.3e-159
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.948 0.955 0.482 2.1e-157
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.963 0.944 0.477 1.7e-155
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.946 0.917 0.463 2.8e-153
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.944 0.920 0.464 1.8e-149
TAIR|locus:2184158677 SULTR2;1 "sulfate transporter 0.959 0.901 0.424 1.2e-129
TAIR|locus:2029496677 AST56 [Arabidopsis thaliana (t 0.896 0.841 0.427 1.5e-124
TAIR|locus:2183139 SULTR3;5 "sulfate transporter 3;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2168 (768.2 bits), Expect = 1.3e-224, P = 1.3e-224
 Identities = 417/623 (66%), Positives = 495/623 (79%)

Query:     7 VNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKA---LQYFIPFFEWIPNYNLK 63
             VNFS P+ F +K KSKCKET FPDDPFK    E +R +K    L+YF+P FEW+P Y+++
Sbjct:    17 VNFSTPRGFGSKFKSKCKETFFPDDPFKPISQEPNRLLKTKKLLEYFVPIFEWLPKYDMQ 76

Query:    64 LLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVA 123
              L+YDVLAGITITSLA+PQGISYAKLASIPPIIGLYSSFVPP VYAVFGSS +LAVGTVA
Sbjct:    77 KLKYDVLAGITITSLAVPQGISYAKLASIPPIIGLYSSFVPPFVYAVFGSSNNLAVGTVA 136

Query:   124 ACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHSTITG 183
             ACSLLIA+T G+++  K +P LYLHL+FTAT  TG+FQ A+GFLRLGILVDFLSHSTITG
Sbjct:   137 ACSLLIAETFGEEMI-KNEPELYLHLIFTATLITGLFQFAMGFLRLGILVDFLSHSTITG 195

Query:   184 FMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIFLQF 243
             FMGGTAIII LQQLKG+FGL HFT KTDVVSVLH++  NR EW+W+S + G+ FL+FLQ 
Sbjct:   196 FMGGTAIIILLQQLKGIFGLVHFTHKTDVVSVLHSILDNRAEWKWQSTLAGVCFLVFLQS 255

Query:   244 TRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGYLNF 303
             TRY+K R PKLFWVSAM PMV VVVGC+ AY      HGI  VG L+KG+NPPSI  LNF
Sbjct:   256 TRYIKQRYPKLFWVSAMGPMVVVVVGCVVAYLVKGTAHGIATVGPLKKGLNPPSIQLLNF 315

Query:   304 KSEYLTVTVKXXXXXXXXXXXXXXXXXRSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCY 363
              S+YL +  K                 RSFA+M+NEQ DGNKEMIAFGLMN++GSFTSCY
Sbjct:   316 DSKYLGMVFKAGIVTGLIALAEGIAIGRSFAVMKNEQTDGNKEMIAFGLMNVIGSFTSCY 375

Query:   364 LTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAMFGL 423
             LTTGPFSKTAVN+NAG KT MSNVVM  CMMLVLLFLAPLFSYTPLV LSAIIMSAM GL
Sbjct:   376 LTTGPFSKTAVNYNAGTKTPMSNVVMGVCMMLVLLFLAPLFSYTPLVGLSAIIMSAMLGL 435

Query:   424 INYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATCKLG 483
             INYEE   LFKVDK DF +CM+AF GV+F+SMD GL++SVG +++R L+YVARP+TCKLG
Sbjct:   436 INYEEMYHLFKVDKFDFLVCMSAFFGVSFLSMDYGLIISVGFSIVRALLYVARPSTCKLG 495

Query:   484 KISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPD 543
             +I +S ++ D EQY  ++   G +ILQLGSP++FAN  Y+RER+LRWIRDE       P+
Sbjct:   496 RIPNSVMFRDIEQYPASEEMLGYIILQLGSPVFFANSTYVRERILRWIRDE-------PE 548

Query:   544 VIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIG 603
              IE +LLDLSGVSTIDMTG+    EI RIL +K+IKM +INPR  V++KM+LS F++ IG
Sbjct:   549 AIEFLLLDLSGVSTIDMTGMETLLEIQRILGSKNIKMVIINPRFEVLEKMMLSHFVEKIG 608

Query:   604 KDSVFLSIEDAIDACRFSLQKEK 626
             K+ +FLSI+DA+ ACRF+L   K
Sbjct:   609 KEYMFLSIDDAVQACRFNLTTTK 631
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008271 "secondary active sulfate transmembrane transporter activity" evidence=IEA
GO:0008272 "sulfate transport" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0015116 "sulfate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184158 SULTR2;1 "sulfate transporter 2;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029496 AST56 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94LW6SUT35_ARATHNo assigned EC number0.68960.96540.9684yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.01570002
sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (648 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query636
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 0.0
COG0659554 COG0659, SUL1, Sulfate permease and related transp 1e-108
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 2e-98
pfam1379283 pfam13792, Sulfate_tra_GLY, Sulfate transporter N- 3e-36
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 2e-35
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 4e-21
pfam01740106 pfam01740, STAS, STAS domain 3e-18
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 2e-06
TIGR00377108 TIGR00377, ant_ant_sig, anti-anti-sigma factor 8e-04
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  531 bits (1370), Expect = 0.0
 Identities = 233/566 (41%), Positives = 346/566 (61%), Gaps = 6/566 (1%)

Query: 52  PFFEWIPNYNLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVF 111
           P   W+P+Y LK  + D++AG+T+  L IPQ ++YA LA + PI GLY+SFVPP +YA+F
Sbjct: 1   PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALF 60

Query: 112 GSSKHLAVGTVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGI 171
           G+S+ +A+G VA  SLL+   I +           + L FT T   GIFQ  LG LRLG 
Sbjct: 61  GTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGF 120

Query: 172 LVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFS---NRKEWRW 228
           L++FLSH+ I+GFM G AI I L QLKGL G+  F T+TD + V+ + ++   N   W W
Sbjct: 121 LIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWNW 180

Query: 229 ESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGD 288
            + VIG+  L+FL +T+ L  R  KL +  A+AP++ V++  L       +K G+ I+G 
Sbjct: 181 CTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGH 240

Query: 289 LRKGINPPSIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMI 348
           +  G+       +    E L       I  A++ L E IAIARSFA M   +ID N+E++
Sbjct: 241 IPSGL--SFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELV 298

Query: 349 AFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTP 408
           A G+ NIVGSF SCY  TG  S+TAVN  AGC+T +S VV +  ++LVLL L PLF Y P
Sbjct: 299 AQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIP 358

Query: 409 LVALSAIIMSAMFGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALL 468
             AL+AII+SA+ GLI+Y+E   L+K DK+DF + +  F GV F S++IGL++ V L+  
Sbjct: 359 QAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAA 418

Query: 469 RTLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVL 528
             L+ +ARP    LG++  + +Y   +QY +A+  PGIL+ ++  P+YFAN   +++R+L
Sbjct: 419 FLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRLL 478

Query: 529 RWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIG 588
           + I DE      +   ++ V+LD+S V  +D +GI A  E+ + L+A+ I++ L NP   
Sbjct: 479 KRIEDETR-RELERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNKA 537

Query: 589 VMDKMILSKFIDVIGKDSVFLSIEDA 614
           V   +     +++IG++  F S+ DA
Sbjct: 538 VRSTLKRGGLVELIGEEHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|205965 pfam13792, Sulfate_tra_GLY, Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>gnl|CDD|129473 TIGR00377, ant_ant_sig, anti-anti-sigma factor Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 636
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.96
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.96
PRK10720428 uracil transporter; Provisional 99.96
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.95
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.92
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.91
PF1379284 Sulfate_tra_GLY: Sulfate transporter N-terminal do 99.9
PRK11412433 putative uracil/xanthine transporter; Provisional 99.9
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.88
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.74
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.71
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.7
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.67
TIGR00834900 ae anion exchange protein. They preferentially cat 99.66
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.61
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 99.56
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.53
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.5
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.44
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.32
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.32
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 99.22
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 99.19
COG3135402 BenE Uncharacterized protein involved in benzoate 99.12
PF1346680 STAS_2: STAS domain 99.12
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 97.97
COG311399 Predicted NTP binding protein (contains STAS domai 97.71
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 93.78
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 93.49
PRK10720428 uracil transporter; Provisional 93.29
TIGR03173406 pbuX xanthine permease. All the seed members of th 92.87
COG0659 554 SUL1 Sulfate permease and related transporters (MF 92.09
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 92.04
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 91.64
PF1421374 DUF4325: Domain of unknown function (DUF4325) 91.27
PRK11660568 putative transporter; Provisional 90.69
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 88.43
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 87.82
PRK11412433 putative uracil/xanthine transporter; Provisional 84.5
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 82.14
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 81.84
COG5439112 Uncharacterized conserved protein [Function unknow 81.62
PRK09928679 choline transport protein BetT; Provisional 81.03
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.4e-100  Score=857.06  Aligned_cols=622  Identities=36%  Similarity=0.644  Sum_probs=553.0

