Citrus Sinensis ID: 006673

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630------

MASSKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS

ccccccccccccccccccHHHHHcccccccHHHHHHHcccccccHHccccccccccHHHHHHHcccccccEEEEEEcccccccccccHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccHHHHHHHHHHHHcccccccccccHHHHHcccccccccccEEEEEEcccccccccccEEcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHccEEEEEccccccEEEcccccHHHHHHHHHHHccccccccccccEEEEccccccHHHccccHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccEEEEEEEHHHHHHccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccEEcHHHHHHHHHHHHccccccccEEEcccccccccccccccccccEEEccEEEEEccccEEEEEccccccccccccccccccccccccccEEEccc

ccccccccccccccccccccccccccccccHHHHHHcccccHHHEEEcccccEEEccHHHHHHccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHHccccccEEccEEEEcHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccEcccHHHHHHHHHHccccccHHHccHHHHHHHHHccEcHHHccccEEEccccHHHccEEEccccccccccEEEcEEEHHHcHHHHHHHHcccHHHHHHHHHccEEEEEccccEEEcHHHccHHHHHHHcccccccEEEEEccccEEEEcccccccccccEccHHHHHHHHHHcccccEEEEEEccccccHHHHHHHcHHHHHcccccEEEEEEcHHHHHHcccccHccccccccHHHHHccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccEEEEcccEEEcccEEEEEcccccccccccccccHHHccEEcccccEEEccc

massktvrklqvvspvpadidiansveplhISEIAQelnlkpnhydlyGKYKAKVLLSVLDELEGSADGYYVVVGgitptplgegksttTVGLCQALGAFLDKKVVtclrqpsqgptfgikggaagggysqvipmdefnlhltgDIHAITAANNLLAAAIDTRIFHEASQSDKAlfnrlcppnkegersFSNIMFRRLKklgisktkpedltpeEINRFarldidpasitWRRVMDVNDRFLRKItigqgpeekgmvretgFDISVASEIMAVLALTTSLADMRERLGKMvignskagdpitaddlgvgGALTVLMKDainptlmqtlegtpvlvhagpfaniahgnssIVADKIALklvgpggfvvteagfgadigaEKFMNIkcrysgltpqCAVIVATIRALKmhgggpqvvagkpldhaylNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCshhahggkgaVDLGIAVQRACEnvtqplkflypldVSIKEKIDTIARSYgasgveysEEAEKQIEMYtgqgfsglpicmaktqysfshnaaekgaptgfilpirdvrasigagfiyplvgtmstmpglptrpcfyeidvdtatgkvvgls

massktvrklqvvspvpadidiaNSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKalfnrlcppnkegersfsnIMFRRLKklgisktkpedltpeeinrfarldidpasitwrrvmdvnDRFLRKitigqgpeekgmvRETGFDISVASEIMAVLALTTSLADMRERLGKMvignskagdpitaDDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS

MASSKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKggaagggYSQVIPMDEFNLHLTGDIHaitaannllaaaidtRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKaelnavrnaamaagafdaVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS

***********VVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQ*DKALFNRLC***********NIMFRRLKKLG************EINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKV****

***********VVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGL*

**********QVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS

****KTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKV****

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		636	2.2.26 [Sep-21-2011]
P28723		637	Formate--tetrahydrofolate	N/A	no	0.996	0.995	0.883	0.0
Q9SPK5		634	Formate--tetrahydrofolate	yes	no	0.995	0.998	0.884	0.0
P27653		935	C-1-tetrahydrofolate synt	yes	no	0.982	0.668	0.671	0.0
P11586		935	C-1-tetrahydrofolate synt	yes	no	0.981	0.667	0.682	0.0
Q922D8		935	C-1-tetrahydrofolate synt	yes	no	0.982	0.668	0.679	0.0
Q5R8P0		935	C-1-tetrahydrofolate synt	yes	no	0.981	0.667	0.677	0.0
Q6UB35		978	Monofunctional C1-tetrahy	no	no	0.982	0.639	0.667	0.0
Q0VCR7		975	Monofunctional C1-tetrahy	no	no	0.982	0.641	0.660	0.0
Q3V3R1		977	Monofunctional C1-tetrahy	no	no	0.982	0.639	0.659	0.0
Q8WZJ7		937	C-1-tetrahydrofolate synt	yes	no	0.987	0.670	0.613	0.0

>sp\|P28723\|FTHS_SPIOL Formate--tetrahydrofolate ligase OS=Spinacia oleracea PE=1 SV=3	Back alignment and function desciption

 Score = 1173 bits (3035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/634 (88%), Positives = 610/634 (96%)

Query: 3   SSKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDE 62
           SSKTVRKL+V +PVPADIDIAN+VEPLHI++IA +LNL P HYDLYGKYKAKVLLSVLDE
Sbjct: 4   SSKTVRKLEVATPVPADIDIANAVEPLHIADIAADLNLSPRHYDLYGKYKAKVLLSVLDE 63

Query: 63  LEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKG 122
           ++ + DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKG
Sbjct: 64  VQETQDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKG 123

Query: 123 GAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPP 182
           GAAGGGYSQVIPMDEFNLHLTGDIHAITA+NNLLAAAIDTR+FHE++QSDKALFNRLCPP
Sbjct: 124 GAAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRMFHESTQSDKALFNRLCPP 183

Query: 183 NKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFL 242
           NKEG+R+F NIM RRLKKLGI KT P+DLTPEE+ +FARLDIDP SITWRRVMDVNDRFL
Sbjct: 184 NKEGKRTFCNIMHRRLKKLGIDKTNPDDLTPEEVTKFARLDIDPDSITWRRVMDVNDRFL 243

Query: 243 RKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPIT 302
           RKI++GQGP+EKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAG+PIT
Sbjct: 244 RKISVGQGPDEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGEPIT 303

Query: 303 ADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGP 362
           ADDLG+GGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGP
Sbjct: 304 ADDLGLGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGP 363

Query: 363 GGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDH 422
           GGFVVTEAGFG+DIG EKFMNIKCRYSGLTPQCA++VAT+RALKMHGGGPQVVAGKPLD 
Sbjct: 364 GGFVVTEAGFGSDIGTEKFMNIKCRYSGLTPQCAIVVATVRALKMHGGGPQVVAGKPLDR 423

Query: 423 AYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFD 482
           AYL ENV LVEAGCVNLARHI NTKAYG+NVVVA+NMF++D++AELNAV+ AAM AGAFD
Sbjct: 424 AYLTENVGLVEAGCVNLARHIINTKAYGSNVVVAINMFSSDTEAELNAVKKAAMDAGAFD 483

Query: 483 AVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEY 542
           AV+C+HHAHGGKGAVDLGIAVQ+ACENVTQPL+FLYPLD+SIKEKI+ IA+SYGA+GVEY
Sbjct: 484 AVICTHHAHGGKGAVDLGIAVQKACENVTQPLRFLYPLDISIKEKIEAIAKSYGAAGVEY 543

Query: 543 SEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIY 602
           SE+AEK+IEMY+ QGFS LPICMAKTQYSFSHNAAEKGAP+GFILPIRDVR SIGAGFIY
Sbjct: 544 SEQAEKKIEMYSKQGFSNLPICMAKTQYSFSHNAAEKGAPSGFILPIRDVRGSIGAGFIY 603

Query: 603 PLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS 636
           PLVGTMSTMPGLPTRPCF++ID+DT TGKV+GLS
Sbjct: 604 PLVGTMSTMPGLPTRPCFFDIDLDTTTGKVIGLS 637

Spinacia oleracea (taxid: 3562)
EC: 6EC: .EC: 3EC: .EC: 4EC: .EC: 3

>sp\|Q9SPK5\|FTHS_ARATH Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=1 SV=1	Back alignment and function description

>sp\|P27653\|C1TC_RAT C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus GN=Mthfd1 PE=1 SV=3	Back alignment and function description

>sp\|P11586\|C1TC_HUMAN C-1-tetrahydrofolate synthase, cytoplasmic OS=Homo sapiens GN=MTHFD1 PE=1 SV=3	Back alignment and function description

>sp\|Q922D8\|C1TC_MOUSE C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus GN=Mthfd1 PE=1 SV=4	Back alignment and function description

>sp\|Q5R8P0\|C1TC_PONAB C-1-tetrahydrofolate synthase, cytoplasmic OS=Pongo abelii GN=MTHFD1 PE=2 SV=3	Back alignment and function description

>sp\|Q6UB35\|C1TM_HUMAN Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Homo sapiens GN=MTHFD1L PE=1 SV=1	Back alignment and function description

>sp\|Q0VCR7\|C1TM_BOVIN Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Bos taurus GN=MTHFD1L PE=2 SV=2	Back alignment and function description

>sp\|Q3V3R1\|C1TM_MOUSE Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus GN=Mthfd1l PE=1 SV=2	Back alignment and function description

>sp\|Q8WZJ7\|C1TC_SCHPO C-1-tetrahydrofolate synthase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC839.16 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		636
224052994		636	10-formyltetrahydrofolate synthetase [Po	1.0	1.0	0.913	0.0
225435632		637	PREDICTED: formate--tetrahydrofolate lig	0.996	0.995	0.917	0.0
297847394		634	10-formyltetrahydrofolate synthetase [Ar	0.995	0.998	0.889	0.0
2507455		637	RecName: Full=Formate--tetrahydrofolate	0.996	0.995	0.883	0.0
224073194		636	10-formyltetrahydrofolate synthetase [Po	1.0	1.0	0.916	0.0
18403095		634	Formate--tetrahydrofolate ligase [Arabid	0.995	0.998	0.884	0.0
449462581		636	PREDICTED: formate--tetrahydrofolate lig	1.0	1.0	0.919	0.0
356576871		636	PREDICTED: formate--tetrahydrofolate lig	1.0	1.0	0.902	0.0
356536528		636	PREDICTED: formate--tetrahydrofolate lig	1.0	1.0	0.896	0.0
357445035		743	Formate-tetrahydrofolate ligase [Medicag	0.988	0.846	0.830	0.0

>gi\|224052994\|ref\|XP_002297654.1\| 10-formyltetrahydrofolate synthetase [Populus trichocarpa] gi\|222844912\|gb\|EEE82459.1\| 10-formyltetrahydrofolate synthetase [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1185 bits (3066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/636 (91%), Positives = 617/636 (97%)

Query: 1   MASSKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVL 60
           M++SKT+RKL+VVSPVPADIDIANSVEP HISEIA+ELNL P HYDLYGKYKAKVLL VL
Sbjct: 1   MSASKTLRKLEVVSPVPADIDIANSVEPFHISEIAKELNLSPKHYDLYGKYKAKVLLPVL 60

Query: 61  DELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGI 120
           DELEGS DGYYVVVGGITPTPLGEGKSTTTVGLCQA+GAFLDKKV TCLRQPSQGPTFGI
Sbjct: 61  DELEGSGDGYYVVVGGITPTPLGEGKSTTTVGLCQAMGAFLDKKVATCLRQPSQGPTFGI 120

Query: 121 KGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLC 180
           KGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHE++QSDKAL NRLC
Sbjct: 121 KGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALLNRLC 180

Query: 181 PPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDR 240
           PPNKEG+RSFS+IMFRRLK+LGISKTKPE+LTP+E+ +FARLDIDPASITWRRVMDVNDR
Sbjct: 181 PPNKEGKRSFSDIMFRRLKRLGISKTKPEELTPQEVKKFARLDIDPASITWRRVMDVNDR 240

Query: 241 FLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDP 300
           FLRKIT+GQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDP
Sbjct: 241 FLRKITVGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDP 300

Query: 301 ITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLV 360
           +TADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLV
Sbjct: 301 VTADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLV 360

Query: 361 GPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPL 420
           GPGGFVVTEAGFG+DIG EKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGP+VVAGKPL
Sbjct: 361 GPGGFVVTEAGFGSDIGTEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPEVVAGKPL 420

Query: 421 DHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGA 480
           D AY  ENV+LVEAGCVNLARHI+NTKAYG NVVVAVNMFATDS+AELNAVRNAA+ AGA
Sbjct: 421 DRAYTTENVSLVEAGCVNLARHISNTKAYGVNVVVAVNMFATDSEAELNAVRNAALTAGA 480

Query: 481 FDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGV 540
           +DAVVC+HHAHGGKGAV+LGIAVQ+AC NVTQPLKFLY LD+SIKEKI+ IARSYGASGV
Sbjct: 481 YDAVVCTHHAHGGKGAVELGIAVQKACGNVTQPLKFLYSLDISIKEKIEAIARSYGASGV 540

Query: 541 EYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGF 600
           EYSE+AEKQIEMY+ QGFSGLPICMAKTQYSFSH A+EKGAPTGF+LPIRDVRASIGAGF
Sbjct: 541 EYSEQAEKQIEMYSRQGFSGLPICMAKTQYSFSHQASEKGAPTGFVLPIRDVRASIGAGF 600

Query: 601 IYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS 636
           IYPLVGTMSTMPGLPTRPCFY+ID+DTATGKV+GLS
Sbjct: 601 IYPLVGTMSTMPGLPTRPCFYDIDLDTATGKVIGLS 636

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225435632\|ref\|XP_002285654.1\| PREDICTED: formate--tetrahydrofolate ligase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297847394\|ref\|XP_002891578.1\| 10-formyltetrahydrofolate synthetase [Arabidopsis lyrata subsp. lyrata] gi\|297337420\|gb\|EFH67837.1\| 10-formyltetrahydrofolate synthetase [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|2507455\|sp\|P28723.3\|FTHS_SPIOL RecName: Full=Formate--tetrahydrofolate ligase; AltName: Full=10-formyletrahydrofolate synthetase; Short=FHS; Short=FTHFS; AltName: Full=Formyltetrahydrofolate synthetase gi\|170145\|gb\|AAA34046.1\| 10-formyltetrahydrofolate synthetase [Spinacia oleracea]	Back alignment and taxonomy information

>gi\|224073194\|ref\|XP_002304017.1\| 10-formyltetrahydrofolate synthetase [Populus trichocarpa] gi\|222841449\|gb\|EEE78996.1\| 10-formyltetrahydrofolate synthetase [Populus trichocarpa]	Back alignment and taxonomy information

>gi|18403095|ref|NP_564571.1| Formate--tetrahydrofolate ligase [Arabidopsis thaliana] gi|68052257|sp|Q9SPK5.1|FTHS_ARATH RecName: Full=Formate--tetrahydrofolate ligase; AltName: Full=10-formyletrahydrofolate synthetase; Short=FHS; Short=FTHFS; AltName: Full=Formyltetrahydrofolate synthetase gi|5921663|gb|AAD56290.1|AF162279_1 10-formyltetrahydrofolate synthetase [Arabidopsis thaliana] gi|9454559|gb|AAF87882.1|AC012561_15 10-formyltetrahydrofolate synthetase [Arabidopsis thaliana] gi|12322329|gb|AAG51185.1|AC079279_6 10-formyltetrahydrofolate synthetase [Arabidopsis thaliana] gi|15451114|gb|AAK96828.1| 10-formyltetrahydrofolate synthetase [Arabidopsis thaliana] gi|20148441|gb|AAM10111.1| 10-formyltetrahydrofolate synthetase [Arabidopsis thaliana] gi|332194434|gb|AEE32555.1| Formate--tetrahydrofolate ligase [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|449462581\|ref\|XP_004149019.1\| PREDICTED: formate--tetrahydrofolate ligase-like [Cucumis sativus] gi\|449502199\|ref\|XP_004161571.1\| PREDICTED: formate--tetrahydrofolate ligase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356576871\|ref\|XP_003556553.1\| PREDICTED: formate--tetrahydrofolate ligase-like [Glycine max]	Back alignment and taxonomy information

>gi\|356536528\|ref\|XP_003536789.1\| PREDICTED: formate--tetrahydrofolate ligase-like [Glycine max]	Back alignment and taxonomy information

>gi\|357445035\|ref\|XP_003592795.1\| Formate-tetrahydrofolate ligase [Medicago truncatula] gi\|355481843\|gb\|AES63046.1\| Formate-tetrahydrofolate ligase [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		636
TAIR\|locus:2008101		634	THFS "10-formyltetrahydrofolat	0.995	0.998	0.829	3.5e-288
DICTYBASE\|DDB_G0290397		638	fthS "formyltetrahydrofolate s	0.987	0.984	0.659	1.1e-220
UNIPROTKB\|G3V2B8		935	MTHFD1 "C-1-tetrahydrofolate s	0.981	0.667	0.639	7.5e-208
UNIPROTKB\|P11586		935	MTHFD1 "C-1-tetrahydrofolate s	0.981	0.667	0.639	7.5e-208
UNIPROTKB\|F1SA74		930	MTHFD1 "Uncharacterized protei	0.982	0.672	0.636	6.7e-207
MGI\|MGI:1342005		935	Mthfd1 "methylenetetrahydrofol	0.982	0.668	0.633	9.8e-206
UNIPROTKB\|A4FUD0		935	MTHFD1 "MTHFD1 protein" [Bos t	0.982	0.668	0.628	5.4e-205
UNIPROTKB\|E2R2W7		935	MTHFD1 "Uncharacterized protei	0.981	0.667	0.628	8.8e-205
RGD\|708531		935	Mthfd1 "methylenetetrahydrofol	0.982	0.668	0.628	1.4e-204
UNIPROTKB\|F1LW12		927	Mthfd1 "C-1-tetrahydrofolate s	0.982	0.674	0.628	1.4e-204

TAIR\|locus:2008101 THFS "10-formyltetrahydrofolate synthetase" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2768 (979.4 bits), Expect = 3.5e-288, P = 3.5e-288
 Identities = 525/633 (82%), Positives = 567/633 (89%)

Query:     4 SKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDEL 63
             S + RKL+VVSPVPADIDIANSVEPLHISEIA++LN+ P HYDLYGKYKAKVLLS  DEL
Sbjct:     2 SSSTRKLEVVSPVPADIDIANSVEPLHISEIAKDLNINPLHYDLYGKYKAKVLLSAFDEL 61

Query:    64 EGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXX 123
             +G  DGYYVVVGGITPTPLGEGKSTTTVGLCQALGA+LDKKVVTCLRQPSQGPTFGIK  
Sbjct:    62 QGQEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCLRQPSQGPTFGIKGG 121

Query:   124 XXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPN 183
                  YSQVIPMDEFNLHLTGDIH               RIFHE SQSDKALFNRLCPPN
Sbjct:   122 AAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRIFHETSQSDKALFNRLCPPN 181

Query:   184 KEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLR 243
             KEG+RSFS+IMFRRL KLGISKT PE+LTPEEI +FARLDIDPASITWRRVMDVNDRFLR
Sbjct:   182 KEGKRSFSDIMFRRLTKLGISKTSPEELTPEEIKKFARLDIDPASITWRRVMDVNDRFLR 241

Query:   244 KITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITA 303
             KITIGQGPEEKGM RETGFDISVASEIMAVLALTTSL DMRERLGKMVIGNSKAGDPITA
Sbjct:   242 KITIGQGPEEKGMTRETGFDISVASEIMAVLALTTSLGDMRERLGKMVIGNSKAGDPITA 301

Query:   304 DDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPG 363
             DDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPG
Sbjct:   302 DDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPG 361

Query:   364 GFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHA 423
             GFVVTEAGFG+DIG EKFMNIKCRYSGLTPQCA++VAT+RALKMHGGGP VVAG+PLD A
Sbjct:   362 GFVVTEAGFGSDIGTEKFMNIKCRYSGLTPQCAIVVATVRALKMHGGGPDVVAGRPLDRA 421

Query:   424 YLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKXXXXXXXXXXXXXXXXXX 483
             Y++ENV+LVEAGCVNLA+HI+NTKAYG NV+VAVNMFATD++                  
Sbjct:   422 YVSENVSLVEAGCVNLAKHISNTKAYGVNVIVAVNMFATDTEAELNAVRKFSMDAGAFDA 481

Query:   484 VVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARSYGASGVEYS 543
             VVCSHHAH GKGAVDLGIAV++AC+N+TQPL+FLYPLD+ IK+KI+ IA+SYGASGVEYS
Sbjct:   482 VVCSHHAHSGKGAVDLGIAVEKACQNITQPLRFLYPLDIGIKDKIEAIAKSYGASGVEYS 541

Query:   544 EEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYP 603
             ++AEKQIEMYT QGFS LPICM+KTQYSFSH+A++KGAP+GF+LPIRDVR SIGAGFIYP
Sbjct:   542 DQAEKQIEMYTQQGFSNLPICMSKTQYSFSHDASKKGAPSGFVLPIRDVRGSIGAGFIYP 601

Query:   604 LVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS 636
             LVGTMSTMPGLPTRPCFYEID+DT TGKV GLS
Sbjct:   602 LVGTMSTMPGLPTRPCFYEIDIDTETGKVRGLS 634

GO:0004329 "formate-tetrahydrofolate ligase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA;ISS

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005507 "copper ion binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

DICTYBASE\|DDB_G0290397 fthS "formyltetrahydrofolate synthetase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V2B8 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|P11586 MTHFD1 "C-1-tetrahydrofolate synthase, cytoplasmic" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SA74 MTHFD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

MGI\|MGI:1342005 Mthfd1 "methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|A4FUD0 MTHFD1 "MTHFD1 protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R2W7 MTHFD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

RGD\|708531 Mthfd1 "methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1LW12 Mthfd1 "C-1-tetrahydrofolate synthase, cytoplasmic" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
C0QAX9	FTHS_DESAH	6, ., 3, ., 4, ., 3	0.4600	0.9025	0.9712	yes	no
Q1AXZ4	FTHS1_RUBXD	6, ., 3, ., 4, ., 3	0.4777	0.8805	0.9722	yes	no
B8ECE1	FTHS_SHEB2	6, ., 3, ., 4, ., 3	0.4766	0.8993	0.9862	yes	no
A6WSY9	FTHS_SHEB8	6, ., 3, ., 4, ., 3	0.4712	0.8993	0.9777	yes	no
Q922D8	C1TC_MOUSE	6, ., 3, ., 4, ., 3	0.6799	0.9827	0.6684	yes	no
Q3ZX40	FTHS_DEHSC	6, ., 3, ., 4, ., 3	0.4688	0.9261	0.9865	yes	no
B5FG96	FTHS_VIBFM	6, ., 3, ., 4, ., 3	0.4599	0.9040	0.9879	yes	no
A4YAP3	FTHS_SHEPC	6, ., 3, ., 4, ., 3	0.4724	0.8883	0.9912	yes	no
Q1AT39	FTHS3_RUBXD	6, ., 3, ., 4, ., 3	0.4784	0.8789	0.9755	yes	no
A4J0S6	FTHS_DESRM	6, ., 3, ., 4, ., 3	0.4991	0.8836	0.9911	yes	no
Q5R8P0	C1TC_PONAB	6, ., 3, ., 4, ., 3	0.6778	0.9811	0.6673	yes	no
A9L3Z6	FTHS_SHEB9	6, ., 3, ., 4, ., 3	0.4728	0.8993	0.9777	yes	no
A3CZY6	FTHS_SHEB5	6, ., 3, ., 4, ., 3	0.4760	0.8993	0.9777	yes	no
Q5E3V8	FTHS_VIBF1	6, ., 3, ., 4, ., 3	0.4615	0.9040	0.9879	yes	no
Q0HMS6	FTHS_SHESM	6, ., 3, ., 4, ., 3	0.4741	0.8852	0.9877	yes	no
A8FQV1	FTHS_SHESH	6, ., 3, ., 4, ., 3	0.4612	0.8883	0.9912	yes	no
A8MIN1	FTHS_ALKOO	6, ., 3, ., 4, ., 3	0.4514	0.8663	0.9910	yes	no
P21164	FTHS_MOOTH	6, ., 3, ., 4, ., 3	0.4679	0.8757	0.9964	yes	no
B7VSJ2	FTHS_VIBSL	6, ., 3, ., 4, ., 3	0.4775	0.9040	0.9879	yes	no
A5UPV2	FTHS_ROSS1	6, ., 3, ., 4, ., 3	0.5032	0.8789	0.9911	yes	no
Q6ABS5	FTHS_PROAC	6, ., 3, ., 4, ., 3	0.4523	0.8789	0.9928	yes	no
A7NGQ9	FTHS_ROSCS	6, ., 3, ., 4, ., 3	0.4919	0.8789	0.9911	yes	no
Q0HR05	FTHS_SHESR	6, ., 3, ., 4, ., 3	0.4741	0.8836	0.9876	yes	no
B1KJC0	FTHS_SHEWM	6, ., 3, ., 4, ., 3	0.4620	0.8899	0.9929	yes	no
P11586	C1TC_HUMAN	6, ., 3, ., 4, ., 3	0.6826	0.9811	0.6673	yes	no
A1RFN3	FTHS_SHESW	6, ., 3, ., 4, ., 3	0.4724	0.8883	0.9912	yes	no
P28723	FTHS_SPIOL	6, ., 3, ., 4, ., 3	0.8832	0.9968	0.9952	N/A	no
Q3Z8K3	FTHS_DEHE1	6, ., 3, ., 4, ., 3	0.4859	0.8757	0.9329	yes	no
Q8WZJ7	C1TC_SCHPO	6, ., 3, ., 4, ., 3	0.6131	0.9874	0.6702	yes	no
Q3A9K2	FTHS_CARHZ	6, ., 3, ., 4, ., 3	0.4717	0.8679	0.9928	yes	no
P07245	C1TC_YEAST	6, ., 3, ., 4, ., 3	0.5707	0.9638	0.6479	yes	no
Q8EJA7	FTHS_SHEON	6, ., 3, ., 4, ., 3	0.4627	0.8883	0.9912	yes	no
A7N5E9	FTHS_VIBHB	6, ., 3, ., 4, ., 3	0.4583	0.9040	0.9879	yes	no
A4FL80	FTHS_SACEN	6, ., 3, ., 4, ., 3	0.4951	0.8836	0.9946	yes	no
Q1AVP8	FTHS2_RUBXD	6, ., 3, ., 4, ., 3	0.4777	0.8805	0.9722	yes	no
A9B4H8	FTHS_HERA2	6, ., 3, ., 4, ., 3	0.4670	0.8773	0.9789	yes	no
O96553	C1TC_DROME	6, ., 3, ., 4, ., 3	0.5885	0.9811	0.6446	yes	no
Q9SPK5	FTHS_ARATH	6, ., 3, ., 4, ., 3	0.8846	0.9952	0.9984	yes	no
P27653	C1TC_RAT	6, ., 3, ., 4, ., 3	0.6719	0.9827	0.6684	yes	no
A3QA17	FTHS_SHELP	6, ., 3, ., 4, ., 3	0.4636	0.8805	0.9929	yes	no
Q2RM91	FTHS_MOOTA	6, ., 3, ., 4, ., 3	0.4727	0.8757	0.9964	yes	no
A0KSN0	FTHS_SHESA	6, ., 3, ., 4, ., 3	0.4677	0.8852	0.9877	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.4.3	0.994
3rd Layer	3.5.4	0.921
3rd Layer	1.5.1	0.921
4th Layer	1.5.1.5	0.914
3rd Layer	6.3.4	0.998
3rd Layer	3.5.4.9	0.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		636
PLN02759		637	PLN02759, PLN02759, Formate--tetrahydrofolate liga	0.0
PTZ00386		625	PTZ00386, PTZ00386, formyl tetrahydrofolate synthe	0.0
pfam01268		557	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	0.0
cd00477		524	cd00477, FTHFS, Formyltetrahydrofolate synthetase	0.0
COG2759		554	COG2759, MIS1, Formyltetrahydrofolate synthetase [	0.0
PRK13505		557	PRK13505, PRK13505, formate--tetrahydrofolate liga	0.0
PRK13506		578	PRK13506, PRK13506, formate--tetrahydrofolate liga	0.0
PRK13507		587	PRK13507, PRK13507, formate--tetrahydrofolate liga	0.0

>gnl\|CDD\|178359 PLN02759, PLN02759, Formate--tetrahydrofolate ligase	Back alignment and domain information

 Score = 1275 bits (3301), Expect = 0.0
 Identities = 550/637 (86%), Positives = 593/637 (93%), Gaps = 1/637 (0%)

Query: 1   MASSKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVL 60
           M  S + RKL+V SPVPADIDIA SVEPLHISEIA+ L L P+ YDLYGKYKAKVLLSV 
Sbjct: 1   MTMSSSRRKLEVKSPVPADIDIAQSVEPLHISEIAKALGLLPDEYDLYGKYKAKVLLSVR 60

Query: 61  DELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGI 120
           D L G+ DGYYVVV GITPTPLGEGKSTTT+GLCQALGA+LDKKVVTCLRQPSQGPTFGI
Sbjct: 61  DRLAGAPDGYYVVVAGITPTPLGEGKSTTTIGLCQALGAYLDKKVVTCLRQPSQGPTFGI 120

Query: 121 KGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLC 180
           KGGAAGGGYSQVIPM+EFNLHLTGDIHAITAANNLLAAAIDTR+FHEA+QSDKALFNRLC
Sbjct: 121 KGGAAGGGYSQVIPMEEFNLHLTGDIHAITAANNLLAAAIDTRVFHEATQSDKALFNRLC 180

Query: 181 PPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDR 240
           P NKEG+RSF+ +MFRRLKKLGISKT P++LTPEE  +FARLDIDPASITWRRVMDVNDR
Sbjct: 181 PANKEGKRSFAAVMFRRLKKLGISKTDPDELTPEERKKFARLDIDPASITWRRVMDVNDR 240

Query: 241 FLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDP 300
           FLRKIT+GQGPEEKGM RETGFDI+VASEIMAVLALTTSLADMRERLGKMVIGNSKAG+P
Sbjct: 241 FLRKITVGQGPEEKGMTRETGFDITVASEIMAVLALTTSLADMRERLGKMVIGNSKAGEP 300

Query: 301 ITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLV 360
           +TADDLGVGGALTVLMKDAI+PTLMQTLEGTPVLVHAGPFANIAHGNSSIVAD+IALKLV
Sbjct: 301 VTADDLGVGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADQIALKLV 360

Query: 361 GPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPL 420
           GPGGFVVTEAGFGADIG EKFMNIKCRYSGL PQCAVIVAT+RALKMHGGGP VVAGKPL
Sbjct: 361 GPGGFVVTEAGFGADIGTEKFMNIKCRYSGLKPQCAVIVATVRALKMHGGGPAVVAGKPL 420

Query: 421 DHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGA 480
           DHAY  ENV LVEAGCVNLARHI NTK+YG NVVVA+NMFATD++AEL AVR AA+AAGA
Sbjct: 421 DHAYTTENVELVEAGCVNLARHIENTKSYGVNVVVAINMFATDTEAELEAVRQAALAAGA 480

Query: 481 FDAVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIAR-SYGASG 539
           FDAV+C+HHAHGGKGAVDLG AVQ+ACE  +QP KFLYPLD+SIKEKI+ IA+ SYGA G
Sbjct: 481 FDAVLCTHHAHGGKGAVDLGEAVQKACEGNSQPFKFLYPLDISIKEKIEAIAKESYGADG 540

Query: 540 VEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAG 599
           VEYSE+AE QIEMYT QGFS LPICMAKTQYSFSH+A+ KGAP+GF LPIRDVRAS+GAG
Sbjct: 541 VEYSEQAEAQIEMYTRQGFSNLPICMAKTQYSFSHDASLKGAPSGFTLPIRDVRASVGAG 600

Query: 600 FIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS 636
           FIYPLVGTMSTMPGLPTRPCFY+ID+DT TGKV+GLS
Sbjct: 601 FIYPLVGTMSTMPGLPTRPCFYDIDIDTETGKVLGLS 637

Length = 637

>gnl\|CDD\|240394 PTZ00386, PTZ00386, formyl tetrahydrofolate synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|216402 pfam01268, FTHFS, Formate--tetrahydrofolate ligase	Back alignment and domain information

>gnl\|CDD\|238266 cd00477, FTHFS, Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate	Back alignment and domain information

>gnl\|CDD\|225354 COG2759, MIS1, Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|237403 PRK13505, PRK13505, formate--tetrahydrofolate ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|237404 PRK13506, PRK13506, formate--tetrahydrofolate ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|184098 PRK13507, PRK13507, formate--tetrahydrofolate ligase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		636
PLN02759		637	Formate--tetrahydrofolate ligase	100.0
PTZ00386		625	formyl tetrahydrofolate synthetase; Provisional	100.0
PRK13507		587	formate--tetrahydrofolate ligase; Provisional	100.0
PF01268		557	FTHFS: Formate--tetrahydrofolate ligase; InterPro:	100.0
COG2759		554	MIS1 Formyltetrahydrofolate synthetase [Nucleotide	100.0
PRK13506		578	formate--tetrahydrofolate ligase; Provisional	100.0
KOG4230		935	consensus C1-tetrahydrofolate synthase [Coenzyme t	100.0
PRK13505		557	formate--tetrahydrofolate ligase; Provisional	100.0
cd00477		524	FTHFS Formyltetrahydrofolate synthetase (FTHFS) ca	100.0
TIGR03029		274	EpsG chain length determinant protein tyrosine kin	96.76
TIGR01007		204	eps_fam capsular exopolysaccharide family. This mo	96.02
cd01983		99	Fer4_NifH The Fer4_NifH superfamily contains a var	96.02
CHL00175		281	minD septum-site determining protein; Validated	95.92
PRK11519		719	tyrosine kinase; Provisional	95.9
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	95.37
TIGR03018		207	pepcterm_TyrKin exopolysaccharide/PEPCTERM locus t	95.32
PRK13705		388	plasmid-partitioning protein SopA; Provisional	95.24
PRK09841		726	cryptic autophosphorylating protein tyrosine kinas	95.15
cd02033		329	BchX Chlorophyllide reductase converts chlorophyll	95.03
TIGR03453		387	partition_RepA plasmid partitioning protein RepA.	94.87
PHA02519		387	plasmid partition protein SopA; Reviewed	94.74
TIGR01968		261	minD_bact septum site-determining protein MinD. Th	94.69
COG2805		353	PilT Tfp pilus assembly protein, pilus retraction	94.38
TIGR00347		166	bioD dethiobiotin synthase. Dethiobiotin synthase	94.26
COG0489		265	Mrp ATPases involved in chromosome partitioning [C	94.17
PRK13869		405	plasmid-partitioning protein RepA; Provisional	94.02
cd00550		254	ArsA_ATPase Oxyanion-translocating ATPase (ArsA).	93.25
cd02037		169	MRP-like MRP (Multiple Resistance and pH adaptatio	93.21
COG2894		272	MinD Septum formation inhibitor-activating ATPase	92.86
cd02036		179	MinD Bacterial cell division requires the formatio	92.6
cd02117		212	NifH_like This family contains the NifH (iron prot	92.35
PRK13185		270	chlL protochlorophyllide reductase iron-sulfur ATP	92.25
PF02374		305	ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_	91.22
PF02367		123	UPF0079: Uncharacterised P-loop hydrolase UPF0079;	91.1
TIGR01969		251	minD_arch cell division ATPase MinD, archaeal. Thi	91.09
cd02040		270	NifH NifH gene encodes component II (iron protein)	91.09
PRK13230		279	nitrogenase reductase-like protein; Reviewed	91.01
cd02032		267	Bchl_like This family of proteins contains bchL an	90.94
PRK00698		205	tmk thymidylate kinase; Validated	90.92
TIGR01281		268	DPOR_bchL light-independent protochlorophyllide re	90.64
TIGR00064		272	ftsY signal recognition particle-docking protein F	90.43
PLN02924		220	thymidylate kinase	90.35
TIGR03815		322	CpaE_hom_Actino helicase/secretion neighborhood Cp	90.34
PRK10037		250	cell division protein; Provisional	90.31
PF01656		195	CbiA: CobQ/CobB/MinD/ParA nucleotide binding domai	90.13
PRK13235		274	nifH nitrogenase reductase; Reviewed	89.89
TIGR01287		275	nifH nitrogenase iron protein. This model describe	89.86
PRK11670		369	antiporter inner membrane protein; Provisional	89.52
PHA02518		211	ParA-like protein; Provisional	89.37
COG0125		208	Tmk Thymidylate kinase [Nucleotide transport and m	89.26
PRK13232		273	nifH nitrogenase reductase; Reviewed	89.03
PRK15452		443	putative protease; Provisional	88.95
PLN02591		250	tryptophan synthase	88.95
PF06564		243	YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ p	88.72
PF09140		261	MipZ: ATPase MipZ; InterPro: IPR015223 Cell divisi	88.69
PRK13234		295	nifH nitrogenase reductase; Reviewed	88.6
TIGR00041		195	DTMP_kinase thymidylate kinase. Function: phosphor	88.45
PRK00300		205	gmk guanylate kinase; Provisional	88.32
PRK00090		222	bioD dithiobiotin synthetase; Reviewed	88.31
TIGR03371		246	cellulose_yhjQ cellulose synthase operon protein Y	88.16
CHL00072		290	chlL photochlorophyllide reductase subunit L	87.97
PRK13973		213	thymidylate kinase; Provisional	87.9
cd01672		200	TMPK Thymidine monophosphate kinase (TMPK), also k	87.54
TIGR02016		296	BchX chlorophyllide reductase iron protein subunit	87.19
PRK13233		275	nifH nitrogenase reductase; Reviewed	86.56
TIGR00150		133	HI0065_YjeE ATPase, YjeE family. Members of this f	86.54
cd02035		217	ArsA ArsA ATPase functionas as an efflux pump loca	86.45
PRK13768		253	GTPase; Provisional	86.4
PRK10818		270	cell division inhibitor MinD; Provisional	86.16
COG2804		500	PulE Type II secretory pathway, ATPase PulE/Tfp pi	86.05
PRK04296		190	thymidine kinase; Provisional	86.03
PRK13111		258	trpA tryptophan synthase subunit alpha; Provisiona	85.99
PRK10416		318	signal recognition particle-docking protein FtsY;	85.98
PRK10646		153	ADP-binding protein; Provisional	85.92
PF13500		199	AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R	85.86
CHL00200		263	trpA tryptophan synthase alpha subunit; Provisiona	85.81
cd03110		179	Fer4_NifH_child This protein family's function is	85.33
TIGR00262		256	trpA tryptophan synthase, alpha subunit. Tryptopha	84.96
COG1149		284	MinD superfamily P-loop ATPase containing an inser	84.95
PF02223		186	Thymidylate_kin: Thymidylate kinase; InterPro: IPR	84.94
PF02421		156	FeoB_N: Ferrous iron transport protein B; InterPro	84.81
cd03111		106	CpaE_like This protein family consists of proteins	84.75
COG0003		322	ArsA Predicted ATPase involved in chromosome parti	84.46
PRK13236		296	nitrogenase reductase; Reviewed	84.4
COG0802		149	Predicted ATPase or kinase [General function predi	83.98
TIGR00475		581	selB selenocysteine-specific elongation factor Sel	83.86
TIGR03263		180	guanyl_kin guanylate kinase. Members of this famil	83.6
cd04165		224	GTPBP1_like GTPBP1-like. Mammalian GTP binding pro	83.52
PRK14974		336	cell division protein FtsY; Provisional	83.22
PRK05480		209	uridine/cytidine kinase; Provisional	82.94
PRK08233		182	hypothetical protein; Provisional	82.84
PRK13976		209	thymidylate kinase; Provisional	82.71
PRK13231		264	nitrogenase reductase-like protein; Reviewed	82.54
cd02025		220	PanK Pantothenate kinase (PanK) catalyzes the phos	82.32
cd02042		104	ParA ParA and ParB of Caulobacter crescentus belon	82.31
TIGR03499		282	FlhF flagellar biosynthetic protein FlhF.	82.27
PRK12374		231	putative dithiobiotin synthetase; Provisional	81.58
PRK13849		231	putative crown gall tumor protein VirC1; Provision	81.46
PRK10867		433	signal recognition particle protein; Provisional	81.12
PF13614		157	AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ	81.1
COG1797		451	CobB Cobyrinic acid a,c-diamide synthase [Coenzyme	81.01
cd01828		169	sialate_O-acetylesterase_like2 sialate_O-acetylest	80.69
cd03115		173	SRP The signal recognition particle (SRP) mediates	80.66
PRK06278		476	cobyrinic acid a,c-diamide synthase; Validated	80.66
cd01822		177	Lysophospholipase_L1_like Lysophospholipase L1-lik	80.59
PRK00089		292	era GTPase Era; Reviewed	80.42
COG1192		259	Soj ATPases involved in chromosome partitioning [C	80.32
PRK00889		175	adenylylsulfate kinase; Provisional	80.15

>PLN02759 Formate--tetrahydrofolate ligase	Back alignment and domain information

Probab=100.00  E-value=6.7e-291  Score=2321.92  Aligned_cols=633  Identities=87%  Similarity=1.339  Sum_probs=622.5

Q ss_pred             CCCccCcccCCCCCChHHHHccCCCCCHHHHHHHcCCCCcccccccCeeeeeccchhhhccCCCCCcEEEEeecCCCCCC
Q 006673            4 SKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLG   83 (636)
Q Consensus         4 ~~~~~~~~~~~~m~sd~eia~~~~~~~I~~ia~~lgl~~~~l~~YG~~kAKi~~~~~~~~~~~~~gklilVTaitPTP~G   83 (636)
                      |+...+++++.||||||||||+++++||++||+++||.+|+||+||+|||||+++++++++++|+|||||||||||||+|
T Consensus         4 ~~~~~~~~~~~~~~sDieIa~~~~~~~I~~iA~~lgl~~~~le~YG~ykAKi~l~~l~~~~~~~~gklIlVTaitPTP~G   83 (637)
T PLN02759          4 SSSRRKLEVKSPVPADIDIAQSVEPLHISEIAKALGLLPDEYDLYGKYKAKVLLSVRDRLAGAPDGYYVVVAGITPTPLG   83 (637)
T ss_pred             cCCCCCCCCCCCCCCHHHHHhhCCCcCHHHHHHHcCCChhhhccCCCcceEEcHHHHhhhccCCCCcEEEEEecCCCCCC
Confidence            33445577899999999999999999999999999999999999999999999999999998999999999999999999


Q ss_pred             CCcchhHHHHHHHHhhhcCCcEEEEeeCCCCCCccccccCCCCCCceeeecCccccccccchhhHHHHHHhHHHHHHHhh
Q 006673           84 EGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTR  163 (636)
Q Consensus        84 EGKtTttIGL~~aL~~~lg~~~~~~lRePSlGP~FGiKGGAaGGGysqv~Pme~iNLHfTGD~hAItaA~NLlaA~idn~  163 (636)
                      ||||||||||+|||++|+||++++|||||||||||||||||||||||||+|||||||||||||||||||||||||+||||
T Consensus        84 EGKTTttIGL~~aL~~~lgk~~~~~lRePSlGP~FGiKGGAaGGGysQv~Pme~iNLHfTGD~hAItaA~NLlaA~idn~  163 (637)
T PLN02759         84 EGKSTTTIGLCQALGAYLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAITAANNLLAAAIDTR  163 (637)
T ss_pred             CCchhHHHHHHHHHHHHhCCeeEEEeecCCcCCcCCcccccCCCcccccccHhhhcccccchHHHHHHHHHHHHHHHHHH
Confidence            99999999999999656999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccCChhHhhhccCCCCCcCCcchhHHHHHHHHhhcCCCCCCCCCCHHHHhhhccCCCCCCceeeeecccccccccc
Q 006673          164 IFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLR  243 (636)
Q Consensus       164 i~~~n~~~~~~~~~~l~~~~~~~~r~~~~~~~~rl~~~~i~~~~p~~l~~~~~~~~~~L~IDp~~I~w~Rv~D~NDR~LR  243 (636)
                      |||||+|+|++||+||||..++|||+|++.|+|||+||||+|+|||+||+|||++|++|+|||++|+|+||||||||+||
T Consensus       164 i~~~n~~~~~~l~~~l~p~~~~~~r~~~~~~~~rl~~l~i~~~~p~~lt~~e~~~~~~L~IDp~~I~w~RvlD~NDR~LR  243 (637)
T PLN02759        164 VFHEATQSDKALFNRLCPANKEGKRSFAAVMFRRLKKLGISKTDPDELTPEERKKFARLDIDPASITWRRVMDVNDRFLR  243 (637)
T ss_pred             HhhccccchhhhhhccccccccccccccHHHHHHHHhhccCcCCccccCHHHhhhhhccCcCcceeEEEeeccccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeccCCCCCCcceecceeEeehhhHHHHHHccCCHHHHHHHhcCcEEeecCCCCceeecccccchhHHHHhhhccCcC
Q 006673          244 KITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPT  323 (636)
Q Consensus       244 ~I~iGlg~~~~G~~r~~gFdITvASEiMAIl~La~~l~Dlk~Rl~~ivva~~~~g~Pvta~DL~~~GAm~~LLkdAlkPN  323 (636)
                      +|+||+|+++||++||+|||||||||||||||||+|++|||+||||||||||+||+||||+||+++||||+|||||||||
T Consensus       244 ~I~vGlgg~~~G~~Re~gFdITvASEiMAILcLa~dl~Dlk~Rlg~ivvg~~~~g~pVta~DL~~~GAmt~LLkDAikPN  323 (637)
T PLN02759        244 KITVGQGPEEKGMTRETGFDITVASEIMAVLALTTSLADMRERLGKMVIGNSKAGEPVTADDLGVGGALTVLMKDAIHPT  323 (637)
T ss_pred             ceeeCcCCCCCCCcccCCceeeHHHHHHHHHHHcCCHHHHHHHHhCEEEEEcCCCCceeHHHcCchHhHHHHHHhhhCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeecCceeEEcccCccccccCCchHHHHHHHHhhcCCCCeEEeeccccccccchhccccccccCCCCcceEEEEeeeh
Q 006673          324 LMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIR  403 (636)
Q Consensus       324 LvQTlEgtPa~VHgGPFANIAhG~nSviAt~~aLklag~~dyvVTEAGFGaDlGaEKF~dIkcr~~gl~P~avVlVaTvR  403 (636)
                      ||||+|||||||||||||||||||||||||++||||+|++||||||||||||||||||||||||.+|++|||+|||||||
T Consensus       324 LvQTlEgtPa~vHgGPFANIAhG~nSviAtk~ALkla~~~dyvVTEAGFGaDlGaEKF~dIkcR~~gl~P~a~VlVaTvR  403 (637)
T PLN02759        324 LMQTLEGTPVLVHAGPFANIAHGNSSIVADQIALKLVGPGGFVVTEAGFGADIGTEKFMNIKCRYSGLKPQCAVIVATVR  403 (637)
T ss_pred             ceeecCCCceEEecCCcccccccchHHHHHHHHHhhcCCCCeEEEecccCCCCchhheecccccccCCCCCEEEEEeehH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCccCCCCCcccccccCHHHHHHHHhHHHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHcCCCeE
Q 006673          404 ALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDA  483 (636)
Q Consensus       404 ALK~HGG~~~~~~g~pL~~~l~~eNleaL~~G~~NL~kHIeNi~~fGvPvVVAINrF~tDT~aEI~~v~e~c~~~Gv~~~  483 (636)
                      |||||||+++..+|+|||++|.+||+++|++||+||.|||+|+++||+|||||||+|++||++||++|+++|+++|+.++
T Consensus       404 ALK~hGG~~~~~pg~~l~~~l~~enl~al~~G~~NL~~Hi~n~~~fg~pvVVaiN~F~~Dt~~Ei~~v~~~~~~~ga~~~  483 (637)
T PLN02759        404 ALKMHGGGPAVVAGKPLDHAYTTENVELVEAGCVNLARHIENTKSYGVNVVVAINMFATDTEAELEAVRQAALAAGAFDA  483 (637)
T ss_pred             HHHhcCCCCcccCCccchhhhcccCHHHHHhhhhhHHHHHHHHHHcCCCeEEEecCCCCCCHHHHHHHHHHHHHcCCCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999996459


Q ss_pred             EEcCccccCccchhHHHHHHHHHhhcCCCCCcccCCCCCCHHHHHHHHHH-HhCCCceeeCHHHHHHHHHHHhCCCCCCC
Q 006673          484 VVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIAR-SYGASGVEYSEEAEKQIEMYTGQGFSGLP  562 (636)
Q Consensus       484 avs~~wa~GGeGa~eLA~aVv~a~e~~~s~fk~LY~~~~~L~eKIetIA~-IYGA~~V~~S~~A~kqLk~ie~lG~~~LP  562 (636)
                      ++|+||++||+|++|||++|+++|++++++|+|||++++||+|||++||+ ||||++|+||++|++||++||++||++||
T Consensus       484 ~~~~~wa~GGeGa~eLA~~Vv~a~e~~~s~fk~LYd~~~sI~eKIetIAkeIYGAd~VefS~~AkkqLk~ie~lGfg~LP  563 (637)
T PLN02759        484 VLCTHHAHGGKGAVDLGEAVQKACEGNSQPFKFLYPLDISIKEKIEAIAKESYGADGVEYSEQAEAQIEMYTRQGFSNLP  563 (637)
T ss_pred             EEechhhcccHHHHHHHHHHHHHHhcCCCCccccCCCCCCHHHHHHHHHHHccCCCceEECHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999999986567899999999999999999999 99999999999999999999999999999


Q ss_pred             eeEeecCCCCCCCCCCCCCCCCceEEeeEEEeeCCCceEEeecCccccCCCCCCCCceeeeeeeCCCCeEeccC
Q 006673          563 ICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS  636 (636)
Q Consensus       563 VCmAKTqySlSdDp~l~G~P~gf~l~Vrdv~~~aGAGFival~G~ImtMPGLPk~Paa~~Idvd~~~G~I~GL~  636 (636)
                      ||||||||||||||+++|+|+||+||||||++|+||||||++||+|||||||||+|||++||||+++|+|+|||
T Consensus       564 VCmAKTqyS~S~dp~l~G~P~gf~~~ir~~~~~~GAGFiv~l~G~i~tMPGLp~~Paa~~idid~~~G~i~GL~  637 (637)
T PLN02759        564 ICMAKTQYSFSHDASLKGAPSGFTLPIRDVRASVGAGFIYPLVGTMSTMPGLPTRPCFYDIDIDTETGKVLGLS  637 (637)
T ss_pred             eeEecCCCCcCCChhhhCCCCCcEEEeeEEEEcCCCCEEEEecCccccCCCCCCCCcccccccccCCCEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998

>PTZ00386 formyl tetrahydrofolate synthetase; Provisional	Back alignment and domain information

>PRK13507 formate--tetrahydrofolate ligase; Provisional	Back alignment and domain information

>PF01268 FTHFS: Formate--tetrahydrofolate ligase; InterPro: IPR000559 Formate--tetrahydrofolate ligase (6	Back alignment and domain information

>COG2759 MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK13506 formate--tetrahydrofolate ligase; Provisional	Back alignment and domain information

>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]	Back alignment and domain information

>PRK13505 formate--tetrahydrofolate ligase; Provisional	Back alignment and domain information

>cd00477 FTHFS Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate	Back alignment and domain information

>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG	Back alignment and domain information

>TIGR01007 eps_fam capsular exopolysaccharide family	Back alignment and domain information

>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain	Back alignment and domain information

>CHL00175 minD septum-site determining protein; Validated	Back alignment and domain information

>PRK11519 tyrosine kinase; Provisional	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase	Back alignment and domain information

>PRK13705 plasmid-partitioning protein SopA; Provisional	Back alignment and domain information

>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional	Back alignment and domain information

>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring	Back alignment and domain information

>TIGR03453 partition_RepA plasmid partitioning protein RepA	Back alignment and domain information

>PHA02519 plasmid partition protein SopA; Reviewed	Back alignment and domain information

>TIGR01968 minD_bact septum site-determining protein MinD	Back alignment and domain information

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>TIGR00347 bioD dethiobiotin synthase	Back alignment and domain information

>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK13869 plasmid-partitioning protein RepA; Provisional	Back alignment and domain information

>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA)	Back alignment and domain information

>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily	Back alignment and domain information

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]	Back alignment and domain information

>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell	Back alignment and domain information

>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase	Back alignment and domain information

>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional	Back alignment and domain information

>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B	Back alignment and domain information

>PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop	Back alignment and domain information

>TIGR01969 minD_arch cell division ATPase MinD, archaeal	Back alignment and domain information

>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase	Back alignment and domain information

>PRK13230 nitrogenase reductase-like protein; Reviewed	Back alignment and domain information

>cd02032 Bchl_like This family of proteins contains bchL and chlL	Back alignment and domain information

>PRK00698 tmk thymidylate kinase; Validated	Back alignment and domain information

>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein	Back alignment and domain information

>TIGR00064 ftsY signal recognition particle-docking protein FtsY	Back alignment and domain information

>PLN02924 thymidylate kinase	Back alignment and domain information

>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein	Back alignment and domain information

>PRK10037 cell division protein; Provisional	Back alignment and domain information

>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases	Back alignment and domain information

>PRK13235 nifH nitrogenase reductase; Reviewed	Back alignment and domain information

>TIGR01287 nifH nitrogenase iron protein	Back alignment and domain information

>PRK11670 antiporter inner membrane protein; Provisional	Back alignment and domain information

>PHA02518 ParA-like protein; Provisional	Back alignment and domain information

>COG0125 Tmk Thymidylate kinase [Nucleotide transport and metabolism]	Back alignment and domain information

>PRK13232 nifH nitrogenase reductase; Reviewed	Back alignment and domain information

>PRK15452 putative protease; Provisional	Back alignment and domain information

>PLN02591 tryptophan synthase	Back alignment and domain information

>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon	Back alignment and domain information

>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments	Back alignment and domain information

>PRK13234 nifH nitrogenase reductase; Reviewed	Back alignment and domain information

>TIGR00041 DTMP_kinase thymidylate kinase	Back alignment and domain information

>PRK00300 gmk guanylate kinase; Provisional	Back alignment and domain information

>PRK00090 bioD dithiobiotin synthetase; Reviewed	Back alignment and domain information

>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ	Back alignment and domain information

>CHL00072 chlL photochlorophyllide reductase subunit L	Back alignment and domain information

>PRK13973 thymidylate kinase; Provisional	Back alignment and domain information

>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor	Back alignment and domain information

>TIGR02016 BchX chlorophyllide reductase iron protein subunit X	Back alignment and domain information

>PRK13233 nifH nitrogenase reductase; Reviewed	Back alignment and domain information

>TIGR00150 HI0065_YjeE ATPase, YjeE family	Back alignment and domain information

>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell	Back alignment and domain information

>PRK13768 GTPase; Provisional	Back alignment and domain information

>PRK10818 cell division inhibitor MinD; Provisional	Back alignment and domain information

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PRK04296 thymidine kinase; Provisional	Back alignment and domain information

>PRK13111 trpA tryptophan synthase subunit alpha; Provisional	Back alignment and domain information

>PRK10416 signal recognition particle-docking protein FtsY; Provisional	Back alignment and domain information

>PRK10646 ADP-binding protein; Provisional	Back alignment and domain information

>PF13500 AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R_A 4A0H_B 4A0F_B 3FMI_C 3FPA_D 3FMF_C 3FGN_A	Back alignment and domain information

>CHL00200 trpA tryptophan synthase alpha subunit; Provisional	Back alignment and domain information

>cd03110 Fer4_NifH_child This protein family's function is unkown	Back alignment and domain information

>TIGR00262 trpA tryptophan synthase, alpha subunit	Back alignment and domain information

>COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]	Back alignment and domain information

>PF02223 Thymidylate_kin: Thymidylate kinase; InterPro: IPR018094 Thymidylate kinase (2	Back alignment and domain information

>PF02421 FeoB_N: Ferrous iron transport protein B; InterPro: IPR011619 Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions	Back alignment and domain information

>cd03111 CpaE_like This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster	Back alignment and domain information

>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK13236 nitrogenase reductase; Reviewed	Back alignment and domain information

>COG0802 Predicted ATPase or kinase [General function prediction only]	Back alignment and domain information

>TIGR00475 selB selenocysteine-specific elongation factor SelB	Back alignment and domain information

>TIGR03263 guanyl_kin guanylate kinase	Back alignment and domain information

>cd04165 GTPBP1_like GTPBP1-like	Back alignment and domain information

>PRK14974 cell division protein FtsY; Provisional	Back alignment and domain information

>PRK05480 uridine/cytidine kinase; Provisional	Back alignment and domain information

>PRK08233 hypothetical protein; Provisional	Back alignment and domain information

>PRK13976 thymidylate kinase; Provisional	Back alignment and domain information

>PRK13231 nitrogenase reductase-like protein; Reviewed	Back alignment and domain information

>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway	Back alignment and domain information

>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation	Back alignment and domain information

>TIGR03499 FlhF flagellar biosynthetic protein FlhF	Back alignment and domain information

>PRK12374 putative dithiobiotin synthetase; Provisional	Back alignment and domain information

>PRK13849 putative crown gall tumor protein VirC1; Provisional	Back alignment and domain information

>PRK10867 signal recognition particle protein; Provisional	Back alignment and domain information

>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D	Back alignment and domain information

>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]	Back alignment and domain information

>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases	Back alignment and domain information

>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes	Back alignment and domain information

>PRK06278 cobyrinic acid a,c-diamide synthase; Validated	Back alignment and domain information

>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases	Back alignment and domain information

>PRK00089 era GTPase Era; Reviewed	Back alignment and domain information

>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK00889 adenylylsulfate kinase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		636
1fpm_A		557	Monovalent Cation Binding Sites In N10-formyltetrah		1e-105
1eg7_A		557	The Crystal Structure Of Formyltetrahydrofolate Syn		1e-104
3do6_A		543	Crystal Structure Of Putative Formyltetrahydrofolat		4e-81
2eo2_A		71	Solution Structure Of The Insertion Region (510-573		7e-16

>pdb|1FPM|A Chain A, Monovalent Cation Binding Sites In N10-formyltetrahydrofolate Synthetase From Moorella Thermoacetica Length = 557

Back alignment and structure

Iteration: 1

Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust. Identities = 201/415 (48%), Positives = 258/415 (62%), Gaps = 16/415 (3%) Query: 222 LDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLA 281 L+IDP +ITWRRV+D+NDR LR I IG G + G+ RETGFDISVASE+MA L L + L Sbjct: 157 LNIDPRTITWRRVIDLNDRALRNIVIGLGGKANGVPRETGFDISVASEVMACLCLASDLM 216 Query: 282 DMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFA 341 D++ER ++V+G + G P+TA DL G++ +LMKDAI P L+QTLE TP +H GPFA Sbjct: 217 DLKERFSRIVVGYTYDGKPVTAGDLEAQGSMALLMKDAIKPNLVQTLENTPAFIHGGPFA 276 Query: 342 NIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVAT 401 NIAHG +SI+A K ALKL +VVTEAGFGAD+GAEKF ++KCRY+G P VIVAT Sbjct: 277 NIAHGCNSIIATKTALKL---ADYVVTEAGFGADLGAEKFYDVKCRYAGFKPDATVIVAT 333 Query: 402 IRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFA 461 +RALKMHGG P+ EN+ + G NL +HI N +G VVA+N F Sbjct: 334 VRALKMHGGVPK--------SDLATENLEALREGFANLEKHIENIGKFGVPAVVAINAFP 385 Query: 462 TDSKXXXXXXXXXXXXXXXXXXVVCSHHAHGGKGAVDLGIAVQRACENVTQPLKFLYPLD 521 TD++ V A GG+G ++L V + E+ LY LD Sbjct: 386 TDTEAELNLLYELCAKAGAE---VALSWAKGGEGGLELARKVLQTLESRPSNFHVLYNLD 442 Query: 522 VSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKG 580 +SIK+KI IA YGA GV Y+ EA+K I+ Y G+ LP+ MAKTQYSFS + + G Sbjct: 443 LSIKDKIAKIATEIYGADGVNYTAEADKAIQRYESLGYGNLPVVMAKTQYSFSDDMTKLG 502 Query: 581 APTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGL 635 P F + +R+VR S G I P+ G + TMPGLP RP ID+D A G + GL Sbjct: 503 RPRNFTITVREVRLSAGGRLIVPITGAIMTMPGLPKRPAACNIDID-ADGVITGL 556

PyMOL of 1fpm

>pdb|1EG7|A Chain A, The Crystal Structure Of Formyltetrahydrofolate Synthetase From Moorella Thermoacetica Length = 557

Back alignment and structure

>pdb|3DO6|A Chain A, Crystal Structure Of Putative Formyltetrahydrofolate Synthetase (Tm1766) From Thermotoga Maritima At 1.85 A Resolution Length = 543

Back alignment and structure

>pdb|2EO2|A Chain A, Solution Structure Of The Insertion Region (510-573) Of Fthfs Domain From Mouse Methylenetetrahydrofolate Dehydrogenase (Nadp+ Dependent) 1-Like Protein Length = 71

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		636
3pzx_A		557	Formate--tetrahydrofolate ligase; HET: TOE; 2.20A	0.0
3do6_A		543	Formate--tetrahydrofolate ligase; TM1766, putative	0.0
2eo2_A		71	Adult MALE hypothalamus cDNA, riken FULL-length en	7e-37
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08

>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} Length = 543	Back alignment and structure

 Score =  843 bits (2181), Expect = 0.0
 Identities = 245/609 (40%), Positives = 342/609 (56%), Gaps = 69/609 (11%)

Query: 29  LHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKST 88
             I EIA +L LK +    YG Y AK+    L  LE   DG  ++V  +TPTP GEGK+T
Sbjct: 3   KPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTT 62

Query: 89  TTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHA 148
           T++GL  +L   + KK +  LR+PS GPT G+KGGA GGG S+V+P DE NLH TGD+HA
Sbjct: 63  TSIGLSMSLNR-IGKKSIVTLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHA 121

Query: 149 ITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKP 208
           + +A+NLLAA +D+ I H          N L                             
Sbjct: 122 VASAHNLLAAVLDSHIKHG---------NEL----------------------------- 143

Query: 209 EDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVAS 268
                          ID   + W+R MD+NDR LR I IG G    G  RE  F I+ AS
Sbjct: 144 --------------KIDITRVFWKRTMDMNDRALRSIVIGLGGSANGFPREDSFIITAAS 189

Query: 269 EIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTL 328
           E+MA+LAL+ ++ D++ERLGK+++        +   DLG+ GA+ VL+KDAINP L+QT 
Sbjct: 190 EVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDAINPNLVQTT 249

Query: 329 EGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRY 388
           EGTP L+H GPFANIAHG +SI+A K+A+KL     + VTEAGFGAD+GAEKF++   R 
Sbjct: 250 EGTPALIHCGPFANIAHGTNSIIATKMAMKL---SEYTVTEAGFGADLGAEKFIDFVSRV 306

Query: 389 SGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVNLARHIANTKA 448
            G  P  AV+VAT+RALK HGG                EN+  ++ G  NL  H+ N + 
Sbjct: 307 GGFYPNAAVLVATVRALKYHGGANL--------KNIHEENLEALKEGFKNLRVHVENLRK 358

Query: 449 YGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRACE 508
           +   VVVA+N F+TD++ E+  V       G     V      G +G V+L  AV  A +
Sbjct: 359 FNLPVVVALNRFSTDTEKEIAYVVKECEKLGV-RVAVSEVFKKGSEGGVELAKAVAEAAK 417

Query: 509 NVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQGFSGLPICMAK 567
           +      +LY ++  +++KI+ +A+  Y A  VE+S+ A+  ++     GF  LP+ +AK
Sbjct: 418 D--VEPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAK 475

Query: 568 TQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDT 627
           T  S SH+ + +GAP G+   + D+  S GAGF+  L G ++ MPGLP +P    +DVD 
Sbjct: 476 TPKSISHDPSLRGAPEGYTFVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVD- 534

Query: 628 ATGKVVGLS 636
            +G +VG+S
Sbjct: 535 DSGNIVGVS 543

PyMOL of 3do6

>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus} Length = 71	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 57.2 bits (137), Expect = 1e-08
 Identities = 78/529 (14%), Positives = 153/529 (28%), Gaps = 162/529 (30%)

Query: 26  VEPLHISEIAQELNLKP---------NHYDLYGKY------KAKVLLSVLDELEGSADGY 70
           + P+   +    +  +          N   ++ KY          L   L EL       
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR---PAK 151

Query: 71  YVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYS 130
            V++ G+    LG GK+   + +C         KV   +        F +         +
Sbjct: 152 NVLIDGV----LGSGKTWVALDVCL------SYKVQCKM----DFKIFWLNLKNCNSPET 197

Query: 131 QVIPMDEFNLHLTGD--------------IHAITAA-----------NNLL--------- 156
            +  + +    +  +              IH+I A            N LL         
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK 257

Query: 157 -AAAID--------TRIFHEASQSDKALFNRLCPPNKEGERSFSNIM--FRRLKKLGI-S 204
              A +        TR         K + + L         S  +        +   +  
Sbjct: 258 AWNAFNLSCKILLTTR--------FKQVTDFL-SAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 205 K---TKPEDLTPEE--------INRFARLDIDPASITWRRVMDVN-DRFLRKITIG---Q 249
           K    +P+DL P E        ++  A    D  + TW     VN D+    I       
Sbjct: 309 KYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLA-TWDNWKHVNCDKLTTIIESSLNVL 366

Query: 250 GPEE-KGMVRETG-F--DISVASEIMAVL---ALTTSLADMRERLGK--MVIGNSKAGDP 300
            P E + M      F     + + +++++    + + +  +  +L K  +V    K    
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST- 425

Query: 301 ITADDLGVGGALTVLMKDAINPTLMQTL------------EGTPVLVHAGPFAN-IA-HG 346
           I+   +     L + +K      L +++            +          F + I  H 
Sbjct: 426 ISIPSI----YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL 481

Query: 347 NSSIVADKIAL--KLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQC-AVIVATIR 403
            +    +++ L   +     F+        D    +F+  K R+          I+ T++
Sbjct: 482 KNIEHPERMTLFRMV-----FL--------DF---RFLEQKIRHDSTAWNASGSILNTLQ 525

Query: 404 ALKMHGGGPQVVAGKPLDHAYLNE--------NVALVEAGCVNLARHIA 444
            LK +   P +    P     +N            L+ +   +L R IA
Sbjct: 526 QLKFY--KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR-IA 571

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		636
3do6_A		543	Formate--tetrahydrofolate ligase; TM1766, putative	100.0
3pzx_A		557	Formate--tetrahydrofolate ligase; HET: TOE; 2.20A	100.0
2eo2_A		71	Adult MALE hypothalamus cDNA, riken FULL-length en	99.95
3cio_A		299	ETK, tyrosine-protein kinase ETK; WZC, escherichia	96.96
3bfv_A		271	CAPA1, CAPB2, membrane protein CAPA1, protein tyro	96.87
3la6_A		286	Tyrosine-protein kinase WZC; P-loop protein, nucle	96.51
3zq6_A		324	Putative arsenical pump-driving ATPase; tail-ancho	95.52
1hyq_A		263	MIND, cell division inhibitor (MIND-1); MINC, FTSZ	95.4
3q9l_A		260	Septum site-determining protein MIND; ATPase, bact	95.25
3ea0_A		245	ATPase, para family; alpha-beta-alpha sandwich, st	94.82
1g3q_A		237	MIND ATPase, cell division inhibitor; alpha-beta-a	94.56
3end_A		307	Light-independent protochlorophyllide reductase ir	94.36
1byi_A		224	Dethiobiotin synthase; biotin synthesis, cyclo-lig	94.34
2woo_A		329	ATPase GET3; tail-anchored, membrane protein, targ	94.33
2ph1_A		262	Nucleotide-binding protein; alpha-beta protein, st	94.27
1wcv_1		257	SOJ, segregation protein; ATPase, bacterial, chrom	93.96
3k9g_A		267	PF-32 protein; ssgcid, SBRI, decode biostructures,	93.9
4tmk_A		213	Protein (thymidylate kinase); ATP:DTMP phosphotran	93.78
2woj_A		354	ATPase GET3; tail-anchored, membrane protein, targ	93.73
3lv8_A		236	DTMP kinase, thymidylate kinase; structural genomi	93.34
2wwf_A		212	Thymidilate kinase, putative; transferase, malaria	93.27
3ug7_A		349	Arsenical pump-driving ATPase; tail-anchored, memb	93.16
3ld9_A		223	DTMP kinase, thymidylate kinase; ssgcid, NIH, niai	92.75
1nn5_A		215	Similar to deoxythymidylate kinase (thymidylate K;	92.38
3igf_A		374	ALL4481 protein; two-domained protein consisting o	92.08
2oze_A		298	ORF delta'; para, walker type atpases, DNA segrega	91.99
3fkq_A		373	NTRC-like two-domain protein; RER070207001320, str	91.93
4dzz_A		206	Plasmid partitioning protein PARF; deviant walker	91.92
4edh_A		213	DTMP kinase, thymidylate kinase; structural genomi	91.52
1cp2_A		269	CP2, nitrogenase iron protein; oxidoreductase; 1.9	91.22
3iqw_A		334	Tail-anchored protein targeting factor GET3; ATPas	90.97
1ihu_A		589	Arsenical pump-driving ATPase; aluminum fluoride,	90.95
3io3_A		348	DEHA2D07832P; chaperone, membrane traffic, ATPase;	90.94
3cwq_A		209	Para family chromosome partitioning protein; alpha	90.92
3fwy_A		314	Light-independent protochlorophyllide reductase I	90.9
2afh_E		289	Nitrogenase iron protein 1; nitrogen fixation, iro	90.86
3ez2_A		398	Plasmid partition protein A; type IA, DNA binding,	90.65
3kjh_A		254	CO dehydrogenase/acetyl-COA synthase complex, acce	90.61
3of5_A		228	Dethiobiotin synthetase; structural genomics, cent	90.55
3qxc_A		242	Dethiobiotin synthetase; DTBS, structural genomics	90.42
3ez9_A		403	Para; DNA binding, winged-HTH, partition, biosynth	90.36
3v9p_A		227	DTMP kinase, thymidylate kinase; ssgcid, STRU geno	90.03
2xj4_A		286	MIPZ; replication, cell division, ATPase, WACA; 1.	89.78
3fgn_A		251	Dethiobiotin synthetase; biotin biosynthesis, BIOD	89.23
2xxa_A		433	Signal recognition particle protein; protein trans	89.09
1zu4_A		320	FTSY; GTPase, signal recognition particle, SRP, re	89.05
2plr_A		213	DTMP kinase, probable thymidylate kinase; TMP-bind	88.3
3nav_A		271	Tryptophan synthase alpha chain; alpha subunit, st	86.9
2efe_B		181	Small GTP-binding protein-like; GEF, GTPase, VPS9,	86.64
2z0h_A		197	DTMP kinase, thymidylate kinase; ATP-binding, nucl	86.61
2qor_A		204	Guanylate kinase; phosphotransferase, purine metab	86.39
2px0_A		296	Flagellar biosynthesis protein FLHF; SRP GTPase, f	86.24
3vni_A		294	Xylose isomerase domain protein TIM barrel; D-psic	86.04
3pg5_A		361	Uncharacterized protein; structural genomics, PSI-	85.55
1vma_A		306	Cell division protein FTSY; TM0570, structural gen	85.49
3tmk_A		216	Thymidylate kinase; phosphotransferase; HET: T5A;	85.47
2yvu_A		186	Probable adenylyl-sulfate kinase; transferase, str	84.93
3kl4_A		433	SRP54, signal recognition 54 kDa protein; signal r	84.5
1xjc_A		169	MOBB protein homolog; structural genomics, midwest	84.11
3a1s_A		258	Iron(II) transport protein B; FEOB, iron transport	84.06
4hlc_A		205	DTMP kinase, thymidylate kinase; TMK, MRSA, pipiri	83.9
3t1o_A		198	Gliding protein MGLA; G domain containing protein,	83.52
3dm5_A		443	SRP54, signal recognition 54 kDa protein; protein-	83.18
3iev_A		308	GTP-binding protein ERA; ERA, GTPase, KH domain, a	82.95
2r8r_A		228	Sensor protein; KDPD, PFAM02702, MCSG, structural	82.62
2b8t_A		223	Thymidine kinase; deoxyribonucleoside kinase, zinc	82.49
2ocp_A		241	DGK, deoxyguanosine kinase; protein-nucleotide com	82.17
2yc2_C		208	IFT27, small RAB-related GTPase; transport protein	82.11
2wjg_A		188	FEOB, ferrous iron transport protein B homolog; me	82.01
3iby_A		256	Ferrous iron transport protein B; G protein, G dom	82.01
3tau_A		208	Guanylate kinase, GMP kinase; structural genomics,	81.78
2ce2_X		166	GTPase HRAS; signaling protein, guanine nucleotide	81.69
3c5h_A		255	Glucocorticoid receptor DNA-binding factor 1; RAS,	81.2
4eaq_A		229	DTMP kinase, thymidylate kinase; structural genomi	81.1
2hk0_A		309	D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00	81.07
3qxb_A		316	Putative xylose isomerase; structural genomics, jo	80.94
2ekc_A		262	AQ_1548, tryptophan synthase alpha chain; structur	80.71
1ls1_A		295	Signal recognition particle protein; FFH, SRP54, S	80.7
2obn_A		349	Hypothetical protein; structural genomics, joint c	80.32

>3do6_A Formate--tetrahydrofolate ligase; TM1766, putative formyltetrahydrofolate synthetase, structural genomics; HET: MSE; 1.85A {Thermotoga maritima} SCOP: c.37.1.0	Back alignment and structure

Probab=100.00  E-value=7.5e-269  Score=2117.37  Aligned_cols=541  Identities=45%  Similarity=0.758  Sum_probs=535.4

Q ss_pred             CCCHHHHHHHcCCCCcccccccCeeeeeccchhhhccCCCCCcEEEEeecCCCCCCCCcchhHHHHHHHHhhhcCCcEEE
Q 006673           28 PLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVT  107 (636)
Q Consensus        28 ~~~I~~ia~~lgl~~~~l~~YG~~kAKi~~~~~~~~~~~~~gklilVTaitPTP~GEGKtTttIGL~~aL~~~lg~~~~~  107 (636)
                      ++||++||+++||++|||||||+|||||++++++|++++++|||||||||||||+|||||||||||+|||+ |+||++++
T Consensus         2 ~~pI~~iA~~lgi~~~~le~YG~~kAKv~~~~l~~~~~~~~GklIlVTaItPTPaGEGKtTttiGL~~aL~-~lgk~~~~   80 (543)
T 3do6_A            2 MKPIKEIADQLELKDDILYPYGHYIAKIDHRFLKSLENHEDGKLILVTAVTPTPAGEGKTTTSIGLSMSLN-RIGKKSIV   80 (543)
T ss_dssp             CCCHHHHHHHTTCCGGGEEEETTTEEEECTTHHHHTTTSCCCEEEEEEESSCCTTCCCHHHHHHHHHHHHH-HTTCCEEE
T ss_pred             CCCHHHHHHHcCCCHHHHHhCCCccEEecHHHhhhhhcCCCCeEEEEEecCCCCCCCCccchHHHHHHHHH-hcCCeeEE
Confidence            78999999999999999999999999999999999988899999999999999999999999999999995 99999999


Q ss_pred             EeeCCCCCCccccccCCCCCCceeeecCccccccccchhhHHHHHHhHHHHHHHhhhhccccCChhHhhhccCCCCCcCC
Q 006673          108 CLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGE  187 (636)
Q Consensus       108 ~lRePSlGP~FGiKGGAaGGGysqv~Pme~iNLHfTGD~hAItaA~NLlaA~idn~i~~~n~~~~~~~~~~l~~~~~~~~  187 (636)
                      |||||||||||||||||||||||||+|||||||||||||||||||||||||+|||||||||                   
T Consensus        81 ~lRePSlGP~FGiKGGAaGGGysQViPMediNLHfTGD~HAItaAnNLLaA~iDn~i~~gn-------------------  141 (543)
T 3do6_A           81 TLREPSLGPTLGLKGGATGGGRSRVLPSDEINLHFTGDMHAVASAHNLLAAVLDSHIKHGN-------------------  141 (543)
T ss_dssp             EECCCCHHHHHHSCCSTTEETTEEEESHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHTTC-------------------
T ss_pred             EEecCCCCCcCCcccccCCCcceeecchhhccccccchHHHHHHHHHHHHHHHHHHHhccC-------------------
Confidence            9999999999999999999999999999999999999999999999999999999999998                   


Q ss_pred             cchhHHHHHHHHhhcCCCCCCCCCCHHHHhhhccCCCCCCceeeeecccccccccceeeeccCCCCCCcceecceeEeeh
Q 006673          188 RSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVA  267 (636)
Q Consensus       188 r~~~~~~~~rl~~~~i~~~~p~~l~~~~~~~~~~L~IDp~~I~w~Rv~D~NDR~LR~I~iGlg~~~~G~~r~~gFdITvA  267 (636)
                                                       +|+|||++|+||||||||||+||+|+||+|++.||+|||||||||||
T Consensus       142 ---------------------------------~L~IDp~~I~WkRv~D~NDR~LR~IvvGlGg~~~G~~re~gFdITvA  188 (543)
T 3do6_A          142 ---------------------------------ELKIDITRVFWKRTMDMNDRALRSIVIGLGGSANGFPREDSFIITAA  188 (543)
T ss_dssp             ---------------------------------TTCEEEEEECCCEEESSCCGGGSSEEESCSSGGGCCCEEECEEEGGG
T ss_pred             ---------------------------------ccCCCCCeEEEEecccccCceeeeeEECCCCCCCCCccccceeEEeh
Confidence                                             79999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHccCCHHHHHHHhcCcEEeecCCCCceeecccccchhHHHHhhhccCcCceeeecCceeEEcccCccccccCC
Q 006673          268 SEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGN  347 (636)
Q Consensus       268 SEiMAIl~La~~l~Dlk~Rl~~ivva~~~~g~Pvta~DL~~~GAm~~LLkdAlkPNLvQTlEgtPa~VHgGPFANIAhG~  347 (636)
                      ||||||||||+|++|||+||||||||||+||+||||+||+++||||+|||||||||||||||||||||||||||||||||
T Consensus       189 SEiMAILcLa~dl~DLk~Rlg~ivvay~~~g~PVta~DL~~~GAmt~LLkDAikPNLvQTlEgtPa~VHgGPFANIAHGc  268 (543)
T 3do6_A          189 SEVMAILALSENMKDLKERLGKIIVALDADRKIVRISDLGIQGAMAVLLKDAINPNLVQTTEGTPALIHCGPFANIAHGT  268 (543)
T ss_dssp             SHHHHHHHHCSSHHHHHHHHHTCEEEEETTSCEEEHHHHTCHHHHHHHTTTTTSCEEEEETTSCEEEECCCCCSSSSCCB
T ss_pred             hhhhhHHHhcCCHHHHHHHhcCEEEEEcCCCCeEehHhcccchhHHHHHHhhcCccceeeccCCeeEEecCccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcCCCCeEEeeccccccccchhccccccccCCCCcceEEEEeeehhhhhcCCCCCccCCCCCccccccc
Q 006673          348 SSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNE  427 (636)
Q Consensus       348 nSviAt~~aLklag~~dyvVTEAGFGaDlGaEKF~dIkcr~~gl~P~avVlVaTvRALK~HGG~~~~~~g~pL~~~l~~e  427 (636)
                      |||||||+||||+   ||||||||||||||||||||||||.+||+||||||||||||||||||+++        ++|.+|
T Consensus       269 nSviAtk~ALkla---DyvVTEAGFGADlGaEKF~dIKCR~~gl~P~avVlVATvRALK~hGG~~~--------~~l~~e  337 (543)
T 3do6_A          269 NSIIATKMAMKLS---EYTVTEAGFGADLGAEKFIDFVSRVGGFYPNAAVLVATVRALKYHGGANL--------KNIHEE  337 (543)
T ss_dssp             CCHHHHHHHHHHC---SEEEEEBSSSTTTHHHHHHHTHHHHHTCCCSEEEEEECHHHHHHHTTCCG--------GGTTSC
T ss_pred             hHHHHHHHHHhcc---CeEEEecccccccchHhhcCccccccCCCCCEEEEEeehHHHHhcCCCCh--------hhcCcc
Confidence            9999999999999   99999999999999999999999999999999999999999999999987        678899


Q ss_pred             CHHHHHHHHhHHHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHcCCCeEEEcCccccCccchhHHHHHHHHHh
Q 006673          428 NVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVDLGIAVQRAC  507 (636)
Q Consensus       428 NleaL~~G~~NL~kHIeNi~~fGvPvVVAINrF~tDT~aEI~~v~e~c~~~Gv~~~avs~~wa~GGeGa~eLA~aVv~a~  507 (636)
                      |+++|++||+||+|||||+++||+|||||||+|++||++||++|+++|+++|++ +++|+||++||+|++|||++|+++|
T Consensus       338 nl~al~~G~~NL~kHIen~~~fGvpvVVaiN~F~tDT~aEi~~v~~~~~~~G~~-~~~s~~wa~GG~G~~~LA~~Vv~~~  416 (543)
T 3do6_A          338 NLEALKEGFKNLRVHVENLRKFNLPVVVALNRFSTDTEKEIAYVVKECEKLGVR-VAVSEVFKKGSEGGVELAKAVAEAA  416 (543)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTCCHHHHHHHHHHHHTTTCE-EEEECHHHHGGGGSHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCC-EEEechhhccchhHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999995 9999999999999999999999999


Q ss_pred             hcCCCCCcccCCCCCCHHHHHHHHHH-HhCCCceeeCHHHHHHHHHHHhCCCCCCCeeEeecCCCCCCCCCCCCCCCCce
Q 006673          508 ENVTQPLKFLYPLDVSIKEKIDTIAR-SYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAAEKGAPTGFI  586 (636)
Q Consensus       508 e~~~s~fk~LY~~~~~L~eKIetIA~-IYGA~~V~~S~~A~kqLk~ie~lG~~~LPVCmAKTqySlSdDp~l~G~P~gf~  586 (636)
                      +  +++|+|||++++||+|||++||+ ||||++|+||++|++||++||++||++||||||||||||||||+++|+|+||+
T Consensus       417 e--~~~f~~lY~~~~~i~eKI~~Ia~~iYGA~~V~~s~~A~~~l~~~~~~G~~~lPvCmAKTqySlS~dp~~~G~P~gf~  494 (543)
T 3do6_A          417 K--DVEPAYLYEMNDPVEKKIEILAKEIYRAGRVEFSDTAKNALKFIKKHGFDELPVIVAKTPKSISHDPSLRGAPEGYT  494 (543)
T ss_dssp             C--CCCCCCSSCTTSCHHHHHHHHHHHTSCCSEEEECHHHHHHHHHHHHTTCTTSCEEEECCSSSSSSCTTCCSCCCSCE
T ss_pred             c--CCCcccccCCCCCHHHHHHHHHHHHcCCCeEEECHHHHHHHHHHHhcCCCCCCEEEEccCcCcccCccccCCCCCce
Confidence            7  57899999999999999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeEEEeeCCCceEEeecCccccCCCCCCCCceeeeeeeCCCCeEeccC
Q 006673          587 LPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVGLS  636 (636)
Q Consensus       587 l~Vrdv~~~aGAGFival~G~ImtMPGLPk~Paa~~Idvd~~~G~I~GL~  636 (636)
                      ||||||++|+|||||||+||+|||||||||+|+|++|||| ++|+|+|||
T Consensus       495 ~~irdv~~saGAGFiv~l~G~i~tMPGLp~~Paa~~idvd-~~G~i~GLf  543 (543)
T 3do6_A          495 FVVSDLFVSAGAGFVVALSGDINLMPGLPKKPNALNMDVD-DSGNIVGVS  543 (543)
T ss_dssp             EEECEEEEETTTTEEEEECSCCCSSCCCCSSCGGGGCEEC-TTSCEESCC
T ss_pred             EEeeEEEEcCCCcEEEEEeCcceeCCCCCCCccceeCcCC-CCCCEeeCC
Confidence            9999999999999999999999999999999999999999 999999998

PyMOL of 3do6

>2eo2_A Adult MALE hypothalamus cDNA, riken FULL-length enriched library, clone:A230045M11...; FTHFSDC1, structural genomics, NPPSFA; NMR {Mus musculus}	Back alignment and structure

>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}	Back alignment and structure

>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*	Back alignment and structure

>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}	Back alignment and structure

>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}	Back alignment and structure

>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10	Back alignment and structure

>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*	Back alignment and structure

>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}	Back alignment and structure

>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*	Back alignment and structure

>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A	Back alignment and structure

>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}	Back alignment and structure

>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*	Back alignment and structure

>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*	Back alignment and structure

>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A	Back alignment and structure

>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*	Back alignment and structure

>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*	Back alignment and structure

>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*	Back alignment and structure

>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*	Back alignment and structure

>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*	Back alignment and structure

>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}	Back alignment and structure

>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*	Back alignment and structure

>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}	Back alignment and structure

>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}	Back alignment and structure

>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}	Back alignment and structure

>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*	Back alignment and structure

>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*	Back alignment and structure

>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10	Back alignment and structure

>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*	Back alignment and structure

>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*	Back alignment and structure

>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}	Back alignment and structure

>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}	Back alignment and structure

>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}	Back alignment and structure

>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A	Back alignment and structure

>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A	Back alignment and structure

>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*	Back alignment and structure

>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}	Back alignment and structure

>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A	Back alignment and structure

>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A	Back alignment and structure

>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}	Back alignment and structure

>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A	Back alignment and structure

>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*	Back alignment and structure

>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9	Back alignment and structure

>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A	Back alignment and structure

>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}	Back alignment and structure

>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4	Back alignment and structure

>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*	Back alignment and structure

>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}	Back alignment and structure

>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*	Back alignment and structure

>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*	Back alignment and structure

>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}	Back alignment and structure

>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10	Back alignment and structure

>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*	Back alignment and structure

>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}	Back alignment and structure

>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A	Back alignment and structure

>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10	Back alignment and structure

>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A	Back alignment and structure

>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*	Back alignment and structure

>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*	Back alignment and structure

>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}	Back alignment and structure

>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*	Back alignment and structure

>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}	Back alignment and structure

>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*	Back alignment and structure

>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1	Back alignment and structure

>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C	Back alignment and structure

>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}	Back alignment and structure

>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}	Back alignment and structure

>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}	Back alignment and structure

>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...	Back alignment and structure

>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}	Back alignment and structure

>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A	Back alignment and structure

>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*	Back alignment and structure

>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}	Back alignment and structure

>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}	Back alignment and structure

>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*	Back alignment and structure

>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		636
d1eg7a_		549	c.37.1.10 (A:) Formyltetrahydrofolate synthetase {	0.0

>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]} Length = 549	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Formyltetrahydrofolate synthetase
species: Moorella thermoacetica [TaxId: 1525]

 Score =  696 bits (1799), Expect = 0.0
 Identities = 285/617 (46%), Positives = 370/617 (59%), Gaps = 69/617 (11%)

Query: 19  DIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGIT 78
           DI+IA + +   + E+A+ L ++ +  +LYGKYKAK+ L V   L+   DG  ++V  IT
Sbjct: 1   DIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDKPDGKLILVTAIT 60

Query: 79  PTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEF 138
           PTP GEGK+TT+VGL  AL   L K+V+ CLR+PS GP+FGIKGGAAGGGY+QV+PM++ 
Sbjct: 61  PTPAGEGKTTTSVGLTDALAR-LGKRVMVCLREPSLGPSFGIKGGAAGGGYAQVVPMEDI 119

Query: 139 NLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRL 198
           NLH TGDIHA+T A+NLLAA +D  +                                  
Sbjct: 120 NLHFTGDIHAVTYAHNLLAAMVDNHLQQGN------------------------------ 149

Query: 199 KKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVR 258
                                  L+IDP +ITWRRV+D+N+R LR I IG G +  G+ R
Sbjct: 150 ----------------------VLNIDPRTITWRRVIDLNERALRNIVIGLGGKANGVPR 187

Query: 259 ETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKD 318
           ETGFDISVASE+MA L L + L D++ER  + V+G +  G P+TA DL   G++ +LMKD
Sbjct: 188 ETGFDISVASEVMACLCLASDLMDLKERFSRKVVGYTYDGKPVTAGDLEAQGSMALLMKD 247

Query: 319 AINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGA 378
           AI P L+QTLE TP  +H GPFANIAHG +SI+A K ALKL     +VVTEAGFGAD+GA
Sbjct: 248 AIKPNLVQTLENTPAFIHGGPFANIAHGCNSIIATKTALKL---ADYVVTEAGFGADLGA 304

Query: 379 EKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAYLNENVALVEAGCVN 438
           EKF ++KCRY+G  P   VIVAT+RALKMHGG P              EN+  +  G  N
Sbjct: 305 EKFYDVKCRYAGFKPDATVIVATVRALKMHGGVP--------KSDLATENLEALREGFAN 356

Query: 439 LARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVD 498
           L +HI N   +G   VVA+N F TD++AELN +      A    A V    A GG+G ++
Sbjct: 357 LEKHIENIGKFGVPAVVAINAFPTDTEAELNLLYELCAKA---GAEVALSWAKGGEGGLE 413

Query: 499 LGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIARS-YGASGVEYSEEAEKQIEMYTGQG 557
           L   V +  E+       LY LD+SIK+KI  IA   YGA GV Y+ EA+K I+ Y   G
Sbjct: 414 LARKVLQTLESRPSNFHVLYNLDLSIKDKIAKIATEIYGADGVNYTAEADKAIQRYESLG 473

Query: 558 FSGLPICMAKTQYSFSHNAAEKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTR 617
           +  LP+ MAKTQYSFS +  + G P  F + +R+VR S G   I P+ G + TMPGLP R
Sbjct: 474 YGNLPVVMAKTQYSFSDDMTKLGRPRNFTITVREVRLSAGGRLIVPITGAIMTMPGLPKR 533

Query: 618 PCFYEIDVDTATGKVVG 634
           P    ID+D A G + G
Sbjct: 534 PAACNIDID-ADGVITG 549

PyMOL of d1eg7a_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		636
d1eg7a_		549	Formyltetrahydrofolate synthetase {Moorella thermo	100.0
d1byia_		224	Dethiobiotin synthetase {Escherichia coli [TaxId:	97.0
d1g3qa_		237	Cell division regulator MinD {Archaeon Pyrococcus	96.0
d1hyqa_		232	Cell division regulator MinD {Archaeon Archaeoglob	95.69
d1ihua1		296	Arsenite-translocating ATPase ArsA {Escherichia co	95.65
d4tmka_		210	Thymidylate kinase {Escherichia coli [TaxId: 562]}	94.89
d1ihua2		279	Arsenite-translocating ATPase ArsA {Escherichia co	94.53
d2i3ba1		189	Cancer-related NTPase, C1orf57 {Human (Homo sapien	92.93
d1nn5a_		209	Thymidylate kinase {Human (Homo sapiens) [TaxId: 9	92.71
d2afhe1		289	Nitrogenase iron protein {Azotobacter vinelandii [	92.25
d1m8pa3		183	ATP sulfurylase C-terminal domain {Fungus (Penicil	92.06
d1cp2a_		269	Nitrogenase iron protein {Clostridium pasteurianum	90.7
d1mkya1		171	Probable GTPase Der, N-terminal and middle domains	90.33
d1wb1a4		179	Elongation factor SelB, N-terminal domain {Methano	89.12
d1rz3a_		198	Hypothetical protein rbstp0775 {Bacillus stearothe	88.76
d1nksa_		194	Adenylate kinase {Archaeon Sulfolobus acidocaldari	88.46
d1b5ta_		275	Methylenetetrahydrofolate reductase {Escherichia c	88.44
d1qhxa_		178	Chloramphenicol phosphotransferase {Streptomyces v	87.07
d1y63a_		174	Probable kinase LmjF30.1890 {Leishmania major [Tax	86.96
d1gsia_		208	Thymidylate kinase {Mycobacterium tuberculosis [Ta	86.8
d1p9ra_		401	Extracellular secretion NTPase EpsE {Vibrio choler	86.58
d1tmka_		214	Thymidylate kinase {Baker's yeast (Saccharomyces c	86.51
d2bdta1		176	Hypothetical protein BH3686 {Bacillus halodurans [	86.5
d1kaga_		169	Shikimate kinase (AroK) {Escherichia coli [TaxId:	86.37
d1zp6a1		176	Hypothetical protein Atu3015 {Agrobacterium tumefa	86.14
d1xjca_		165	Molybdopterin-guanine dinucleotide biosynthesis pr	85.88
d1knqa_		171	Gluconate kinase {Escherichia coli [TaxId: 562]}	85.13
d1khta_		190	Adenylate kinase {Archaeon Methanococcus voltae [T	84.6
d1lw7a2		192	Transcriptional regulator NadR, ribosylnicotinamid	84.57
d1okkd2		207	GTPase domain of the signal recognition particle r	83.13
d1htwa_		158	Hypothetical protein HI0065 {Haemophilus influenza	83.04
d1udxa2		180	Obg GTP-binding protein middle domain {Thermus the	82.08
d1svia_		195	Probable GTPase EngB {Bacillus subtilis [TaxId: 14	81.96
d1np6a_		170	Molybdopterin-guanine dinucleotide biosynthesis pr	81.43

>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Formyltetrahydrofolate synthetase
species: Moorella thermoacetica [TaxId: 1525]

Probab=100.00  E-value=5.6e-266  Score=2114.10  Aligned_cols=548  Identities=52%  Similarity=0.883  Sum_probs=541.0

Q ss_pred             hHHHHccCCCCCHHHHHHHcCCCCcccccccCeeeeeccchhhhccCCCCCcEEEEeecCCCCCCCCcchhHHHHHHHHh
Q 006673           19 DIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALG   98 (636)
Q Consensus        19 d~eia~~~~~~~I~~ia~~lgl~~~~l~~YG~~kAKi~~~~~~~~~~~~~gklilVTaitPTP~GEGKtTttIGL~~aL~   98 (636)
                      ||||||+++|+||++||+++||++|||||||+|||||+++++++++++|+|||||||||||||+|||||||||||+||| 
T Consensus         1 D~eIa~~~~~~~I~~ia~~~gl~~~~~~~yG~~kaKv~~~~~~~~~~~~~gklilVTaitPTp~GEGKtTttiGL~~aL-   79 (549)
T d1eg7a_           1 DIEIAQAAKMKPVMELARGLGIQEDEVELYGKYKAKISLDVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGLTDAL-   79 (549)
T ss_dssp             CCSTTCCCCCCCHHHHHHTTTCCGGGEEESSSSCEEECTHHHHHHTTSCCCEEEEEEESSCCTTCCCHHHHHHHHHHHH-
T ss_pred             ChhhHhhCCCCCHHHHHHHcCCCHHHHhhcCCcceEecHHHHHhhccCCCceEEEEEeCCCCCCCCCcceeHHhHHHHH-
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             hhcCCcEEEEeeCCCCCCccccccCCCCCCceeeecCccccccccchhhHHHHHHhHHHHHHHhhhhccccCChhHhhhc
Q 006673           99 AFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNR  178 (636)
Q Consensus        99 ~~lg~~~~~~lRePSlGP~FGiKGGAaGGGysqv~Pme~iNLHfTGD~hAItaA~NLlaA~idn~i~~~n~~~~~~~~~~  178 (636)
                      +|+||++++|||||||||||||||||||||||||+|||||||||||||||||||||||+|+|||||||+|          
T Consensus        80 ~~lgk~~~~~lRePSlGP~fGiKGGAaGGG~sqv~Pme~inLhftGD~hAitaA~NLl~A~idn~i~~gn----------  149 (549)
T d1eg7a_          80 ARLGKRVMVCLREPSLGPSFGIKGGAAGGGYAQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQGN----------  149 (549)
T ss_dssp             HHTTCCEEEEECCCCSTHHHHTTCCCSEETTEEEECHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHHTTC----------
T ss_pred             HHhCCceEEEEecCCCCCccccccCCCCCCeeeeecchhhhcccCCcHHHHHHHHHHHHHHHHhhhcccc----------
Confidence            6999999999999999999999999999999999999999999999999999999999999999999999          


Q ss_pred             cCCCCCcCCcchhHHHHHHHHhhcCCCCCCCCCCHHHHhhhccCCCCCCceeeeecccccccccceeeeccCCCCCCcce
Q 006673          179 LCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVR  258 (636)
Q Consensus       179 l~~~~~~~~r~~~~~~~~rl~~~~i~~~~p~~l~~~~~~~~~~L~IDp~~I~w~Rv~D~NDR~LR~I~iGlg~~~~G~~r  258 (636)
                                                                +|+|||++|+||||||||||+||+|+||+|++.+|+||
T Consensus       150 ------------------------------------------~L~iDp~~I~w~Rv~D~NDR~LR~i~vglgg~~~G~~r  187 (549)
T d1eg7a_         150 ------------------------------------------VLNIDPRTITWRRVIDLNERALRNIVIGLGGKANGVPR  187 (549)
T ss_dssp             ------------------------------------------TTCBCGGGCCCCEEESSCCGGGSSEEESCSSTTSCCCE
T ss_pred             ------------------------------------------cCCCCCceeeeceeecchhhhhhheEEeccccCCCcce
Confidence                                                      79999999999999999999999999999999999999


Q ss_pred             ecceeEeehhhHHHHHHccCCHHHHHHHhcCcEEeecCCCCceeecccccchhHHHHhhhccCcCceeeecCceeEEccc
Q 006673          259 ETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAG  338 (636)
Q Consensus       259 ~~gFdITvASEiMAIl~La~~l~Dlk~Rl~~ivva~~~~g~Pvta~DL~~~GAm~~LLkdAlkPNLvQTlEgtPa~VHgG  338 (636)
                      |+|||||||||||||||||+|++|||+||||||||||+||+||||+||+++||||+|||||||||||||+||||||||||
T Consensus       188 ~~gFdIT~ASEvMAIl~La~~l~DLr~Rlg~ivv~~~~~g~pv~a~DL~~~GAm~~LLkdAi~PNLvQT~EgtPa~vHgG  267 (549)
T d1eg7a_         188 ETGFDISVASEVMACLCLASDLMDLKERFSRKVVGYTYDGKPVTAGDLEAQGSMALLMKDAIKPNLVQTLENTPAFIHGG  267 (549)
T ss_dssp             EECEEEGGGSHHHHHHHHCSSHHHHHHHHHTCEEEEBTTSCEEETGGGTCHHHHHHHTTTTTSCEEEEETTCCEEEECCC
T ss_pred             ecccccchhhhheeeeeecCCHHHHHHhhcCEEeeecCCCCCcchhhcccchhHHHHHHHHHHhhhheeccCCceeeecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccccCCchHHHHHHHHhhcCCCCeEEeeccccccccchhccccccccCCCCcceEEEEeeehhhhhcCCCCCccCCC
Q 006673          339 PFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGK  418 (636)
Q Consensus       339 PFANIAhG~nSviAt~~aLklag~~dyvVTEAGFGaDlGaEKF~dIkcr~~gl~P~avVlVaTvRALK~HGG~~~~~~g~  418 (636)
                      |||||||||||||||++||+|+   ||||||||||||||||||||||||++|++|||+|||||+||||||||+++     
T Consensus       268 PFANIAhG~nSviAt~~al~la---dyvVTEAGFGaDlGaEKF~dIkcr~~gl~P~~~VlVaTvRALK~HGG~~~-----  339 (549)
T d1eg7a_         268 PFANIAHGCNSIIATKTALKLA---DYVVTEAGFGADLGAEKFYDVKCRYAGFKPDATVIVATVRALKMHGGVPK-----  339 (549)
T ss_dssp             CCSSSSCCBCCHHHHHHHHHHC---SEEEEEBSSCTTTHHHHHHHTHHHHHTCCCCEEEEEECHHHHHHTTTCCG-----
T ss_pred             CccccccccchHHHHHHHhhcC---CeEEEeccccCCccchhhhccccccCCCCCceEEEEeehhhhhhcCCCCh-----
Confidence            9999999999999999999999   99999999999999999999999999999999999999999999999986     


Q ss_pred             CCcccccccCHHHHHHHHhHHHHHHHHHhhcCCcEEEEecCCCCCCHHHHHHHHHHHHHcCCCeEEEcCccccCccchhH
Q 006673          419 PLDHAYLNENVALVEAGCVNLARHIANTKAYGANVVVAVNMFATDSKAELNAVRNAAMAAGAFDAVVCSHHAHGGKGAVD  498 (636)
Q Consensus       419 pL~~~l~~eNleaL~~G~~NL~kHIeNi~~fGvPvVVAINrF~tDT~aEI~~v~e~c~~~Gv~~~avs~~wa~GGeGa~e  498 (636)
                         ++|.+||++||++||+||+|||||+++||+|||||||+|++||++||++|+++|++.|++   +|.||++||+|++|
T Consensus       340 ---~~l~~eNl~Al~~G~~NL~rHIeNi~~fGlpvVVAIN~F~tDTd~Ei~~i~~~~~~~g~~---~a~~wa~GG~Ga~d  413 (549)
T d1eg7a_         340 ---SDLATENLEALREGFANLEKHIENIGKFGVPAVVAINAFPTDTEAELNLLYELCAKAGAE---VALSWAKGGEGGLE  413 (549)
T ss_dssp             ---GGTTSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCTTCCHHHHHHHHHHTTTSEEE---EECCTTTGGGGGHH
T ss_pred             ---HHcCcccHHHHHHHHHHHHHHHHhhhhcCCCeEEEeccCCccchhHHHHHHHHHhhcCcc---eeeecccCccchHH
Confidence               789999999999999999999999999999999999999999999999999999999875   46789999999999


Q ss_pred             HHHHHHHHhhcCCCCCcccCCCCCCHHHHHHHHHH-HhCCCceeeCHHHHHHHHHHHhCCCCCCCeeEeecCCCCCCCCC
Q 006673          499 LGIAVQRACENVTQPLKFLYPLDVSIKEKIDTIAR-SYGASGVEYSEEAEKQIEMYTGQGFSGLPICMAKTQYSFSHNAA  577 (636)
Q Consensus       499 LA~aVv~a~e~~~s~fk~LY~~~~~L~eKIetIA~-IYGA~~V~~S~~A~kqLk~ie~lG~~~LPVCmAKTqySlSdDp~  577 (636)
                      ||++|+++|++.+++|+|||++++||+|||++||+ ||||++|+||++|++||++||++||++||||||||||||||||+
T Consensus       414 LA~~Vv~a~e~~~~~f~~LY~~~~~l~eKIe~IA~~IYGA~~V~~S~~A~kqL~~~e~~G~~~LPVCmAKTqySfS~Dp~  493 (549)
T d1eg7a_         414 LARKVLQTLESRPSNFHVLYNLDLSIKDKIAKIATEIYGADGVNYTAEADKAIQRYESLGYGNLPVVMAKTQYSFSDDMT  493 (549)
T ss_dssp             HHHHHHHHHHHSCCCCCCSSCTTSCHHHHHHHHHHHTTCCSEEEECHHHHHHHHHHHHTTCTTSCEEEECCTTSSSSCTT
T ss_pred             HHHHHHHHHhcccccccccCCccchHHHHHHHHHHHhcCCCceeeCHHHHHHHHHHHHCCCCCCCEEEEeCCCCcCCCcc
Confidence            99999999987778999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEeeEEEeeCCCceEEeecCccccCCCCCCCCceeeeeeeCCCCeEec
Q 006673          578 EKGAPTGFILPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYEIDVDTATGKVVG  634 (636)
Q Consensus       578 l~G~P~gf~l~Vrdv~~~aGAGFival~G~ImtMPGLPk~Paa~~Idvd~~~G~I~G  634 (636)
                      ++|+|+||+|||||||+|+||||||++||+|||||||||+|||++|||| ++|+|+|
T Consensus       494 l~GaP~gf~l~VrevrlsaGAGFiV~i~G~ImTMPGLPk~PaA~~Idid-~~G~I~G  549 (549)
T d1eg7a_         494 KLGRPRNFTITVREVRLSAGGRLIVPITGAIMTMPGLPKRPAACNIDID-ADGVITG  549 (549)
T ss_dssp             CCSCCCSCEEEECCCEEETTTEEEEECSSTTCCSCCCCSSCGGGTCEEC-SSSEECC
T ss_pred             cCCCCCCCeEEeeEEEEcCCceEEEEEecccccCCCCCCCccccccccC-CCCCeeC
Confidence            9999999999999999999999999999999999999999999999999 8999998

PyMOL of d1eg7a_

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}	Back information, alignment and structure

>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}	Back information, alignment and structure

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}	Back information, alignment and structure

>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}	Back information, alignment and structure

>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}	Back information, alignment and structure

>d1b5ta_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}	Back information, alignment and structure

>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}	Back information, alignment and structure

>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure

>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}	Back information, alignment and structure

>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}	Back information, alignment and structure

>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}	Back information, alignment and structure

>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}	Back information, alignment and structure