Citrus Sinensis ID: 006835

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------63
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
cHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcHHcccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEEEEEEcccccccccEEEEEEEcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEEc
cHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcEcEcccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccHcHHHHHHHHHHHHHHHHHHHccccccccEcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEcccccHHHHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccEEEEEEEEEEcccccccccEEEEEEcccccEccccccccccccccHHHccccccEEEEEEEEcccccEEEEEEEEcc
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEaqrsgylphnqrvtwransglndgkasgvdlvggyydagdnvkfglPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTdyfikahpqpnvlygevgdgntdhncwqrpedmttdrraykidpsnpgsdlaGETAAAMAAASIVfrhsdpayssELLRHAYQLFdfadkyrgkydgSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYlgkngdsmggtgwgmtefgwdvkypgVQTLVAKFLMqgkaghyapvFERYQQKAEYFMCsclgkgsrnvqktpgglifRQRWNNMQFVTSASFLATVYSDYLASAGrdlkcsagnvapaELLGFAKSQVDyilgdnpratsymvgygnnypqrvhHRASSIVsikvnpsfvscrggyatwfsskgsdpnllvgavvggpdaydnfgdrrdnyeqtepatynnapILGILARLnaghggynqllpvivpaatpvvtkpspapkpktipptkpkttpapasssgaIAIQQKLTTswisngkryyrySTIVTNKSAKTLKNLKLSISKlygplwgltnlgnaygfpswlnnlaagkSLEFVYIHTANAADVSVSAYTLA
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATpvvtkpspapkpktipptkpkttpapasssgaIAIQQKlttswisngkryYRYSTivtnksaktlKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
MEKFMTplllllclplalaGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETaaamaaaSIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLpvivpaatpvvtkpspapkpktipptkpkttpapasssgaiaiQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
***FMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCW*******************************MAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPV******************************IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVS*****
**KFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQ********************************T*APASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVT**************************GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIV********************************SSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKFMTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query629 2.2.26 [Sep-21-2011]
Q42059620 Endoglucanase 6 OS=Arabid yes no 0.980 0.995 0.767 0.0
Q8L7I0626 Endoglucanase 19 OS=Arabi no no 0.961 0.966 0.761 0.0
Q5NAT0640 Endoglucanase 2 OS=Oryza yes no 0.942 0.926 0.631 0.0
Q6L4I2629 Endoglucanase 15 OS=Oryza no no 0.950 0.950 0.628 0.0
Q5NAT8640 Endoglucanase 1 OS=Oryza no no 0.931 0.915 0.610 0.0
O48766525 Endoglucanase 11 OS=Arabi no no 0.758 0.908 0.606 1e-177
Q9M995627 Endoglucanase 5 OS=Arabid no no 0.945 0.948 0.518 1e-170
A2XYW8625 Endoglucanase 13 OS=Oryza N/A no 0.926 0.932 0.491 1e-170
Q0J930625 Endoglucanase 13 OS=Oryza no no 0.926 0.932 0.489 1e-169
Q6Z5P2531 Endoglucanase 7 OS=Oryza no no 0.740 0.877 0.613 1e-169
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function desciption
 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/632 (76%), Positives = 554/632 (87%), Gaps = 15/632 (2%)

Query: 1   MEKFM---TPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLN 57
           MEKF      LLLLLC P+A +GHDYGQALSKS+LFFEAQRSG LP NQRVTWR++SGL 
Sbjct: 1   MEKFAPVAALLLLLLCFPVAFSGHDYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLT 60

Query: 58  DGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWG 117
           DGK+SGV+LVGGYYDAGDNVKFGLPMAFTVTMM+WS+IEYG Q+ A+GELG++++AIKWG
Sbjct: 61  DGKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWG 120

Query: 118 TDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAM 177
           TDYFIKAHP+PNVLYGEVGDGNTDH CWQRPE+MTTDR+AY+IDPSNPGSDLAGETAAAM
Sbjct: 121 TDYFIKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAM 180

Query: 178 AAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWA 237
           AAASIVFR S+P YS  LL HAYQLFDFADKYRGKYD SITVAQKYYRS+SGYNDELLWA
Sbjct: 181 AAASIVFRRSNPVYSRLLLTHAYQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWA 240

Query: 238 AAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYA 297
           AAWLYQAS NQ YLDYLG+NGD+MGGTGW MTEFGWDVKY GVQTLVAKFLMQGKAG +A
Sbjct: 241 AAWLYQASNNQFYLDYLGRNGDAMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHA 300

Query: 298 PVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLAS 357
           PVF +YQ+KA+ FMCS LGK SRN+QKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL S
Sbjct: 301 PVFRKYQEKADSFMCSLLGKSSRNIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTS 360

Query: 358 AGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSI 417
           +  +L+C+AGNVAP++LL FAKSQVDYILGDNPRATSYMVGYGNN+PQRVHHR SSIVS+
Sbjct: 361 SRSNLRCAAGNVAPSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSV 420

Query: 418 KVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAP 477
           KV+ +FV+CRGGYATWFS KGSDPNLL GA+VGGPDAYDNF DRRDNYEQTEPATYNNAP
Sbjct: 421 KVDRTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAP 480

Query: 478 ILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAI 537
           +LG+LARL++GH GY+Q LPV VPA  PVV +P P  +PK   P +         +SG +
Sbjct: 481 LLGVLARLSSGHSGYSQFLPV-VPA--PVVRRPMPIRRPKVTTPVR---------ASGPV 528