Q ss_pred             cccccCCCCCchHHHHHHhchhccCCCCcchhhhhch----HHHHHHHhcccccccccccCCc-hhhhhhHHHHHHHHHH
Q 006663            4 SLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEK----HRAIKALQYFIPFFEWIPNYNL-KLLRYDVLAGITITSL   78 (636)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~~w~~~y~~-~~l~~D~~aGlt~~~~   78 (636)
                      ++..+.|+.++..++.++..+++..++++.++++++.    ++..+.+++++|+++|+|+|++ +|+.+|++||+|+|++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~l   93 (665)
T KOG0236|consen   14 RASVDTPTFDSSNEEEKSSVENTPTRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGSL   93 (665)
T ss_pred             cccccCCCCCcchhhhhccccCccccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeeee
Confidence            4667788888888888888887766666666666543    4678899999999999999999 8999999999999999


Q ss_pred             HhchHhHHHHHhCCCccchhhhhhhhhHhhhhccCCcccccchhHHHHHHHHHHhhccCCCCC---ChhhHHHHHHHHHH
Q 006663           79 AIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLIADTIGQKVPPKK---DPTLYLHLVFTATF  155 (636)
Q Consensus        79 ~iPq~~aya~laglp~~~GL~s~~i~~lv~~~~G~s~~~~~Gp~a~~al~~~~~v~~~~~~~~---~~~~~~~~~~~~~~  155 (636)
                      .+||+||||.+||+||+|||||+++|+++|++||+|||+++||+|++|+|++.++++..+...   ++..+++++.+++|
T Consensus        94 ~VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~  173 (665)
T KOG0236|consen   94 SVPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTF  173 (665)
T ss_pred             ecchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999988776554322   34567899999999


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHhhHHHHHHHHhhhhhhhCccccCCCCcHHHHH---HHHHhhCCCCchHHHH
Q 006663          156 FTGIFQTALGFLRLGILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVL---HAVFSNRKEWRWESAV  232 (636)
Q Consensus       156 l~Gv~~lllg~~rlg~l~~~ip~~Vi~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  232 (636)
                      ++|++|+++|+||+|++++|+|+|++.||++|+|++++.+|+|.++|++..+...+....+   .+...+.... +.+++
T Consensus       174 l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  252 (665)
T KOG0236|consen  174 LTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKT-LATLV  252 (665)
T ss_pred             HHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccccc-chhhh
Confidence            9999999999999999999999999999999999999999999999998544444433222   2233333333 77899


Q ss_pred             HHHHHHHHHHHHHH-hhhcCCcccccccchhhHHHHHHHHHHHHhhcccc-CeeeeccCCCCCCCCCCCcCccChhhHHH
Q 006663          233 IGISFLIFLQFTRY-LKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKH-GIQIVGDLRKGINPPSIGYLNFKSEYLTV  310 (636)
Q Consensus       233 lg~~~l~~ll~~~~-~~~~~~~~~~~~~~~~li~vi~~t~~~~~~~~~~~-~v~~~g~ip~g~p~~~~~~~~~~~~~~~~  310 (636)
                      ++++++++++..|. ..++.++.+|+|.|.+++.++++|+++|.++.++. ....++++|.|+|+|.+|.+++..    .
T Consensus       253 ~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~----~  328 (665)
T KOG0236|consen  253 LSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTP----Q  328 (665)
T ss_pred             hHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhH----H
Confidence            99999999999994 44444566668999999999999999999998764 455667999999999999887653    5


