Citrus Sinensis ID: 006691
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 635 | 2.2.26 [Sep-21-2011] | |||||||
| Q5ZLW3 | 669 | Dymeclin OS=Gallus gallus | yes | no | 0.856 | 0.813 | 0.306 | 1e-67 | |
| B4F766 | 674 | Dymeclin OS=Rattus norveg | yes | no | 0.910 | 0.857 | 0.299 | 8e-65 | |
| Q8CHY3 | 669 | Dymeclin OS=Mus musculus | yes | no | 0.913 | 0.866 | 0.295 | 5e-64 | |
| Q6DCP6 | 669 | Dymeclin OS=Xenopus laevi | N/A | no | 0.883 | 0.838 | 0.300 | 8e-64 | |
| Q28BM0 | 669 | Dymeclin OS=Xenopus tropi | yes | no | 0.866 | 0.822 | 0.300 | 2e-63 | |
| Q7RTS9 | 669 | Dymeclin OS=Homo sapiens | yes | no | 0.908 | 0.862 | 0.307 | 3e-63 | |
| Q5RAW5 | 669 | Dymeclin OS=Pongo abelii | yes | no | 0.881 | 0.837 | 0.302 | 9e-63 | |
| Q293C2 | 700 | Dymeclin OS=Drosophila ps | yes | no | 0.831 | 0.754 | 0.286 | 3e-57 | |
| Q7KNA0 | 699 | Dymeclin OS=Drosophila me | yes | no | 0.842 | 0.765 | 0.283 | 5e-57 | |
| B0G194 | 931 | Dymeclin OS=Dictyostelium | yes | no | 0.672 | 0.458 | 0.300 | 1e-44 |
| >sp|Q5ZLW3|DYM_CHICK Dymeclin OS=Gallus gallus GN=DYM PE=2 SV=1 | Back alignment and function desciption |
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Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 309/588 (52%), Gaps = 44/588 (7%)
Query: 38 FWQKLLELPLS-------LHWPSHRVHQACEAFAQNNCYTRHLAKIL-IHLTWCLQECIS 89
FW +LL + L C++ + N T +L ++ + L+ + IS
Sbjct: 32 FWNQLLSFSFTTPTNSADLKLLEEATVSVCKSLVEKNPRTGNLGSLIKVFLSRTKELKIS 91
Query: 90 SSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEPLPKEFVLDQNIEN 149
+ + I +A NA++I LK I E + LH + ++ P + IE
Sbjct: 92 AECQNHLFIWQAHNALFIICCLLKVFISRMSEEELQ-LHFTYEDKTPGSYGTECEDLIEE 150
Query: 150 LV--MHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMT 207
L+ + ++ I L+D+ TY++ E + ++V +S QL L +H ++
Sbjct: 151 LLCCLIQLIVEIPLLDI---TYSISLEAVTTLIVFLSCQLFHKEILRESLIHKYLMRGRC 207
Query: 208 EESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSAAATIVLLPFNYL 267
+V+ LL N+I + R S S+ + + G+L + S AT + F
Sbjct: 208 --LPYTSRLVKTLLYNFIRQER-SPPPGSHVFQQQTDGGGLLYGIASGVATGLWTVFT-- 262
Query: 268 VSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNP 327
+ G ++ L CS L ++S+ + +D+ T NP
Sbjct: 263 LGGVGSKATPQLDQCSPLA-------------NQSLLLLLVLANLTDAPD------TPNP 303
Query: 328 YCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASLFDTLGMYLADETAVLLLYSLVQGN 386
Y A+ + ++ + D + S P V ++ F SL+ L + A LLLY L+ N
Sbjct: 304 YRQAIMSFKNTQ----DSSAFSSSHPHVFQINFNSLYTALCEQQKSDQATLLLYMLLHQN 359
Query: 387 SGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMIL 446
YVL RTD++ L++PILE LY+ ++ + +YM LIILLIL++D FN SIH++IL
Sbjct: 360 GNVRTYVLARTDIENLVLPILEILYHVEERNSHHVYMALIILLILTEDDGFNRSIHEVIL 419
Query: 447 PSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSA 506
++ WY E +L + SLGSLL++++IRT++YN+++ RD YLHT CLA LANM+ L
Sbjct: 420 KNITWYAERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLAALANMSAQFRSLHQ 479
Query: 507 YASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMSAELHIYTDFLRIVLEIL 565
YA+QR++SLF +LS+K+NK+ ++ +G+L DS D + +L++ + +R++LEI+
Sbjct: 480 YAAQRIISLFSLLSKKHNKVLEQATQSLRGSLDSNDSPLPDYAQDLNVIEEVIRMMLEII 539
Query: 566 NAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVSRWF 613
N+ LT +L NP +VYA+L++ ++F+ F++HP F ++++NI V +F
Sbjct: 540 NSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQDIMQNIDLVISFF 587
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Gallus gallus (taxid: 9031) |
| >sp|B4F766|DYM_RAT Dymeclin OS=Rattus norvegicus GN=Dym PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8CHY3|DYM_MOUSE Dymeclin OS=Mus musculus GN=Dym PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6DCP6|DYM_XENLA Dymeclin OS=Xenopus laevis GN=dym PE=2 SV=1 | Back alignment and function description |
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| >sp|Q28BM0|DYM_XENTR Dymeclin OS=Xenopus tropicalis GN=dym PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7RTS9|DYM_HUMAN Dymeclin OS=Homo sapiens GN=DYM PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5RAW5|DYM_PONAB Dymeclin OS=Pongo abelii GN=DYM PE=2 SV=1 | Back alignment and function description |
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| >sp|Q293C2|DYM_DROPS Dymeclin OS=Drosophila pseudoobscura pseudoobscura GN=GA20914 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7KNA0|DYM_DROME Dymeclin OS=Drosophila melanogaster GN=CG8230 PE=1 SV=1 | Back alignment and function description |
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| >sp|B0G194|DYM_DICDI Dymeclin OS=Dictyostelium discoideum GN=dym PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 635 | ||||||
| 359477563 | 726 | PREDICTED: dymeclin-like [Vitis vinifera | 0.965 | 0.844 | 0.800 | 0.0 | |
| 224111108 | 722 | predicted protein [Populus trichocarpa] | 0.959 | 0.843 | 0.777 | 0.0 | |
| 22329321 | 732 | uncharacterized protein [Arabidopsis tha | 0.962 | 0.834 | 0.725 | 0.0 | |
| 297843230 | 732 | hypothetical protein ARALYDRAFT_470396 [ | 0.962 | 0.834 | 0.712 | 0.0 | |
| 449432656 | 726 | PREDICTED: dymeclin-like [Cucumis sativu | 0.960 | 0.840 | 0.714 | 0.0 | |
| 3142290 | 814 | Contains similarity to gb|Z69902 from C. | 0.955 | 0.745 | 0.651 | 0.0 | |
| 356535952 | 722 | PREDICTED: dymeclin-like isoform 1 [Glyc | 0.957 | 0.842 | 0.687 | 0.0 | |
| 356575887 | 723 | PREDICTED: dymeclin-like [Glycine max] | 0.959 | 0.842 | 0.687 | 0.0 | |
| 356535954 | 702 | PREDICTED: dymeclin-like isoform 2 [Glyc | 0.957 | 0.866 | 0.684 | 0.0 | |
| 356537124 | 710 | PREDICTED: dymeclin-like [Glycine max] | 0.951 | 0.850 | 0.680 | 0.0 |
| >gi|359477563|ref|XP_002283373.2| PREDICTED: dymeclin-like [Vitis vinifera] gi|297737110|emb|CBI26311.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/617 (80%), Positives = 533/617 (86%), Gaps = 4/617 (0%)
Query: 1 MGGVPSTPRFADSRPQDTAEYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVHQAC 60
MG VPSTPR++ +RP DTAEYLI TFVGEKSFPL SDFWQKLLELPLSL WPSHRV QAC
Sbjct: 1 MGTVPSTPRWSSARPVDTAEYLIGTFVGEKSFPLTSDFWQKLLELPLSLQWPSHRVRQAC 60
Query: 61 EAFAQNNCYTRHLAKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAE 120
E FAQNN YTRHLAKILIHL CLQECIS+SG S KA+NAVYISSVFLKYLIENA+
Sbjct: 61 ELFAQNNYYTRHLAKILIHLGQCLQECISTSGVPSTVYTKAVNAVYISSVFLKYLIENAK 120
Query: 121 SENFEELHLSLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFML 180
SEN EELHLSLDESE + F DQNIEN VMH VLSFI +DV+P T+ LH ELLNFML
Sbjct: 121 SENIEELHLSLDESEVIQNNFPADQNIENFVMHGVLSFIGTLDVNPETHLLHHELLNFML 180
Query: 181 VAMSTQLLSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIF 240
+ MSTQLLS PS GPKDV+PFIDAAM +ESSLV VVRRLL+NYI RPRI +N SYSIF
Sbjct: 181 IVMSTQLLSGPSPGPKDVNPFIDAAMAQESSLVGLVVRRLLINYINRPRIPLNDVSYSIF 240
Query: 241 SEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVEND 300
SE +QPGVLQRVGSAAA VLLPFNYLVSS GEG +PL D SL VLL+LIHY KC+ D
Sbjct: 241 SEGSQPGVLQRVGSAAANFVLLPFNYLVSSGGEGPRSPLADSSLQVLLILIHYRKCILVD 300
Query: 301 ESITDRSDDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFA 360
ESI DR ATSDSL+K +T+F+ NPYC ALENARDIEF +D+EGNAHSGP+VRLPFA
Sbjct: 301 ESIADRKSGGATSDSLSKENTYFSENPYCKALENARDIEFDRVDIEGNAHSGPLVRLPFA 360
Query: 361 SLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQ 420
SLFDTLGM+LADETA+LLLYSLV GNS FLEYVLVRTDLDTLLMPILETLYNAS++T NQ
Sbjct: 361 SLFDTLGMFLADETAILLLYSLVHGNSDFLEYVLVRTDLDTLLMPILETLYNASRRTSNQ 420
Query: 421 IYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSK 480
IYMLLIILLILSQDSSFNASIHK+ILPSVPWYKE LLHQTSLGSL+VIILIRTVKYNLSK
Sbjct: 421 IYMLLIILLILSQDSSFNASIHKLILPSVPWYKERLLHQTSLGSLMVIILIRTVKYNLSK 480
Query: 481 LRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK----KGN 536
LRDVYLHT CLATLANMAPH HRLSAYASQRLVSLF MLSRKYNK+A+ DDK K N
Sbjct: 481 LRDVYLHTNCLATLANMAPHAHRLSAYASQRLVSLFDMLSRKYNKLAELMDDKMHIDKAN 540
Query: 537 LTEQDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSH 596
E DS AED+S ELHIYTDFLRIVLEILNAILTYALPRNPEVVYAI+HR+EVFQPFK+H
Sbjct: 541 SPEGDSIAEDVSTELHIYTDFLRIVLEILNAILTYALPRNPEVVYAIMHRQEVFQPFKNH 600
Query: 597 PRFNELLENIYTVSRWF 613
PRFNELLENIYTV +F
Sbjct: 601 PRFNELLENIYTVLDFF 617
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111108|ref|XP_002315750.1| predicted protein [Populus trichocarpa] gi|222864790|gb|EEF01921.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|22329321|ref|NP_171916.2| uncharacterized protein [Arabidopsis thaliana] gi|20268678|gb|AAM14043.1| unknown protein [Arabidopsis thaliana] gi|21689843|gb|AAM67565.1| unknown protein [Arabidopsis thaliana] gi|332189548|gb|AEE27669.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297843230|ref|XP_002889496.1| hypothetical protein ARALYDRAFT_470396 [Arabidopsis lyrata subsp. lyrata] gi|297335338|gb|EFH65755.1| hypothetical protein ARALYDRAFT_470396 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|449432656|ref|XP_004134115.1| PREDICTED: dymeclin-like [Cucumis sativus] gi|449504142|ref|XP_004162264.1| PREDICTED: dymeclin-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|3142290|gb|AAC16741.1| Contains similarity to gb|Z69902 from C. elegans [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356535952|ref|XP_003536505.1| PREDICTED: dymeclin-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356575887|ref|XP_003556068.1| PREDICTED: dymeclin-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356535954|ref|XP_003536506.1| PREDICTED: dymeclin-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356537124|ref|XP_003537080.1| PREDICTED: dymeclin-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 635 | ||||||
| TAIR|locus:2020230 | 732 | AT1G04200 "AT1G04200" [Arabido | 0.962 | 0.834 | 0.667 | 2.4e-211 | |
| UNIPROTKB|E1BY18 | 626 | DYM "Dymeclin" [Gallus gallus | 0.450 | 0.456 | 0.390 | 5.4e-65 | |
| UNIPROTKB|Q5ZLW3 | 669 | DYM "Dymeclin" [Gallus gallus | 0.450 | 0.427 | 0.386 | 6.8e-65 | |
| UNIPROTKB|Q7RTS9 | 669 | DYM "Dymeclin" [Homo sapiens ( | 0.448 | 0.426 | 0.373 | 1.1e-64 | |
| RGD|1309111 | 674 | Dym "dymeclin" [Rattus norvegi | 0.447 | 0.421 | 0.379 | 1.4e-64 | |
| MGI|MGI:1918480 | 669 | Dym "dymeclin" [Mus musculus ( | 0.448 | 0.426 | 0.377 | 2.9e-64 | |
| UNIPROTKB|E1BE17 | 669 | DYM "Uncharacterized protein" | 0.448 | 0.426 | 0.373 | 2.9e-64 | |
| UNIPROTKB|Q5RAW5 | 669 | DYM "Dymeclin" [Pongo abelii ( | 0.406 | 0.385 | 0.397 | 4.8e-64 | |
| UNIPROTKB|Q293C2 | 700 | GA20914 "Dymeclin" [Drosophila | 0.450 | 0.408 | 0.393 | 6.9e-63 | |
| FB|FBgn0027607 | 699 | CG8230 [Drosophila melanogaste | 0.450 | 0.409 | 0.382 | 6.1e-62 |
| TAIR|locus:2020230 AT1G04200 "AT1G04200" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2043 (724.2 bits), Expect = 2.4e-211, P = 2.4e-211
Identities = 414/620 (66%), Positives = 476/620 (76%)
Query: 1 MGGVPSTPRFADSRPQDTAEYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVHQAC 60
MGGVPSTPR AEYLIATFVGEKSFPLASDFW KLLELPLS WPS RV QAC
Sbjct: 1 MGGVPSTPRKTGGDDVSVAEYLIATFVGEKSFPLASDFWNKLLELPLSSRWPSDRVQQAC 60
Query: 61 EAFAQNNCYTRHLAKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAE 120
E FAQ+N YTRHLAK+LIHL+WCLQE + +S S KA+NA YISSVFLKYLIEN +
Sbjct: 61 ELFAQSNGYTRHLAKLLIHLSWCLQELLQASDDQSSLYKKAVNATYISSVFLKYLIENGK 120
Query: 121 SENFEELHLSLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFML 180
S++ +ELHLSLDESEP+P FV+DQ+I+N VMHSVLSFI +VSP++Y LHQELLNFML
Sbjct: 121 SDSLQELHLSLDESEPVPHGFVMDQDIQNFVMHSVLSFIGSNEVSPNSYVLHQELLNFML 180
Query: 181 VAMSTQLLSVPSLGPKDVHPFIDAAMTEEXXXXXXXXXXXXXNYITRPRIXXXXXXXXXX 240
V MSTQLLS PS GP D +PFIDAAMT+E NYI+R R
Sbjct: 181 VTMSTQLLSGPSHGPTDANPFIDAAMTQEKSLVSLVVRRLLLNYISRHRTPPNAKSYMYS 240
Query: 241 XEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSXXXXXXXIHYHKCVEND 300
++Q G+L+RVGSAAA++VLLP NYLVS++G GS NPL +CS I+YHK + +D
Sbjct: 241 DGDSQ-GILERVGSAAASLVLLPLNYLVSNSG-GSKNPLAECSLHVLLILINYHKSIMSD 298
Query: 301 EXXXXXXXXXXXXXXXXXXXXHFTVNPYCNALENARDIEFGHMDLEGNAH-SGPVVRLPF 359
E + N + AL NARD+EF D+EGNAH +GP VR+PF
Sbjct: 299 ESMTDKSDDSATSESVSKVHVFSSDNTFSKALANARDVEFDRSDVEGNAHPAGPHVRIPF 358
Query: 360 ASLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTP- 418
ASLFDTLGM+LADE AVLLLYSL+QGNS F EYVLVRTDLDTLLMPILETLYNASK+T
Sbjct: 359 ASLFDTLGMFLADEGAVLLLYSLLQGNSDFKEYVLVRTDLDTLLMPILETLYNASKRTSS 418
Query: 419 NQIYMXXXXXXXXSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNL 478
NQIYM SQDSSFN+SIHKMILPSVPWYKEHLLHQTSLGSL+VIILIRTV++NL
Sbjct: 419 NQIYMMLIVLLILSQDSSFNSSIHKMILPSVPWYKEHLLHQTSLGSLMVIILIRTVQHNL 478
Query: 479 SKLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK----K 534
SKLRDVYL TTCLATLANMAPH H LSAYASQRLVSLFYMLSRKYNK++D DK K
Sbjct: 479 SKLRDVYLQTTCLATLANMAPHAHHLSAYASQRLVSLFYMLSRKYNKLSDLTGDKLQSIK 538
Query: 535 GNLTEQD-SFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPF 593
NL+ +D +ED++AEL I+TDFLR+VL+ILNAILTYALPRNPE+VYAI+HR+EVFQPF
Sbjct: 539 INLSGEDVGVSEDLAAELQIFTDFLRLVLDILNAILTYALPRNPEIVYAIMHRQEVFQPF 598
Query: 594 KSHPRFNELLENIYTVSRWF 613
K+HPRF+EL+ENIYTV +F
Sbjct: 599 KNHPRFHELVENIYTVLDFF 618
|
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| UNIPROTKB|E1BY18 DYM "Dymeclin" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZLW3 DYM "Dymeclin" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q7RTS9 DYM "Dymeclin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|1309111 Dym "dymeclin" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1918480 Dym "dymeclin" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BE17 DYM "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5RAW5 DYM "Dymeclin" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q293C2 GA20914 "Dymeclin" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0027607 CG8230 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q28BM0 | DYM_XENTR | No assigned EC number | 0.3006 | 0.8661 | 0.8221 | yes | no |
| Q5RAW5 | DYM_PONAB | No assigned EC number | 0.3023 | 0.8818 | 0.8370 | yes | no |
| Q5ZLW3 | DYM_CHICK | No assigned EC number | 0.3061 | 0.8566 | 0.8131 | yes | no |
| Q7RTS9 | DYM_HUMAN | No assigned EC number | 0.3079 | 0.9086 | 0.8624 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 635 | |||
| pfam09742 | 659 | pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndr | 1e-169 | |
| pfam12722 | 813 | pfam12722, Hid1, High-temperature-induced dauer-fo | 4e-08 |
| >gnl|CDD|220375 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndrome protein | Back alignment and domain information |
|---|
Score = 498 bits (1284), Expect = e-169
Identities = 223/641 (34%), Positives = 322/641 (50%), Gaps = 79/641 (12%)
Query: 1 MGGVPSTPRFADSRPQDTAEYLIATFVGEKSFPLASD-FWQKLLELPLSLHWPS------ 53
MG ST R E LI VG P D FW +LL + + S
Sbjct: 1 MGASISTESKLSFR-----EALIR-LVGTDPVPPDDDPFWDELLSFSILIPTSSSDIFTL 54
Query: 54 --HRVHQACEAFAQNNCYTRHLAKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVF 111
+ + + NN T +LA ++ L E S +AINA+ I
Sbjct: 55 LDAALERILRSLFPNNLATGNLAALVRVFLRQLSELKISEDKQDS---QAINALRILRRI 111
Query: 112 LKYLIENAESENFEELHLSLDESEPLPK-------------------EFVLDQNIENLVM 152
+KYLIE+ S D + + + + E+ +
Sbjct: 112 IKYLIESGSESELLGFFWSTDPAGGVRPLATTLFEALTDLLFPAKGADLSTLSSFEDFLE 171
Query: 153 HSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMTEESSL 212
V + V+ TY +H E+L +LV +S+QL PS PF + + E+S
Sbjct: 172 ALV-GILVSPPVNDATYLIHLEILRLLLVLLSSQLYIDPSDESG--SPFYRSITSAENSH 228
Query: 213 VCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSNG 272
+ LL N++ R + S+ +FS+ +QPGVL + S++++ ++ F SN
Sbjct: 229 AGPLFTSLLNNFLARDPVP-YPYSHLLFSDGSQPGVLFGIASSSSSSLVFTFGGGKVSNS 287
Query: 273 EGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNPYCNAL 332
E S +PL + SL +LLVL+ + + NP+ AL
Sbjct: 288 ESSRSPLANVSLQLLLVLLDHCPPESPKD------------------------NPFRLAL 323
Query: 333 ENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLADETAVLLLYSLVQGNSGFLEY 392
DIE ++ SG + F++L+D+L L + +LLLY L+ NS FL Y
Sbjct: 324 FYLSDIER---SSSVSSLSGSENLIDFSALYDSLCKLLFHDELLLLLYKLLHRNSRFLSY 380
Query: 393 VLVRTDLDTLLMPILETLYNASKKT--PNQIYMLLIILLILSQDSSFNASIHKMILPSVP 450
VL R+DLD L++PILE LY+A + IYM LIILLILSQD +FN S+HK + SVP
Sbjct: 381 VLSRSDLDNLIVPILELLYDAESDQSNSHHIYMALIILLILSQDRNFNRSLHKTYIKSVP 440
Query: 451 WYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAYASQ 510
WY E L + SLGSLLV++LIRT++YN+ KLRD YLHT CLA LANM+P+ LS YA+Q
Sbjct: 441 WYTERSLFEISLGSLLVLVLIRTIQYNMKKLRDKYLHTNCLAILANMSPYFKNLSPYAAQ 500
Query: 511 RLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAELHIYTDFLRIVLEILNAILT 570
RLVSL +LSRK+ K++ +D+ +E +L + + LR++LEILN+ILT
Sbjct: 501 RLVSLLELLSRKHFKLSSLINDRLSESSEFSD-------DLAVLEEVLRLLLEILNSILT 553
Query: 571 YALPRNPEVVYAILHREEVFQPFKS-HPRFNEL-LENIYTV 609
Y L NPE+VYA+L + E+F+ F++ HP F EL L+NI V
Sbjct: 554 YQLDSNPELVYALLRKRELFEQFRNDHPAFQELPLQNIDRV 594
|
Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs. It is characteristically about 700 residues long and present in plants and animals. Mutations in the gene coding for this protein in humans give rise to the disorder Dyggve-Melchior-Clausen syndrome (DMC, MIM 223800) which is an autosomal-recessive disorder characterized by the association of a spondylo-epi-metaphyseal dysplasia and mental retardation. DYM transcripts are widely expressed throughout human development and Dymeclin is not an integral membrane protein of the ER, but rather a peripheral membrane protein dynamically associated with the Golgi apparatus. Length = 659 |
| >gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 635 | |||
| KOG2225 | 695 | consensus Proteins containing regions of low-compl | 100.0 | |
| PF09742 | 678 | Dymeclin: Dyggve-Melchior-Clausen syndrome protein | 100.0 | |
| PF12722 | 895 | Hid1: High-temperature-induced dauer-formation pro | 100.0 | |
| KOG2226 | 786 | consensus Proteins containing regions of low-compl | 100.0 | |
| PF08427 | 237 | DUF1741: Domain of unknown function (DUF1741); Int | 97.33 | |
| KOG4654 | 252 | consensus Uncharacterized conserved protein [Funct | 94.59 |
| >KOG2225 consensus Proteins containing regions of low-complexity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-122 Score=958.31 Aligned_cols=588 Identities=29% Similarity=0.479 Sum_probs=516.2
Q ss_pred CCCCCCcccccCCCCcchhHHHHHHhhCCccCCCCchhHHHhhcCCCCCCCCcc---------chHHHHHHHHHhcCCCc
Q 006691 1 MGGVPSTPRFADSRPQDTAEYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSH---------RVHQACEAFAQNNCYTR 71 (635)
Q Consensus 1 MG~~~Sk~~~~~~~~~~~~~~l~~~L~~~~~I~~~D~FW~qfws~p~s~~~p~e---------~l~~~~~~l~~nN~~t~ 71 (635)
||...||-. ++.+|.|+ +||+|-++.+++|||||+++++. +..|.| ++++.||.++.||.+||
T Consensus 1 mg~~itk~~-----~l~~n~~l-kk~~g~~~~~d~d~fwn~ll~~~--l~~~d~~ed~i~les~ld~~~q~~~~n~~~tg 72 (695)
T KOG2225|consen 1 MGSVITKET-----VLQENIYL-KKLSGLEPVDDYDPFWNKLLSFS--LKFDDDDEDRIALESALDDHLQCLMYNTQTTG 72 (695)
T ss_pred CCcccchhh-----hcchhHHH-HHhcCCCcCccccHHHHhhhhee--eecCCCcHHHhhhHHHHHHHHHHHhcCCcccC
Confidence 999999976 88999999 99999888888889999999994 544432 68888999999999999
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCchH-HHHHHHHHHHHHHhhhhheecCChhhHHHhhccc---------------CCCC
Q 006691 72 HLAKILIHLTWCLQECISSSGTASVA-IMKAINAVYISSVFLKYLIENAESENFEELHLSL---------------DESE 135 (635)
Q Consensus 72 Nl~tLi~~l~~rl~~l~~~~~~~~~~-~~qalNclriLtriLpyl~E~~~~~~~~~~fw~~---------------~~~e 135 (635)
||+++|+.+.+|..|++.++++++.. .||+.||++|+|.+.+|+-|.++|.++.+.|-.. +++|
T Consensus 73 nf~a~i~~fl~r~tel~t~~~~e~~~~~wqt~nal~ilr~i~r~l~q~~te~e~~~~f~~~~~s~~~ess~~~~~~~~~d 152 (695)
T KOG2225|consen 73 NFAAFIRLFLRRATELKTSEQCENKIYLWQTSNALLILRYIARFLTQRMTEKEFVRIFAKSHESTETESSSTSSSSDEED 152 (695)
T ss_pred cHHHHHHHHHHHHHhhcchHhhhcceeehhhccHHHHHHHHHHHHHhhccHHHHHHHHHhCcchhhhhhhhhcccCCccc
Confidence 99999999999999999988766655 8999999999999999999999998765544321 1111
Q ss_pred CCC-----c------C---cccchhHHHHHHHhhcccccccCCCchhhhHHHHHHHHHHHHhhhhcCCCCCCCCCCCchh
Q 006691 136 PLP-----K------E---FVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPF 201 (635)
Q Consensus 136 ~~~-----~------~---f~~~~~ve~~lweagvg~~~~vp~~~~t~~nr~EvLrlLLvllS~qLY~~~~~~~~~~~~~ 201 (635)
++. + . ...+.+.|.+ -.++|.+++.+|++..|+.+|+|++|||+|++|+|||... +.+.++.
T Consensus 153 ~~~~~~e~~~~~~a~~~~~iv~~~~~e~f-~~~lv~ili~i~v~e~t~~ih~eav~~l~tlLS~qLf~~~---~~~~SIv 228 (695)
T KOG2225|consen 153 DDEQKSENENNNGATKYIPIVFQNTAEEF-TYELVSILINISVNETTLAIHVEAVRCLLTLLSSQLFNES---IVNTSIV 228 (695)
T ss_pred chhHHhhccccCCccccceEEecccHHHH-HHHHHHheEEeeccceeehhhHHHHHHHHHHHHHHHhhhc---cccceeE
Confidence 100 0 0 1346788888 6699999999999999999999999999999999999985 5558888
Q ss_pred hHhhhcc-CccchHHHHHHHHHhhhcCCCCCCCCCcccccccCCCCcchhhhhhchhhhcccccccccccC----CCCCc
Q 006691 202 IDAAMTE-ESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSN----GEGSS 276 (635)
Q Consensus 202 l~~~~~~-~~~~~~~L~~SLL~n~i~~~~~p~~~~~y~~~~d~~~~g~~~~~gs~~~~~~~lpy~~l~~~~----~~d~~ 276 (635)
+++++.+ +.+|+..|+++||.|+++++++|+. .+..+.+||+++|++++.|++|.+-...-+.++ +.+-.
T Consensus 229 fr~~~~g~C~~ha~~L~ktLL~n~~r~~~~pH~-----~~q~s~~Gs~vfGlAss~~siftv~~~~gi~~~~aa~~peLs 303 (695)
T KOG2225|consen 229 FRFFIDGSCAKHAASLTKTLLLNYLRHNSEPHM-----TVQKSQEGSIVFGLASSMWSIFTVQMATGIDSAEAAKKPELS 303 (695)
T ss_pred EEeeecCchHHHHHHHHHHHHHHHHHhcCCCcc-----cccCCCCCceeeehhhHHHHHHHhhhccCcchhhhccCCCCC
Confidence 9999986 4789999999999999999998864 345566778999999999887777654333321 22345
Q ss_pred chHHHHHHHHHHHHhhcCCCCCCCCCcccCCCCCCCcccccccCCCCCCChHHHHhhcccccccccccccCCCCCC-Ccc
Q 006691 277 NPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSG-PVV 355 (635)
Q Consensus 277 ~~L~~~slqlLlvLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~fr~~L~~~~D~~f~~~~~~~~~~~~-~~~ 355 (635)
.||+++|+++||+|.+|++- ...||||+.|+.++|.|. ...-|..| ..+
T Consensus 304 ~PLaNqSlLLlL~Lsnh~~a--------------------------~dsNpyr~tl~sf~n~qd----ss~~P~qg~vsF 353 (695)
T KOG2225|consen 304 LPLANQSLLLLLNLSNHQPA--------------------------NDSNPYRETLASFQNAQD----SSTLPTQGIVSF 353 (695)
T ss_pred ccccchhHHHHHHHhcCCCc--------------------------ccCCHHHHHHHHhhcccc----cCCCCCCCceEE
Confidence 69999999999999998432 145999999999999882 23334333 379
Q ss_pred cccchhHHHHhcccCCchhHHHHHHHHhhcCccchhhhhcccchhhhHHHHHHHHHhcccCCCCchHHHHHHHHHhcCCc
Q 006691 356 RLPFASLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDS 435 (635)
Q Consensus 356 ~i~f~~l~~~~~~~~~~e~~~lLLy~ll~~N~~F~~~vl~~~~~~~lv~plL~~ly~~~~~~s~~v~m~l~iLL~LS~d~ 435 (635)
+|+|+++|+++|.+.++|+.++|||.|||.|++||+|+++|.|++++|+|||++||++++++||||||.+|+|||||+|+
T Consensus 354 qIdfn~lYe~LC~~~t~dqatLLLY~LLh~Ns~fr~yvl~r~dlEnLVvPiL~iLy~a~~~NSHHvYmaLIvlLILsEDd 433 (695)
T KOG2225|consen 354 QIDFNGLYERLCATATQDQATLLLYMLLHANSGFRNYVLSRIDLENLVVPILRILYDATSNNSHHVYMALIVLLILSEDD 433 (695)
T ss_pred EEehHHHHHHHHHHhccchhHHHHHHHHhccccHHHHHHhhccHHHhHHHHHHHHhcCCcCCccchHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCcccccccccccCchhHHHHHHHHHHhhccccccccccchhHHHHHhhhhhhhccCCHHHHHHHHHH
Q 006691 436 SFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSL 515 (635)
Q Consensus 436 ~F~~~l~~~~l~~ipw~~er~~~~~S~gdLlIlvl~r~I~~n~~~l~~~ylh~~cLa~LaN~sp~~~~Ls~~asqrLv~L 515 (635)
+|||.+|++++++|.||+||.++++|+|+++|+|++|+|||||.|+||+||||||||+|||||.+||+||+|+||||++|
T Consensus 434 gFnk~iHe~mlKnitWyser~v~EISLGglliLvviRtIQyNmlktRDkYLHTNCLAALANMSa~Fr~LhpyvaQRliSL 513 (695)
T KOG2225|consen 434 GFNKIIHETMLKNITWYSERSVREISLGGLLILVVIRTIQYNMLKTRDKYLHTNCLAALANMSAFFRNLHPYVAQRLISL 513 (695)
T ss_pred hhhHHHHHHHHhhccceecceeeeeeccceeeeeeHHHHHHHHHHhHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccC-CCCCCC-CchhhhhhhhhhhHHHHHHHHHHHHHHHHhhcCCCCcchhHhhhccccccccC
Q 006691 516 FYMLSRKYNKIADRRDDKK-GNLTEQ-DSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPF 593 (635)
Q Consensus 516 f~~ls~~~~~l~~~~~~~~-~~~~e~-~~~~~d~~~e~~~~~~~l~~lLEiiNsiL~~~~~~N~~LVYalL~~r~~F~~l 593 (635)
|+.++||+.|+.++++.+. +....+ .+..+|+.+|+.++|+++||+||||||||++++++||||||++||||++|+++
T Consensus 514 f~lLtkkH~k~~~q~~~s~~~~v~~nvst~P~d~~qDl~vlEEviRm~LEIiNScLtn~L~hnpnLvY~LLYkR~lFe~f 593 (695)
T KOG2225|consen 514 FDLLTKKHAKMVDQMRVSSQNDVADNVSTQPIDFHQDLTVLEEVIRMLLEIINSCLTNGLRHNPNLVYNLLYKRALFEAF 593 (695)
T ss_pred HHHHHHHHHHHHHHhhcccccccccCCCCCchhhHhhHHHHHHHHHHHHHHHHHHhhCccccCchHHHHHHHHHHHHHHH
Confidence 9999999999999887652 222222 22336899999999999999999999999999999999999999999999999
Q ss_pred cCCcchHHHHhhHHHHHHHhhhhHHH---------HHHHHHhhhcccccCC
Q 006691 594 KSHPRFNELLENIYTVSRWFLCQNLY---------ILSYIKYLDLAYHKDR 635 (635)
Q Consensus 594 ~~~~~f~~~~~ni~~v~~~f~~~~~~---------~l~~i~~~~~~~~~~~ 635 (635)
|+||+|||++|||+.|++||++|+.+ +|++|.+++-.||+||
T Consensus 594 r~Hp~FQD~lqNId~V~~~fssk~~~V~e~~g~~~~L~ii~k~a~~w~tdr 644 (695)
T KOG2225|consen 594 RQHPMFQDLLQNIDAVISHFSSKVIHVPEGDGGSTMLQIIEKEANIWPTDR 644 (695)
T ss_pred hhChhHHHHHHHHHHHHHhhhhheeeccccccchhHHHHHhcccccCchhh
Confidence 99999999999999999999999986 9999999999999998
|
|
| >PF09742 Dymeclin: Dyggve-Melchior-Clausen syndrome protein; InterPro: IPR019142 Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs | Back alignment and domain information |
|---|
| >PF12722 Hid1: High-temperature-induced dauer-formation protein | Back alignment and domain information |
|---|
| >KOG2226 consensus Proteins containing regions of low-complexity [General function prediction only] | Back alignment and domain information |
|---|
| >PF08427 DUF1741: Domain of unknown function (DUF1741); InterPro: IPR013636 This is a eukaryotic domain of unknown function | Back alignment and domain information |
|---|
| >KOG4654 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 635 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-08 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 1e-08
Identities = 88/575 (15%), Positives = 169/575 (29%), Gaps = 161/575 (28%)
Query: 80 LTWCLQECISSSGTASVAIMKAINAVY---ISSVFLKYLIENAESENFEELHLSL-DESE 135
L W L + + + Y +S + + + + + E L ++++
Sbjct: 67 LFWTL--LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 136 PLPKEFVLDQNIENLVMHSVLSFIALVDVSPHTY-NLHQELLNFM-------LVAMSTQL 187
K V L + L AL+++ P + + +
Sbjct: 125 VFAKYNV-----SRLQPYLKLR-QALLELRPAKNVLIDG-----VLGSGKTWVALDVCLS 173
Query: 188 LSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQ-P 246
V + +++ V ++++LL I S + S +I +
Sbjct: 174 YKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLLYQ-IDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 247 GVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDES---- 302
L+R LL S P +C LLVL++ V+N ++
Sbjct: 232 AELRR---------LL------------KSKPYENC----LLVLLN----VQNAKAWNAF 262
Query: 303 -------ITDRSDDSATSDSL-AKSSTHFTVNPYCNALEN-------ARDIEFGHMDLEG 347
+T R +D L A ++TH +++ + L + ++ DL
Sbjct: 263 NLSCKILLTTR--FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 348 NAHSGPVVRLPFA-SLF-----------DTLGMYLADETAVLLLYSLVQGNSG------- 388
+ P S+ D D+ ++ SL
Sbjct: 321 EVLTT----NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376
Query: 389 ----FLEYVLVRTDLDTLL---------MPILETLYNAS---KKTPNQIYMLLIILLILS 432
F + T L +L+ M ++ L+ S K+ + I L L
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436
Query: 433 QDSSFNASIHKMIL-------------PSVP-----WYKEHLL-HQTSLGSLLVIILIRT 473
++H+ I+ P +Y H+ H ++ + L R
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY-SHIGHHLKNIEHPERMTLFRM 495
Query: 474 VKYNLS----KLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADR 529
V + K+R ++ N + +L Y + Y I D
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASGSILNT---LQQLKFY-------------KPY--ICDN 537
Query: 530 RDDKKGNLTEQDSFAEDMSAELHI--YTDFLRIVL 562
+ + F + L YTD LRI L
Sbjct: 538 DPKYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00