Query: 538 AIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPS 597
           AI QK+T+SW+S G+ YYRYST V NKS++ LK+L LSI  LYGP+WGL+  GN++G PS
Sbjct: 529 AIVQKITSSWVSKGRTYYRYSTTVINKSSRPLKSLNLSIKNLYGPIWGLSRSGNSFGLPS 588

Query: 598 WLNNLAAGKSLEFVYIHTANAADVSVSAYTLA 629
           W+++L +GKSLEFVYIH+   A+V+VS+YTLA
Sbjct: 589 WMHSLPSGKSLEFVYIHSTTPANVAVSSYTLA 620

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT0|GUN2_ORYSJ Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1 Back     alignment and function description
>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1 Back     alignment and function description
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function description
>sp|Q9M995|GUN5_ARATH Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1 Back     alignment and function description
>sp|A2XYW8|GUN13_ORYSI Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2 Back     alignment and function description
>sp|Q0J930|GUN13_ORYSJ Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1 Back     alignment and function description
>sp|Q6Z5P2|GUN7_ORYSJ Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query629
224058299622 predicted protein [Populus trichocarpa] 0.980 0.991 0.834 0.0
356523525625 PREDICTED: endoglucanase 6-like [Glycine 0.968 0.974 0.846 0.0
429326602622 korrigan [Populus tomentosa] 0.979 0.990 0.816 0.0
90017357620 endo-beta-1,4-glucanase [Prunus persica] 0.947 0.961 0.849 0.0
90017355620 endo-beta-1,4-glucanase [Prunus persica] 0.947 0.961 0.847 0.0
224072192622 glycosyl hydrolase family 9 [Populus tri 0.950 0.961 0.831 0.0
429326600614 korrigan [Populus tomentosa] 0.968 0.991 0.810 0.0
356513287624 PREDICTED: endoglucanase 6 [Glycine max] 0.987 0.995 0.846 0.0
225426356629 PREDICTED: endoglucanase 6 [Vitis vinife 0.987 0.987 0.791 0.0
449464062619 PREDICTED: endoglucanase 6-like [Cucumis 0.969 0.985 0.794 0.0
>gi|224058299|ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|222846736|gb|EEE84283.1| predicted protein [Populus trichocarpa] gi|347466587|gb|AEO97206.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466641|gb|AEO97233.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1100 bits (2846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/634 (83%), Positives = 576/634 (90%), Gaps = 17/634 (2%)

Query: 1   MEKF-----MTPLLLLLCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSG 55
           MEKF     M P  LLLCLP ALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWR+NSG
Sbjct: 1   MEKFVRLISMAPFFLLLCLPFALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRSNSG 60

Query: 56  LNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIK 115
           LNDGKASGVDLVGGYYDAGDNVKFGLPMAFT+TMMSWSIIEYGKQ+ +SGELGHAMNA+K
Sbjct: 61  LNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQLGSSGELGHAMNAVK 120

Query: 116 WGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAA 175
           WGTDY IKAHPQP+VLYGEVGDGNTDH+CWQRPEDMTTDRRAYKIDPSNPGSDLAGETAA
Sbjct: 121 WGTDYLIKAHPQPDVLYGEVGDGNTDHHCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAA 180

Query: 176 AMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELL 235
           AMAAASIVFR S+P+Y++ELL HA QLFDFAD+YRGKYD SITVAQKYYRS+SGYNDELL
Sbjct: 181 AMAAASIVFRRSNPSYANELLTHARQLFDFADRYRGKYDSSITVAQKYYRSVSGYNDELL 240

Query: 236 WAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGH 295
           WAAAW+YQA+ NQ+YL+YLG NGDSMGGTGWGMTEFGWDVKY GVQTLVAKFLMQGKAGH
Sbjct: 241 WAAAWMYQATNNQYYLNYLGNNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGH 300

Query: 296 YAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYL 355
           +APVFE+YQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL
Sbjct: 301 HAPVFEKYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYL 360

Query: 356 ASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIV 415
           ASAGR+L C+AGNVAP +LL FAKSQVDYILGDNPRATSYMVGYGNNYP++VHHR SSIV
Sbjct: 361 ASAGRNLNCAAGNVAPTQLLAFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIV 420

Query: 416 SIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNN 475
           S KV+P+FV+CRGGYATWFS KGSDPNLL GA+VGGPDAYDNF D RDNYEQTEPATYNN
Sbjct: 421 SYKVDPTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNN 480

Query: 476 APILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSG 535
           AP+LG+LARL+ GHGGYNQLLPV+VPA  P+  KP+P          + K TPAPAS+S 
Sbjct: 481 APLLGLLARLSGGHGGYNQLLPVVVPA--PIEKKPAP----------QTKITPAPASTSA 528

Query: 536 AIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGF 595
            +AI QK T +WI+ GK YYRYSTIVTNKSAK LK++KLSISKLYGPLWGLT  GN Y F
Sbjct: 529 PVAIVQKTTATWIAKGKTYYRYSTIVTNKSAKELKDIKLSISKLYGPLWGLTKSGNFYAF 588

Query: 596 PSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA 629
           PSW+ +LAAGKSLEFVY+H+A+AADVSVS+YTLA
Sbjct: 589 PSWITSLAAGKSLEFVYVHSASAADVSVSSYTLA 622

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356523525|ref|XP_003530388.1| PREDICTED: endoglucanase 6-like [Glycine max] Back     alignment and taxonomy information
>gi|429326602|gb|AFZ78641.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|90017357|emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|90017355|emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica] Back     alignment and taxonomy information
>gi|224072192|ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|347466589|gb|AEO97207.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326600|gb|AFZ78640.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|356513287|ref|XP_003525345.1| PREDICTED: endoglucanase 6 [Glycine max] Back     alignment and taxonomy information
>gi|225426356|ref|XP_002270880.1| PREDICTED: endoglucanase 6 [Vitis vinifera] gi|147821654|emb|CAN66000.1| hypothetical protein VITISV_031862 [Vitis vinifera] gi|297742327|emb|CBI34476.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449464062|ref|XP_004149748.1| PREDICTED: endoglucanase 6-like [Cucumis sativus] gi|449505061|ref|XP_004162365.1| PREDICTED: endoglucanase 6-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query629
TAIR|locus:2014205620 GH9C2 "glycosyl hydrolase 9C2" 0.758 0.769 0.825 1.5e-258
TAIR|locus:2136073626 GH9C3 "glycosyl hydrolase 9C3" 0.758 0.761 0.798 6.9e-250
TAIR|locus:2028441627 GH9C1 "glycosyl hydrolase 9C1" 0.748 0.751 0.565 1e-167
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.740 0.887 0.608 2.7e-164
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.723 0.928 0.543 2.2e-137
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.724 0.928 0.534 1.5e-136
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.728 0.930 0.533 3.2e-136
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.724 0.928 0.538 4.7e-135
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.723 0.908 0.526 1.2e-127
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.731 0.934 0.514 7.8e-126
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2195 (777.7 bits), Expect = 1.5e-258, Sum P(2) = 1.5e-258
 Identities = 394/477 (82%), Positives = 437/477 (91%)

Query:    20 GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKF 79
             GHDYGQALSKS+LFFEAQRSG LP NQRVTWR++SGL DGK+SGV+LVGGYYDAGDNVKF
Sbjct:    23 GHDYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLTDGKSSGVNLVGGYYDAGDNVKF 82

Query:    80 GLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGN 139
             GLPMAFTVTMM+WS+IEYG Q+ A+GELG++++AIKWGTDYFIKAHP+PNVLYGEVGDGN
Sbjct:    83 GLPMAFTVTMMAWSVIEYGNQLQANGELGNSIDAIKWGTDYFIKAHPEPNVLYGEVGDGN 142

Query:   140 TDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHA 199
             TDH CWQRPE+MTTDR+AY+IDPSNPGSDLAGET       SIVFR S+P YS  LL HA
Sbjct:   143 TDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPVYSRLLLTHA 202

Query:   200 YQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD 259
             YQLFDFADKYRGKYD SITVAQKYYRS+SGYNDELLWAAAWLYQAS NQ YLDYLG+NGD
Sbjct:   203 YQLFDFADKYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWLYQASNNQFYLDYLGRNGD 262

Query:   260 SMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGS 319
             +MGGTGW MTEFGWDVKY GVQTLVAKFLMQGKAG +APVF +YQ+KA+ FMCS LGK S
Sbjct:   263 AMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHAPVFRKYQEKADSFMCSLLGKSS 322

Query:   320 RNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAK 379
             RN+QKTPGGLIFRQRWNNMQFVTSASFL TVYSDYL S+  +L+C+AGNVAP++LL FAK
Sbjct:   323 RNIQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTSSRSNLRCAAGNVAPSQLLSFAK 382

Query:   380 SQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGS 439
             SQVDYILGDNPRATSYMVGYGNN+PQRVHHR SSIVS+KV+ +FV+CRGGYATWFS KGS
Sbjct:   383 SQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSVKVDRTFVTCRGGYATWFSRKGS 442

Query:   440 DPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLL 496
             DPNLL GA+VGGPDAYDNF DRRDNYEQTEPATYNNAP+LG+LARL++GH GY+Q L
Sbjct:   443 DPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAPLLGVLARLSSGHSGYSQFL 499
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42059GUN6_ARATH3, ., 2, ., 1, ., 40.76740.98090.9951yesno
Q5NAT0GUN2_ORYSJ3, ., 2, ., 1, ., 40.63140.94270.9265yesno
Q8L7I0GUN19_ARATH3, ., 2, ., 1, ., 40.76140.96180.9664nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_I000818
hydrolase, hydrolyzing O-glycosyl compounds (EC-3.2.1.4) (622 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query629
PLN02171629 PLN02171, PLN02171, endoglucanase 0.0
PLN02340614 PLN02340, PLN02340, endoglucanase 0.0
PLN02420525 PLN02420, PLN02420, endoglucanase 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
PLN03009495 PLN03009, PLN03009, cellulase 1e-177
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-172
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-148
pfam0947880 pfam09478, CBM49, Carbohydrate binding domain CBM4 1e-32
smart0106384 smart01063, CBM49, Carbohydrate binding domain CBM 2e-19
PRK06549130 PRK06549, PRK06549, acetyl-CoA carboxylase biotin 0.002
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information 
 Score = 1189 bits (3079), Expect = 0.0
 Identities = 504/637 (79%), Positives = 549/637 (86%), Gaps = 16/637 (2%)

Query: 1   MEKFMT-----PLLLL---LCLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRA 52
           MEKF        LLL    LC P+A  GHDYGQALSKSILFFEAQRSG LP NQRVTWRA
Sbjct: 1   MEKFARVILLALLLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRA 60

Query: 53  NSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMN 112
           NSGL DGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAA+GELGHAM+
Sbjct: 61  NSGLFDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAAAGELGHAMD 120

Query: 113 AIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGE 172
           A+KWGTDYFIKAHP+PNVLYGEVGDG+TDH CWQRPEDMTTDR+AY+IDP NPGSDLAGE
Sbjct: 121 AVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMTTDRQAYRIDPQNPGSDLAGE 180