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHHhHHHhHhhhcccccCCcccchhHHhhhcCCCCchhHHHHH
Q 006663          311 TVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCKTAMSNVVMS  390 (636)
Q Consensus       311 ~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~n~eL~a~G~aNi~~slfGg~p~~~s~srS~~~~~~Ga~T~la~i~~~  390 (636)
                      .++.++++++++++|+++++|+++++++|++|.||||+|+|++|++||||+|+|++++++||++|.++|+|||+++++++
T Consensus       329 ~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~  408 (665)
T KOG0236|consen  329 VIPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSA  408 (665)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHHH
Confidence            66778889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh-cCCHHHHHHHhcCCcchhhHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 006663          391 FCMMLVLLFLAPLFSYTPLVALSAIIMSAMFG-LINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLR  469 (636)
Q Consensus       391 ~~~ll~~~~l~~ll~~IP~~vLa~ili~~~~~-li~~~~~~~l~~~~~~d~~v~~~t~~~~~~~~~~~Gi~~gv~~s~~~  469 (636)
                      +++++.+++++|++++||+|+||+++++++.+ +.+.++++.+||.+|.|+++|+.|++.+++.+++.|+++|++++++.
T Consensus       409 ~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~~  488 (665)
T KOG0236|consen  409 ALVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLFF  488 (665)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999 67999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccccccccccCCCccccccccccccCCCcEEEEEecCceeeechHHHHHHHH--HHHHhhh---cc-cCCCCC
Q 006663          470 TLIYVARPATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVL--RWIRDEQ---VL-SNSKPD  543 (636)
Q Consensus       470 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~ivrl~g~L~f~na~~~~~~l~--~~i~~~~---~~-~~~~~~  543 (636)
                      ++.|.+||+...++++++++.|++.++|++.++.++++|+|++++++|.|.+.+++++.  +.+++.+   +. ++...+
T Consensus       489 ii~~~~~p~~~~l~~~~~t~~~~~~~~y~~~~~~~gi~i~r~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  568 (665)
T KOG0236|consen  489 IILRSQRPRISLLGRIPRTNIYRDINQYRELKEIPGIKIFRISSPLLFGNVESFEKKLERLKYLRKEEVLENSARELHEN  568 (665)
T ss_pred             HHHHhcCcchhhhcccCCCccccchhhcchhhccCceEEEEeccceeeccHHHHHHHHHHHHhhhhcccccCcccccccC
Confidence            99999999999999999999999999999999999999999999999999999998773  4444321   11 111223


Q ss_pred             CceEEEEEccCCCccChHHHHHHHHHHHHHHhCCCEEEEEcCChhHHHHHHhcCCccccCCcccccCHHHHHHHHHHHhc
Q 006663          544 VIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACRFSLQ  623 (636)
Q Consensus       544 ~~~~vIlD~s~V~~iDssgl~~L~~l~~~~~~~g~~l~l~~~~~~v~~~l~~~gl~~~~~~~~if~t~~~Al~~~~~~~~  623 (636)
                      +.+.+|+||++++++|++|+.+|+++.+++++++++++++|+++++++.|++.++.+.++++++|.|++||++.++.++.
T Consensus       569 ~~~~vild~s~v~~iD~~g~~~L~~l~~~~~~~~i~~~~~n~~~~v~~~l~~~~~~~~~~~~~~f~tv~~av~~~~~~~~  648 (665)
T KOG0236|consen  569 SIHSVILDCSGVSFIDTSGASALKSLFKDLKTRGVQVLLANCPSSVREKLSKAGFFDFIGKDNLFLSVHDAVLDAVSELS  648 (665)
T ss_pred             cceEEEEECCccchhhHHHHHHHHHHHHHHHhcCcEEEEeCCCHHHHHHHHhhccccccchhhhhccHHHHHHHHHHhhh
Confidence            48999999999999999999999999999999999999999999999999999988999999999999999999999888


Q ss_pred             cccccCC
Q 006663          624 KEKHQND  630 (636)
Q Consensus       624 ~~~~~~~  630 (636)
                      ......|
T Consensus       649 ~~~~~~~  655 (665)
T KOG0236|consen  649 RGTDEEV  655 (665)
T ss_pred             ccccccc
Confidence            7666554

>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information
>COG5439 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK09928 choline transport protein BetT; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query636
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 1e-07
2kln_A130 Solution Structure Of Stas Domain Of Rv1739c From M 5e-06
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure 
Iteration: 1

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 477 PATCKLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQV 536
           P+   LG++ D+++Y+D + Y+  +  PGI I Q+ +PIY+AN +     + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKT----- 56
Query: 537 LSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILS 596
              +  + I  V+LD + V+ +D  G+     I++      I + L      V++ +  +
Sbjct: 57  -GVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTSN 115
Query: 597 KFIDVIG-KDSVFLSIEDAI 615
           +F +    K+ +F SI DA+
Sbjct: 116 RFFENPALKELLFHSIHDAV 135
>pdb|2KLN|A Chain A, Solution Structure Of Stas Domain Of Rv1739c From M. Tuberculosis Length = 130 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query636
2kln_A130 Probable sulphate-transport transmembrane protein; 2e-39
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 2e-38
4dgh_A130 Sulfate permease family protein; STAS domain, anio 5e-29
4dgf_A135 Sulfate transporter sulfate transporter family PR; 5e-26
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 1e-17
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 5e-08
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 2e-07
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 5e-07
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 1e-04
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
 Score =  140 bits (354), Expect = 2e-39
 Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 7/135 (5%)

Query: 493 DTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDL 552
           D + Y  A+  PG+++ +  +P+ FAN    R R L  +  +       P  +E  +L+ 
Sbjct: 3   DIDDYPQAKRVPGLVVYRYDAPLCFANAEDFRRRALTVVDQD-------PGQVEWFVLNA 55

Query: 553 SGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIE 612
                +D+T + A  ++   L  + I   +   +  + + +  +  +D IG+D +F+++ 
Sbjct: 56  ESNVEVDLTALDALDQLRTELLRRGIVFAMARVKQDLRESLRAASLLDKIGEDHIFMTLP 115

Query: 613 DAIDACRFSLQKEKH 627
            A+ A R       H
Sbjct: 116 TAVQAFRRRHHHHHH 130
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Length = 117 Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Length = 110 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Length = 121 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query636
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 99.98
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.91
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.87
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.86
2kln_A130 Probable sulphate-transport transmembrane protein; 99.86
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.76
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.68
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.66
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.64
4hyl_A117 Stage II sporulation protein; structural genomics, 99.64
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.63
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.62
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.52
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.52
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 95.87
3bl4_A124 Uncharacterized protein; structural genomics, join 92.51
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 88.99
2q3l_A126 Uncharacterized protein; SPOIIAA-like fold, struct 81.1
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=99.98  E-value=2.8e-30  Score=277.70  Aligned_cols=344  Identities=13%  Similarity=0.107  Sum_probs=259.9

Q ss_pred             hhhhhHHHHHHHHHHHhchHhHHHHHhCCCccchhhhhhhhhHhhhhccCCc-ccccchhH-HHHHHHHHHhhccCCCCC
Q 006663           64 LLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSK-HLAVGTVA-ACSLLIADTIGQKVPPKK  141 (636)
Q Consensus        64 ~l~~D~~aGlt~~~~~iPq~~aya~laglp~~~GL~s~~i~~lv~~~~G~s~-~~~~Gp~a-~~al~~~~~v~~~~~~~~  141 (636)
                      .+++++++|+...+.+..-.++--.+-|+||..+++++.++++++.+++++| +...|++. ..+.+.. +.. .     
T Consensus        13 ~~~~~i~~GlQh~lam~~~~v~~PlilGl~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~-i~~-~-----   85 (429)
T 3qe7_A           13 PLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLL-LLP-L-----   85 (429)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHH-HGG-G-----
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhHHHhCCCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHH-HHh-c-----
Confidence            4689999999988744333333333449999999999999999999986555 34468743 2333322 221 1     


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHh--hhh--hhhhccchhHHHHHhhHHHHHHHHhhhhhhhCccccCCCCcHHHHHH
Q 006663          142 DPTLYLHLVFTATFFTGIFQTALGFL--RLG--ILVDFLSHSTITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLH  217 (636)
Q Consensus       142 ~~~~~~~~~~~~~~l~Gv~~lllg~~--rlg--~l~~~ip~~Vi~Gf~~gigl~i~~~ql~~~~G~~~~~~~~~~~~~~~  217 (636)
                          .++.+.++.+++|++++++|++  |+|  ++.|++|+.|++.+++.+|+.++..+++...|...   ..       
T Consensus        86 ----g~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~---~~-------  151 (429)
T 3qe7_A           86 ----GYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA---EG-------  151 (429)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB---TT-------
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC---CC-------
Confidence                2677899999999999999998  775  89999999998889999999999999987543211   01       


Q ss_pred             HHHhhCCCCchHHHHHHHHHHHHHHHHHHhhhcCCcccccccchhhHHHHHHHHHHHHhhccccCeeeeccCC-CCCCCC
Q 006663          218 AVFSNRKEWRWESAVIGISFLIFLQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLR-KGINPP  296 (636)
Q Consensus       218 ~~~~~~~~~~~~~~~lg~~~l~~ll~~~~~~~~~~~~~~~~~~~~li~vi~~t~~~~~~~~~~~~v~~~g~ip-~g~p~~  296 (636)
                            +..++.++.++++++++++++.++.|++.+.     ++.|+++++++++++.++..+  .+.+++.| .++|.+
T Consensus       152 ------~~~~~~~~~la~~tl~iii~~~~~~kg~~~~-----~aiLigivvg~~~a~~~G~~d--~~~v~~a~~~~lP~~  218 (429)
T 3qe7_A          152 ------QTPDSKTIIISITTLAVTVLGSVLFRGFLAI-----IPILIGVLVGYALSFAMGIVD--TTPIINAHWFALPTL  218 (429)
T ss_dssp             ------BCCCHHHHHHHHHHHHHHHHHHHSSSTTTTT-----HHHHHHHHHHHHHHHHHHHTT--SSHHHHSCSSCCCCC
T ss_pred             ------ccccHHHHHHHHHHHHHHHHHHHHhcccchh-----hHHHHHHHHHHHHHHHhcCCC--cccccccccccccCC
Confidence                  1246778899999999988887666655432     378999999999999988632  22233333 345544


Q ss_pred             CCCcCccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc----ccCchhHHHHHhHHHhHhhhcccccCCcccchh
Q 006663          297 SIGYLNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNE----QIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKT  372 (636)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~----~~~~n~eL~a~G~aNi~~slfGg~p~~~s~srS  372 (636)
                      ..|  +|++.    .+...+.++++.++|+++..++.++..++    +.+.|||+.++|++|+++|+||++|.|++..++
T Consensus       219 ~~P--~f~~~----~i~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~  292 (429)
T 3qe7_A          219 YTP--RFEWF----AILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENI  292 (429)
T ss_dssp             CCC--CCCHH----HHHHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHH
T ss_pred             CCC--cccHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhH
Confidence            444  45543    33344667889999999998888877664    447899999999999999999999999877777


Q ss_pred             HHhhhcCCCCchhHHHHHHHHHHHHHH--HHHHhhhhhHHHHHHHHHHHHhhcCCHHHHHHH--hcCCcc---hhhHHHH
Q 006663          373 AVNFNAGCKTAMSNVVMSFCMMLVLLF--LAPLFSYTPLVALSAIIMSAMFGLINYEEAILL--FKVDKL---DFSICMA  445 (636)
Q Consensus       373 ~~~~~~Ga~T~la~i~~~~~~ll~~~~--l~~ll~~IP~~vLa~ili~~~~~li~~~~~~~l--~~~~~~---d~~v~~~  445 (636)
                      +++..+|++||++.+++|++++++.++  ++++++.||.+++||+.+ +.++++...+++.+  .|.+..   +..+..+
T Consensus       293 g~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l-~lfg~i~~~Gi~~l~~~~v~~~~~rn~~i~~~  371 (429)
T 3qe7_A          293 GVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSL-LLYGVIGASGIRVLIESKVDYNKAQNLILTSV  371 (429)
T ss_dssp             HHHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHH-HHHHHHHHHHHHHHHHTTSCTTSHHHHHHHHH
T ss_pred             HHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcchhHHHHH
Confidence            888899999999999999998877654  678999999999999776 69999989999888  777743   4444444


Q ss_pred             HHH
Q 006663          446 AFL  448 (636)
Q Consensus       446 t~~  448 (636)
                      ++.
T Consensus       372 ~l~  374 (429)
T 3qe7_A          372 ILI  374 (429)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 636
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 6e-14
d1h4xa_111 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 1e-09
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 66.4 bits (162), Expect = 6e-14
 Identities = 18/114 (15%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 505 GILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIA 564
            +LI++L   +       +RE+V   + +  +          H++L+L  ++ +D +G+ 
Sbjct: 11  DVLIVRLSGELDHHTAEELREQVTDVLENRAI---------RHIVLNLGQLTFMDSSGLG 61

Query: 565 AFREILRILEAKSIKMKLINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDAC 618
                 + ++    +M +      V     +S    +I    V    + A+ A 
Sbjct: 62  VILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKII---RVEADEQFALQAL 112
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query636
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.69
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.69
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.68
d2csua3163 Acetate-CoA ligase alpha chain, AcdA, domains 2 an 81.19
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.69  E-value=1.4e-17  Score=144.61  Aligned_cols=106  Identities=18%  Similarity=0.242  Sum_probs=98.7

Q ss_pred             CCCcEEEEEecCceeeechHHHHHHHHHHHHhhhcccCCCCCCceEEEEEccCCCccChHHHHHHHHHHHHHHhCCCEEE
Q 006663          502 GFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNSKPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMK  581 (636)
Q Consensus       502 ~~~~v~ivrl~g~L~f~na~~~~~~l~~~i~~~~~~~~~~~~~~~~vIlD~s~V~~iDssgl~~L~~l~~~~~~~g~~l~  581 (636)
                      ..+++.+++++|+|+|.|++.+++++.+.+++         ++.+++|+||++|++||++|+++|.++.+.++++|+++.
T Consensus         8 ~~~~v~vv~l~G~L~~~~~~~~~~~l~~~~~~---------~~~~~iilDls~v~~iDssg~~~L~~~~~~~~~~g~~l~   78 (115)
T d1th8b_           8 VKQDVLIVRLSGELDHHTAEELREQVTDVLEN---------RAIRHIVLNLGQLTFMDSSGLGVILGRYKQIKNVGGQMV   78 (115)
T ss_dssp             EETTEEEEEEEEEESHHHHHHHHHHHHHHHHS---------SCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EECCEEEEEEEEEEEHHHHHHHHHHHHHHHhc---------CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence            34679999999999999999999999987764         357899999999999999999999999999999999999


Q ss_pred             EEcCChhHHHHHHhcCCccccCCcccccCHHHHHHHHH
Q 006663          582 LINPRIGVMDKMILSKFIDVIGKDSVFLSIEDAIDACR  619 (636)
Q Consensus       582 l~~~~~~v~~~l~~~gl~~~~~~~~if~t~~~Al~~~~  619 (636)
                      ++|+++++++.|+++|+++.+   ++|+|.++|++.+.
T Consensus        79 l~~~~~~v~~~l~~~gl~~~~---~i~~~~~~Al~~l~  113 (115)
T d1th8b_          79 VCAVSPAVKRLFDMSGLFKII---RVEADEQFALQALG  113 (115)
T ss_dssp             EESCCHHHHHHHHHHTGGGTS---EEESSHHHHHHHTT
T ss_pred             EEECCHHHHHHHHHcCCCcee---EEeCCHHHHHHHhc
Confidence            999999999999999999999   79999999998753
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure