Citrus Sinensis ID: 006811
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 630 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SSG3 | 695 | HIPL1 protein OS=Arabidop | yes | no | 0.934 | 0.847 | 0.697 | 0.0 | |
| Q94F08 | 696 | HIPL2 protein OS=Arabidop | no | no | 0.920 | 0.833 | 0.662 | 0.0 | |
| Q96JK4 | 782 | HHIP-like protein 1 OS=Ho | no | no | 0.755 | 0.608 | 0.291 | 1e-52 | |
| Q6UWX4 | 724 | HHIP-like protein 2 OS=Ho | no | no | 0.741 | 0.645 | 0.294 | 5e-52 | |
| Q14DK5 | 791 | HHIP-like protein 1 OS=Mu | yes | no | 0.757 | 0.603 | 0.302 | 1e-51 | |
| Q9D2G9 | 717 | HHIP-like protein 2 OS=Mu | no | no | 0.755 | 0.663 | 0.287 | 3e-50 | |
| Q96QV1 | 700 | Hedgehog-interacting prot | no | no | 0.685 | 0.617 | 0.232 | 3e-24 | |
| Q7TN16 | 700 | Hedgehog-interacting prot | no | no | 0.682 | 0.614 | 0.233 | 5e-24 | |
| P13650 | 478 | Quinoprotein glucose dehy | no | no | 0.341 | 0.449 | 0.252 | 2e-11 | |
| P73001 | 412 | Uncharacterized protein s | N/A | no | 0.263 | 0.402 | 0.25 | 1e-07 |
| >sp|Q9SSG3|HIPL1_ARATH HIPL1 protein OS=Arabidopsis thaliana GN=HIPL1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/598 (69%), Positives = 488/598 (81%), Gaps = 9/598 (1%)
Query: 1 MNISDSGCSSLLKSILCAKCDQFAGELFTAGSVVRPVPLLCNSTGSNSSQSSKATITDFC 60
MNISD GC+S++KSILCA CD F+ +LF S + VP+LCNST SS + +FC
Sbjct: 66 MNISDKGCASVVKSILCANCDPFSSDLFRDNSDQQSVPILCNST------SSANSTENFC 119
Query: 61 SEVWDTCQNVSVRNSPFSPSLQGQAGAPVSSNFTKLTEFWQSKADFCNAFGGTSKDGSVC 120
SE W+TCQNVS+ S F+ SLQG+AGAP + N +KL + WQSK DFC+AFGG S + +VC
Sbjct: 120 SETWETCQNVSISGSLFAASLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVC 179
Query: 121 FNGEPVTLN-NTGTPN-PPQGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIP 178
F+GEPV LN N TP+ PP G+CLEKIGNGSYLNMV HPDGSNRAFFS Q G ++LA IP
Sbjct: 180 FSGEPVALNDNDTTPDKPPSGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIP 239
Query: 179 EQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGC 238
+Q G +++D SSPF D+TDE+HFDTEFG+MGMAFHP FA+NGRFFASFNCDK KWPGC
Sbjct: 240 DQDSGGVLDVDPSSPFVDMTDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGC 299
Query: 239 AGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 298
GRCSCNSDVNCDPSKL D+G+QPCQYQTV+AEYT N T+S+PS AK AKP+EVRRIFT
Sbjct: 300 TGRCSCNSDVNCDPSKLTPDSGSQPCQYQTVIAEYTANSTSSDPSKAKNAKPTEVRRIFT 359
Query: 299 MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSA 358
MGL F HH GQ+LFGP DGY+YFMMGDGGG ADPYNF+QNKKSLLGKI RLDVDNIPSA
Sbjct: 360 MGLPFTSHHAGQILFGP-DGYLYFMMGDGGGGADPYNFAQNKKSLLGKIMRLDVDNIPSA 418
Query: 359 AEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 418
+EI K+GLWG+YSIPKDNPF ED L+PEIWA+GLRNPWRCSFDS RPSYFMCADVGQD
Sbjct: 419 SEISKMGLWGNYSIPKDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDT 478
Query: 419 YEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSA 478
YEEVD+I++GGNYGWR+YEGP LF P +PGG T + S++PIFPV+GYNHSEV+ SA
Sbjct: 479 YEEVDLISKGGNYGWRVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSA 538
Query: 479 SITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQC 538
SITGGYFYRS TDPC+ GRY+YADLY +WA E+P NSG+F T + FSCA DSP++C
Sbjct: 539 SITGGYFYRSETDPCIAGRYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKC 598
Query: 539 KVLPGNDLPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPG 596
PG SLGY++SFGEDN KDI++LTS+GVYRVVRPSRC+ TCSKEN+T PG
Sbjct: 599 SDSPGTSGLSLGYVFSFGEDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTARRNPG 656
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94F08|HIPL2_ARATH HIPL2 protein OS=Arabidopsis thaliana GN=HIPL2 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q96JK4|HIPL1_HUMAN HHIP-like protein 1 OS=Homo sapiens GN=HHIPL1 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q6UWX4|HIPL2_HUMAN HHIP-like protein 2 OS=Homo sapiens GN=HHIPL2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q14DK5|HIPL1_MOUSE HHIP-like protein 1 OS=Mus musculus GN=Hhipl1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9D2G9|HIPL2_MOUSE HHIP-like protein 2 OS=Mus musculus GN=Hhipl2 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q96QV1|HHIP_HUMAN Hedgehog-interacting protein OS=Homo sapiens GN=HHIP PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q7TN16|HHIP_MOUSE Hedgehog-interacting protein OS=Mus musculus GN=Hhip PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|P13650|DHGB_ACICA Quinoprotein glucose dehydrogenase B OS=Acinetobacter calcoaceticus GN=gdhB PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P73001|Y1608_SYNY3 Uncharacterized protein slr1608 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1608 PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 630 | ||||||
| 255540863 | 698 | HIPL1 protein precursor, putative [Ricin | 0.976 | 0.881 | 0.757 | 0.0 | |
| 224133338 | 697 | predicted protein [Populus trichocarpa] | 0.938 | 0.847 | 0.770 | 0.0 | |
| 356508614 | 693 | PREDICTED: HIPL1 protein-like [Glycine m | 0.928 | 0.844 | 0.751 | 0.0 | |
| 356516736 | 694 | PREDICTED: HIPL1 protein-like [Glycine m | 0.928 | 0.842 | 0.744 | 0.0 | |
| 449469480 | 696 | PREDICTED: HIPL1 protein-like [Cucumis s | 0.939 | 0.850 | 0.731 | 0.0 | |
| 297734050 | 696 | unnamed protein product [Vitis vinifera] | 0.928 | 0.840 | 0.752 | 0.0 | |
| 225456616 | 724 | PREDICTED: HIPL1 protein-like [Vitis vin | 0.928 | 0.808 | 0.752 | 0.0 | |
| 357504203 | 697 | Hedgehog-interacting protein [Medicago t | 0.931 | 0.842 | 0.75 | 0.0 | |
| 359473388 | 937 | PREDICTED: HIPL1 protein-like [Vitis vin | 0.934 | 0.628 | 0.711 | 0.0 | |
| 296086453 | 702 | unnamed protein product [Vitis vinifera] | 0.934 | 0.839 | 0.711 | 0.0 |
| >gi|255540863|ref|XP_002511496.1| HIPL1 protein precursor, putative [Ricinus communis] gi|223550611|gb|EEF52098.1| HIPL1 protein precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 970 bits (2507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/618 (75%), Positives = 527/618 (85%), Gaps = 3/618 (0%)
Query: 1 MNISDSGCSSLLKSILCAKCDQFAGELFTAGSVVRPVPLLCNSTGSNSSQSSKATITDFC 60
MNIS+ GC+SLLKSILCA+CD F+GELF SV RPVP+LCNST S +S S T+ DFC
Sbjct: 66 MNISNPGCASLLKSILCARCDPFSGELFIINSVQRPVPVLCNSTASANSSQSGQTVNDFC 125
Query: 61 SEVWDTCQNVSVRNSPFSPSLQGQAGAPVSSNFTKLTEFWQSKADFCNAFGGTSKDGSVC 120
S+VWDTC+NVS+ NSPF+PSL+GQAG PV+S+ T LT+ WQSK DFC AFGG S DGSVC
Sbjct: 126 SKVWDTCENVSISNSPFAPSLKGQAGLPVNSSITTLTDLWQSKTDFCKAFGGESSDGSVC 185
Query: 121 FNGEPVTLNNTGTPNPPQGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQ 180
+NGEPVTLN+T TPNPP GLCLEKIGNGSYLNMVAHPDGSNRAFFS+Q GKIWLATIPE+
Sbjct: 186 YNGEPVTLNDTETPNPPHGLCLEKIGNGSYLNMVAHPDGSNRAFFSSQPGKIWLATIPEE 245
Query: 181 GLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGCAG 240
G G T+E+D SSPF DLTDEV+F + FG+MGMAFHPNFA+NGRFFASFNCDKV+WPGC G
Sbjct: 246 GSGGTLEIDESSPFIDLTDEVYFSSAFGMMGMAFHPNFAQNGRFFASFNCDKVRWPGCVG 305
Query: 241 RCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMG 300
RCSCNSDVNCDPSKL DNGAQPCQY TV+AEY+ NGTA SLA AKP EVRRIFTMG
Sbjct: 306 RCSCNSDVNCDPSKLPPDNGAQPCQYHTVIAEYSANGTADGGSLATTAKPFEVRRIFTMG 365
Query: 301 LSFNGHHGGQLLFGPTDGYMYFMM---GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPS 357
L F HHGGQ+LFGPTDGY+YFMM G G + DPYNF QNKKSLLGKI RLDVDNIPS
Sbjct: 366 LPFTSHHGGQILFGPTDGYLYFMMGDGGGPGDSGDPYNFCQNKKSLLGKIMRLDVDNIPS 425
Query: 358 AAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQD 417
A EI LG WG+YS PKDNPFSED L PEIWALGLRNPWRCSFDS+RPSYFMCADVGQD
Sbjct: 426 AEEISTLGRWGNYSTPKDNPFSEDKDLLPEIWALGLRNPWRCSFDSERPSYFMCADVGQD 485
Query: 418 VYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGS 477
VYEEVDIIT+GGNYGWR+YEGPY + P +PGG TP NS+SPIFPV+GYNHSEVNK EGS
Sbjct: 486 VYEEVDIITKGGNYGWRVYEGPYRYNPKSSPGGNTPPNSISPIFPVMGYNHSEVNKNEGS 545
Query: 478 ASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQ 537
ASITGGYFYRS TDPCM+GRYLYADLYA+ LWA +E+PE SGNFT+++IPFSCA+DSP+Q
Sbjct: 546 ASITGGYFYRSKTDPCMYGRYLYADLYASGLWAGTETPEGSGNFTSNRIPFSCAKDSPVQ 605
Query: 538 CKVLPGNDLPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPGP 597
C + G+ LPSLGYI+SFGEDNR+D+F+L S GVYRVVRPSRC+YTCSKEN T P P
Sbjct: 606 CTSVAGSSLPSLGYIFSFGEDNRRDVFLLASSGVYRVVRPSRCNYTCSKENETAVGSPSP 665
Query: 598 ATSPNSFANRLRDPYNSL 615
TSP S A +L PY+++
Sbjct: 666 TTSPPSHAGQLHCPYSTI 683
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133338|ref|XP_002321542.1| predicted protein [Populus trichocarpa] gi|222868538|gb|EEF05669.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356508614|ref|XP_003523050.1| PREDICTED: HIPL1 protein-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356516736|ref|XP_003527049.1| PREDICTED: HIPL1 protein-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449469480|ref|XP_004152448.1| PREDICTED: HIPL1 protein-like [Cucumis sativus] gi|449487801|ref|XP_004157807.1| PREDICTED: HIPL1 protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297734050|emb|CBI15297.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225456616|ref|XP_002266458.1| PREDICTED: HIPL1 protein-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357504203|ref|XP_003622390.1| Hedgehog-interacting protein [Medicago truncatula] gi|355497405|gb|AES78608.1| Hedgehog-interacting protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|359473388|ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296086453|emb|CBI32042.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 630 | ||||||
| TAIR|locus:2027273 | 695 | AT1G74790 [Arabidopsis thalian | 0.946 | 0.857 | 0.667 | 5.1e-232 | |
| TAIR|locus:2172224 | 696 | HIPL2 "hipl2 protein precursor | 0.930 | 0.841 | 0.648 | 5e-218 | |
| TAIR|locus:2178027 | 690 | AT5G39970 [Arabidopsis thalian | 0.939 | 0.857 | 0.561 | 6.5e-193 | |
| MGI|MGI:1919265 | 791 | Hhipl1 "hedgehog interacting p | 0.393 | 0.313 | 0.366 | 1.5e-46 | |
| RGD|1311698 | 791 | Hhipl1 "HHIP-like 1" [Rattus n | 0.393 | 0.313 | 0.366 | 1.1e-45 | |
| UNIPROTKB|Q96JK4 | 782 | HHIPL1 "HHIP-like protein 1" [ | 0.377 | 0.304 | 0.383 | 3.9e-45 | |
| UNIPROTKB|F1NC92 | 551 | HHIPL1 "Uncharacterized protei | 0.417 | 0.477 | 0.337 | 2.2e-44 | |
| UNIPROTKB|F1MI35 | 786 | HHIPL1 "Uncharacterized protei | 0.393 | 0.315 | 0.352 | 1e-42 | |
| UNIPROTKB|F1S9I3 | 717 | HHIPL2 "Uncharacterized protei | 0.328 | 0.288 | 0.360 | 6.6e-40 | |
| UNIPROTKB|Q6UWX4 | 724 | HHIPL2 "HHIP-like protein 2" [ | 0.307 | 0.267 | 0.363 | 9.6e-40 |
| TAIR|locus:2027273 AT1G74790 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2238 (792.9 bits), Expect = 5.1e-232, P = 5.1e-232
Identities = 404/605 (66%), Positives = 476/605 (78%)
Query: 1 MNISDSGCSSLLKSILCAKCDQFAGELFTAGSVVRPVPLLCNXXXXXXXXXXKATITDFC 60
MNISD GC+S++KSILCA CD F+ +LF S + VP+LCN +FC
Sbjct: 66 MNISDKGCASVVKSILCANCDPFSSDLFRDNSDQQSVPILCNSTSSANSTE------NFC 119
Query: 61 SEVWDTCQNVSVRNSPFSPSLQGQAGAPVSSNFTKLTEFWQSKADFCNAFGGTSKDGSVC 120
SE W+TCQNVS+ S F+ SLQG+AGAP + N +KL + WQSK DFC+AFGG S + +VC
Sbjct: 120 SETWETCQNVSISGSLFAASLQGRAGAPSNKNASKLADLWQSKTDFCSAFGGASSNETVC 179
Query: 121 FNGEPVTLN-NTGTPN-PPQGLCLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIP 178
F+GEPV LN N TP+ PP G+CLEKIGNGSYLNMV HPDGSNRAFFS Q G ++LA IP
Sbjct: 180 FSGEPVALNDNDTTPDKPPSGICLEKIGNGSYLNMVPHPDGSNRAFFSTQPGIVFLAGIP 239
Query: 179 EQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGC 238
+Q G +++D SSPF D+TDE+HFDTEFG+MGMAFHP FA+NGRFFASFNCDK KWPGC
Sbjct: 240 DQDSGGVLDVDPSSPFVDMTDEIHFDTEFGMMGMAFHPKFAQNGRFFASFNCDKSKWPGC 299
Query: 239 AGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 298
GRCSCNSDVNCDPSKL D+G+QPCQYQTV+AEYT N T+S+PS AK AKP+EVRRIFT
Sbjct: 300 TGRCSCNSDVNCDPSKLTPDSGSQPCQYQTVIAEYTANSTSSDPSKAKNAKPTEVRRIFT 359
Query: 299 MGLSFNGHHGGQLLFGPTXXXXXXXXXXXXXTADPYNFSQNKKSLLGKITRLDVDNIPSA 358
MGL F HH GQ+LFGP ADPYNF+QNKKSLLGKI RLDVDNIPSA
Sbjct: 360 MGLPFTSHHAGQILFGPDGYLYFMMGDGGGG-ADPYNFAQNKKSLLGKIMRLDVDNIPSA 418
Query: 359 AEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 418
+EI K+GLWG+YSIPKDNPF ED L+PEIWA+GLRNPWRCSFDS RPSYFMCADVGQD
Sbjct: 419 SEISKMGLWGNYSIPKDNPFREDKELEPEIWAVGLRNPWRCSFDSSRPSYFMCADVGQDT 478
Query: 419 YEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSA 478
YEEVD+I++GGNYGWR+YEGP LF P +PGG T + S++PIFPV+GYNHSEV+ SA
Sbjct: 479 YEEVDLISKGGNYGWRVYEGPDLFHPESSPGGNTSVKSLNPIFPVMGYNHSEVDSSGKSA 538
Query: 479 SITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQC 538
SITGGYFYRS TDPC+ GRY+YADLY +WA E+P NSG+F T + FSCA DSP++C
Sbjct: 539 SITGGYFYRSETDPCIAGRYVYADLYGNGVWAGIETPANSGSFVTKRTTFSCASDSPMKC 598
Query: 539 KVLPGNDLPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPGPA 598
PG SLGY++SFGEDN KDI++LTS+GVYRVVRPSRC+ TCSKEN+T PG +
Sbjct: 599 SDSPGTSGLSLGYVFSFGEDNNKDIYLLTSNGVYRVVRPSRCNLTCSKENSTARRNPGTS 658
Query: 599 TSPNS 603
+SP+S
Sbjct: 659 SSPSS 663
|
|
| TAIR|locus:2172224 HIPL2 "hipl2 protein precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178027 AT5G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1919265 Hhipl1 "hedgehog interacting protein-like 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1311698 Hhipl1 "HHIP-like 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96JK4 HHIPL1 "HHIP-like protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NC92 HHIPL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MI35 HHIPL1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1S9I3 HHIPL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6UWX4 HHIPL2 "HHIP-like protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SSG3 | HIPL1_ARATH | No assigned EC number | 0.6973 | 0.9349 | 0.8474 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | eugene3.00150459 | hypothetical protein (697 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 630 | |||
| pfam07995 | 324 | pfam07995, GSDH, Glucose / Sorbosone dehydrogenase | 3e-28 | |
| COG2133 | 399 | COG2133, COG2133, Glucose/sorbosone dehydrogenases | 2e-19 | |
| TIGR03606 | 454 | TIGR03606, non_repeat_PQQ, dehydrogenase, PQQ-depe | 1e-13 |
| >gnl|CDD|219689 pfam07995, GSDH, Glucose / Sorbosone dehydrogenase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 81/283 (28%), Positives = 116/283 (40%), Gaps = 74/283 (26%)
Query: 153 MVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGM 212
+ PDG R + + G++ L + G S+P A + EV + GL+ +
Sbjct: 6 LAFLPDG--RLLVTERPGRLRL--VDADG-------KLSTPVAGV-PEVVARGQGGLLDV 53
Query: 213 AFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAE 272
A HP+FA N + S+ D G T VA
Sbjct: 54 ALHPDFATNRTIYLSYAEG-------------------------DDGGNG-----TAVAR 83
Query: 273 YTVNGTASEPSLAKRAKPSEVRRIFTM--GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGT 330
++ +L +V IF +S GH G ++ FGP DG +Y GD G
Sbjct: 84 ARLSDD--GTAL------EDVEVIFRQIPKVSGGGHFGSRIAFGP-DGTLYITTGDRG-- 132
Query: 331 ADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWA 390
D N +Q+ S LGKI RL+ D GS +P DNPF G +PEIW+
Sbjct: 133 -DRDN-AQDLSSHLGKILRLNPD--------------GS--VPADNPFVGRGGAKPEIWS 174
Query: 391 LGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGW 433
G RNP +FD D + + G +E+++I G NYGW
Sbjct: 175 YGHRNPQGLAFDPDTGRLWA-HEHGPRGGDEINLIEPGKNYGW 216
|
Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold. Length = 324 |
| >gnl|CDD|225044 COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|234278 TIGR03606, non_repeat_PQQ, dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 630 | |||
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 100.0 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 100.0 | |
| COG2133 | 399 | Glucose/sorbosone dehydrogenases [Carbohydrate tra | 100.0 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 100.0 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.46 | |
| PF03024 | 167 | Folate_rec: Folate receptor family; InterPro: IPR0 | 98.46 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.92 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.71 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.11 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.36 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 95.15 | |
| KOG4659 | 1899 | consensus Uncharacterized conserved protein (Rhs f | 93.38 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 93.3 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 92.84 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 92.67 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 92.24 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 92.06 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 90.87 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 90.64 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 89.83 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 89.3 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 84.61 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 81.74 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 81.47 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 80.75 | |
| PF01436 | 28 | NHL: NHL repeat; InterPro: IPR001258 The NHL repea | 80.47 |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-61 Score=522.49 Aligned_cols=349 Identities=23% Similarity=0.423 Sum_probs=258.9
Q ss_pred CCCCCcEEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceee
Q 006811 135 NPPQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 211 (630)
Q Consensus 135 ~~p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLG 211 (630)
+.|.+|++|+|++||. |+|+++||| ||||+|| .|+|++++ ++++. ..+++++...+...+|+||||
T Consensus 15 ~~p~~f~~~~va~GL~~Pw~maflPDG--~llVtER~~G~I~~v~-~~~~~--------~~~~~~l~~v~~~~ge~GLlg 83 (454)
T TIGR03606 15 AASENFDKKVLLSGLNKPWALLWGPDN--QLWVTERATGKILRVN-PETGE--------VKVVFTLPEIVNDAQHNGLLG 83 (454)
T ss_pred cCCCCcEEEEEECCCCCceEEEEcCCC--eEEEEEecCCEEEEEe-CCCCc--------eeeeecCCceeccCCCCceee
Confidence 4588999999999998 999999999 8999999 69999985 33222 234456643333347999999
Q ss_pred eeeCCCC---CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccC
Q 006811 212 MAFHPNF---AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRA 288 (630)
Q Consensus 212 iAfhPdF---~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~ 288 (630)
|||||+| ++|++|||+|+....... . ....+|+||+++... .
T Consensus 84 lal~PdF~~~~~n~~lYvsyt~~~~~~~-------------------------~--~~~~~I~R~~l~~~~--------~ 128 (454)
T TIGR03606 84 LALHPDFMQEKGNPYVYISYTYKNGDKE-------------------------L--PNHTKIVRYTYDKST--------Q 128 (454)
T ss_pred EEECCCccccCCCcEEEEEEeccCCCCC-------------------------c--cCCcEEEEEEecCCC--------C
Confidence 9999999 999999999996432100 0 013599999985431 1
Q ss_pred CCCCcEEEEEeccCC-CCccceeeEEcCCCCeEEEEeCCCCCCC-----Ccc----------cccccCCCCCeeEEEEec
Q 006811 289 KPSEVRRIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTA-----DPY----------NFSQNKKSLLGKITRLDV 352 (630)
Q Consensus 289 ~~~~~~~Il~~~~P~-~~H~GG~L~FGp~DG~LYv~~GDgg~~~-----DP~----------~~aQn~~sl~GKILRIdv 352 (630)
.+.++++||+ ++|. ..|+|++|+|+| ||+|||++||++... .|. .++|++++++|||||||+
T Consensus 129 ~l~~~~~Il~-~lP~~~~H~GgrI~FgP-DG~LYVs~GD~g~~~~~n~~~~~~aQ~~~~~~~~~~~d~~~~~GkILRin~ 206 (454)
T TIGR03606 129 TLEKPVDLLA-GLPAGNDHNGGRLVFGP-DGKIYYTIGEQGRNQGANFFLPNQAQHTPTQQELNGKDYHAYMGKVLRLNL 206 (454)
T ss_pred ccccceEEEe-cCCCCCCcCCceEEECC-CCcEEEEECCCCCCCcccccCcchhccccccccccccCcccCceEEEEEcC
Confidence 2345677885 5675 579999999999 999999999986421 110 123488899999999999
Q ss_pred CCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCC
Q 006811 353 DNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYG 432 (630)
Q Consensus 353 Dg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYG 432 (630)
|| +||+||||++ ++++||||||||||||++||| +| +||++|||++.+||||+|++|+|||
T Consensus 207 DG----------------siP~dNPf~~--g~~~eIyA~G~RNp~Gla~dp-~G-~Lw~~e~Gp~~~DEiN~I~~G~NYG 266 (454)
T TIGR03606 207 DG----------------SIPKDNPSIN--GVVSHIFTYGHRNPQGLAFTP-DG-TLYASEQGPNSDDELNIIVKGGNYG 266 (454)
T ss_pred CC----------------CCCCCCCccC--CCcceEEEEeccccceeEECC-CC-CEEEEecCCCCCcEEEEeccCCcCC
Confidence 99 8999999984 678999999999999999999 67 5999999999999999999999999
Q ss_pred cccccCCC--------cCCCCC-----------CCCCCC-----CCCCCCCCCceee-cc-------CCccCC-----CC
Q 006811 433 WRLYEGPY--------LFTPLE-----------TPGGIT-----PLNSVSPIFPVLG-YN-------HSEVNK-----KE 475 (630)
Q Consensus 433 Wp~~eG~~--------~~~p~~-----------~p~~~~-----~~~~~~~i~Pi~~-y~-------H~~~~~-----~~ 475 (630)
||.++|.. .|.... .+.+.. ......++.|++. |. |.-... ..
T Consensus 267 WP~~~G~~~~~~~~~~~ys~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (454)
T TIGR03606 267 WPNVAGYKDDSGYVYANYSAAANKSIKTLAQNGIPAGVPVTKESEWTAKNFVPPLKTLYTVQDTYNYNDATCGEMTYICW 346 (454)
T ss_pred CCceeecCccccccccccccccccccccccccccCcCccccccccccCccccCCceeccccccccccccccccccccccC
Confidence 99999732 222110 010100 0111258899974 20 110000 13
Q ss_pred CCccccceeeec--CCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCCCccc
Q 006811 476 GSASITGGYFYR--SMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIY 553 (630)
Q Consensus 476 gs~S~tGg~vYr--G~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~gri~ 553 (630)
+++|++|+.||+ |++||+|.|.+|++-+..++|+++.++.+. ++.+..+.. ++...+|||
T Consensus 347 psiapsg~~~y~~~g~~~p~w~g~llv~~L~~~~l~r~~l~~~~-~~v~~~~~~-----------------~~~~~~RiR 408 (454)
T TIGR03606 347 PTIAPSSAYYYKGGEKGITGWENSLLIPSLKRGVIYRIKLDPDY-STVYGDAVP-----------------MFKTNNRYR 408 (454)
T ss_pred CCcCCceeEEEecCcccCcccCCCEEEEEcCCCeEEEEEecCCc-ceecceeEE-----------------eecCCCeeE
Confidence 779999999999 699999999999999999999999876431 111101111 111257999
Q ss_pred eEEEcCCC-cEEEEeCC
Q 006811 554 SFGEDNRK-DIFILTSD 569 (630)
Q Consensus 554 sf~ed~dG-eLYvlts~ 569 (630)
+|.++||| .|||++++
T Consensus 409 dv~~~pDg~~iy~~td~ 425 (454)
T TIGR03606 409 DVIASPDGNVLYVATDN 425 (454)
T ss_pred EEEECCCCCEEEEEEcC
Confidence 99999997 99999973
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
| >COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
| >PF03024 Folate_rec: Folate receptor family; InterPro: IPR018143 This entry represents a domain found in folate receptors and at the N terminus of hedgehog-interacting proteins | Back alignment and domain information |
|---|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
| >KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown] | Back alignment and domain information |
|---|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 630 | ||||
| 2wg3_C | 463 | Crystal Structure Of The Complex Between Human Hedg | 5e-17 | ||
| 2wg4_B | 457 | Crystal Structure Of The Complex Between Human Hedg | 5e-17 | ||
| 2wft_A | 458 | Crystal Structure Of The Human Hip Ectodomain Lengt | 6e-17 | ||
| 3ho3_A | 481 | Crystal Structure Of Hedgehog-interacting Protein ( | 6e-17 | ||
| 3ho4_A | 481 | Crystal Structure Of Hedgehog-Interacting Protein ( | 6e-17 | ||
| 3a9g_A | 354 | Crystal Structure Of Pqq-Dependent Sugar Dehydrogen | 2e-08 | ||
| 1cru_A | 454 | Soluble Quinoprotein Glucose Dehydrogenase From Aci | 8e-08 | ||
| 2ism_A | 352 | Crystal Structure Of The Putative Oxidoreductase (G | 5e-07 | ||
| 2g8s_A | 353 | Crystal Structure Of The Soluble Aldose Sugar Dehyd | 9e-06 | ||
| 3das_A | 347 | Structure Of The Pqq-Bound Form Of Aldose Sugar Deh | 6e-05 |
| >pdb|2WG3|C Chain C, Crystal Structure Of The Complex Between Human Hedgehog- Interacting Protein Hip And Desert Hedgehog Without Calcium Length = 463 | Back alignment and structure |
|
| >pdb|2WFT|A Chain A, Crystal Structure Of The Human Hip Ectodomain Length = 458 | Back alignment and structure |
| >pdb|3HO3|A Chain A, Crystal Structure Of Hedgehog-interacting Protein (hhip) Length = 481 | Back alignment and structure |
| >pdb|3HO4|A Chain A, Crystal Structure Of Hedgehog-Interacting Protein (Hhip) Length = 481 | Back alignment and structure |
| >pdb|3A9G|A Chain A, Crystal Structure Of Pqq-Dependent Sugar Dehydrogenase Apo-Form Length = 354 | Back alignment and structure |
| >pdb|1CRU|A Chain A, Soluble Quinoprotein Glucose Dehydrogenase From Acinetobacter Calcoaceticus In Complex With Pqq And Methylhydrazine Length = 454 | Back alignment and structure |
| >pdb|2ISM|A Chain A, Crystal Structure Of The Putative Oxidoreductase (Glucose Dehydrogenase) (Ttha0570) From Thermus Theromophilus Hb8 Length = 352 | Back alignment and structure |
| >pdb|2G8S|A Chain A, Crystal Structure Of The Soluble Aldose Sugar Dehydrogenase (Asd) From Escherichia Coli In The Apo-Form Length = 353 | Back alignment and structure |
| >pdb|3DAS|A Chain A, Structure Of The Pqq-Bound Form Of Aldose Sugar Dehydrogenase (Adh) From Streptomyces Coelicolor Length = 347 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463 | Back alignment and structure |
|---|
Score = 300 bits (769), Expect = 2e-95
Identities = 99/482 (20%), Positives = 160/482 (33%), Gaps = 104/482 (21%)
Query: 139 GLCLEKIGNG--SYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFAD 196
C++++ +G + + DGS R F +EG + + T PE + P+ D
Sbjct: 3 CFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-PEGEI-------FKEPYLD 54
Query: 197 LTDEVHFDT----EFGLMGMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDP 252
+ V E GL+ +AFHPN+ KNG+ + S+ +
Sbjct: 55 IHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN--------------------- 93
Query: 253 SKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQLL 312
+ P + V EYTV+ + R + H GGQLL
Sbjct: 94 ---QERWAIGPHDHILRVVEYTVSRKNPH-----QVDLRTARVFLEVAELHRKHLGGQLL 145
Query: 313 FGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSI 372
FGP DG++Y ++GDG T D G + RLDVD YSI
Sbjct: 146 FGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCN---------VPYSI 195
Query: 373 PKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPS-----YFMCADVGQDVYEEVDI--I 425
P+ NP + PE++A GL +P RC+ D +C+D I I
Sbjct: 196 PRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQI 255
Query: 426 TRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYF 485
+G +Y +L + + + GG+
Sbjct: 256 IKGKDYESE--------------------------PSLLEFKPF------SNGPLVGGFV 283
Query: 486 YRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGND 545
YR ++G Y++ D +SP ++ P+
Sbjct: 284 YRGCQSERLYGSYVFGD-RNGNFLTLQQSPVTKQW-----------QEKPLCLGTSGSCR 331
Query: 546 LPSLGYIYSFGEDNRKDIFILTSDGVYRVVRPSRCSYTCSKENTTVSAGPGPATSPNSFA 605
G+I FGED +++IL+S + + + P
Sbjct: 332 GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPLMPEECRATVQPAQTL 391
Query: 606 NR 607
Sbjct: 392 TS 393
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A Length = 454 | Back alignment and structure |
|---|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Length = 352 | Back alignment and structure |
|---|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} Length = 347 | Back alignment and structure |
|---|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* Length = 354 | Back alignment and structure |
|---|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} Length = 353 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 630 | |||
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 100.0 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 100.0 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 100.0 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 100.0 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 100.0 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 100.0 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.53 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.5 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.48 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.45 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.43 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.4 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.37 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.26 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.22 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.21 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.2 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.18 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.18 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.15 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.09 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.08 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.04 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.03 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.98 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.93 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.91 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.87 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.82 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.76 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.69 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.67 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 97.65 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.64 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.61 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.58 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.56 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.54 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.54 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.48 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.44 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.43 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.4 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.4 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.38 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.37 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.32 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.28 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.18 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.18 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.09 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.0 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 96.85 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 96.84 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 96.82 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 96.81 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 96.79 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.66 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.66 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.65 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.64 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.54 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.54 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 96.51 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 96.39 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.38 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.38 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 96.36 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.32 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 96.3 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 96.23 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 96.22 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 96.1 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.03 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 95.96 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 95.95 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 95.85 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 95.18 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 95.16 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 95.0 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 94.89 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 94.78 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 94.72 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 94.72 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 94.31 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 94.19 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.05 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 93.37 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 91.7 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 91.39 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 91.05 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 89.9 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 89.89 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 89.21 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 89.11 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 89.01 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 88.71 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 88.67 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 88.65 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 88.2 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 87.17 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 86.84 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 86.59 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 86.49 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 85.92 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 85.89 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 85.85 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 85.63 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 85.59 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 85.32 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 85.05 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 85.03 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 84.94 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 84.79 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 84.6 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 84.18 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 83.96 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 83.51 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 83.18 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 82.8 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 82.71 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 82.42 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 82.03 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 81.28 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 81.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 80.51 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 80.46 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 80.04 |
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-67 Score=577.74 Aligned_cols=353 Identities=29% Similarity=0.568 Sum_probs=271.3
Q ss_pred CCCcEEEEEeeCce--eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceee----CCCCcee
Q 006811 137 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHF----DTEFGLM 210 (630)
Q Consensus 137 p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~----~~e~GLL 210 (630)
+.||++|+||+||. |+|+++|||++||||+||.|+|++++ + ++. . .+++++|+.+.+.. .+|+|||
T Consensus 1 ~~gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~-~-~g~--~----~~~~~~~~~~~~~~g~~~~~e~Gll 72 (463)
T 2wg3_C 1 HNCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-P-EGE--I----FKEPYLDIHKLVQSGIKGGDERGLL 72 (463)
T ss_dssp -CCEEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEEC-T-TSC--B----CSSCSEECTTTBCCCCSSSCCCSEE
T ss_pred CCceEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEe-C-CCC--e----eeeeecCCcceeccCccccCCCcce
Confidence 36899999999998 99999999988999999999999985 2 232 1 24678888654432 3599999
Q ss_pred eeeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCC
Q 006811 211 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKP 290 (630)
Q Consensus 211 GiAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~ 290 (630)
||||||+|++|++|||+|+.....+. + .+.....+|+||+++.... ..+++
T Consensus 73 gia~~P~f~~n~~lYv~yt~~~~~~~----------------------~--~~~~~~~~v~r~~~~~~~~-----~~~d~ 123 (463)
T 2wg3_C 73 SLAFHPNYKKNGKLYVSYTTNQERWA----------------------I--GPHDHILRVVEYTVSRKNP-----HQVDL 123 (463)
T ss_dssp EEEECTTHHHHCEEEEEEEECCCSSC----------------------S--SSSCEEEEEEEEEBCTTCT-----TSBCG
T ss_pred eeEeCCCCcCCCEEEEEEeCCCCCcc----------------------c--CCcccceEEEEEEEcCCCC-----CccCC
Confidence 99999999999999999997543211 0 1223457999999864311 13445
Q ss_pred CCcEEEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 006811 291 SEVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 370 (630)
Q Consensus 291 ~~~~~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 370 (630)
.++++|+++..+...|+|++|+|+| ||+|||++||+++..++..++|++.+++|||||||+||. +.+++|
T Consensus 124 ~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~---------~~~~~y 193 (463)
T 2wg3_C 124 RTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD---------MCNVPY 193 (463)
T ss_dssp GGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC---------CSSCSC
T ss_pred CCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC---------cccccC
Confidence 5678888865567789999999999 999999999998766666679999999999999999994 235799
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCC-----eeEEEec-cCC-CceeEEEeccCCCCCcccccCCCcCC
Q 006811 371 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPS-----YFMCADV-GQD-VYEEVDIITRGGNYGWRLYEGPYLFT 443 (630)
Q Consensus 371 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~-----~l~~~Dv-G~d-~~EEIn~I~~G~NYGWp~~eG~~~~~ 443 (630)
+||+||||++..++++||||+||||||||+||+.+++ .+|++|+ |++ ..||||+|++|+||||+
T Consensus 194 ~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~--------- 264 (463)
T 2wg3_C 194 SIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESE--------- 264 (463)
T ss_dssp BCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSC---------
T ss_pred cCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCC---------
Confidence 9999999999999999999999999999999999762 5788999 665 47999999999999993
Q ss_pred CCCCCCCCCCCCCCCCCCceeeccCCccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeE
Q 006811 444 PLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTT 523 (630)
Q Consensus 444 p~~~p~~~~~~~~~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~ 523 (630)
+|++.|+|+ .+ .||+||+||+|++||+|+|.||++|+. ++||.+.+++.+ +.|..
T Consensus 265 -----------------~P~~~~~~~-----~g-~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~-~~~~~ 319 (463)
T 2wg3_C 265 -----------------PSLLEFKPF-----SN-GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVT-KQWQE 319 (463)
T ss_dssp -----------------CCCEECCC----------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC------CCEE
T ss_pred -----------------CCeEEeeCC-----CC-ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCC-ceeeE
Confidence 488999874 23 899999999999999999999999996 899999876643 34543
Q ss_pred EEeeeecCCCCcccccccCCcCCCCCCccceEEEcCCCcEEEEeC---------CeEEEEecCCCC
Q 006811 524 SKIPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---------DGVYRVVRPSRC 580 (630)
Q Consensus 524 ~~i~f~c~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---------~gIyRiv~ps~~ 580 (630)
..+. .+.. ..|. ...++||++|++|+||+|||+++ ++||||++|+++
T Consensus 320 ~~~~---~g~~-~~~~------~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~ 375 (463)
T 2wg3_C 320 KPLC---LGTS-GSCR------GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP 375 (463)
T ss_dssp EEEC---EEET-TSSC------SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC
T ss_pred EEee---cCCc-cccc------ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc
Confidence 3321 1111 1111 12468999999999999999995 359999998875
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 630 | ||||
| d1crua_ | 450 | b.68.2.1 (A:) Soluble quinoprotein glucose dehydro | 2e-19 |
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 450 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 88.9 bits (219), Expect = 2e-19
Identities = 76/365 (20%), Positives = 123/365 (33%), Gaps = 51/365 (13%)
Query: 153 MVAHPDGSNRAFFSNQE-GKIWLATIPEQGLGETMELDASSPFADLTDEVHF-DTEFGLM 210
++ PD + + + + GKI PE G + + + V+ D + GL+
Sbjct: 32 LLWGPDN--QIWLTERATGKILRVN-PESG--------SVKTVFQVPEIVNDADGQNGLL 80
Query: 211 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVV 270
G AFHP+F N + S K P + N QT++
Sbjct: 81 GFAFHPDFKNNPYIYISGTF---KNPKSTDKELPN---------------------QTII 116
Query: 271 AEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGT 330
YT N + + + S H G+L+ GP D +Y+ +GD G
Sbjct: 117 RRYTYNKST--------DTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRN 167
Query: 331 ADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWA 390
Y F N+ L+ + L L SIPKDNP +G+ I+
Sbjct: 168 QLAYLFLPNQAQHTPTQQELN-GKDYHTYMGKVLRLNLDGSIPKDNPS--FNGVVSHIYT 224
Query: 391 LGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGG 450
LG RNP +F + + ++ G + +E+++I +GGNYGW G +
Sbjct: 225 LGHRNPQGLAFTPNG--KLLQSEQGPNSDDEINLIVKGGNYGWPNVAGYKDDSGYAYANY 282
Query: 451 ITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWA 510
N G + + TG F + +
Sbjct: 283 SAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMT 342
Query: 511 ASESP 515
P
Sbjct: 343 YICWP 347
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 630 | |||
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 100.0 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.97 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.97 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.29 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.19 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 98.05 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.95 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.79 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.77 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.43 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.33 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.32 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.15 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.13 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.02 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.92 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 96.76 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.42 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 96.32 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 94.39 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 93.05 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 92.08 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 92.07 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 91.89 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 90.63 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 90.52 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 90.16 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 86.91 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 85.55 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 81.41 |
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=1.3e-57 Score=496.19 Aligned_cols=354 Identities=24% Similarity=0.385 Sum_probs=256.8
Q ss_pred CCCcEEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccce-eeCCCCceeee
Q 006811 137 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEV-HFDTEFGLMGM 212 (630)
Q Consensus 137 p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V-~~~~e~GLLGi 212 (630)
.++|++|+|++||. |.|+|+||| ||||+|| .|+|++++ ++++..+. +.++...+ ...+|+|||||
T Consensus 14 ~~~f~~~~ia~~L~~P~~la~~pdg--~llVter~~G~i~~v~-~~~g~~~~--------i~~~~~~~~~~~ge~GLLgi 82 (450)
T d1crua_ 14 SENFDKKVILSNLNKPHALLWGPDN--QIWLTERATGKILRVN-PESGSVKT--------VFQVPEIVNDADGQNGLLGF 82 (450)
T ss_dssp CTTSCEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCEEE--------EEECTTCCCCTTSSCSEEEE
T ss_pred cCCcEEEEEECCCCCceEEEEeCCC--eEEEEEecCCEEEEEE-CCCCcEee--------cccCCccccccCCCCceeeE
Confidence 35899999999998 999999999 8999998 69999986 44443222 22332222 35789999999
Q ss_pred eeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCC
Q 006811 213 AFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSE 292 (630)
Q Consensus 213 AfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~ 292 (630)
||||+|++|++||++|+....+.. .. ......+|+|++.+.... ....
T Consensus 83 a~~Pdf~~n~~iYvsyt~~~~~~~---~~---------------------~~~~~~~v~~~~~~~~~~--------~~~~ 130 (450)
T d1crua_ 83 AFHPDFKNNPYIYISGTFKNPKST---DK---------------------ELPNQTIIRRYTYNKSTD--------TLEK 130 (450)
T ss_dssp EECTTTTTSCEEEEEEEEECTTC-----C---------------------CSCEEEEEEEEEEETTTT--------EEEE
T ss_pred EeCCCCccCCEEEEEEecCCCCCc---cc---------------------ccccceEEEeeecccccc--------cccc
Confidence 999999999999999997643311 00 001246788888765421 1223
Q ss_pred cEEEEEeccC-CCCccceeeEEcCCCCeEEEEeCCCCCCCCcc---------------cccccCCCCCeeEEEEecCCCC
Q 006811 293 VRRIFTMGLS-FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPY---------------NFSQNKKSLLGKITRLDVDNIP 356 (630)
Q Consensus 293 ~~~Il~~~~P-~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~---------------~~aQn~~sl~GKILRIdvDg~p 356 (630)
.++|+. .+| ...|+||+|+|+| ||+|||++||.++...+. ..+|++.++.||||||++|+
T Consensus 131 ~~~i~~-~~p~~~~H~gg~l~fgp-DG~LYvs~Gd~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~Gkilri~~dg-- 206 (450)
T d1crua_ 131 PVDLLA-GLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDG-- 206 (450)
T ss_dssp EEEEEE-EECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTS--
T ss_pred eEEEee-cccccccccccceeEcC-CCCEEEEecCCCcccccccccccccccCcccccccccccccccCceEEeeccc--
Confidence 445554 454 4679999999999 999999999988653221 24699999999999999998
Q ss_pred chhhhhhcccCCCccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccc
Q 006811 357 SAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLY 436 (630)
Q Consensus 357 ~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~ 436 (630)
++|+||||++ +.++||||+||||||||+||+ +| +||++|||++.+||||+|++|+|||||++
T Consensus 207 --------------~~~~dnP~~~--~~~~ei~a~G~RNp~g~~~~p-~g-~l~~~e~G~~~~dEln~i~~G~nYGWP~~ 268 (450)
T d1crua_ 207 --------------SIPKDNPSFN--GVVSHIYTLGHRNPQGLAFTP-NG-KLLQSEQGPNSDDEINLIVKGGNYGWPNV 268 (450)
T ss_dssp --------------CCCTTCCEET--TEECSEEEBCCSEEEEEEECT-TS-CEEEEEECSSSCEEEEECCTTCBCCTTTC
T ss_pred --------------cccccccccc--cccceEEEeccccccceeecc-cc-eeeeccccccccccccccccccccCCcee
Confidence 7999999985 467899999999999999999 56 59999999999999999999999999999
Q ss_pred cCCCcCCCCC-----------CCCCCCC---------------CCCCCCCCceeecc----CCccC---------CCCCC
Q 006811 437 EGPYLFTPLE-----------TPGGITP---------------LNSVSPIFPVLGYN----HSEVN---------KKEGS 477 (630)
Q Consensus 437 eG~~~~~p~~-----------~p~~~~~---------------~~~~~~i~Pi~~y~----H~~~~---------~~~gs 477 (630)
||...+++.. .+..... -.+..+.+|+.... |...+ .-.++
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ps 348 (450)
T d1crua_ 269 AGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWPT 348 (450)
T ss_dssp SSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGSSC
T ss_pred cCCcCCCCcccCCcccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccCCCceeeccc
Confidence 9976543210 0000000 00011223322210 00000 01356
Q ss_pred ccccceeeecCCC--CCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCCCccceE
Q 006811 478 ASITGGYFYRSMT--DPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIYSF 555 (630)
Q Consensus 478 ~S~tGg~vYrG~~--fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~gri~sf 555 (630)
.|++|+.||+|.+ ||+|+|.+|+++|..++|+.+..+++... .....+.+ ....+||+++
T Consensus 349 iapsg~~fY~g~~~~fp~~~g~lfvg~l~~~~i~~v~~~~~~~~-~~~~~~~~-----------------~~~~~R~rdv 410 (450)
T d1crua_ 349 VAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYST-TYDDAVPM-----------------FKSNNRYRDV 410 (450)
T ss_dssp CCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSSS-EEEEEEEE-----------------SCCSSCEEEE
T ss_pred ccCccceEecCCcccCcccCCCEEEEECcCCEEEEEEEcCCCce-eeEEEEec-----------------cCCCCCceEE
Confidence 7999999999974 99999999999999999999988765432 22222211 1236899999
Q ss_pred EEcCCCc-EEEEeC--CeEEE
Q 006811 556 GEDNRKD-IFILTS--DGVYR 573 (630)
Q Consensus 556 ~ed~dGe-LYvlts--~gIyR 573 (630)
+++|||+ |||+++ |.|||
T Consensus 411 ~~gpDGs~lyv~~d~~G~i~r 431 (450)
T d1crua_ 411 IASPDGNVLYVLTDTAGNVQK 431 (450)
T ss_dssp EECTTSSCEEEEECSSCCEEC
T ss_pred EECCCCCEEEEEECCCCCEec
Confidence 9999998 789887 35887
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|