Query: 173 TAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYND 232
           TAAAMAAASIVFR S+P Y++ELL HA QLFDFADKYRGKYD SITVAQKYYRS+SGY D
Sbjct: 181 TAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGD 240

Query: 233 ELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGK 292
           ELLWAAAWLYQA+ NQ+YLDYLG NGD++GGTGW MTEFGWDVKY GVQ LVAKFLMQGK
Sbjct: 241 ELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGK 300

Query: 293 AGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYS 352
           AG +A VF+RYQQKAE+FMCSCLGKG+RNVQKTPGGLI+RQRWNNMQFVTSASFL TVYS
Sbjct: 301 AGEHAAVFQRYQQKAEFFMCSCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYS 360

Query: 353 DYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRAS 412
           DYLAS+GR L+C+AGN AP++LL FAKSQVDYILGDNPRATSYMVGYG NYP++VHHR S
Sbjct: 361 DYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRGS 420

Query: 413 SIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPAT 472
           SIVSIKV+PSFVSCRGGYATWFS KGSDPNLL GA+VGGPDAYDNF D RDNYEQTEPAT
Sbjct: 421 SIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPAT 480

Query: 473 YNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPAS 532
           YNNAP+LG+LARL  GHGGYNQLL V VPA + V    +PA       P +   TPAPAS
Sbjct: 481 YNNAPLLGVLARLAGGHGGYNQLLVV-VPAPSEVAINRTPA-------PQRRPPTPAPAS 532

Query: 533 SSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNA 592
           +S  I I+QK T SW + G+ YYRYST VTN+SAKTLK L L ISKLYGPLWGLT  G  
Sbjct: 533 TSSPIEIEQKATASWKAKGRTYYRYSTTVTNRSAKTLKELHLGISKLYGPLWGLTKAGYG 592

Query: 593 YGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA 629
           Y  PSW+ +L AGKSLEFVY+H+A+ ADV VS Y LA
Sbjct: 593 YVLPSWMPSLPAGKSLEFVYVHSASPADVWVSGYKLA 629

Length = 629
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|220256 pfam09478, CBM49, Carbohydrate binding domain CBM49 Back     alignment and domain information
>gnl|CDD|215005 smart01063, CBM49, Carbohydrate binding domain CBM49 Back     alignment and domain information
>gnl|CDD|235826 PRK06549, PRK06549, acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 629
PLN02171629 endoglucanase 100.0
PLN02340614 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
PF0947880 CBM49: Carbohydrate binding domain CBM49; InterPro 99.69
PF00553101 CBM_2: Cellulose binding domain; InterPro: IPR0019 99.51
smart0063792 CBD_II CBD_II domain. 99.08
COG5297544 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase 98.79
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.2
PF06483180 ChiC: Chitinase C; InterPro: IPR009470 This ~170 a 96.37
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.16
COG1331667 Highly conserved protein containing a thioredoxin 94.58
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.03
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 93.67
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 93.3
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 89.2
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 86.97
PF01299 306 Lamp: Lysosome-associated membrane glycoprotein (L 86.75
cd02892634 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; 82.83
TIGR03463634 osq_cycl 2,3-oxidosqualene cyclase. This model ide 82.23
COG3533589 Uncharacterized protein conserved in bacteria [Fun 81.9
>PLN02171 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=3.9e-148  Score=1238.42  Aligned_cols=621  Identities=81%  Similarity=1.332  Sum_probs=561.2

Q ss_pred             Ccchh-HHHHHHh-------hhhcccchhhHHHHHHHHHHHHHHhcCCCCCCCCCcCcCCCCCCCCCCCcccccccceee
Q 006835            1 MEKFM-TPLLLLL-------CLPLALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYD   72 (629)
Q Consensus         1 ~~~~~-~~~~~~~-------~~~~~~~~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~Wr~~s~l~d~~~~~~DlsGGW~D   72 (629)
                      |+|++ ++++++|       |++.+.+.++|.++|++||+||++||||.+|+.+++.||++|++.|+++.++||+|||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~~~~vDlsGGwyD   80 (629)
T PLN02171          1 MEKFARVILLALLLLAAAQLCFPVAFGGHDYGQALSKSILFFEAQRSGVLPPNQRVTWRANSGLFDGKASGVDLVGGYYD   80 (629)
T ss_pred             CchhHhHHHHHHHHHHHHhcccccccCchhHHHHHHHHHHHHHHccCCCCCcccCCCCccCCCCCCCCcCcccCCCCcee
Confidence            77777 4444443       334567889999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccccccchhHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCC
Q 006835           73 AGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMT  152 (629)
Q Consensus        73 AGD~~Ky~~~~a~s~~~L~~a~~ef~~~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~  152 (629)
                      ||||+||++|+|+++++|+|+++||++.+++.++++++|||||||+|||||||+++++||+||||+..||.+|++||+|+
T Consensus        81 AGD~vKf~~p~a~s~t~L~w~~~e~~~~~~~~g~~~~~Ldeikw~~Dyllk~~~~~~~~y~qVgdg~~DH~~W~~Pe~~~  160 (629)
T PLN02171         81 AGDNVKFGLPMAFTVTMMSWSIIEYGKQMAAAGELGHAMDAVKWGTDYFIKAHPEPNVLYGEVGDGDTDHYCWQRPEDMT  160 (629)
T ss_pred             CCCCceeccchHHHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCccccCcCChhHcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCccc
Q 006835          153 TDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYND  232 (629)
Q Consensus       153 ~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~D  232 (629)
                      ++|++|+|++++|||++++++|||||+||||||++||+||++||+|||++|+||+++|+.|+++++...++|+|.++|.|
T Consensus       161 ~~R~~y~i~~~~pgSd~a~e~AAAlAaaS~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~~~~~~~~~Y~s~s~y~D  240 (629)
T PLN02171        161 TDRQAYRIDPQNPGSDLAGETAAAMAAASIVFRRSNPGYANELLTHAKQLFDFADKYRGKYDSSITVAQKYYRSVSGYGD  240 (629)
T ss_pred             ccceeEEecCCCCchHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhCCCcccCCCcccCCccCCCCCccH
Confidence            99999999999999999999999999999999999999999999999999999999999998888888899998778999


Q ss_pred             HHHHHHHHHHHHhCChhHHHHHhhcCcCCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHH
Q 006835          233 ELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMC  312 (629)
Q Consensus       233 e~~wAAaeLy~aTG~~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~  312 (629)
                      ||+|||+|||+||||++|+++++.+.+.++...|...+|+||++..|+++|++++++.++.+.+...+++|++.+|.|+|
T Consensus       241 El~WAAawLy~ATgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~~~  320 (629)
T PLN02171        241 ELLWAAAWLYQATNNQYYLDYLGNNGDALGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMC  320 (629)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHH
Confidence            99999999999999999999998877666666777778999999999999999887655555567788999999999999


Q ss_pred             HhhcCCCCccccCCCCceecccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCC
Q 006835          313 SCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRA  392 (629)
Q Consensus       313 ~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~  392 (629)
                      .++++...++.+||+||+|...|||+||++|++||+++|+|++...+..|+|..+....++|++||++|||||||+||++
T Consensus       321 ~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np~~  400 (629)
T PLN02171        321 SCLGKGARNVQKTPGGLIYRQRWNNMQFVTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRA  400 (629)
T ss_pred             hhccCCCceeeecCCeeEEECCCChHHHHHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCCCC
Confidence            98877656789999999999999999999999999999999997766779999888889999999999999999999999


Q ss_pred             cceEEeeCCCCCCCccccccccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccc
Q 006835          393 TSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPAT  472 (629)
Q Consensus       393 ~SyV~G~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaI  472 (629)
                      +|||||||+|+|++||||.|+++.++.+|..+.|.+||++|++.+.+|||+|+||||||||.+|+|.|+|.+|++|||||
T Consensus       401 ~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~C~~g~~~~~~~~~~np~vl~GAlVGGPd~~D~y~D~r~~y~~nEva~  480 (629)
T PLN02171        401 TSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPAT  480 (629)
T ss_pred             CceEeecCCCCCCCcccccccCCccccCccccCCCCccchhccCCCCCCCcccCceecCCCcCCCCCccccccccCceeE
Confidence            99999999999999999999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             cCchHHHHHHHHHhccCCCcccccccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEecccCCCCe
Q 006835          473 YNNAPILGILARLNAGHGGYNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGK  552 (629)
Q Consensus       473 d~NA~lv~~la~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~v~~sW~~g~~  552 (629)
                      |||||||++||+|...+||+.++++. .++|.++.+.      .++.|..++ .+|.|......++|+|+++++|..+|+
T Consensus       481 d~NA~~vg~lA~l~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~ei~i~q~v~~sW~~~g~  552 (629)
T PLN02171        481 YNNAPLLGVLARLAGGHGGYNQLLVV-VPAPSEVAIN------RTPAPQRRP-PTPAPASTSSPIEIEQKATASWKAKGR  552 (629)
T ss_pred             ecchHHHHHHHHHHhhcCCccccccc-cCCccccccc------cCCCCCCCc-ccCCCccCcceeEEEEEEEEEEEcCCc
Confidence            99999999999999999999887722 2222222221      111111111 112222222489999999999999999


Q ss_pred             eEEEEEEEEEeCCCCcccceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEEEEEEecCCCCceeEEEEEeC
Q 006835          553 RYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA  629 (629)
Q Consensus       553 ~~~q~~vtV~N~g~~~i~~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~FGfi~~~~~a~~~v~~~~~~  629 (629)
                      +|+|++|+|+|++..+|++..|.+++...+||++...++.+++|+|..+|++|++++||||..+.|+++.|+++.|+
T Consensus       553 ~y~qy~v~I~N~s~~~ik~i~i~~~~~~~~iW~v~~~~ngytlPs~~~sL~aG~s~tFgyI~~~~pA~~~v~~y~~~  629 (629)
T PLN02171        553 TYYRYSTTVTNRSAKTLKELHLGISKLYGPLWGLTKAGYGYVLPSWMPSLPAGKSLEFVYVHSASPADVWVSGYKLA  629 (629)
T ss_pred             eEEEEEEEEEECCCCceeeeeeeeccccccchheeecCCcccCchhhcccCCCCeeEEEeecCCCCceEEEEEEEeC
Confidence            99999999999999999999999888888999999888889999999999999999999999877999999999874

>PLN02340 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity Back     alignment and domain information
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3 Back     alignment and domain information
>smart00637 CBD_II CBD_II domain Back     alignment and domain information
>COG5297 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase A) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF06483 ChiC: Chitinase C; InterPro: IPR009470 This ~170 aa region is found at the C-terminal to the catalytic domain (IPR001223 from INTERPRO) found in members of glycoside hydrolase family 18 Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear Back     alignment and domain information
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold Back     alignment and domain information
>TIGR03463 osq_cycl 2,3-oxidosqualene cyclase Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query629
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 1e-98
1js4_A605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 2e-87
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-84
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 2e-73
1ga2_A614 The Crystal Structure Of Endoglucanase 9g From Clos 1e-72
1k72_A614 The X-ray Crystal Structure Of Cel9g Complexed With 1e-72
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 3e-63
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 7e-53
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 4e-06
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  357 bits (915), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 205/469 (43%), Positives = 271/469 (57%), Gaps = 43/469 (9%)
Query: 21  HDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFG 80
           +DY Q L  S+LF+EAQRSG LP +Q+VTWR +S LND    G DL GGY+DAGD VKFG
Sbjct: 3   YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFG 62
Query: 81  LPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNT 140
            PMA+T T+++W +I++    +++G L     A+KW TDYFIKAH   N  YG+VG G+ 
Sbjct: 63  FPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDA 122
Query: 141 DHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETXXXXXXXSIVFRHSDPAYSSELLRHAY 200
           DH  W RPEDMT  R AYKID S PGSDLAGET       SIVFR+ D  YS+ LL HA 
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182
Query: 201 QLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDS 260
           QLFDFA+ YRGKY  SIT A+ +Y S + Y DEL+WAAAWLY+A+ +  YL+      D 
Sbjct: 183 QLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYDE 241
Query: 261 MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSR 320
            G   WG     WD K  GVQ L+AK   +          + Y+   + ++   +     
Sbjct: 242 FGLQNWG-GGLNWDSKVSGVQVLLAKLTNK----------QAYKDTVQSYVNYLI----N 286
Query: 321 NVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKS 380
           N QKTP GL++   W  ++   +A+F+              L+ +   ++ +    FA++
Sbjct: 287 NQQKTPKGLLYIDMWGTLRHAANAAFIM-------------LEAAELGLSASSYRQFAQT 333
Query: 381 QVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSD 440
           Q+DY LGD  R  S++ G+G+N P R HHR+SS       P+  +C      W +    D
Sbjct: 334 QIDYALGDGGR--SFVCGFGSNPPTRPHHRSSSCP-----PAPATC-----DWNTFNSPD 381
Query: 441 PN--LLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNA 487
           PN  +L GA+VGGPD  DN+ D R +Y   E AT  NA     LA L A
Sbjct: 382 PNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query629
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 0.0
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 0.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 0.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-180
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-180
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-175
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-158
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-150
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-141
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 8e-85
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
 Score =  545 bits (1406), Expect = 0.0
 Identities = 188/582 (32%), Positives = 270/582 (46%), Gaps = 64/582 (10%)

Query: 19  AGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVK 78
             ++YG+AL KSI+F+E QRSG LP ++R  WR +SG+ DG   GVDL GG+YDAGD+VK
Sbjct: 2   GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVK 61

Query: 79  FGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDG 138
           F LPM++T  M++WS+ E       SG+  + M+ IKW  DYFIK +P P V Y +VGDG
Sbjct: 62  FNLPMSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDG 121

Query: 139 NTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRH 198
             DH+ W   E M  +R ++K+D S PGS +   TAA++A+A++VF+ SDP Y+ + + H
Sbjct: 122 GKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISH 181

Query: 199 AYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNG 258
           A  LFD ADK +       T A  YY S S + D+L WAA WLY A+ +  YLD      
Sbjct: 182 AKNLFDMADKAKSDA--GYTAASGYYSS-SSFYDDLSWAAVWLYLATNDSTYLDKAESYV 238

Query: 259 DSMGGTGWGMT-----EFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCS 313
            + G               WD  + G + L+AK              + Y+   E  +  
Sbjct: 239 PNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAK----------LTNKQLYKDSIEMNLDF 288

Query: 314 CL-GKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPA 372
              G     V  TP GL +  +W +++  T+ +FLA VY+++                 +
Sbjct: 289 WTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFLAGVYAEWEGCTPSK---------VS 339

Query: 373 ELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYAT 432
               F KSQ+DY LG   R  S++VGYG N PQ  HHR +               G +  
Sbjct: 340 VYKDFLKSQIDYALGSTGR--SFVVGYGVNPPQHPHHRTAH--------------GSWTD 383

Query: 433 WFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGY 492
             +S     + + GA+VGGPD  D + D  +NY   E A   NA   G LA++    GG 
Sbjct: 384 QMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGG- 442

Query: 493 NQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSW--ISN 550
                         +       K             +   +   I       T W     
Sbjct: 443 ------------DPIPNFKAIEKITNDEVIIKAGLNSTGPNYTEIKAVVYNQTGWPARVT 490

Query: 551 GKRYYRYSTIVTNKSAKTLKNLKLSISKLY-----GPLWGLT 587
            K  ++Y   ++   A  +  L L  S  Y       + G+ 
Sbjct: 491 DKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVL 532
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query629
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 99.69
3ndz_E107 Endoglucanase D; cellotriose, xylanase, carbohydra 99.64
1exg_A110 EXO-1,4-beta-D-glycanase; cellulose binding domain 99.58
2cwr_A103 Chitinase; chitin-binding domain, endoglucanase, h 99.41
1e5b_A87 Xylanase D; hydrolase, xylan binding domain, beta- 98.68
1heh_C88 Endo-1,4-beta-xylanase D; hydrolase(xylan degradat 98.55
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.3
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.16
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.85
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.77
3ghp_A227 Cellulosomal scaffoldin adaptor protein B; linker 95.38
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.29
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 93.28
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 91.22
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 89.74
3k11_A445 Putative glycosyl hydrolase; structural genomics, 89.53
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 89.17
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 86.88
1nc5_A373 Hypothetical protein YTER; structural genomics, he 85.05
1nc5_A373 Hypothetical protein YTER; structural genomics, he 84.97
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 81.45
3k11_A445 Putative glycosyl hydrolase; structural genomics, 81.29
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-114  Score=977.11  Aligned_cols=489  Identities=42%  Similarity=0.741  Sum_probs=424.7

Q ss_pred             chhhHHHHHHHHHHHHHHhcCCCCCCCCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHHHHH
Q 006835           19 AGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYG   98 (629)
Q Consensus        19 ~~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~   98 (629)
                      ..++|.++|++||+||++||||.+|+.+|+.||+++|+.||++.++||+|||||||||+||++|+|+++++|+|+++||+
T Consensus         2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~   81 (605)
T 1tf4_A            2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP   81 (605)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred             CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence            45899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHH
Q 006835           99 KQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMA  178 (629)
Q Consensus        99 ~~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA  178 (629)
                      +.++++++++|||||||||+|||||||++++.||+||||+..||.+|++||+|+.+|++|.++.++|+|++++++|||||
T Consensus        82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlA  161 (605)
T 1tf4_A           82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (605)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             HHHhhcCCcccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcC
Q 006835          179 AASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNG  258 (629)
Q Consensus       179 ~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~  258 (629)
                      +||||||++||+||++||++||++|+||++||+.|.++.+ .+++|+|++++.|||+|||+|||+||||++|+++++++.
T Consensus       162 aAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~-~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~  240 (605)
T 1tf4_A          162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY  240 (605)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST-THHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred             HHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-ccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988777 889999888999999999999999999999999998876


Q ss_pred             cCCCCCCC----C-ccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhc-CCCCccccCCCCceec
Q 006835          259 DSMGGTGW----G-MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLG-KGSRNVQKTPGGLIFR  332 (629)
Q Consensus       259 ~~~~~~~~----~-~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~-~~~~~~~~tp~Gl~~~  332 (629)
                      ..++...+    . ...++||++..|+++||+++.  ++        +.|++.++.++|.++. ..+++++++|+|+.|.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~--------~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~  310 (605)
T 1tf4_A          241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--GK--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVL  310 (605)
T ss_dssp             GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--CC--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCC
T ss_pred             HhcccccccccccccccccccchHHHHHHHHHhcc--Ch--------HHHHHHHHHHHHHHhcccCCCccccCCCcceec
Confidence            54432111    1 136899999999999988753  21        3577778888876653 3567889999999999


Q ss_pred             ccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCcccccc
Q 006835          333 QRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRAS  412 (629)
Q Consensus       333 ~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s  412 (629)
                      +.||||||++|.+||+++|++++.+.          .++++|+++|++|||||||+||+++|||||||+|+|+|||||++
T Consensus       311 ~~WGs~~~~~n~a~l~~~~a~~~~~~----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~s  380 (605)
T 1tf4_A          311 DTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA  380 (605)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhcccc----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCccccc
Confidence            99999999999999999999976311          24578999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCC-CCCcCcCCCccccccccccCchHHHHHHHHHhccCCC
Q 006835          413 SIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG  491 (629)
Q Consensus       413 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~-~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~g  491 (629)
                      +|+              |...++.+.+|+++|+|+||||||. .|+|.|+|++|++|||||||||+||++||+|...+||
T Consensus       381 s~~--------------~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~  446 (605)
T 1tf4_A          381 HGS--------------WTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG  446 (605)
T ss_dssp             HTC--------------SSSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred             ccC--------------ccccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence            873              2223456778999999999999998 9999999999999999999999999999999999887


Q ss_pred             cccccccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEecccCCCCeeEEEEEEEEEeCCCC---c
Q 006835          492 YNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAK---T  568 (629)
Q Consensus       492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~---~  568 (629)
                        +      |.+.    .     +|+        +    .|....+-|+.++..    .+..+.+..+.|.|++..   .
T Consensus       447 --~------p~~~----~-----~~~--------~----~~~~~e~~vea~~~~----~~~~~~~~~~~i~N~s~~p~~~  493 (605)
T 1tf4_A          447 --T------PLAD----F-----PPT--------E----EPDGPEIFVEAQINT----PGTTFTEIKAMIRNQSGWPARM  493 (605)
T ss_dssp             --C------CCSS----C-----SCC--------C----CCSSCSEEEEEEEEE----CCSSEEEEEEEEEECCCTTCCC
T ss_pred             --C------cCCC----C-----CCC--------C----CCCCCceEEEEEecc----CCCCceeEEEEEEeCCCCCcee
Confidence              2      1111    0     000        0    111123555555432    133569999999997653   4


Q ss_pred             ccceEEE
Q 006835          569 LKNLKLS  575 (629)
Q Consensus       569 i~~w~i~  575 (629)
                      +++.+++
T Consensus       494 l~~l~~R  500 (605)
T 1tf4_A          494 LDKGTFR  500 (605)
T ss_dssp             BCSEEEE
T ss_pred             cCCceEE
Confidence            6788887
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E* Back     alignment and structure
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A Back     alignment and structure
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A Back     alignment and structure
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A Back     alignment and structure
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 629
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-176
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-168
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-166
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-157
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-126
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-116
d2afaa1411 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {S 1e-04
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  506 bits (1304), Expect = e-176
 Identities = 197/492 (40%), Positives = 267/492 (54%), Gaps = 44/492 (8%)

Query: 21  HDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFG 80
            +Y +AL KS+ F+EAQRSG LP N RV+WR +SGLNDG   G+DL GG+YDAGD+VKFG
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 81  LPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNT 140
            PMAFT TM++W  IE  +    SG++ +  + ++W  DYFIKAHP PNVLY +VGDG+ 
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 141 DHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAY 200
           DH  W   E M  +R ++K+DPS PGSD+A ETAAAMAA+SIVF   DPAY++ L++HA 
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 201 QLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDS 260
           QL+ FAD YRG Y   +     Y  S SGY DEL+W A WLY+A+G+  YL       D 
Sbjct: 184 QLYTFADTYRGVYSDCVPAGAFYN-SWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDF 242

Query: 261 MGGTGWG-----MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCL 315
           +                WD K  G   L+AK              ++Y   A  ++    
Sbjct: 243 LSTEQQTDLRSYRWTIAWDDKSYGTYVLLAK----------ETGKQKYIDDANRWLDYWT 292

Query: 316 -GKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAEL 374
            G   + V  +PGG+     W  +++  + +F+A VY+  +    R              
Sbjct: 293 VGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPVR----------KQRY 342

Query: 375 LGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWF 434
             FA  Q++Y LGDNPR +SY+VG+GNN P+  HHR +               G +    
Sbjct: 343 HDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH--------------GSWTDSI 388

Query: 435 SSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYN 493
           +S   + ++L GA+VGGP +  D + D R +Y   E AT  NA     LA L   +GG  
Sbjct: 389 ASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG-- 446

Query: 494 QLLPVIVPAATP 505
             L    P   P
Sbjct: 447 TPLADFPPTEEP 458
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Length = 411 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query629
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d1exha_110 Exo-1,4-beta-D-glycanase (cellulase, xylanase), ce 99.64
d1hehc_88 Endo-1,4-beta xylanase D, xylan binding domain, XB 98.77
d1e5ba_87 Endo-1,4-beta xylanase D, xylan binding domain, XB 98.71
d1qbaa2173 Bacterial chitobiase, n-terminal domain {Serratia 95.23
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.33
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 90.98
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 90.06
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 83.95
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=1.9e-107  Score=898.16  Aligned_cols=437  Identities=44%  Similarity=0.765  Sum_probs=383.8

Q ss_pred             hhhHHHHHHHHHHHHHHhcCCCCCCCCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHHHHHH
Q 006835           20 GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGK   99 (629)
Q Consensus        20 ~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~~   99 (629)
                      +++|.++|+++|+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++|++
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHH
Q 006835          100 QMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAA  179 (629)
Q Consensus       100 ~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~  179 (629)
                      .++++|++||||||+|||+|||||||+++|.||+||||+..||++|++|+.++.+|+.|.+...+|+|++++++|||||+
T Consensus        83 ~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA~  162 (460)
T d1tf4a1          83 GYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAA  162 (460)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999988888999999999999999


Q ss_pred             HhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcCc
Q 006835          180 ASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD  259 (629)
Q Consensus       180 As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~~  259 (629)
                      ||||||++||+||++||++||++|+||++||+.|.+..+....+| +++++.||++|||+|||++|||++|+++++....
T Consensus       163 as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~-~~~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~~  241 (460)
T d1tf4a1         163 SSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYN-SWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD  241 (460)
T ss_dssp             HHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHC-CSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGG
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCC-CccccchHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence            999999999999999999999999999999999877655444444 4588999999999999999999999999987543


Q ss_pred             CCCCC-----CCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcC-CCCccccCCCCceecc
Q 006835          260 SMGGT-----GWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQ  333 (629)
Q Consensus       260 ~~~~~-----~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~-~~~~~~~tp~Gl~~~~  333 (629)
                      .+...     ......++|+++..++++++++...  +        ..+++.++.+++..... ..+.++++++++.+.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (460)
T d1tf4a1         242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETG--K--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLD  311 (460)
T ss_dssp             GSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHC--C--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCC
T ss_pred             hcccccccccccccccccccchhHHHHHHHHHHhh--h--------hHHHHHHHHHHHHHhhhcccccCCcCCCcceecC
Confidence            22111     1112368999999888888776531  1        23344455555443332 4567788899999999


Q ss_pred             cCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCccccccc
Q 006835          334 RWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASS  413 (629)
Q Consensus       334 ~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s~  413 (629)
                      .|||+++++|.+|+++++++++.+          ..++.+|+++|++|||||||+||+++|||||||+|+|+|||||+++
T Consensus       312 ~WGsn~~~~n~a~~~~~a~~~~~~----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~  381 (460)
T d1tf4a1         312 TWGALRYAANTAFVALVYAKVIDD----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAH  381 (460)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHhcc----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCcccc
Confidence            999999999999999999886521          1245789999999999999999999999999999999999999998


Q ss_pred             cccccCCCCccccCCCccccccCCCCCCCcccceEecCCC-CCCCcCcCCCccccccccccCchHHHHHHHHHhccCCC
Q 006835          414 IVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPD-AYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG  491 (629)
Q Consensus       414 ~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn-~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~g  491 (629)
                      ++..              .+...+.||+++|+|+|||||| ..+||+|++++|++|||||||||+||++||+|++..||
T Consensus       382 ~~~~--------------~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~  446 (460)
T d1tf4a1         382 GSWT--------------DSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG  446 (460)
T ss_dssp             TCSS--------------SCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred             CCCc--------------cccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence            7431              2345678899999999999999 58999999999999999999999999999999999887
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1hehc_ b.2.2.1 (C:) Endo-1,4-beta xylanase D, xylan binding domain, XBD {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1e5ba_ b.2.2.1 (A:) Endo-1,4-beta xylanase D, xylan binding domain, XBD {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1qbaa2 b.2.2.3 (A:28-200) Bacterial chitobiase, n-terminal domain {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure