Citrus Sinensis ID: 006689

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-----
MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIAMEKVYQKGTTKPAKVLSDGLYSYCNGVQV
cEEEEEccccccccccHHHHHHcccccEEEEcccccEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccEEEcccccHHHHHHHHHHHccccccccccccEEEEEccccccccccccHHHHHHHHHcccccccEEEEEEcccccccccccccccccHHHHHHHHHccccccEEEEcccccccHHHHHHHHcccccccccEEEccccccHHHHcHHHHHcccHHHHHHHcccccccccccHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHcccccccccccccccccccEEEEcccccccccccccccccccEEEccccHHHHHHHcccccccccccccccccHHHHHHHHHcccEEEEEcccccEEEEEEEccccEEEEcccccccccccccccccHHHHHHHHHHcHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
cEEEEEcHcHHHHccccHHHHHcccccEEEEcccccEEEEEEccEEEEEccHHHHHHHHHHHHcccEEEEEEEccEEEccccccccccccEEEEEcccccEcccccccEEEEEEcccccccccccHHHHHHHHHHcccccccccEEEEcccHHHHHHHHHHHHccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHcccccEEEEEEEEcccHHHcccccccccccHHHHHHHccccccEEEEEccccccHHHHHHHHHHccccHHHEEEccccccHHHcHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHHcccccEEEEEEEEEEcccHHHHHHHHHHHHHcccccccEEEEEEEcHHccHccHcccHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHccccEHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccccccccEEcccccEEEEccccHHHHHHcccHHHHHHccccEEccHHHHHHHHHcccEEEEccccccEEEEEEcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccccccccEccEEcccccccc
MIFFFFGlskisflgfkpflqqlkcptfllyapLNLQYMFLCLNECACINFFSLFLVQncqyhpnthfnlfgldpylntdagtmspfehgevfvlddggevdldlgnyerFMDIKltrdnnittgkIYQSVIDkerkgdylgktvqvVPHITDEIQDWIERVamipvdgkegpVDVCVIElggtigdiesmPFIEALGQfsyrvgpgnfcLIHVSLVpvlnvvgeqktkptqhsvrglrgqgltpnilacrstvalddnvkgklsqfchvpeqniitlydvpniwhiplllrDQKAHEAIFKVLNlqgttkepllkEWTSRaeicdglhepvRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIdwipacdledatekenpDAYKAAWKLLkgadgilvpggfgnrgvQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLnlrdanstefdpntknpcvifmpegskthmggtmrlgsrrtyfqikdcksaklygnrtfiderhrhryevNPDMIARLENaglsftgkdetsqrmeivelpnhpyfigvqfhpeyksrpgkpsplFLGLIAAACGQLdtliqgsgsqgnlsaklgnGIAMEKVyqkgttkpakvlsdglysycngvqv
MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMdikltrdnnittgkiyqsvidkerkgdylgktvqvvphITDEIQDWIERVAMIpvdgkegpVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKtkptqhsvrglrgqgltpnILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLnlqgttkepllKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACdledatekeNPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDAnstefdpntknpcVIFMPEGSKTHMGGTMRLGSRRTYFQikdcksaklygnrtfiderhrhrYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIAMEKVYQKGTtkpakvlsdglysycngvqv
MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHgevfvlddggevdldlgNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIAMEKVYQKGTTKPAKVLSDGLYSYCNGVQV
*IFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQ********VRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFD*NTKNPCVIFMPE****HMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFT********MEIVELPNHPYFIGVQFHPEYK******SPLFLGLIAAACGQLDTLIQGS*****LSAKLGNGIAMEKVYQKGTTKPAKVLSDGLYSYCN****
MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG*******************************************LYSYC*****
MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQ***********LRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIAMEKVYQKGTTKPAKVLSDGLYSYCNGVQV
MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKT***QHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQ**********IAMEKV****TTKPAKVLSDGLYSYCNGV*V
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iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIFFFFGLSKISFLGFKPFLQQLKCPTFLLYAPLNLQYMFLCLNECACINFFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIAMEKVYQKGTTKPAKVLSDGLYSYCNGVQV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query635 2.2.26 [Sep-21-2011]
Q54V77569 CTP synthase OS=Dictyoste yes no 0.807 0.901 0.583 1e-180
Q7ZXP9591 CTP synthase 1-B OS=Xenop N/A no 0.826 0.888 0.574 1e-179
Q5XHA8591 CTP synthase 1-A OS=Xenop N/A no 0.826 0.888 0.576 1e-178
Q6PEI7591 CTP synthase 1 OS=Danio r yes no 0.823 0.884 0.566 1e-178
Q1RMS2586 CTP synthase 2 OS=Bos tau yes no 0.815 0.883 0.575 1e-177
P70698591 CTP synthase 1 OS=Mus mus yes no 0.822 0.883 0.575 1e-176
P17812591 CTP synthase 1 OS=Homo sa yes no 0.822 0.883 0.573 1e-175
Q6GME1578 CTP synthase 2 OS=Xenopus N/A no 0.809 0.889 0.570 1e-175
Q9NRF8586 CTP synthase 2 OS=Homo sa no no 0.814 0.882 0.571 1e-174
Q5F3Z1586 CTP synthase 2 OS=Gallus no no 0.814 0.882 0.569 1e-173
>sp|Q54V77|PYRG_DICDI CTP synthase OS=Dictyostelium discoideum GN=ctps PE=3 SV=1 Back     alignment and function desciption
 Score =  631 bits (1627), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 311/533 (58%), Positives = 387/533 (72%), Gaps = 20/533 (3%)

Query: 73  LDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVI 132
           +DPYLN DAGTMSPFEHGEVFVLDDGGEVDLDLGNYERF+D+ L +DNNITTGKIY  VI
Sbjct: 39  IDPYLNIDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVNLGKDNNITTGKIYNLVI 98

Query: 133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
           +KERKG YLGKTVQVVPHIT+EIQ+WIERVA +PVDG +G  DVCVIELGGT+GDIESMP
Sbjct: 99  EKERKGQYLGKTVQVVPHITEEIQNWIERVAHLPVDGDKGTPDVCVIELGGTVGDIESMP 158

Query: 193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
           F EAL QF +RVG  NFCL+HVSLVPVL VVGEQKTKP+Q S+R LR  GL+P+   CRS
Sbjct: 159 FTEALRQFQFRVGVENFCLMHVSLVPVLGVVGEQKTKPSQQSIRELRSLGLSPDFCLCRS 218

Query: 253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ----- 307
           T  L +  K K+S FCHV   N+I ++DV NI+ +P+LL  Q     + + L L      
Sbjct: 219 TQPLTEETKKKISLFCHVAPDNVIGVHDVSNIYRVPILLNQQNLPNLVLRRLQLNPKVDL 278

Query: 308 -----GTTKEPLLKEWTSRAEICDGLH----EPVRIAMVGKYTGLSDAYLSILKALLHAS 358
                  +    +  W   A+  D +      P+RIAMVGKYTGL+DAYLS++KAL HAS
Sbjct: 279 SKTSPSESTPYWMASWKGLADRMDKITNESLNPIRIAMVGKYTGLTDAYLSVIKALDHAS 338

Query: 359 VDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAA 418
           + + +K+VIDW+ A +LE  T+  +   YK +W++L+GA GILVPGGFG+RG++G IL A
Sbjct: 339 MAIERKMVIDWVEASNLE--TQNSSTAEYKKSWEMLRGAHGILVPGGFGDRGIEGMILTA 396

Query: 419 KYAREHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPN-TKNPCVIFMPEGSKTHM 477
            YAR    P+LGICLG+Q+AVIE+AR+V+   +ANS EF  + +    V+FMPE SKTHM
Sbjct: 397 NYARTSGKPFLGICLGLQIAVIEYARNVMGWENANSEEFSASGSGKNVVVFMPEVSKTHM 456

Query: 478 GGTMRLGSRRTYFQIKDCKSAKLYGNRTF---IDERHRHRYEVNPDMIARLENAGLSFTG 534
           GGTMRLGSR T F   D K +KLY        ++ERHRHRYEVNP+++  +   GL F G
Sbjct: 457 GGTMRLGSRDTIFTDVDNKISKLYNVDKVGQAVEERHRHRYEVNPEVVDEIHAKGLHFVG 516

Query: 535 KDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTL 587
           KD T  RMEIVEL +H Y++  QFHPE+KSRP +PSP F+GL+ A+  +L  +
Sbjct: 517 KDTTGVRMEIVELKDHDYYVACQFHPEFKSRPQRPSPPFIGLLNASLERLKKM 569
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
Dictyostelium discoideum (taxid: 44689)
EC: 6EC: .EC: 3EC: .EC: 4EC: .EC: 2
>sp|Q7ZXP9|PYG1B_XENLA CTP synthase 1-B OS=Xenopus laevis GN=ctps1-b PE=2 SV=1 Back     alignment and function description
>sp|Q5XHA8|PYG1A_XENLA CTP synthase 1-A OS=Xenopus laevis GN=ctps1-a PE=2 SV=1 Back     alignment and function description
>sp|Q6PEI7|PYRG1_DANRE CTP synthase 1 OS=Danio rerio GN=ctps1 PE=1 SV=1 Back     alignment and function description
>sp|Q1RMS2|PYRG2_BOVIN CTP synthase 2 OS=Bos taurus GN=CTPS2 PE=2 SV=1 Back     alignment and function description
>sp|P70698|PYRG1_MOUSE CTP synthase 1 OS=Mus musculus GN=Ctps1 PE=1 SV=2 Back     alignment and function description
>sp|P17812|PYRG1_HUMAN CTP synthase 1 OS=Homo sapiens GN=CTPS1 PE=1 SV=2 Back     alignment and function description
>sp|Q6GME1|PYRG2_XENLA CTP synthase 2 OS=Xenopus laevis GN=ctps2 PE=2 SV=1 Back     alignment and function description
>sp|Q9NRF8|PYRG2_HUMAN CTP synthase 2 OS=Homo sapiens GN=CTPS2 PE=1 SV=1 Back     alignment and function description
>sp|Q5F3Z1|PYRG2_CHICK CTP synthase 2 OS=Gallus gallus GN=CTPS2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
224072427595 predicted protein [Populus trichocarpa] 0.874 0.932 0.821 0.0
356526673603 PREDICTED: CTP synthase-like [Glycine ma 0.885 0.932 0.815 0.0
357517335608 CTP synthase like protein [Medicago trun 0.864 0.902 0.814 0.0
224057884605 predicted protein [Populus trichocarpa] 0.874 0.917 0.796 0.0
225424956605 PREDICTED: CTP synthase 1 [Vitis vinifer 0.886 0.930 0.814 0.0
225462352595 PREDICTED: CTP synthase [Vitis vinifera] 0.874 0.932 0.808 0.0
449433445602 PREDICTED: CTP synthase-like [Cucumis sa 0.885 0.933 0.786 0.0
224109142605 predicted protein [Populus trichocarpa] 0.881 0.925 0.788 0.0
297851536600 hypothetical protein ARALYDRAFT_473316 [ 0.875 0.926 0.790 0.0
356559159601 PREDICTED: CTP synthase-like [Glycine ma 0.885 0.935 0.802 0.0
>gi|224072427|ref|XP_002303728.1| predicted protein [Populus trichocarpa] gi|222841160|gb|EEE78707.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/565 (82%), Positives = 512/565 (90%), Gaps = 10/565 (1%)

Query: 73  LDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVI 132
           +DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERF+DIKLTRDNNITTGKIYQ+VI
Sbjct: 39  IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQAVI 98

Query: 133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
           DKER+GDYLGKTVQVVPHITD IQ+WIERVAMIPVDG+ GP DVCVIELGGTIGDIESMP
Sbjct: 99  DKERRGDYLGKTVQVVPHITDAIQEWIERVAMIPVDGQPGPADVCVIELGGTIGDIESMP 158

Query: 193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
           F EALGQFSYRVG GNFCL+HVSLVPVL+ VGEQKTKPTQHSVRGLR  GLTPNILACRS
Sbjct: 159 FTEALGQFSYRVGAGNFCLVHVSLVPVLSAVGEQKTKPTQHSVRGLRSLGLTPNILACRS 218

Query: 253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKE 312
           T+AL++NVK KLSQFCHVP +NIITLYDVPNIWH+PLLLRDQKAHEAI  VLNL G  +E
Sbjct: 219 TLALEENVKQKLSQFCHVPAENIITLYDVPNIWHLPLLLRDQKAHEAILGVLNLLGIARE 278

Query: 313 PLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA 372
           P +KEWTSRAE+CD L EPVRIA+VGKYTGLSD+YLS+LKALLHASV LRKKLV+DWIPA
Sbjct: 279 PNVKEWTSRAELCDMLLEPVRIAIVGKYTGLSDSYLSLLKALLHASVSLRKKLVVDWIPA 338

Query: 373 CDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432
            DLED T KENPD YKAAWKLLKG+DG+LVPGGFG+RGV+GKILAAKYARE+RIP+LGIC
Sbjct: 339 SDLEDETAKENPDVYKAAWKLLKGSDGVLVPGGFGDRGVEGKILAAKYARENRIPFLGIC 398

Query: 433 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQI 492
           LGMQ+AVIEFARS+L L+DANSTEFDP+TK+PCVIFMPEGSKTH+GGTMRLGSRRTYFQ+
Sbjct: 399 LGMQIAVIEFARSILGLQDANSTEFDPDTKDPCVIFMPEGSKTHLGGTMRLGSRRTYFQV 458

Query: 493 KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPY 552
            DCKSAKLYGNR FIDERHRHRYEVNPDM++RLE+AGLSFTGKDET QRMEIVELPNHPY
Sbjct: 459 MDCKSAKLYGNRGFIDERHRHRYEVNPDMVSRLEDAGLSFTGKDETGQRMEIVELPNHPY 518

Query: 553 FIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIAME-KVY 611
           +IG QFHPE+KSRPGKPS LFLGLIAAAC QLD+L+         + K+ NG+A +  + 
Sbjct: 519 YIGAQFHPEFKSRPGKPSALFLGLIAAACDQLDSLLH--------AHKIPNGMAKKISLC 570

Query: 612 QKG-TTKPAKVLSDGLYSYCNGVQV 635
           Q G  TK AK+ +DG+YS CNGV  
Sbjct: 571 QNGNATKFAKIPTDGIYSNCNGVHA 595

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356526673|ref|XP_003531941.1| PREDICTED: CTP synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|357517335|ref|XP_003628956.1| CTP synthase like protein [Medicago truncatula] gi|355522978|gb|AET03432.1| CTP synthase like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|224057884|ref|XP_002299372.1| predicted protein [Populus trichocarpa] gi|222846630|gb|EEE84177.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424956|ref|XP_002264587.1| PREDICTED: CTP synthase 1 [Vitis vinifera] gi|297738179|emb|CBI27380.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225462352|ref|XP_002265957.1| PREDICTED: CTP synthase [Vitis vinifera] gi|297736081|emb|CBI24119.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433445|ref|XP_004134508.1| PREDICTED: CTP synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224109142|ref|XP_002315098.1| predicted protein [Populus trichocarpa] gi|222864138|gb|EEF01269.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297851536|ref|XP_002893649.1| hypothetical protein ARALYDRAFT_473316 [Arabidopsis lyrata subsp. lyrata] gi|297339491|gb|EFH69908.1| hypothetical protein ARALYDRAFT_473316 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356559159|ref|XP_003547868.1| PREDICTED: CTP synthase-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
TAIR|locus:2196984600 AT1G30820 [Arabidopsis thalian 0.874 0.925 0.759 1e-233
TAIR|locus:2120357597 AT4G20320 [Arabidopsis thalian 0.875 0.931 0.740 1.6e-228
TAIR|locus:2087765591 emb2742 "embryo defective 2742 0.850 0.913 0.757 1.5e-227
TAIR|locus:2044707597 AT2G34890 [Arabidopsis thalian 0.812 0.864 0.718 2.9e-206
TAIR|locus:2132208556 AT4G02120 [Arabidopsis thalian 0.8 0.913 0.669 1e-187
DICTYBASE|DDB_G0280567569 ctps "CTP synthase" [Dictyoste 0.801 0.894 0.561 3.2e-152
UNIPROTKB|Q1RMS2586 CTPS2 "CTP synthase 2" [Bos ta 0.814 0.882 0.548 1.4e-151
ZFIN|ZDB-GENE-030131-808595 ctps1a "CTP synthase 1a" [Dani 0.823 0.878 0.534 4.7e-151
UNIPROTKB|A0JNE9591 CTPS "Uncharacterized protein" 0.822 0.883 0.544 1.2e-150
UNIPROTKB|E2RD29586 CTPS2 "Uncharacterized protein 0.812 0.880 0.549 1.2e-150
TAIR|locus:2196984 AT1G30820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2254 (798.5 bits), Expect = 1.0e-233, P = 1.0e-233
 Identities = 429/565 (75%), Positives = 481/565 (85%)

Query:    73 LDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFMDIKLTRDNNITTGKIYQSVI 132
             +DPYLNTDAGTMSPFEH                 NYERF+DIKLTRDNNITTGKIYQ VI
Sbjct:    39 IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQHVI 98

Query:   133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
              KERKGDYLGKTVQVVPH+TD IQDWIERVA+IPVDG+E P DVCVIELGGTIGDIES P
Sbjct:    99 AKERKGDYLGKTVQVVPHVTDAIQDWIERVAVIPVDGEEDPADVCVIELGGTIGDIESAP 158

Query:   193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
             FIEALGQFSYRVGPGNFCL+HVSLVPVLNVVGEQKTKPTQHSV+GLRG GLTP+ILACRS
Sbjct:   159 FIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVKGLRGLGLTPDILACRS 218

Query:   253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKE 312
             T  L+DNVK KL+QFCHVP + I TLYDVPNIW IPLLL+DQKAH AI KVLNL     E
Sbjct:   219 TKPLEDNVKEKLAQFCHVPLEYIFTLYDVPNIWRIPLLLKDQKAHLAISKVLNLASILNE 278

Query:   313 PLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA 372
             P L EWTSRAE+CD LH PVRIA+VGKYTGLSDAYLS+LKALLHASV  RKKLV+DW+PA
Sbjct:   279 PSLGEWTSRAELCDNLHVPVRIAVVGKYTGLSDAYLSVLKALLHASVACRKKLVVDWVPA 338

Query:   373 CDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432
             CDLE  TEKENPDAYKAAWKLLKG DGILVPGGFG+RGV+GKILAAKYARE++IP+LGIC
Sbjct:   339 CDLEKETEKENPDAYKAAWKLLKGVDGILVPGGFGDRGVEGKILAAKYARENKIPFLGIC 398

Query:   433 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQI 492
             LGMQ+AVIEFARSVL+L+DANSTEF+P TK+PC+IFMPEGSKTHMGGTMRLGSR++ F +
Sbjct:   399 LGMQIAVIEFARSVLSLQDANSTEFNPETKHPCIIFMPEGSKTHMGGTMRLGSRKSIFNV 458

Query:   493 KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPY 552
             KD KSAKLY N++F+DERHRHRYEVNPDM+ RLE AGLSF  KDET +RMEI+ELPNHP+
Sbjct:   459 KDSKSAKLYENKSFVDERHRHRYEVNPDMVERLEKAGLSFAAKDETGKRMEIIELPNHPF 518

Query:   553 FIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ-GSGSQGNLSAKLGNGIAMEKVY 611
             FIG QFHPE+KSRPGK SPLFLGLIAA+CG+LDT++   S  Q ++S    NG     ++
Sbjct:   519 FIGAQFHPEFKSRPGKASPLFLGLIAASCGELDTVLNPASAHQHSIS----NGPT--NIF 572

Query:   612 QKGTTKPA-KVLSDGLYS--YCNGV 633
               GT+K +   L+D  Y+  YCNG+
Sbjct:   573 INGTSKKSPNGLADVRYNNGYCNGL 597
GO:0003883 "CTP synthase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006221 "pyrimidine nucleotide biosynthetic process" evidence=IEA
TAIR|locus:2120357 AT4G20320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087765 emb2742 "embryo defective 2742" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044707 AT2G34890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132208 AT4G02120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280567 ctps "CTP synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q1RMS2 CTPS2 "CTP synthase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-808 ctps1a "CTP synthase 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A0JNE9 CTPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RD29 CTPS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
C5A7F1PYRG_THEGJ6, ., 3, ., 4, ., 20.52150.76370.9099yesno
Q8TKW5PYRG_METAC6, ., 3, ., 4, ., 20.51660.76370.9082yesno
Q6L1K7PYRG_PICTO6, ., 3, ., 4, ., 20.51370.75430.8970yesno
A6UTE4PYRG_META36, ., 3, ., 4, ., 20.50090.78420.9188yesno
Q7ZXP9PYG1B_XENLA6, ., 3, ., 4, ., 20.57410.82670.8883N/Ano
P70698PYRG1_MOUSE6, ., 3, ., 4, ., 20.57520.82200.8832yesno
A6ZQ59URA8_YEAS76, ., 3, ., 4, ., 20.52870.82200.9031N/Ano
B6YTF0PYRG_THEON6, ., 3, ., 4, ., 20.52350.76370.9099yesno
Q6PEI7PYRG1_DANRE6, ., 3, ., 4, ., 20.56670.82360.8849yesno
Q1RMS2PYRG2_BOVIN6, ., 3, ., 4, ., 20.5750.81570.8839yesno
Q8R720PYRG_THETN6, ., 3, ., 4, ., 20.50590.76690.9068yesno
Q5JGF1PYRG_PYRKO6, ., 3, ., 4, ., 20.51960.76370.9099yesno
Q8Q0L8PYRG_METMA6, ., 3, ., 4, ., 20.51460.76370.9082yesno
Q465Q4PYRG_METBF6, ., 3, ., 4, ., 20.50390.76530.9101yesno
P28274URA7_YEAST6, ., 3, ., 4, ., 20.55470.81250.8911yesno
Q9VUL1PYRG_DROME6, ., 3, ., 4, ., 20.55290.81250.8229yesno
Q12WH5PYRG_METBU6, ., 3, ., 4, ., 20.50980.76220.9063yesno
Q2M197PYRG_DROPS6, ., 3, ., 4, ., 20.51890.88500.8726yesno
Q5XHA8PYG1A_XENLA6, ., 3, ., 4, ., 20.57600.82670.8883N/Ano
Q9V1S2PYRG_PYRAB6, ., 3, ., 4, ., 20.50180.79680.9422yesno
O74638PYRG_GIBZE6, ., 3, ., 4, ., 20.51290.82990.9086yesno
Q8TYT7PYRG_METKA6, ., 3, ., 4, ., 20.50970.77630.9214yesno
Q6GME1PYRG2_XENLA6, ., 3, ., 4, ., 20.57000.80940.8892N/Ano
O42644PYRG_SCHPO6, ., 3, ., 4, ., 20.55470.80470.8516yesno
Q6LYU4PYRG_METMP6, ., 3, ., 4, ., 20.51150.77790.9268yesno
Q54V77PYRG_DICDI6, ., 3, ., 4, ., 20.58340.80780.9015yesno
P17812PYRG1_HUMAN6, ., 3, ., 4, ., 20.57330.82200.8832yesno
Q58574PYRG_METJA6, ., 3, ., 4, ., 20.52220.78420.9222yesno
Q8TZY6PYRG_PYRFU6, ., 3, ., 4, ., 20.50180.79370.9385yesno
Q7RZV2PYRG_NEUCR6, ., 3, ., 4, ., 20.53520.81100.9066N/Ano
Q751L7PYRG_ASHGO6, ., 3, ., 4, ., 20.54570.82040.9045yesno
Q6FUD0PYRG_CANGA6, ., 3, ., 4, ., 20.55090.81250.8927yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.3.40.921
3rd Layer6.3.5.2LOW CONFIDENCE prediction!
3rd Layer6.3.4.20.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
PLN02327557 PLN02327, PLN02327, CTP synthase 0.0
PRK05380533 PRK05380, pyrG, CTP synthetase; Validated 0.0
COG0504533 COG0504, PyrG, CTP synthase (UTP-ammonia lyase) [N 0.0
TIGR00337525 TIGR00337, PyrG, CTP synthase 0.0
pfam06418276 pfam06418, CTP_synth_N, CTP synthase N-terminus 1e-156
cd01746235 cd01746, GATase1_CTP_Synthase, Type 1 glutamine am 1e-141
cd03113255 cd03113, CTGs, CTP synthetase (CTPs) is a two-doma 1e-127
pfam00117186 pfam00117, GATase, Glutamine amidotransferase clas 6e-46
PRK06186229 PRK06186, PRK06186, hypothetical protein; Validate 5e-39
cd01653115 cd01653, GATase1, Type 1 glutamine amidotransferas 4e-10
cd0312892 cd03128, GAT_1, Type 1 glutamine amidotransferase 6e-09
COG0118204 COG0118, HisH, Glutamine amidotransferase [Amino a 1e-04
PRK13146209 PRK13146, hisH, imidazole glycerol phosphate synth 2e-04
PRK13181199 PRK13181, hisH, imidazole glycerol phosphate synth 2e-04
cd01748198 cd01748, GATase1_IGP_Synthase, Type 1 glutamine am 6e-04
PRK00758184 PRK00758, PRK00758, GMP synthase subunit A; Valida 0.001
PRK13143200 PRK13143, hisH, imidazole glycerol phosphate synth 0.004
cd01745189 cd01745, GATase1_2, Subgroup of proteins having th 0.004
>gnl|CDD|215186 PLN02327, PLN02327, CTP synthase Back     alignment and domain information 
 Score = 1159 bits (2999), Expect = 0.0
 Identities = 433/519 (83%), Positives = 473/519 (91%)

Query: 73  LDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVI 132
           +DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERF+D+ LTRDNNITTGKIYQSVI
Sbjct: 39  IDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVTLTRDNNITTGKIYQSVI 98

Query: 133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
           +KER+GDYLGKTVQVVPHITD IQ+WIERVA IPVDGKEGP DVCVIELGGT+GDIESMP
Sbjct: 99  EKERRGDYLGKTVQVVPHITDAIQEWIERVAKIPVDGKEGPADVCVIELGGTVGDIESMP 158

Query: 193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
           FIEAL QFS+RVGPGNFCLIHVSLVPVL VVGEQKTKPTQHSVRGLR  GLTP+ILACRS
Sbjct: 159 FIEALRQFSFRVGPGNFCLIHVSLVPVLGVVGEQKTKPTQHSVRGLRALGLTPHILACRS 218

Query: 253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKE 312
           T  L++NVK KLSQFCHVP +NI+ L+DV NIWH+PLLLRDQKAHEAI KVLNL    +E
Sbjct: 219 TKPLEENVKEKLSQFCHVPAENILNLHDVSNIWHVPLLLRDQKAHEAILKVLNLLSVARE 278

Query: 313 PLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWIPA 372
           P L+EWT+RAE CD L EPVRIAMVGKYTGLSD+YLS+LKALLHASV   +KLVIDW+ A
Sbjct: 279 PDLEEWTARAESCDNLTEPVRIAMVGKYTGLSDSYLSVLKALLHASVACSRKLVIDWVAA 338

Query: 373 CDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLGIC 432
            DLED T KE PDAY AAWKLLKGADGILVPGGFG+RGV+GKILAAKYARE+++PYLGIC
Sbjct: 339 SDLEDETAKETPDAYAAAWKLLKGADGILVPGGFGDRGVEGKILAAKYARENKVPYLGIC 398

Query: 433 LGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQI 492
           LGMQ+AVIEFARSVL L+DANSTEFDP T NPCVIFMPEGSKTHMGGTMRLGSRRTYFQ 
Sbjct: 399 LGMQIAVIEFARSVLGLKDANSTEFDPETPNPCVIFMPEGSKTHMGGTMRLGSRRTYFQT 458

Query: 493 KDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPY 552
            DCKSAKLYGN +F+DERHRHRYEVNP+M+ RLE AGLSF GKDET +RMEIVELP+HP+
Sbjct: 459 PDCKSAKLYGNVSFVDERHRHRYEVNPEMVPRLEKAGLSFVGKDETGRRMEIVELPSHPF 518

Query: 553 FIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGS 591
           F+GVQFHPE+KSRPGKPSPLFLGLIAAA GQLD ++  S
Sbjct: 519 FVGVQFHPEFKSRPGKPSPLFLGLIAAASGQLDAVLNSS 557

Length = 557
>gnl|CDD|235437 PRK05380, pyrG, CTP synthetase; Validated Back     alignment and domain information
>gnl|CDD|223578 COG0504, PyrG, CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|232926 TIGR00337, PyrG, CTP synthase Back     alignment and domain information
>gnl|CDD|219017 pfam06418, CTP_synth_N, CTP synthase N-terminus Back     alignment and domain information
>gnl|CDD|153217 cd01746, GATase1_CTP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>gnl|CDD|239387 cd03113, CTGs, CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain Back     alignment and domain information
>gnl|CDD|215729 pfam00117, GATase, Glutamine amidotransferase class-I Back     alignment and domain information
>gnl|CDD|180452 PRK06186, PRK06186, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|153210 cd01653, GATase1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|223196 COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|237290 PRK13146, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>gnl|CDD|183878 PRK13181, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>gnl|CDD|153219 cd01748, GATase1_IGP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>gnl|CDD|179112 PRK00758, PRK00758, GMP synthase subunit A; Validated Back     alignment and domain information
>gnl|CDD|237289 PRK13143, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>gnl|CDD|153216 cd01745, GATase1_2, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 635
KOG2387585 consensus CTP synthase (UTP-ammonia lyase) [Nucleo 100.0
COG0504533 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide 100.0
PLN02327557 CTP synthase 100.0
PRK05380533 pyrG CTP synthetase; Validated 100.0
TIGR00337525 PyrG CTP synthase. CTP synthase is involved in pyr 100.0
PF06418276 CTP_synth_N: CTP synthase N-terminus; InterPro: IP 100.0
cd03113255 CTGs CTP synthetase (CTPs) is a two-domain protein 100.0
PRK06186229 hypothetical protein; Validated 100.0
cd01746235 GATase1_CTP_Synthase Type 1 glutamine amidotransfe 100.0
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 100.0
PRK12564360 carbamoyl phosphate synthase small subunit; Review 100.0
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 100.0
PRK12838354 carbamoyl phosphate synthase small subunit; Review 100.0
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 100.0
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 100.0
KOG0370 1435 consensus Multifunctional pyrimidine synthesis pro 99.98
COG0118204 HisH Glutamine amidotransferase [Amino acid transp 99.95
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 99.94
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 99.93
PRK08007187 para-aminobenzoate synthase component II; Provisio 99.93
PLN02335222 anthranilate synthase 99.93
PRK05670189 anthranilate synthase component II; Provisional 99.92
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 99.92
COG2071243 Predicted glutamine amidotransferases [General fun 99.92
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 99.92
CHL00101190 trpG anthranilate synthase component 2 99.92
PRK06895190 putative anthranilate synthase component II; Provi 99.91
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 99.91
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 99.91
PRK06774191 para-aminobenzoate synthase component II; Provisio 99.9
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 99.9
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 99.9
PRK00758184 GMP synthase subunit A; Validated 99.9
PRK07765214 para-aminobenzoate synthase component II; Provisio 99.9
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 99.9
PRK08857193 para-aminobenzoate synthase component II; Provisio 99.89
PRK05637208 anthranilate synthase component II; Provisional 99.88
PLN02347 536 GMP synthetase 99.88
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 99.88
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 99.87
PRK03619219 phosphoribosylformylglycinamidine synthase I; Prov 99.87
PRK13566720 anthranilate synthase; Provisional 99.87
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 99.86
PF07722217 Peptidase_C26: Peptidase C26; InterPro: IPR011697 99.85
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 99.85
PRK00074 511 guaA GMP synthase; Reviewed 99.84
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 99.84
PRK13146209 hisH imidazole glycerol phosphate synthase subunit 99.84
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 99.84
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 99.83
PRK14004210 hisH imidazole glycerol phosphate synthase subunit 99.82
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 99.82
PLN02889 918 oxo-acid-lyase/anthranilate synthase 99.81
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 99.81
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 99.81
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 99.81
PRK13143200 hisH imidazole glycerol phosphate synthase subunit 99.8
PRK13142192 hisH imidazole glycerol phosphate synthase subunit 99.79
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 99.79
PRK06490239 glutamine amidotransferase; Provisional 99.77
PRK09065237 glutamine amidotransferase; Provisional 99.77
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 99.77
PLN02832248 glutamine amidotransferase subunit of pyridoxal 5' 99.76
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 99.76
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 99.76
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 99.75
PLN02617 538 imidazole glycerol phosphate synthase hisHF 99.75
PRK05665240 amidotransferase; Provisional 99.75
PRK07053234 glutamine amidotransferase; Provisional 99.75
PRK13525189 glutamine amidotransferase subunit PdxT; Provision 99.75
PRK07567242 glutamine amidotransferase; Provisional 99.73
TIGR01737227 FGAM_synth_I phosphoribosylformylglycinamidine syn 99.71
KOG0026223 consensus Anthranilate synthase, beta chain [Amino 99.71
KOG1224 767 consensus Para-aminobenzoate (PABA) synthase ABZ1 99.67
TIGR03800184 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl 99.67
PRK08250235 glutamine amidotransferase; Provisional 99.65
KOG0623 541 consensus Glutamine amidotransferase/cyclase [Amin 99.61
cd01749183 GATase1_PB Glutamine Amidotransferase (GATase_I) i 99.51
PRK13526179 glutamine amidotransferase subunit PdxT; Provision 99.37
PRK05368302 homoserine O-succinyltransferase; Provisional 99.34
PRK01175261 phosphoribosylformylglycinamidine synthase I; Prov 99.34
KOG1622 552 consensus GMP synthase [Nucleotide transport and m 99.33
cd01740238 GATase1_FGAR_AT Type 1 glutamine amidotransferase 99.27
KOG3179245 consensus Predicted glutamine synthetase [Nucleoti 99.24
COG0047231 PurL Phosphoribosylformylglycinamidine (FGAM) synt 99.15
COG0311194 PDX2 Predicted glutamine amidotransferase involved 99.1
PRK01077451 cobyrinic acid a,c-diamide synthase; Validated 99.09
PF01174188 SNO: SNO glutamine amidotransferase family; InterP 98.96
TIGR00379449 cobB cobyrinic acid a,c-diamide synthase. This mod 98.89
KOG1559340 consensus Gamma-glutamyl hydrolase [Coenzyme trans 98.84
PRK00784488 cobyric acid synthase; Provisional 98.82
TIGR00313475 cobQ cobyric acid synthase CobQ. 98.7
PF00988131 CPSase_sm_chain: Carbamoyl-phosphate synthase smal 98.69
PF13507259 GATase_5: CobB/CobQ-like glutamine amidotransferas 98.65
TIGR018571239 FGAM-synthase phosphoribosylformylglycinamidine sy 98.55
cd01750194 GATase1_CobQ Type 1 glutamine amidotransferase (GA 98.54
PRK052971290 phosphoribosylformylglycinamidine synthase; Provis 98.52
PRK13896433 cobyrinic acid a,c-diamide synthase; Provisional 98.47
PLN032061307 phosphoribosylformylglycinamidine synthase; Provis 98.36
PRK06278 476 cobyrinic acid a,c-diamide synthase; Validated 98.35
cd03130198 GATase1_CobB Type 1 glutamine amidotransferase (GA 98.3
TIGR017351310 FGAM_synt phosphoribosylformylglycinamidine syntha 98.24
KOG3210226 consensus Imidazoleglycerol-phosphate synthase sub 98.05
PF04204298 HTS: Homoserine O-succinyltransferase ; InterPro: 97.98
cd01653115 GATase1 Type 1 glutamine amidotransferase (GATase1 97.8
cd03144114 GATase1_ScBLP_like Type 1 glutamine amidotransfera 97.75
TIGR017391202 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM 97.67
cd03146212 GAT1_Peptidase_E Type 1 glutamine amidotransferase 97.65
TIGR01001300 metA homoserine O-succinyltransferase. The apparen 97.63
cd03131175 GATase1_HTS Type 1 glutamine amidotransferase (GAT 97.62
PHA033661304 FGAM-synthase; Provisional 97.61
PF07685158 GATase_3: CobB/CobQ-like glutamine amidotransferas 97.47
cd0312892 GAT_1 Type 1 glutamine amidotransferase (GATase1)- 97.44
PF09825367 BPL_N: Biotin-protein ligase, N terminal; InterPro 96.74
TIGR01382166 PfpI intracellular protease, PfpI family. The memb 96.61
PRK11780217 isoprenoid biosynthesis protein with amidotransfer 96.44
cd03133213 GATase1_ES1 Type 1 glutamine amidotransferase (GAT 96.23
cd03169180 GATase1_PfpI_1 Type 1 glutamine amidotransferase ( 95.92
PRK05282233 (alpha)-aspartyl dipeptidase; Validated 95.92
COG1797451 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme 95.55
cd03132142 GATase1_catalase Type 1 glutamine amidotransferase 95.41
cd03134165 GATase1_PfpI_like A type 1 glutamine amidotransfer 95.0
COG1492486 CobQ Cobyric acid synthase [Coenzyme metabolism] 94.69
cd03147231 GATase1_Ydr533c_like Type 1 glutamine amidotransfe 94.6
COG0693188 ThiJ Putative intracellular protease/amidase [Gene 94.22
PRK04155287 chaperone protein HchA; Provisional 93.94
PF01965147 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 T 93.8
TIGR01383179 not_thiJ DJ-1 family protein. This model represent 93.77
cd03137187 GATase1_AraC_1 AraC transcriptional regulators hav 93.26
cd03148232 GATase1_EcHsp31_like Type 1 glutamine amidotransfe 93.19
cd03129210 GAT1_Peptidase_E_like Type 1 glutamine amidotransf 93.05
cd03140170 GATase1_PfpI_3 Type 1 glutamine amidotransferase ( 92.85
cd03141221 GATase1_Hsp31_like Type 1 glutamine amidotransfera 92.52
cd03138195 GATase1_AraC_2 AraC transcriptional regulators hav 92.35
KOG19071320 consensus Phosphoribosylformylglycinamidine syntha 92.03
cd03135163 GATase1_DJ-1 Type 1 glutamine amidotransferase (GA 91.93
PRK11574196 oxidative-stress-resistance chaperone; Provisional 91.47
COG3442250 Predicted glutamine amidotransferase [General func 91.07
cd03139183 GATase1_PfpI_2 Type 1 glutamine amidotransferase ( 90.48
cd03136185 GATase1_AraC_ArgR_like AraC transcriptional regula 89.92
PF13278166 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3M 89.54
PRK11249752 katE hydroperoxidase II; Provisional 88.99
COG1897307 MetA Homoserine trans-succinylase [Amino acid tran 86.16
PRK09393322 ftrA transcriptional activator FtrA; Provisional 85.12
PRK09435332 membrane ATPase/protein kinase; Provisional 82.95
cd02037169 MRP-like MRP (Multiple Resistance and pH adaptatio 81.65
PRK00090222 bioD dithiobiotin synthetase; Reviewed 80.49
PRK13768253 GTPase; Provisional 80.4
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.6e-211  Score=1642.49  Aligned_cols=553  Identities=67%  Similarity=1.108  Sum_probs=543.8

Q ss_pred             CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCccc
Q 006689           36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYE  109 (635)
Q Consensus        36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~Ye  109 (635)
                      ||||+|||||+||||      |+|.|||+     +|++||+||||||||+|||||||||||||||||||||+||||||||
T Consensus         1 MKYVlVtGGVISGiGKGv~aSSiG~lLKs-----~Gl~VTsIKIDPYlN~DAGTmSPyEHGEVfVLDDGgEvDLDLGNYE   75 (585)
T KOG2387|consen    1 MKYVLVTGGVISGIGKGIIASSIGVLLKS-----CGLRVTSIKIDPYLNIDAGTMSPYEHGEVFVLDDGGEVDLDLGNYE   75 (585)
T ss_pred             CeEEEEeCcEeecccCceeehhHHHHHHh-----cCceeEEEEeccceeccCcccCccccceEEEecCCceecccccchh
Confidence            799999999999999      99999999     9999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccC
Q 006689          110 RFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIE  189 (635)
Q Consensus       110 Rfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdie  189 (635)
                      ||||++|||||||||||||++||+|||+|||||||||||||||||||+||+|+|+||||+++.+||||||||||||||||
T Consensus        76 Rfldi~Lt~dNNITtGKiy~~Vi~kER~GdYLGKTVQvvPHiTdaIq~WiervA~iPVdg~~~~pdVCvIELGGTvGDiE  155 (585)
T KOG2387|consen   76 RFLDITLTRDNNITTGKIYQHVIEKERRGDYLGKTVQVVPHITDAIQDWIERVARIPVDGTGGEPDVCVIELGGTVGDIE  155 (585)
T ss_pred             hhccceeeccCCcccchHHHHHHhhhhccccccceeEeccchhHHHHHHHHHHhcCCcCCCCCCCCEEEEEcCceecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhccccccCC
Q 006689          190 SMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCH  269 (635)
Q Consensus       190 s~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislfc~  269 (635)
                      ||||+||+||||+++|++|||+|||||||++++.|||||||||||||+||++|+.||+|+|||.++|..++|+|||+||+
T Consensus       156 s~pfveAl~qFq~~vg~~Nf~~iHVsLVp~l~~~gEqKTKPtQ~svr~LR~lGL~Pd~iaCRs~~~l~~~vk~Kis~FCh  235 (585)
T KOG2387|consen  156 SMPFVEALRQFQFKVGRENFCLIHVSLVPVLSVTGEQKTKPTQHSVRDLRGLGLSPDLIACRSTKPLEMSVKEKISMFCH  235 (585)
T ss_pred             ccHHHHHHHhheecccCCcEEEEEEEEEEeccccccccCcchHHHHHHHHhcCCCcceEEEccCCCCCHHHHHHHhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCCCCCC-ccchHHHHHHHHHhcCCCCccEEEEEeccCCCcchHH
Q 006689          270 VPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTK-EPLLKEWTSRAEICDGLHEPVRIAMVGKYTGLSDAYL  348 (635)
Q Consensus       270 v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~~~~~-~~~l~~W~~lv~~~~~~~~~v~IalVGkY~~l~DaY~  348 (635)
                      |+++||+++|||+++|+||++|++||+.+++.++|+|+.... .++|++|+.++++.++....++||+||||+.+.|+|.
T Consensus       236 V~~eqV~~~hDv~siyhvPllL~~q~~~e~l~~~L~L~~~~~~~~~l~~W~~~~~~~d~~~~~V~IalVGKYt~l~DsY~  315 (585)
T KOG2387|consen  236 VGPEQVVGLHDVSSIYHVPLLLEEQGIVEYLNRRLGLSIISSERPMLDKWSNMAERYDDLQVPVRIALVGKYTKLSDSYL  315 (585)
T ss_pred             cCHHHeeeeccCcchhcchHHHhhhhHHHHHHHHhCCCccccchhhHHHHHHHHHhhhcccCcEEEEEEeccccchHHHH
Confidence            999999999999999999999999999999999999975222 3699999999999999999999999999999999999


Q ss_pred             HHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcchhHHHHHHHHHHcCCCE
Q 006689          349 SILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPY  428 (635)
Q Consensus       349 SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~eg~i~air~are~~iP~  428 (635)
                      |+++||+|++++++.+++|.||+|++||+.+..++|.+||+||+.|+.+|||++|||||+||++|||.|++|||||++|+
T Consensus       316 Sv~KAL~Ha~~~~~~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGGFG~RGveG~i~Aak~ARen~iP~  395 (585)
T KOG2387|consen  316 SVVKALEHAALAINRKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGGFGDRGVEGKILAAKWARENKIPF  395 (585)
T ss_pred             HHHHHHHHHHHHhcccceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCCcccccchhHHHHHHHHHHhcCCCe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCCcCcCCCccccCceeEEEecCCchhhhccCCceeEE
Q 006689          429 LGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQIKDCKSAKLYGNRTFID  508 (635)
Q Consensus       429 LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~~~h~GgtmrLG~~~v~l~~~~sll~~iyg~~~~I~  508 (635)
                      ||||||||+++||||||+++++||+|+||+|++++|||.+|||.+..|||||||||.+++.|.+++|+++++||+...+.
T Consensus       396 LGiCLGmQ~AvIEfaRnvLg~~dAnStEF~p~~~~~vVi~MPE~~~~~mGgtMRLG~R~t~f~~~~s~~~kLYG~~~~V~  475 (585)
T KOG2387|consen  396 LGICLGMQLAVIEFARNVLGLKDANSTEFDPETKNPVVIFMPEHNKTHMGGTMRLGSRRTVFQDKDSKLRKLYGNVEFVD  475 (585)
T ss_pred             EeeehhhhHHHHHHHHHhhCCCCCCccccCCCCCCcEEEECcCCCcccccceeeecccceeeecCchHHHHHhCCchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999899999999999999


Q ss_pred             EEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhcchhhhh
Q 006689          509 ERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLI  588 (635)
Q Consensus       509 erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~~~~~~~  588 (635)
                      |||||||||||+++..||.+|+.|+|.+.+|.++|++|+++||||+|+||||||.|+|.+|+|+|.++++|+.+.+++++
T Consensus       476 ERHRHRyEVNP~~v~~le~~Gl~FvGkd~~g~rmeI~El~~HP~fVg~QfHPE~~srp~kpsp~flGlv~as~~~l~~~l  555 (585)
T KOG2387|consen  476 ERHRHRYEVNPEMVKQLEQAGLSFVGKDVTGKRMEIIELESHPFFVGVQFHPEFKSRPDKPSPLFLGLVAASCGRLDAYL  555 (585)
T ss_pred             hhhhcceecCHHHHHHHHhcCcEEEeecCCCcEEEEEEcCCCCceeeeccCHHHhcCCCCCCcchhHhHHHHHhhHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCC
Q 006689          589 QGSGS  593 (635)
Q Consensus       589 ~~~~~  593 (635)
                      ++.+.
T Consensus       556 ~~~~~  560 (585)
T KOG2387|consen  556 QRGCR  560 (585)
T ss_pred             ccccc
Confidence            98766

>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02327 CTP synthase Back     alignment and domain information
>PRK05380 pyrG CTP synthetase; Validated Back     alignment and domain information
>TIGR00337 PyrG CTP synthase Back     alignment and domain information
>PF06418 CTP_synth_N: CTP synthase N-terminus; InterPro: IPR017456 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism, catalysing the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position [] Back     alignment and domain information
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain Back     alignment and domain information
>PRK06186 hypothetical protein; Validated Back     alignment and domain information
>cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>COG2071 Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>KOG0623 consensus Glutamine amidotransferase/cyclase [Amino acid transport and metabolism] Back     alignment and domain information
>cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis Back     alignment and domain information
>PRK13526 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK05368 homoserine O-succinyltransferase; Provisional Back     alignment and domain information
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] Back     alignment and domain information
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase Back     alignment and domain information
>KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK00784 cobyric acid synthase; Provisional Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>PF00988 CPSase_sm_chain: Carbamoyl-phosphate synthase small chain, CPSase domain; InterPro: IPR002474 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Back     alignment and domain information
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase Back     alignment and domain information
>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>KOG3210 consensus Imidazoleglycerol-phosphate synthase subunit H-like [Coenzyme transport and metabolism] Back     alignment and domain information
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi Back     alignment and domain information
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) Back     alignment and domain information
>TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E Back     alignment and domain information
>TIGR01001 metA homoserine O-succinyltransferase Back     alignment and domain information
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) Back     alignment and domain information
>PHA03366 FGAM-synthase; Provisional Back     alignment and domain information
>PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] Back     alignment and domain information
>cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown Back     alignment and domain information
>TIGR01382 PfpI intracellular protease, PfpI family Back     alignment and domain information
>PRK11780 isoprenoid biosynthesis protein with amidotransferase-like domain; Provisional Back     alignment and domain information
>cd03133 GATase1_ES1 Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1 Back     alignment and domain information
>cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>PRK05282 (alpha)-aspartyl dipeptidase; Validated Back     alignment and domain information
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] Back     alignment and domain information
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases Back     alignment and domain information
>cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus Back     alignment and domain information
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] Back     alignment and domain information
>cd03147 GATase1_Ydr533c_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein Back     alignment and domain information
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] Back     alignment and domain information
>PRK04155 chaperone protein HchA; Provisional Back     alignment and domain information
>PF01965 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 This signature defines a diverse group of protein families which include proteins involved in RNA-protein interaction regulation, thiamine biosynthesis, Ras-related signal transduction, and those with protease activity Back     alignment and domain information
>TIGR01383 not_thiJ DJ-1 family protein Back     alignment and domain information
>cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31) Back     alignment and domain information
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins Back     alignment and domain information
>cd03140 GATase1_PfpI_3 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03141 GATase1_Hsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein Back     alignment and domain information
>cd03138 GATase1_AraC_2 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 Back     alignment and domain information
>PRK11574 oxidative-stress-resistance chaperone; Provisional Back     alignment and domain information
>COG3442 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03136 GATase1_AraC_ArgR_like AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PF13278 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3MGK_B 3NOV_A 3NON_B 3NOO_B 3NOQ_A 3NOR_A 3GRA_A 3EWN_A 3ER6_C Back     alignment and domain information
>PRK11249 katE hydroperoxidase II; Provisional Back     alignment and domain information
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09393 ftrA transcriptional activator FtrA; Provisional Back     alignment and domain information
>PRK09435 membrane ATPase/protein kinase; Provisional Back     alignment and domain information
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily Back     alignment and domain information
>PRK00090 bioD dithiobiotin synthetase; Reviewed Back     alignment and domain information
>PRK13768 GTPase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
3nva_A535 Dimeric Form Of Ctp Synthase From Sulfolobus Solfat 1e-123
1s1m_A545 Crystal Structure Of E. Coli Ctp Synthetase Length 1e-119
1vco_A550 Crystal Structure Of T.Th. Hb8 Ctp Synthetase Compl 1e-117
1vcm_A550 Crystal Structure Of T.Th. Hb8 Ctp Synthetase Lengt 1e-117
2vkt_A289 Human Ctp Synthetase 2 - Glutaminase Domain Length 2e-82
2v4u_A289 Human Ctp Synthetase 2 - Glutaminase Domain In Comp 3e-81
2vo1_A295 Crystal Structure Of The Synthetase Domain Of Human 2e-75
3ihl_A282 Human Ctps2 Crystal Structure Length = 282 1e-72
2w7t_A273 Trypanosoma Brucei Ctps - Glutaminase Domain With B 3e-49
>pdb|3NVA|A Chain A, Dimeric Form Of Ctp Synthase From Sulfolobus Solfataricus Length = 535 Back     alignment and structure 
Iteration: 1

 Score =  437 bits (1125), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/514 (43%), Positives = 327/514 (63%), Gaps = 26/514 (5%)
Query: 73  LDPYLNTDAGTMSPFEHXXXXXXXXXXXXXXXXXNYERFMDIKLTRDNNITTGKIYQSVI 132
           +DPY+N DAGTM+P+ H                 +YERFMD+ +T+ NNIT GK+Y  VI
Sbjct: 41  IDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDVNMTKYNNITAGKVYFEVI 100
Query: 133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
            KER+G YLG+TVQ++PH+TD+I+D      MI    K    ++ ++E+GGT+GDIES+P
Sbjct: 101 KKEREGKYLGQTVQIIPHVTDQIKD------MIRYASKINNAEITLVEIGGTVGDIESLP 154
Query: 193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
           F+EA+ Q     G  N   +H++LV  L+V GE KTKP QHSV+ LR  G+ P+ +  R+
Sbjct: 155 FLEAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRA 214
Query: 253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKE 312
           T+ LDD  + K++ F +V   +I++ YDV   + +P++L  QK    I   L L+   ++
Sbjct: 215 TLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQ 272
Query: 313 PLLKEWTSRAEICDGLH--EPVRIAMVGKYTGLSDAYLSILKALLHAS--VDLRKKLVID 368
             L +W S      G++  + + IA+VGKYT L D+Y+SI +A+ HAS  + +R KL+  
Sbjct: 273 VDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLI-- 330
Query: 369 WIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPY 428
           WI + DLE  T+  N        ++L   +GI+V  GFG+RG +GKI A KYAREH IP+
Sbjct: 331 WIESTDLESDTKNLN--------EILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPF 382
Query: 429 LGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSK-THMGGTMRLGSRR 487
           LGIC G Q++++EFAR VL L +ANSTE +PNTK+P +  + E    T +GGTMRLG+++
Sbjct: 383 LGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQK 442
Query: 488 TYFQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVEL 547
              + +   + +LYG +  + ERHRHRYEVNP  +  LE+AGL  +G  E    +EI+EL
Sbjct: 443 IILK-EGTIAYQLYGKKV-VYERHRHRYEVNPKYVDILEDAGLVVSGISENG-LVEIIEL 499
Query: 548 PNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAAC 581
           P++ +F+  Q HPE+KSRP  PSP++LG I A  
Sbjct: 500 PSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVA 533
>pdb|1S1M|A Chain A, Crystal Structure Of E. Coli Ctp Synthetase Length = 545 Back     alignment and structure
>pdb|1VCO|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Complex With Glutamine Length = 550 Back     alignment and structure
>pdb|1VCM|A Chain A, Crystal Structure Of T.Th. Hb8 Ctp Synthetase Length = 550 Back     alignment and structure
>pdb|2VKT|A Chain A, Human Ctp Synthetase 2 - Glutaminase Domain Length = 289 Back     alignment and structure
>pdb|2V4U|A Chain A, Human Ctp Synthetase 2 - Glutaminase Domain In Complex With 5-Oxo-L-Norleucine Length = 289 Back     alignment and structure
>pdb|2VO1|A Chain A, Crystal Structure Of The Synthetase Domain Of Human Ctp Synthetase Length = 295 Back     alignment and structure
>pdb|3IHL|A Chain A, Human Ctps2 Crystal Structure Length = 282 Back     alignment and structure
>pdb|2W7T|A Chain A, Trypanosoma Brucei Ctps - Glutaminase Domain With Bound Acivicin Length = 273 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 0.0
1vco_A550 CTP synthetase; tetramer, riken structural genomic 0.0
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 0.0
2c5m_A294 CTP synthase; cytidine 5-prime triphosphate synthe 1e-160
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 1e-141
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 1e-118
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 1e-09
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 2e-08
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 3e-05
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 2e-04
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Length = 535 Back     alignment and structure
 Score =  758 bits (1960), Expect = 0.0
 Identities = 233/511 (45%), Positives = 341/511 (66%), Gaps = 22/511 (4%)

Query: 73  LDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVI 132
           +DPY+N DAGTM+P+ HGEVFV +DG E DLDLG+YERFMD+ +T+ NNIT GK+Y  VI
Sbjct: 41  IDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGHYERFMDVNMTKYNNITAGKVYFEVI 100

Query: 133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
            KER+G YLG+TVQ++PH+TD+I+D I   +      K    ++ ++E+GGT+GDIES+P
Sbjct: 101 KKEREGKYLGQTVQIIPHVTDQIKDMIRYAS------KINNAEITLVEIGGTVGDIESLP 154

Query: 193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
           F+EA+ Q     G  N   +H++LV  L+V GE KTKP QHSV+ LR  G+ P+ +  R+
Sbjct: 155 FLEAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRA 214

Query: 253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKE 312
           T+ LDD  + K++ F +V   +I++ YDV   + +P++L  QK    I   L L+   ++
Sbjct: 215 TLPLDDETRRKIALFTNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQ 272

Query: 313 PLLKEWTSRAEICDGLH--EPVRIAMVGKYTGLSDAYLSILKALLHASVDLRKKLVIDWI 370
             L +W S      G++  + + IA+VGKYT L D+Y+SI +A+ HAS  +  +  + WI
Sbjct: 273 VDLTDWISFVNNIKGINSKKTINIALVGKYTKLKDSYISIKEAIYHASAYIGVRPKLIWI 332

Query: 371 PACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHRIPYLG 430
            + DLE  ++ +N +      ++L   +GI+V  GFG+RG +GKI A KYAREH IP+LG
Sbjct: 333 ESTDLE--SDTKNLN------EILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHNIPFLG 384

Query: 431 ICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRRTY 489
           IC G Q++++EFAR VL L +ANSTE +PNTK+P +  + E  + T +GGTMRLG+++  
Sbjct: 385 ICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKII 444

Query: 490 FQIKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPN 549
            + +   + +LYG +  + ERHRHRYEVNP  +  LE+AGL  +G  E    +EI+ELP+
Sbjct: 445 LK-EGTIAYQLYG-KKVVYERHRHRYEVNPKYVDILEDAGLVVSGISENG-LVEIIELPS 501

Query: 550 HPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 580
           + +F+  Q HPE+KSRP  PSP++LG I A 
Sbjct: 502 NKFFVATQAHPEFKSRPTNPSPIYLGFIRAV 532
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Length = 550 Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Length = 545 Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Length = 289 Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Length = 273 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254 Back     alignment and structure
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Length = 315 Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Length = 200 Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Length = 201 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 100.0
1vco_A550 CTP synthetase; tetramer, riken structural genomic 100.0
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 100.0
2c5m_A294 CTP synthase; cytidine 5-prime triphosphate synthe 100.0
2vo1_A295 CTP synthase 1; pyrimidine biosynthesis, glutamine 100.0
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 100.0
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 100.0
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 100.0
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 99.95
2a9v_A212 GMP synthase; structural genomics, joint center fo 99.92
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 99.92
4gud_A211 Imidazole glycerol phosphate synthase subunit His; 99.92
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 99.91
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 99.91
3uow_A 556 GMP synthetase; structural genomics consortium, SG 99.9
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 99.89
1i1q_B192 Anthranilate synthase component II; tryptophan bio 99.89
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 99.89
2ywj_A186 Glutamine amidotransferase subunit PDXT; uncharact 99.88
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 99.88
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 99.88
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 99.87
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 99.86
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 99.86
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 99.85
3l7n_A236 Putative uncharacterized protein; glutamine amidot 99.84
3m3p_A250 Glutamine amido transferase; structural genomics, 99.83
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 99.81
2ywd_A191 Glutamine amidotransferase subunit PDXT; pyridoxin 99.81
1q7r_A219 Predicted amidotransferase; structural genomics, Y 99.81
2nv0_A196 Glutamine amidotransferase subunit PDXT; 3-layer(A 99.81
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 99.8
2iss_D208 Glutamine amidotransferase subunit PDXT; (beta/alp 99.78
2abw_A227 PDX2 protein, glutaminase; PLP-synthase, vitamin B 99.72
1jvn_A 555 Glutamine, bifunctional histidine biosynthesis pro 99.64
2h2w_A312 Homoserine O-succinyltransferase; TM0881, (EC 2.3. 99.43
2vdj_A301 Homoserine O-succinyltransferase; methionine biosy 99.41
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 98.85
1fy2_A229 Aspartyl dipeptidase; serine protease, catalytic t 98.28
3l4e_A206 Uncharacterized peptidase LMO0363; hypothetical pr 98.26
1oi4_A193 Hypothetical protein YHBO; PFPI/THIJ family, compl 97.48
3l18_A168 Intracellular protease I; gatase1_PFPI_LIKE, hydro 97.0
2vrn_A190 Protease I, DR1199; cysteine sulfenic acid, DJ-1/T 96.1
2rk3_A197 Protein DJ-1; parkinson'S disease, THIJ, PFPI, cha 95.93
2ab0_A205 YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase 95.64
4hcj_A177 THIJ/PFPI domain protein; structural genomics, PSI 95.62
3er6_A209 Putative transcriptional regulator protein; struct 95.47
4e08_A190 DJ-1 beta; flavodoxin-like fold, stress response, 95.32
3l3b_A242 ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, 94.88
3cne_A175 Putative protease I; structural genomics, PSI-2, M 94.5
1vhq_A232 Enhancing lycopene biosynthesis protein 2; structu 94.38
3f5d_A206 Protein YDEA; unknow protein, PSI-II, nysgrc, stru 94.32
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 94.27
2fex_A188 Conserved hypothetical protein; structural genomic 94.22
3efe_A212 THIJ/PFPI family protein; structural GEN csgid, ce 94.02
1u9c_A224 APC35852; structural genomics, protein structure i 93.97
3ej6_A688 Catalase-3; heme, hydrogen iron, metal-binding, ox 93.83
3gra_A202 Transcriptional regulator, ARAC family; transcript 93.7
3fse_A365 Two-domain protein containing DJ-1/THIJ/PFPI-like 93.65
3ttv_A753 Catalase HPII; heme orientation, oxidoreductase; H 92.96
1rw7_A243 YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI supe 92.8
3en0_A291 Cyanophycinase; serine protease, beta peptide spec 92.79
3n7t_A247 Macrophage binding protein; seattle structural gen 92.61
3noq_A231 THIJ/PFPI family protein; DJ-1 superfamily, isocya 92.43
2iuf_A688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 92.42
3kkl_A244 Probable chaperone protein HSP33; peptidase, heat 92.29
4dzz_A206 Plasmid partitioning protein PARF; deviant walker 91.18
3qxc_A242 Dethiobiotin synthetase; DTBS, structural genomics 90.93
3mgk_A211 Intracellular protease/amidase related enzyme (THI 90.78
1n57_A291 Chaperone HSP31, protein YEDU; alpha-beta sandwich 90.33
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 90.06
4gdh_A194 DJ-1, uncharacterized protein C22E12.03C; unknown 89.85
3ot1_A208 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate 89.81
3ewn_A253 THIJ/PFPI family protein; monomer, PSI nysgrc, str 89.07
1sy7_A715 Catalase 1; heme oxidation, singlet oxygen, oxidor 88.43
2xxa_A433 Signal recognition particle protein; protein trans 84.26
1hyq_A263 MIND, cell division inhibitor (MIND-1); MINC, FTSZ 83.33
3of5_A228 Dethiobiotin synthetase; structural genomics, cent 83.12
1xjc_A169 MOBB protein homolog; structural genomics, midwest 82.91
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 80.59
3fgn_A251 Dethiobiotin synthetase; biotin biosynthesis, BIOD 80.52
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
Probab=100.00  E-value=1e-193  Score=1580.29  Aligned_cols=525  Identities=44%  Similarity=0.801  Sum_probs=505.2

Q ss_pred             CCCeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCc
Q 006689           34 LNLQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGN  107 (635)
Q Consensus        34 ~~~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~  107 (635)
                      |+||||||||||+||||      |||+|||+     |||+||+||||||||||||||||||||||||||||+||||||||
T Consensus         1 ~~~k~i~vtggv~s~lgkgi~~as~g~ll~~-----~g~~v~~~k~dpylnvd~gtmsp~~hgevfv~~dg~e~dldlg~   75 (535)
T 3nva_A            1 MPNKYIVVTGGVLSSVGKGTLVASIGMLLKR-----RGYNVTAVKIDPYINVDAGTMNPYMHGEVFVTEDGAETDLDLGH   75 (535)
T ss_dssp             -CCEEEEEECCCSTTTTHHHHHHHHHHHHHH-----TTCCEEEEEEECSSSSSSTTCCHHHHCCCEECTTCCEECTHHHH
T ss_pred             CCceEEEEeCccccCcchHHHHHHHHHHHHH-----CCceEEEEecCcceeecCCCCCccccceEEEecCCccccccccc
Confidence            56899999999999999      99999999     99999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccc
Q 006689          108 YERFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGD  187 (635)
Q Consensus       108 YeRfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGd  187 (635)
                      ||||||++|||+||+||||||++||+|||||||||||||||||||||||+||+++|+      ..+||||||||||||||
T Consensus        76 yerf~~~~l~~~~n~ttg~iy~~vi~ker~g~ylg~tvqviphit~eik~~i~~~~~------~~~~dv~i~eiggtvgd  149 (535)
T 3nva_A           76 YERFMDVNMTKYNNITAGKVYFEVIKKEREGKYLGQTVQIIPHVTDQIKDMIRYASK------INNAEITLVEIGGTVGD  149 (535)
T ss_dssp             HHHHHCCCCCGGGEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHH------HHTCSEEEEEECSCTTS
T ss_pred             hhhhcCCCcccccCcchhHHHHHHHHHHhcCCcCCCeeEECCCchHHHHHHHHHhhc------cCCCCEEEEEeCCccch
Confidence            999999999999999999999999999999999999999999999999999999996      46899999999999999


Q ss_pred             cCcchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhcccccc
Q 006689          188 IESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQF  267 (635)
Q Consensus       188 ies~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislf  267 (635)
                      |||+||+|||||||+++|++|+|||||||||||+++|||||||||||||+|||+|||||+|||||++++++++|+|||||
T Consensus       150 ies~pf~ea~rq~~~~~g~~n~~~ih~tlvp~~~~~ge~ktkptqhsv~~Lrs~GIqPdilvcRs~~~l~~~~r~KiaLf  229 (535)
T 3nva_A          150 IESLPFLEAVRQLKLEEGEDNVIFVHIALVEYLSVTGELKTKPLQHSVQELRRIGIQPDFIVGRATLPLDDETRRKIALF  229 (535)
T ss_dssp             GGGHHHHHHHHHHHHHHCTTTEEEEEEEECCBCTTTSSBCCHHHHHHHHHHHHHTCCCSEEEEEESSCCCHHHHHHHHHH
T ss_pred             hcccHHHHHHHHHHHHhCCCCEEEEEeeccceecCCCcccCCchHHHHHHHHhCCCCCCEEEEecCCCCCHHHHHhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCCCCCCccchHHHHHHHHHhc--CCCCccEEEEEeccCCCcc
Q 006689          268 CHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQGTTKEPLLKEWTSRAEICD--GLHEPVRIAMVGKYTGLSD  345 (635)
Q Consensus       268 c~v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~~~~~~~~l~~W~~lv~~~~--~~~~~v~IalVGkY~~l~D  345 (635)
                      |||++++||+++|+||||++|++||+||+++.++++|+|+  .+.++|++|++++++++  ++.++++||+||||+++.|
T Consensus       230 c~V~~~~VI~i~DvdtiY~vpl~L~~qGl~~~~~~~l~l~--~~~~~~~~w~~~~~~~~~~~~~~~v~IalVGKY~~l~D  307 (535)
T 3nva_A          230 TNVKVDHIVSSYDVETSYEVPIILESQKLVSKILSRLKLE--DRQVDLTDWISFVNNIKGINSKKTINIALVGKYTKLKD  307 (535)
T ss_dssp             TTCCGGGEEEEECCSCGGGHHHHHHHHTHHHHHHHHTTCC--CCCCCCHHHHHHHHHHHTTTCCCEEEEEEEESCTTSGG
T ss_pred             cCCChhceEecCCCChHHHhHHHHHHCCcHHHHHHHcCCC--CCCCCHHHHHHHHHHhhccCCCCeeEEEEEecCcCCch
Confidence            9999999999999999999999999999999999999997  46779999999999999  8888999999999999999


Q ss_pred             hHHHHHHHHHHccccceeeeEEEEecCCCCCccccCCChhhhhHHHHhccCCCEEEECCCCCCCcchhHHHHHHHHHHcC
Q 006689          346 AYLSILKALLHASVDLRKKLVIDWIPACDLEDATEKENPDAYKAAWKLLKGADGILVPGGFGNRGVQGKILAAKYAREHR  425 (635)
Q Consensus       346 aY~SI~~AL~~ag~~~~vkl~i~wi~s~~le~~~~~~~p~~y~~a~~~L~~~DGIllPGGfG~rg~eg~i~air~are~~  425 (635)
                      +|.|+.+||+|+|+++.+++++.|++++++++.+.        +||+.|.++|||++|||||+++.++++.++++|++++
T Consensus       308 aY~Sv~eAL~hag~~~~~~V~I~wIds~~l~~~~~--------~~~~~L~~~DgIIlpGG~G~~~~~g~i~~ir~a~~~~  379 (535)
T 3nva_A          308 SYISIKEAIYHASAYIGVRPKLIWIESTDLESDTK--------NLNEILGNVNGIIVLPGFGSRGAEGKIKAIKYAREHN  379 (535)
T ss_dssp             GGHHHHHHHHHHHHHTTCEEEEEEEEGGGGCCSSS--------CCTTTTTSCSEEEECCCCSSTTHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHcCCCeEEEEecchhcccccc--------chhhhccCCCEEEECCCCCCccHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999998875432        1467899999999999999999999999999999999


Q ss_pred             CCEEEEehhHHHHHHHHhcccccccCCCCCccCCCCCCCeeeeCCCCC-cCcCCCccccCceeEEEecCCchhhhccCCc
Q 006689          426 IPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQIKDCKSAKLYGNR  504 (635)
Q Consensus       426 iP~LGICLGmQllaie~GrnV~glkda~S~Ef~~~~~~pvi~~mpe~~-~~h~GgtmrLG~~~v~l~~~~sll~~iyg~~  504 (635)
                      +|+||||+|||+|+++|||+|+|++||+|+||++++++|++.+|+++. ..++|||||+|.|+|.+.++ |+++++|| +
T Consensus       380 ~PiLGIClG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG-~  457 (535)
T 3nva_A          380 IPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYG-K  457 (535)
T ss_dssp             CCEEEETHHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHT-S
T ss_pred             CcEEEECcchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhcccccccCCccccCceEEEEcCC-CcHHHHhC-C
Confidence            999999999999999999999999999999999999999999999864 47899999999999999998 99999997 6


Q ss_pred             eeEEEEeeeeeeeChhhhhhhcCCCeEEEEEeCCCCeEEEEEeCCCCcEEEEcccCCCcCCCCCchHHHHHHHHHHhc
Q 006689          505 TFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG  582 (635)
Q Consensus       505 ~~I~erHrHrYeVnp~~v~~Le~~Gl~~sa~s~dg~~vE~iE~~~~p~fvGVQFHPE~ss~p~~p~pLF~~Fv~aa~~  582 (635)
                      ..|.+||||||+||+.+.+.+++.|++++|+++||. +|++|+++||||+|||||||+.++|.+++|||.+|++||.+
T Consensus       458 ~~I~erHrHryeVNs~h~q~l~~~GL~vsA~s~DG~-IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~~  534 (535)
T 3nva_A          458 KVVYERHRHRYEVNPKYVDILEDAGLVVSGISENGL-VEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVAS  534 (535)
T ss_dssp             SEEEEEEEECCEECHHHHHHHHHTTCEEEEECTTCC-EEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHTC
T ss_pred             CeeeecccccceechHHHhhcccCCeEEEEEeCCCC-EEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHHh
Confidence            678999999999999999999889999999999995 99999999999999999999999999999999999999864
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A* Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 Back     alignment and structure
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Back     alignment and structure
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} Back     alignment and structure
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} Back     alignment and structure
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A Back     alignment and structure
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A Back     alignment and structure
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans} Back     alignment and structure
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ... Back     alignment and structure
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii} Back     alignment and structure
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster} Back     alignment and structure
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis} Back     alignment and structure
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A Back     alignment and structure
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis} Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2 Back     alignment and structure
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis} Back     alignment and structure
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2 Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Back     alignment and structure
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida} Back     alignment and structure
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Back     alignment and structure
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A Back     alignment and structure
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP} Back     alignment and structure
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 Back     alignment and structure
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Back     alignment and structure
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A* Back     alignment and structure
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* Back     alignment and structure
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A Back     alignment and structure
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A Back     alignment and structure
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0 Back     alignment and structure
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV} Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Back     alignment and structure
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9 Back     alignment and structure
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10 Back     alignment and structure
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp} Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 635
d2vo1a1273 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal 1e-111
d1s1ma2266 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal 1e-103
d1vcoa2272 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal 1e-102
d1s1ma1258 c.23.16.1 (A:287-544) CTP synthase PyrG, C-termina 6e-89
d1vcoa1250 c.23.16.1 (A:298-547) CTP synthase PyrG, C-termina 2e-88
d1l9xa_288 c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Ho 1e-15
d2abwa1218 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protei 3e-12
d1a9xb2228 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthe 7e-04
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: CTP synthase PyrG, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  332 bits (854), Expect = e-111
 Identities = 153/234 (65%), Positives = 187/234 (79%)

Query: 73  LDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFMDIKLTRDNNITTGKIYQSVI 132
           +DPY+N DAGT SP+EHGEVFVLDDGGEVDLDLGNYERF+DI+LT+DNN+TTGKIYQ VI
Sbjct: 39  IDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVI 98

Query: 133 DKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIESMP 192
           +KERKGDYLGKTVQVVPHITD IQ+W+ R A+IPVD       VCVIELGGT+GDIESMP
Sbjct: 99  NKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIESMP 158

Query: 193 FIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRS 252
           FIEA  QF ++V   NFC IHVSLVP  +  GEQKTKPTQ+SVR LRG GL+P+++ CR 
Sbjct: 159 FIEAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRC 218

Query: 253 TVALDDNVKGKLSQFCHVPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNL 306
           +  LD +VK K+S FCHV  + +I ++DV +I+ +PLLL +Q   +   + L+L
Sbjct: 219 SNPLDTSVKEKISMFCHVEPEQVICVHDVSSIYRVPLLLEEQGVVDYFLRRLDL 272
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 266 Back     information, alignment and structure
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 272 Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 258 Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 250 Back     information, alignment and structure
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 218 Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Length = 228 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
d2vo1a1273 CTP synthase PyrG, N-terminal domain {Human (Homo 100.0
d1s1ma2266 CTP synthase PyrG, N-terminal domain {Escherichia 100.0
d1vcoa2272 CTP synthase PyrG, N-terminal domain {Thermus ther 100.0
d1vcoa1250 CTP synthase PyrG, C-terminal domain {Thermus ther 100.0
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 100.0
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 99.96
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 99.94
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 99.94
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 99.91
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 99.9
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 99.9
d1k9vf_200 GAT subunit, HisH, (or domain) of imidazoleglycero 99.87
d1jvna2232 GAT subunit, HisH, (or domain) of imidazoleglycero 99.84
d1l9xa_288 gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta 99.84
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 99.84
d1q7ra_202 Hypothetical protein YaaE {Bacillus stearothermoph 99.83
d2abwa1218 Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p 99.83
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 99.8
d1ka9h_195 GAT subunit, HisH, (or domain) of imidazoleglycero 99.77
d2ghra1281 Homoserine O-succinyltransferase HTS (MetA) {Bacil 99.33
d1t3ta2262 FGAM synthase PurL, amidotransferase domain {Salmo 98.9
d1a9xb1151 Carbamoyl phosphate synthetase, small subunit N-te 98.76
d1g2ia_166 Intracellular protease {Archaeon Pyrococcus horiko 96.41
d1p80a1156 Catalase, C-terminal domain {Escherichia coli, HPI 96.37
d1oi4a1170 Hypothetical protein YhbO {Escherichia coli [TaxId 96.07
d1p5fa_186 DJ-1 {Human (Homo sapiens) [TaxId: 9606]} 95.77
d1sy7a1184 Catalase, C-terminal domain {Neurospora crassa [Ta 95.4
d1vhqa_217 Putative sigma cross-reacting protein 27A (SCRP-27 95.06
d1u9ca_221 GK2698 ortholog {Bacillus stearothermophilus [TaxI 93.93
d2fexa1188 Hypothetical protein Atu0886 {Agrobacterium tumefa 91.63
d2ab0a1195 Protein ThiJ (YajL) {Escherichia coli [TaxId: 562] 91.47
d1qvwa_236 Hypothetical protein Ydr533Cp {Baker's yeast (Sacc 91.09
d1byia_224 Dethiobiotin synthetase {Escherichia coli [TaxId: 91.08
d1n57a_279 HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} 89.46
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 88.98
d1fjha_257 3-alpha-hydroxysteroid dehydrogenase {Comamonas te 83.2
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: CTP synthase PyrG, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-135  Score=1020.95  Aligned_cols=267  Identities=59%  Similarity=0.979  Sum_probs=225.4

Q ss_pred             CeEEEEccccccchh------hHHHHHHhcCcCCCCceeEEeccCCccccCCCCCCccCcceEEEccCCccccCCCCccc
Q 006689           36 LQYMFLCLNECACIN------FFSLFLVQNCQYHPNTHFNLFGLDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYE  109 (635)
Q Consensus        36 ~k~i~vtggv~s~lg------s~g~ll~~~~~~~~g~~v~~~K~DpYlN~d~gtmsp~eHGEvfV~~DG~E~DlDlG~Ye  109 (635)
                      ||||||||||+||||      |||+|||+     |||+|+++|+|||||+|||||||||||||||||||+||||||||||
T Consensus         1 mKyifVtGGV~S~lGKGi~~aSig~ll~~-----~g~~V~~~K~DPYlNvD~GtmsP~eHGEvfVt~DG~EtDlDlG~YE   75 (273)
T d2vo1a1           1 MKYILVTGGVISGIGKGIIASSVGTILKS-----CGLHVTSIKIDPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYE   75 (273)
T ss_dssp             CEEEEEEECSSSSSSHHHHHHHHHHHHHH-----TTCCEEEEEEECSSCCC-----------------------------
T ss_pred             CeEEEEeCCcccccchHHHHHHHHHHHHh-----CCceeEEEecccceecCCCCCCHHHHhhhheecccccccccCcchH
Confidence            799999999999999      99999999     9999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccchHhHHHHHhhhhcCCCCCCeeEEcccchHHHHHHHHHHhcccCCCCCCCCcEEEEeeCCcccccC
Q 006689          110 RFMDIKLTRDNNITTGKIYQSVIDKERKGDYLGKTVQVVPHITDEIQDWIERVAMIPVDGKEGPVDVCVIELGGTIGDIE  189 (635)
Q Consensus       110 Rfl~~~l~~~~nittGkiy~~vi~kEr~g~ylG~tvQviPHit~~i~~~i~~~~~~pvd~~~~~~dv~i~EiGGTvGdie  189 (635)
                      ||||++|||+||+||||||++||+|||+|+|||||||||||||||||+||+++|.+|+|+++.+||||||||||||||||
T Consensus        76 RFl~~~l~~~~n~TtG~iy~~Vi~kER~G~yLGkTVQvIPHiTdeIk~~I~~~a~~~~~~~~~~~Di~IvEIGGTVGDIE  155 (273)
T d2vo1a1          76 RFLDIRLTKDNNLTTGKIYQYVINKERKGDYLGKTVQVVPHITDAIQEWVMRQALIPVDEDGLEPQVCVIELGGTVGDIE  155 (273)
T ss_dssp             ----------CEEEHHHHHHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHSCCSSSCCCCSEEEEEECSCTTCGG
T ss_pred             HHhcCCccccccccHHHHHHHHHHHHhccccccccCCcCCCHhHHHHHHHHHhhcccccccCCCCcEEEEEcCcccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHhhhhcCCCCEEEEeeeeeeeecCCCccccCCccchhhhhhcCCCcccEEEEeeCCCCChhhhccccccCC
Q 006689          190 SMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPNILACRSTVALDDNVKGKLSQFCH  269 (635)
Q Consensus       190 s~pf~ea~rq~~~~~g~~n~~~ihv~~vp~~~~~~e~KtKptQ~svk~Lrs~Gi~pd~iv~R~~~~l~~~~r~Kislfc~  269 (635)
                      |+||+||+||||+++|++|+||||||||||++++||+||||||||||+|||+|||||+|+|||+.+++++.|+||||||+
T Consensus       156 s~pFlEAiRQl~~e~g~~n~~~iHvtlvP~~~~~gE~KTKPTQhSVkeLrs~GIqPDilvcRse~~l~~~~k~KIslFcn  235 (273)
T d2vo1a1         156 SMPFIEAFRQFQFKVKRENFCNIHVSLVPQPSSTGEQKTKPTQNSVRELRGLGLSPDLVVCRCSNPLDTSVKEKISMFCH  235 (273)
T ss_dssp             GHHHHHHHHHHHHHSCGGGEEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHTCCCSEEEEECSSCCCHHHHHHHHHHTT
T ss_pred             hcHHHHHHHHHHHHhCCcceEEEeeccccccccchhhcccchhHHHHHHHHcCCCCCeeeeccCCCCCHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeeeeCCCCCcchhhHHHHHhhhHHHHHHhcCCC
Q 006689          270 VPEQNIITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLQ  307 (635)
Q Consensus       270 v~~~~Vi~i~dvdt~y~vpl~LreqG~~~~i~~~l~l~  307 (635)
                      |++++||+++|++|+|+||++|++||+++.|+++|+|+
T Consensus       236 V~~~~VI~~~Dv~sIYeVPl~l~~qgl~~~i~~~L~LP  273 (273)
T d2vo1a1         236 VEPEQVICVHDVSSIYRVPLLLEEQGVVDYFLRRLDLP  273 (273)
T ss_dssp             SCGGGEEEECCCSSGGGHHHHHHHTTHHHHHHHHHTCC
T ss_pred             CChhhEEEcCCcccHHHHHHHHHHCCcHHHHHHHcCCC
Confidence            99999999999999999999999999999999999985
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1a9xb1 c.8.3.1 (B:1502-1652) Carbamoyl phosphate synthetase, small subunit N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} Back     information, alignment and structure
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Back     information, alignment and structure