Citrus Sinensis ID: 006870

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------63
MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFEDPNLTATVSENLENLMKHKQITCA
cccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEcccccccccccHHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHcccccccccccEEEEEcccccEEEccHHHHHccccccccccccccccEEccccccccHHHHHHHHcHHHHHHccccccccccccccccccccccccccccccccEEEEEcccccccccccccccEEEEcccHHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEccccEEEEcccccccccccccccEEcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccHHHHHHccccccc
ccccccccEEEEccccccccccHHHHHHHHHHHccccccccccccccccEEccccccccccccccccccccccccEEEccccccccccHHcccccccEEEHHHcccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHccccccccEEEcccccccccccHHHHHHHHHccccEEEEcHHHccccccccHHHHHHHHHHHcccccccccccEEEEEccccEEEEEcHHHHHccccccccccccccEEEEEccccccHHHHHHccHHHHHHHHccccccccccccccEEEEEEcccccccccccccEEEEEccccHcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccHccccccccccccccccccccEEEEEEcccccccccccccccccccccHccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHccccccccccEEcccccccEEccHHHHHHHHHHHccccEEEEEccccEEEEcccccHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccc
mccnicripiidyhrhcgncmydlclSCCQDLREAstsvgkeefsendriqdtenaSEQVKTSKLRLNLLekfpgwkanndgsipcppneyggcgyrslnlSRIFKMNWVAKLVKNVEEMVsgckvcdsetllntgsydhslcqyahredrdgnflycpsshdirsegignfrkhwvkgepvivkqvcdsssmsiwdpkdiWRGIREtadektkdeNRIVKaidcldwsEVDIELGEFikgysegrvredgwpemlklkdwpspsaseefllyhkpefisklplLEYIHSRLGFLNvaaklphyslqndvgpkiymsygtyeeldrgnsvknlhfnMPDMVYLLVHMgevklpttedekiqsssresevnesvgdpekvsgegsfpdlslgghdvnnehveksatdedeimedqgvetgtaeektvkserlngysdvsekthpgahwdvfrrqDVPKLIEYLREHwtdfgrpdgvtndfvthplYGEVVYLngdhkrklkeefgvepwsfeqhlgeavfipagcpfqvrnLQSTVQLGldflfpesVGEAVRLAEEIrclpndheaKLQVLEVGKISLYAASSAIKEVQKLvldpklgaelgfedpnltATVSENLENLMKHKQITCA
MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSvgkeefsendriqdtenaseqvktsKLRLNLLEKFpgwkanndgsiPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKqvcdsssmsiwdpkdiwrgiretadektkdenrivkaidcldwsevDIELGEfikgysegrvredgWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLpttedekiqsssresevnesvgdpekvsgegSFPDLSLGGHDVNNEHVeksatdedeimedqgvetgtaeektvkserlngysdvsekthpgahwdvfrRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFEDPNLTATVSENLenlmkhkqitca
MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQsssresevnesvGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFEDPNLTATVSENLENLMKHKQITCA
*CCNICRIPIIDYHRHCGNCMYDLCLSCCQDL*********************************RLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETAD***KDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWP***ASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVK********************************************************************************************GAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFE************************
MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLRE*******************************************ANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLV*****************************QYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADE**KDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSS**E******************************************************************************AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKE*****************************************
MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLR****************************TSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPT**************************GEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFEDPNLTATVSENLENLMKHKQITCA
MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREA*********************************LLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESV***********FPDLSLGGHDVNNEHVEKSA*************************************HPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFEDPNLTATVSENLENLMK*****C*
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MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQVKTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAELGFEDPNLTATVSENLENLMKHKQITCA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query628 2.2.26 [Sep-21-2011]
Q7LBC61761 Lysine-specific demethyla yes no 0.605 0.215 0.306 6e-41
Q6ZPY71562 Lysine-specific demethyla yes no 0.605 0.243 0.304 4e-40
Q6IRB81331 Lysine-specific demethyla N/A no 0.523 0.247 0.299 9e-38
Q5ZIX81325 Lysine-specific demethyla no no 0.541 0.256 0.270 3e-37
Q5HZN11334 Lysine-specific demethyla N/A no 0.523 0.246 0.294 1e-36
Q9Y4C11321 Lysine-specific demethyla no no 0.541 0.257 0.261 2e-35
Q636791214 Lysine-specific demethyla no no 0.546 0.282 0.268 4e-35
Q6PCM11323 Lysine-specific demethyla no no 0.541 0.256 0.262 4e-35
Q156522540 Probable JmjC domain-cont no no 0.337 0.083 0.261 5e-13
Q69ZK62350 Probable JmjC domain-cont no no 0.202 0.054 0.323 2e-12
>sp|Q7LBC6|KDM3B_HUMAN Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2 Back     alignment and function desciption
 Score =  169 bits (428), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 220/476 (46%), Gaps = 96/476 (20%)

Query: 115  KNVEEMVSGCKVCDSETLLNTGSYDHS-LCQYAHREDRDGNFLYCPSSHDIRSEGIGNFR 173
            K V+EMV G  V D  T        HS LC        DG  L      +  +  I  FR
Sbjct: 1364 KEVKEMVMGLNVLDPHT-------SHSWLC--------DGRLLCLHDPSNKNNWKI--FR 1406

Query: 174  KHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV-D 232
            + W +G+PV+V  V       +W P        E   ++  D++  V  ++C + + + D
Sbjct: 1407 ECWKQGQPVLVSGVHKKLKSELWKP--------EAFSQEFGDQD--VDLVNCRNCAIISD 1456

Query: 233  IELGEFIKGYSE--GRVR-EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIH 289
            +++ +F  G+     R+R EDG P +LKLKDWP      + +     + +  LPL EY  
Sbjct: 1457 VKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK 1516

Query: 290  SRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGE 349
             R G LN+A++LP Y ++ D+GPK+Y +YG     DR     NLH ++ D V ++V++G 
Sbjct: 1517 -RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG- 1574

Query: 350  VKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDE 409
              +P  E                                  G HD   E V K+      
Sbjct: 1575 --IPIGE----------------------------------GAHD---EEVLKT------ 1589

Query: 410  IMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDF 469
                  ++ G A+E  V  +R++   D  EK  PGA W ++  +D  K+ E LR+     
Sbjct: 1590 ------IDEGDADE--VTKQRIH---DGKEK--PGALWHIYAAKDAEKIRELLRK----V 1632

Query: 470  GRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVR 529
            G   G  N     P++ +  YL+   +++L EE+GV+ W+  Q LG+AVFIPAG P QV 
Sbjct: 1633 GEEQGQENPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVH 1692

Query: 530  NLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAI 585
            NL S +++  DF+ PE V    RL +E R L N H      L+V  I  +A   A+
Sbjct: 1693 NLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAV 1748
Histone demethylase that specifically demethylates 'Lys-9' of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. May have tumor suppressor activity.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q6ZPY7|KDM3B_MOUSE Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2 Back     alignment and function description
>sp|Q6IRB8|KD3AA_XENLA Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2 SV=1 Back     alignment and function description
>sp|Q5ZIX8|KDM3A_CHICK Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1 Back     alignment and function description
>sp|Q5HZN1|KD3AB_XENLA Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2 SV=1 Back     alignment and function description
>sp|Q9Y4C1|KDM3A_HUMAN Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4 Back     alignment and function description
>sp|Q63679|KDM3A_RAT Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2 SV=1 Back     alignment and function description
>sp|Q6PCM1|KDM3A_MOUSE Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1 Back     alignment and function description
>sp|Q15652|JHD2C_HUMAN Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2 Back     alignment and function description
>sp|Q69ZK6|JHD2C_MOUSE Probable JmjC domain-containing histone demethylation protein 2C OS=Mus musculus GN=Jmjd1c PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query628
359487562 946 PREDICTED: uncharacterized protein LOC10 0.988 0.656 0.720 0.0
255542696 923 transcription factor, putative [Ricinus 0.963 0.655 0.705 0.0
224123112 973 predicted protein [Populus trichocarpa] 0.976 0.630 0.645 0.0
224123790 979 predicted protein [Populus trichocarpa] 0.969 0.622 0.652 0.0
356574955 923 PREDICTED: uncharacterized protein LOC10 0.966 0.657 0.660 0.0
356535073 941 PREDICTED: uncharacterized protein LOC10 0.969 0.647 0.658 0.0
357441701 930 PsbP-like protein [Medicago truncatula] 0.960 0.648 0.645 0.0
449523029 936 PREDICTED: uncharacterized protein LOC10 0.993 0.666 0.599 0.0
449454087 931 PREDICTED: uncharacterized protein LOC10 0.993 0.670 0.599 0.0
296089675490 unnamed protein product [Vitis vinifera] 0.738 0.946 0.733 0.0
>gi|359487562|ref|XP_002279731.2| PREDICTED: uncharacterized protein LOC100249389 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  941 bits (2433), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/633 (72%), Positives = 516/633 (81%), Gaps = 12/633 (1%)

Query: 1   MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQV 60
           MCCN CR+PIIDYHRHC NC YDLCL+CCQDLREAS    K E +E       E  SEQV
Sbjct: 321 MCCNFCRVPIIDYHRHCMNCSYDLCLNCCQDLREASMLGTKGEAAEK------ETLSEQV 374

Query: 61  KTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEM 120
           K +KL+LNL +KFP WK N+DGSIPCPP +YGGCG+ SL L+RIFKMNWVAKLVKNVEEM
Sbjct: 375 KPTKLKLNLADKFPAWKGNDDGSIPCPPKDYGGCGFSSLTLTRIFKMNWVAKLVKNVEEM 434

Query: 121 VSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGE 180
           V+GCKV D  +   T S +   CQ AHRED D NFLYCPSS DI++EGIGNFRKHW++GE
Sbjct: 435 VTGCKVYDINSPQKTRSSNR-FCQSAHREDSDDNFLYCPSSQDIKTEGIGNFRKHWIRGE 493

Query: 181 PVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIK 240
           PVIVKQVCD SS+S WDP  IWRGIRET+DEKTKD+NR VKAIDCLDWSEVDIELG+FIK
Sbjct: 494 PVIVKQVCDDSSISNWDPSVIWRGIRETSDEKTKDDNRTVKAIDCLDWSEVDIELGQFIK 553

Query: 241 GYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAK 300
           GYSEGR+R+DGWPEMLKLKDWPSPSASEE LLY +PEFISK+PLLEYIHS+ G LNVAAK
Sbjct: 554 GYSEGRLRDDGWPEMLKLKDWPSPSASEELLLYQRPEFISKMPLLEYIHSKWGLLNVAAK 613

Query: 301 LPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKI 360
           LPHYSLQNDVGP I++SYGTYEEL  G+SV NLH  M DMVYLLVH  EVKL   ++EKI
Sbjct: 614 LPHYSLQNDVGPNIFISYGTYEELGSGDSVTNLHLEMRDMVYLLVHTSEVKLKGRQEEKI 673

Query: 361 QS---SSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEIMEDQGVE 417
           +    +S ESE  ES GD +    EG  PDLSLGGHD   +H EK   D+DE MEDQG++
Sbjct: 674 EKGKEASMESEAKESPGDVQTSLDEGRTPDLSLGGHDQQGDHGEKLNNDKDEEMEDQGID 733

Query: 418 TGTA-EEKTVKSERLNG-YSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGV 475
           T ++ E KTV  E L+    D+S+ THPGA WDVFRRQDVPKLIEYL+ HW +FG+P   
Sbjct: 734 TTSSVEAKTVNCENLHSDNGDISQITHPGALWDVFRRQDVPKLIEYLQIHWEEFGKPTSA 793

Query: 476 TNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTV 535
           T D V HPLY E ++LN  HK +LKEEFGVEPWSFEQHLG+A+FIPAGCPFQ RNLQSTV
Sbjct: 794 TTDSVQHPLYDEAIFLNRHHKTQLKEEFGVEPWSFEQHLGQAIFIPAGCPFQSRNLQSTV 853

Query: 536 QLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLDP 595
           QLGLDFL PES+GEAVRLA+EIRCLP +HEAK QVLEVGKISLYAASSAIKEVQKLVLDP
Sbjct: 854 QLGLDFLSPESLGEAVRLADEIRCLPTEHEAKRQVLEVGKISLYAASSAIKEVQKLVLDP 913

Query: 596 KLGAELGFEDPNLTATVSENLENLMKHKQITCA 628
           KLG ELGFEDPNLT+ VSENLE +++ +Q+TCA
Sbjct: 914 KLGPELGFEDPNLTSLVSENLEKMIRRRQVTCA 946

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255542696|ref|XP_002512411.1| transcription factor, putative [Ricinus communis] gi|223548372|gb|EEF49863.1| transcription factor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224123112|ref|XP_002318998.1| predicted protein [Populus trichocarpa] gi|222857374|gb|EEE94921.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224123790|ref|XP_002330209.1| predicted protein [Populus trichocarpa] gi|222871665|gb|EEF08796.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356574955|ref|XP_003555608.1| PREDICTED: uncharacterized protein LOC100792166 [Glycine max] Back     alignment and taxonomy information
>gi|356535073|ref|XP_003536073.1| PREDICTED: uncharacterized protein LOC100801287 [Glycine max] Back     alignment and taxonomy information
>gi|357441701|ref|XP_003591128.1| PsbP-like protein [Medicago truncatula] gi|355480176|gb|AES61379.1| PsbP-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449523029|ref|XP_004168527.1| PREDICTED: uncharacterized protein LOC101227379 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449454087|ref|XP_004144787.1| PREDICTED: uncharacterized protein LOC101213201 [Cucumis sativus] Back     alignment and taxonomy information
>gi|296089675|emb|CBI39494.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query628
TAIR|locus:2036014944 AT1G09060 "AT1G09060" [Arabido 0.933 0.620 0.556 3.8e-181
TAIR|locus:2125221840 AT4G00990 "AT4G00990" [Arabido 0.730 0.546 0.358 2.2e-120
TAIR|locus:2008875875 AT1G11950 "AT1G11950" [Arabido 0.563 0.404 0.396 7.1e-109
TAIR|locus:2027109883 AT1G62310 "AT1G62310" [Arabido 0.641 0.456 0.372 2.2e-105
TAIR|locus:2141221927 B160 "AT4G21430" [Arabidopsis 0.820 0.555 0.335 1.9e-67
UNIPROTKB|F1RH751766 KDM3B "Uncharacterized protein 0.270 0.096 0.353 3.5e-41
UNIPROTKB|Q7LBC61761 KDM3B "Lysine-specific demethy 0.273 0.097 0.349 6.8e-41
UNIPROTKB|E1BE971759 LOC100848816 "Uncharacterized 0.273 0.097 0.349 1.4e-40
MGI|MGI:19233561562 Kdm3b "KDM3B lysine (K)-specif 0.273 0.110 0.354 2.4e-40
UNIPROTKB|F1NJZ21755 KDM3B "Uncharacterized protein 0.267 0.095 0.337 4.3e-39
TAIR|locus:2036014 AT1G09060 "AT1G09060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1758 (623.9 bits), Expect = 3.8e-181, P = 3.8e-181
 Identities = 353/634 (55%), Positives = 428/634 (67%)

Query:     1 MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFSENDRIQDTENASEQV 60
             MCCN+CRIP++DY+RHC NC YDLCL CCQDLRE S SV     ++N  +QD + A    
Sbjct:   344 MCCNVCRIPVVDYYRHCPNCSYDLCLRCCQDLREES-SVTISGTNQN--VQDRKGAP--- 397

Query:    61 KTSKLRLNLLEKFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEM 120
                KL+LN   KFP W+AN DGSIPCPP EYGGCG  SLNL+RIFKMNWVAKLVKN EE+
Sbjct:   398 ---KLKLNFSYKFPEWEANGDGSIPCPPKEYGGCGSHSLNLARIFKMNWVAKLVKNAEEI 454

Query:   121 VSGCKVCDSETLLNTGSYDHSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGE 180
             VSGCK+ D   LLN    D   C++A RE+   N++Y PS   I+++G+  F + W +G 
Sbjct:   455 VSGCKLSD---LLNPDMCDSRFCKFAEREESGDNYVYSPSLETIKTDGVAKFEQQWAEGR 511

Query:   181 PVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIK 240
              V VK V D SS S WDP+ IWR I E +DEK ++ +  +KAI+CLD  EVD+ LGEF +
Sbjct:   512 LVTVKMVLDDSSCSRWDPETIWRDIDELSDEKLREHDPFLKAINCLDGLEVDVRLGEFTR 571

Query:   241 GYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAK 300
              Y +G+ +E G P + KLKDWPSPSASEEF+ Y +PEFI   P LEYIH RLG LNVAAK
Sbjct:   572 AYKDGKNQETGLPLLWKLKDWPSPSASEEFIFYQRPEFIRSFPFLEYIHPRLGLLNVAAK 631

Query:   301 LPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGE------VK--- 351
             LPHYSLQND GPKIY+S GTY+E+  G+S+  +H+NM DMVYLLVH  E      V+   
Sbjct:   632 LPHYSLQNDSGPKIYVSCGTYQEISAGDSLTGIHYNMRDMVYLLVHTSEETTFERVRKTK 691

Query:   352 -LPTTEDEKIQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDEDEI 410
              +P   D+K+               PE+   +G   DLSLG   +     E + T   E 
Sbjct:   692 PVPEEPDQKMSENESLLS-------PEQKLRDGELHDLSLGEASMEKNEPELALTVNPEN 744

Query:   411 MEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFG 470
             + + G                N  S  +     GA WDVFRRQDVPKL  YL+     F 
Sbjct:   745 LTENGD---------------NMESSCTSSCAGGAQWDVFRRQDVPKLSGYLQR---TFQ 786

Query:   471 RPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN 530
             +PD +  DFV+ PLY E ++LN  HKR+L++EFGVEPW+FEQH GEA+FIPAGCPFQ+ N
Sbjct:   787 KPDNIQTDFVSRPLY-EGLFLNEHHKRQLRDEFGVEPWTFEQHRGEAIFIPAGCPFQITN 845

Query:   531 LQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQK 590
             LQS +Q+ LDFL PESVGE+ RLAEEIRCLPNDHEAKLQ+LE+GKISLYAASSAIKEVQK
Sbjct:   846 LQSNIQVALDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKISLYAASSAIKEVQK 905

Query:   591 LVLDPKLGAELGFEDPNLTATVSENLENLMKHKQ 624
             LVLDPK GAELGFED NLT  VS NL+   K  Q
Sbjct:   906 LVLDPKFGAELGFEDSNLTKAVSHNLDEATKRPQ 939
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0008270 "zinc ion binding" evidence=IEA
GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2125221 AT4G00990 "AT4G00990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008875 AT1G11950 "AT1G11950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027109 AT1G62310 "AT1G62310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141221 B160 "AT4G21430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1RH75 KDM3B "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q7LBC6 KDM3B "Lysine-specific demethylase 3B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BE97 LOC100848816 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1923356 Kdm3b "KDM3B lysine (K)-specific demethylase 3B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJZ2 KDM3B "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00022742001
SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (917 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
pfam02373114 pfam02373, JmjC, JmjC domain, hydroxylase 1e-08
>gnl|CDD|202224 pfam02373, JmjC, JmjC domain, hydroxylase Back     alignment and domain information 
 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 445 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFG 504
            ++  F    V  +I    E+   F   + V +          +++LN     K   E G
Sbjct: 23  INYLHFGGPKVWYIIPS--EYAEKF---EKVLSKHNGGEQPDLLLHLNTIISPKQLLENG 77

Query: 505 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTV 535
           +  + F Q  GE VF   G   QV NL   +
Sbjct: 78  IPVYRFVQKPGEFVFTFPGWYHQVFNLGFNI 108

The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalyzing hydroxylation. Length = 114

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 628
KOG1356889 consensus Putative transcription factor 5qNCA, con 100.0
PF02373114 JmjC: JmjC domain, hydroxylase; InterPro: IPR01312 99.59
PF13621251 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XU 99.13
KOG2131427 consensus Uncharacterized conserved protein, conta 97.2
smart0055857 JmjC A domain family that is part of the cupin met 97.17
cd0234043 ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger pre 95.8
cd0233549 ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present 95.56
cd0233945 ZZ_Mind_bomb Zinc finger, ZZ type. Zinc finger pre 95.21
cd0224946 ZZ Zinc finger, ZZ type. Zinc finger present in dy 95.03
KOG2130407 consensus Phosphatidylserine-specific receptor Ptd 94.63
PF0788371 Cupin_2: Cupin domain; InterPro: IPR013096 This fa 93.73
COG1917131 Uncharacterized conserved protein, contains double 93.46
cd0234148 ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present 92.61
cd0234549 ZZ_dah Zinc finger, ZZ type. Zinc finger present i 92.39
PF0056946 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc 92.16
smart0029144 ZnF_ZZ Zinc-binding domain, present in Dystrophin, 92.13
cd0234445 ZZ_HERC2 Zinc finger, ZZ type. Zinc finger present 91.96
COG0662127 {ManC} Mannose-6-phosphate isomerase [Carbohydrate 91.37
cd0233849 ZZ_PCMF_like Zinc finger, ZZ type. Zinc finger pre 91.07
cd0233741 ZZ_CBP Zinc finger, ZZ type. Zinc finger present i 90.2
TIGR03214260 ura-cupin putative allantoin catabolism protein. T 88.56
PRK09943185 DNA-binding transcriptional repressor PuuR; Provis 85.59
cd0234348 ZZ_EF Zinc finger, ZZ type. Zinc finger present in 84.84
PF0764930 C1_3: C1-like domain; InterPro: IPR011424 This sho 84.8
cd0233449 ZZ_dystrophin Zinc finger, ZZ type. Zinc finger pr 84.5
PRK13290125 ectC L-ectoine synthase; Reviewed 83.72
PF01050151 MannoseP_isomer: Mannose-6-phosphate isomerase; In 80.88
COG4101142 Predicted mannose-6-phosphate isomerase [Carbohydr 80.47
>KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription] Back     alignment and domain information 
Probab=100.00  E-value=9.3e-162  Score=1340.85  Aligned_cols=513  Identities=34%  Similarity=0.553  Sum_probs=435.9

Q ss_pred             CccCCCCCccccccccCCCCCcchhhhhhHHhhhcccCCCCcccc---------cccccccccchhhhhhhhhhhhcccc
Q 006870            1 MCCNICRIPIIDYHRHCGNCMYDLCLSCCQDLREASTSVGKEEFS---------ENDRIQDTENASEQVKTSKLRLNLLE   71 (628)
Q Consensus         1 m~Cd~C~tsI~D~HRsC~~CsydLCL~CC~elr~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (628)
                      .|||+|.|||.|+||+||+|||.+||.||.+||+|.+..+.+...         ++|...- ++....  .+.   .  .
T Consensus       363 ~~~~~~~~si~~l~r~cP~~s~~~~l~~~~~i~~g~l~~~~e~~~~~~~r~~~~~~g~~~~-~~~~~s--~~~---~--~  434 (889)
T KOG1356|consen  363 LYCDHCATSIGDLKRSCPDSSYAICLPWLADLRRGDLKEKEECELMLRSRGVKYEHGPDPI-EPSLSS--VSV---D--E  434 (889)
T ss_pred             ccccccccchhhccccCCCccccccchHHHHhhcCCcccchhHHHHHHHHHHHhhcCcccc-ccccCC--CCC---C--C
Confidence            489999999999999999999999999999999998876654322         1221110 000000  000   0  0


Q ss_pred             CCCCcccCCCCCccCCCCCCCCCCCCccccccccccchHHHHHHHHHHHHhcCCCcCCCCcc-CCCCCCcccccccccCC
Q 006870           72 KFPGWKANNDGSIPCPPNEYGGCGYRSLNLSRIFKMNWVAKLVKNVEEMVSGCKVCDSETLL-NTGSYDHSLCQYAHRED  150 (628)
Q Consensus        72 ~~~~W~a~~dgsi~Cpp~e~ggCg~~~L~L~~if~~~~i~~L~~~aee~~~~~~~~~~~~~~-~~~~~~~~~~~aa~re~  150 (628)
                      . +.  ++++|+|.|-|...+||+...|.|+|++|..|.+.|+.+||.-+...-..-..... .+....+.++++|.|+.
T Consensus       435 ~-~~--~~~ng~~r~l~~~~~g~~~~~l~lkr~lpn~~~s~i~~~vE~k~~~~~~~~~l~~~~~~~~~~~~~~s~~~~~~  511 (889)
T KOG1356|consen  435 P-SS--ANENGSLRDLLLSLAGCLDRGLKLKRILPNILDSIIASVVENKLTSKLSKPPLRLCRSSQDGSGLLLSAASHSW  511 (889)
T ss_pred             C-cc--cccccchhhcccccCccchhhhhhhhcCchHHHHHHHHHHHhhcccccCCchhhcCccccccccCccccCCCCc
Confidence            1 12  88899999999999999999999999999999999999999988651111111111 11112335789999999


Q ss_pred             CCCCceecCCccccccccHHHHHHHhhcCCCEEEecccccCCCCCCChhhhhhhhhhhcccccccccCceEEEecCCCCe
Q 006870          151 RDGNFLYCPSSHDIRSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSE  230 (628)
Q Consensus       151 s~dn~ly~P~~~d~~~~~l~hFQ~hW~kGePVIVr~Vl~~~s~lsW~P~~mwr~~~e~~~~~~~~~~~~v~aidCld~~e  230 (628)
                      +.|||||||.+.+++.+|+.|||+||++|||||||||++++++++|+||+|||+|++.-..-..-.+.++.++||++   
T Consensus       512 ~cdn~Ll~l~~d~~~~~n~~~FQEhWkqGqPViVs~V~~~l~g~lW~P~a~~~~~g~q~~~l~n~~~~~i~s~d~~~---  588 (889)
T KOG1356|consen  512 LCDNRLLSLKVDPLNQNNLKHFQEHWKQGQPVIVSGVHKKLNGLLWKPEALSRAFGDQVVDLSNCNNSQIISNDCVD---  588 (889)
T ss_pred             CCCCceecCccCccchhHHHHHHHHHhcCCcEEehHhhhhccccccchHHHHHHhccchhhhhcCCCCCccccchhh---
Confidence            99999999999899999999999999999999999999999999999999999998875444434556677777777   


Q ss_pred             eecccccccccccCCcccCCCCceeeeeCCCCCchhhHHhhhhcchHHHhcCCCccccCCCCccchhcccCCCCCCCCCC
Q 006870          231 VDIELGEFIKGYSEGRVREDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDV  310 (628)
Q Consensus       231 v~i~i~qFf~Gy~~gr~~~~g~p~mLKLKDWPps~~Fee~lP~h~~efi~~LP~~EYt~pr~G~LNLAs~LP~~~lkPDL  310 (628)
                         ++.+||.||++|+++++|||+|||||||||+++|+++||+||+|||++|||||||| |+|+||||++||.+|++|||
T Consensus       589 ---~fwegFe~~~kr~~~~~g~p~vLKLKDWpp~~~Fkd~lP~r~eell~sLPlpEYt~-r~G~LNlAs~LP~~fv~PDL  664 (889)
T KOG1356|consen  589 ---NFWEGFEGYSKRLKSENGWPEVLKLKDWPPGEDFKDMLPRRFEELLASLPLPEYTD-RDGKLNLASKLPEGFVRPDL  664 (889)
T ss_pred             ---hHHHhhcccccCcccccCCeeEEeecCCCchHhHhhhhhHHHHHHHHcCCchhhhc-CCCccchHhhCcccccCCCC
Confidence               68999999999999999999999999999999999999999999999999999999 89999999999999999999


Q ss_pred             CCcccccccccccccCCCCcceeeeeccccceeeeecccccCCCchhHHhhhccccccccccCCCCCccCCCCCCCCCCC
Q 006870          311 GPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSL  390 (628)
Q Consensus       311 GPK~YIAYG~~eelg~gdSvTkLH~DmSDAVNIL~h~~ev~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  390 (628)
                      |||||||||+++++|||||||||||||||||||||||++++....|   |++++++..             +|++.++..
T Consensus       665 GPk~y~AYG~~~e~gr~~gtTnLH~dvSDaVNILvyv~e~~~~~~~---~~~~~k~~~-------------~~~~de~~~  728 (889)
T KOG1356|consen  665 GPKLYNAYGVSTELGRGDGTTNLHLDVSDAVNILVYVGEPPGQIEQ---IAKVLKKIQ-------------EGDLDEITR  728 (889)
T ss_pred             CchhhhhccccccccCCCCceeeceehhhhhhheeeeccCCchHHh---HHHHHHhhh-------------hcchhhhhh
Confidence            9999999999999999999999999999999999999999884444   444433222             121111100


Q ss_pred             CCCCCCcccccccccchhhhhhhcCcccccccccccccccccCCCCCCCCCCCceEEEEecCCChHHHHHHHHHHHHhhC
Q 006870          391 GGHDVNNEHVEKSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFG  470 (628)
Q Consensus       391 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWdIFrreDv~KLreyL~kh~~Ef~  470 (628)
                                                          .  +.     .+..+.+|||||||||||||||||||+||++|||
T Consensus       729 ------------------------------------~--~~-----~~~~e~~GALWhIF~~~Dv~KireyL~k~~~E~~  765 (889)
T KOG1356|consen  729 ------------------------------------S--RI-----SSVSETPGALWHIFRAQDVPKIREYLRKVCKEQG  765 (889)
T ss_pred             ------------------------------------h--hc-----cccccCCcchhhhhhhcchHHHHHHHHHhhHHhc
Confidence                                                0  00     0345789999999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHH
Q 006870          471 RPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEA  550 (628)
Q Consensus       471 ~~~~~~~~~v~hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec  550 (628)
                      |.    +.+|+||||||+||||.+||+|||||||||||||+|+||||||||||||||||||+||||||+||||||||.||
T Consensus       766 ~~----~~~v~hPIhDQS~YLd~~lr~RLkeEyGVe~WtfvQ~LGdAVfIPAGaPHQVrNLkSCikVa~DFVSPE~v~ec  841 (889)
T KOG1356|consen  766 HE----VPKVHHPIHDQSWYLDRYLRRRLKEEYGVEPWTFVQFLGDAVFIPAGAPHQVRNLKSCIKVAEDFVSPEHVSEC  841 (889)
T ss_pred             CC----CCcccCCCcccceeccHHHHHHHHHHhCCCccchhhcccceEEecCCCcHHhhhhhhHHHHHHhhCChhhHHHH
Confidence            93    34589999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCcchhhhhhhhhhhHHHHHHHHHHHHHHHhccC
Q 006870          551 VRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSAIKEVQKLVLD  594 (628)
Q Consensus       551 ~rLteEfR~Lp~~H~~K~d~Levkkm~lya~~~avke~~~l~~~  594 (628)
                      +|||+|||+||++|.+++||||||+|++||+..||++|+.+..+
T Consensus       842 ~rLT~EfR~Lp~~h~~~eDKLqvK~mi~hAVk~Av~~L~~~~s~  885 (889)
T KOG1356|consen  842 FRLTQEFRQLPQNHKNHEDKLQVKNMIYHAVKDAVGTLKEAESS  885 (889)
T ss_pred             HHHHHHHhhCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999999998765

>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [] Back     alignment and domain information
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A Back     alignment and domain information
>KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] Back     alignment and domain information
>smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily Back     alignment and domain information
>cd02340 ZZ_NBR1_like Zinc finger, ZZ type Back     alignment and domain information
>cd02335 ZZ_ADA2 Zinc finger, ZZ type Back     alignment and domain information
>cd02339 ZZ_Mind_bomb Zinc finger, ZZ type Back     alignment and domain information
>cd02249 ZZ Zinc finger, ZZ type Back     alignment and domain information
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms] Back     alignment and domain information
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel) Back     alignment and domain information
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] Back     alignment and domain information
>cd02341 ZZ_ZZZ3 Zinc finger, ZZ type Back     alignment and domain information
>cd02345 ZZ_dah Zinc finger, ZZ type Back     alignment and domain information
>PF00569 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>smart00291 ZnF_ZZ Zinc-binding domain, present in Dystrophin, CREB-binding protein Back     alignment and domain information
>cd02344 ZZ_HERC2 Zinc finger, ZZ type Back     alignment and domain information
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd02338 ZZ_PCMF_like Zinc finger, ZZ type Back     alignment and domain information
>cd02337 ZZ_CBP Zinc finger, ZZ type Back     alignment and domain information
>TIGR03214 ura-cupin putative allantoin catabolism protein Back     alignment and domain information
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional Back     alignment and domain information
>cd02343 ZZ_EF Zinc finger, ZZ type Back     alignment and domain information
>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines Back     alignment and domain information
>cd02334 ZZ_dystrophin Zinc finger, ZZ type Back     alignment and domain information
>PRK13290 ectC L-ectoine synthase; Reviewed Back     alignment and domain information
>PF01050 MannoseP_isomer: Mannose-6-phosphate isomerase; InterPro: IPR001538 Mannose-6-phosphate isomerase or phosphomannose isomerase (5 Back     alignment and domain information
>COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
2ypd_A392 Crystal Structure Of The Jumonji Domain Of Human Ju 6e-27
>pdb|2YPD|A Chain A, Crystal Structure Of The Jumonji Domain Of Human Jumonji Domain Containing 1c Protein Length = 392 Back     alignment and structure 
Iteration: 1

 Score =  119 bits (297), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 78/404 (19%)
Query: 172 FRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEV 231
           F++ W +G+P +V  V    ++S+W  + I     +  D +          ++C D    
Sbjct: 27  FKECWKQGQPAVVSGVHKKMNISLWKAESI---SLDFGDHQAD-------LLNCKDSIIS 76
Query: 232 DIELGEFIKGYSEGRVRE---DGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYI 288
           +  + EF  G+ E   R+    G   +LKLKDWPS    +  +     + +  LPL EY 
Sbjct: 77  NANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYC 136
Query: 289 HSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTYEELDRGNSVKNLHFNMPDMVYLLVHMG 348
           +   G  N+A+ LP + ++ D+GP++  +YG     D      NLH  + D+V +LV++G
Sbjct: 137 NPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG 195
Query: 349 EVKLPTTEDEKIQXXXXXXXXXXXXGDPEKVSGEGSFPDLSLGGHDVNNEHVEKSATDED 408
             K                             G G    LS  G       + K   +ED
Sbjct: 196 IAK-----------------------------GNGI---LSKAG-------ILKKFEEED 216
Query: 409 EIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTD 468
             ++D            +  +RL   S++     PGA W ++  +DV K+ E+L++    
Sbjct: 217 --LDD------------ILRKRLKDSSEI-----PGALWHIYAGKDVDKIREFLQK---- 253
Query: 469 FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQV 528
             +  G+       P+  +  Y+N   +++L EE+GV   +  Q LG+A+ +PAG   QV
Sbjct: 254 ISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313
Query: 529 RNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN--DHEAKLQV 570
           +N  S +Q+  DF+ PE + E+  L +E+R L    +++ KLQV
Sbjct: 314 QNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINYDDKLQV 357

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.9 bits (126), Expect = 3e-07
 Identities = 87/642 (13%), Positives = 185/642 (28%), Gaps = 184/642 (28%)

Query: 28  CCQDLREASTSVGKEEFSENDRIQDTENASEQVKTSK---------------LRL----- 67
             +D+     SV ++ F +N   +D ++  + + + +               LRL     
Sbjct: 17  QYKDI----LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 68  ----NLLEKFPG--------W------KANNDGSIPCPPNEYGGCGYRSLNLSRIF-KMN 108
                +++KF          +            S+      Y     R  N +++F K N
Sbjct: 73  SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM--MTRMYIEQRDRLYNDNQVFAKYN 130

Query: 109 -WVAKLVKNVEEMVS--------------GC-K------VCDSETL----------LNTG 136
               +    + + +               G  K      VC S  +          LN  
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 137 SYD---------HSLCQYAHREDRDGNFLYCPSSHDIRSEGIGNFRKHWVKGEP-VIVKQ 186
           + +           L    ++ D +        S +I+       R H ++ E   ++K 
Sbjct: 191 NCNSPETVLEMLQKLL---YQIDPNWTSR-SDHSSNIK------LRIHSIQAELRRLLKS 240

Query: 187 VCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAID--C--LDWSEV---DIELGEFI 239
               + + +    ++                +   A +  C  L    +     ++ +F+
Sbjct: 241 KPYENCLLVLL--NVQ-------------NAKAWNAFNLSCKIL----LTTRFKQVTDFL 281

Query: 240 KGYSEGRVREDGWPEMLKLKDWPSPSASEEFL---LYHKPEFISKLPLLEYIHSRLGFLN 296
              +   +  D     L      +P   +  L   L  +P+    LP      +      
Sbjct: 282 SAATTTHISLDHHSMTL------TPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSI 332

Query: 297 VAAKLPHYSLQNDVGPKIYMSYGTYEELDR--GNSVKNLHFNMPDMVY--LLVHMGEVKL 352
           +A  +       D        +   ++L     +S+  L       ++  L V      +
Sbjct: 333 IAESIRDGLATWD-----NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387

Query: 353 PTTEDEKIQSSSRESEVNESVGDPEKVS-GEGSFPDLSLGGHDVNNEHVEKSATDEDEI- 410
           PT     I     +S+V   V    K S  E    + ++    +   ++E     E+E  
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI---YLELKVKLENEYA 444

Query: 411 MEDQGVE----TGTAEEKTVKSERLNGYSDVSEKTHPGAH---------WDVFRR--QDV 455
           +    V+      T +   +    L+ Y      +H G H           +FR    D 
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYF----YSHIGHHLKNIEHPERMTLFRMVFLDF 500

Query: 456 PKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLG 515
             L + +R   T +     + N       Y   +  N     +L          F   + 
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL----DFLPKIE 556

Query: 516 EAVFIPAGCPFQVRNLQSTVQLGLDFLFPES--VGEAVRLAE 555
           E +       +   +L   +++ L  +  +     EA +  +
Sbjct: 557 ENLIC---SKY--TDL---LRIAL--MAEDEAIFEEAHKQVQ 588
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query628
2ypd_A392 Probable JMJC domain-containing histone demethyla 100.0
4gjz_A235 Lysine-specific demethylase 8; JMJC, beta barrel, 99.33
3k2o_A336 Bifunctional arginine demethylase and lysyl-hydro 99.25
2yu1_A451 JMJC domain-containing histone demethylation PROT; 99.19
3kv5_D488 JMJC domain-containing histone demethylation prote 99.15
3k3o_A371 PHF8, PHD finger protein 8; histone demethylase, c 99.12
3kv4_A447 PHD finger protein 8; epigenetics, histone CODE, c 99.11
3kv9_A397 JMJC domain-containing histone demethylation prote 99.08
3pua_A392 GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe 99.06
3al5_A338 HTYW5, JMJC domain-containing protein C2ORF60; tRN 99.0
3d8c_A349 Hypoxia-inducible factor 1 alpha inhibitor; FIH, H 98.94
3pur_A528 Lysine-specific demethylase 7 homolog; oxidoreduct 98.49
2xxz_A332 Lysine-specific demethylase 6B; oxidoreductase, hi 97.76
3avr_A531 Lysine-specific demethylase 6A; cupin superfamily, 97.66
4ask_A510 Lysine-specific demethylase 6B; oxidoreductase, KD 97.33
3dxt_A354 JMJC domain-containing histone demethylation PROT; 96.68
3opt_A373 DNA damage-responsive transcriptional repressor R; 96.27
2ox0_A381 JMJC domain-containing histone demethylation PROT; 95.95
1vrb_A342 Putative asparaginyl hydroxylase; 2636534, structu 95.01
2opk_A112 Hypothetical protein; putative mannose-6-phosphate 92.72
1yhf_A115 Hypothetical protein SPY1581; structural genomics, 92.6
2pfw_A116 Cupin 2, conserved barrel domain protein; cupin do 92.38
3fjs_A114 Uncharacterized protein with RMLC-like cupin fold; 92.16
3ht1_A145 REMF protein; cupin fold, Zn-binding, antibiotic b 92.16
3h8u_A125 Uncharacterized conserved protein with double-STR 91.88
2q30_A110 Uncharacterized protein; double-stranded beta-heli 91.84
1v70_A105 Probable antibiotics synthesis protein; structural 91.58
3lag_A98 Uncharacterized protein RPA4178; functionally unkn 91.37
2xlg_A239 SLL1785 protein, CUCA; metal binding protein, cupi 91.11
4e2g_A126 Cupin 2 conserved barrel domain protein; MCSG, PSI 91.09
1juh_A350 Quercetin 2,3-dioxygenase; cupin, glycoprotein, be 90.66
2b8m_A117 Hypothetical protein MJ0764; structural genomics, 90.53
2gu9_A113 Tetracenomycin polyketide synthesis protein; X-RAY 90.48
2ozj_A114 Cupin 2, conserved barrel; cupin superfamily prote 90.31
3ibm_A167 Cupin 2, conserved barrel domain protein; cupin 2 90.21
2fqp_A97 Hypothetical protein BP2299; double-stranded beta- 90.21
3d82_A102 Cupin 2, conserved barrel domain protein; structur 90.03
3kgz_A156 Cupin 2 conserved barrel domain protein; metallopr 89.88
1o5u_A101 Novel thermotoga maritima enzyme TM1112; cupin, st 89.84
3h7j_A243 Bacilysin biosynthesis protein BACB; YWFC, bacilys 89.19
2i45_A107 Hypothetical protein; neisseria meningitidis cupin 89.06
2dip_A98 Zinc finger SWIM domain-containing protein 2; ZZ d 88.98
2ozi_A98 Hypothetical protein RPA4178; APC6210, putative pr 87.85
2fc7_A82 ZZZ3 protein; structure genomics, ZZ domain, struc 87.77
1y9q_A192 Transcriptional regulator, HTH_3 family; transcrip 87.64
2e5r_A63 Dystrobrevin alpha; ZZ domain, structural genomics 87.6
3cew_A125 Uncharacterized cupin protein; all beta-protein, j 87.56
1lr5_A163 Auxin binding protein 1; beta jellyroll, double st 87.47
2oa2_A148 BH2720 protein; 10175341, structural genomics, joi 87.18
3l2h_A162 Putative sugar phosphate isomerase; AFE_0303, stru 86.69
3jzv_A166 Uncharacterized protein RRU_A2000; structural geno 86.61
1vj2_A126 Novel manganese-containing cupin TM1459; structura 85.56
1tot_A52 CREB-binding protein; zinc binding, CBP, TAZ2, tra 85.31
4axo_A151 EUTQ, ethanolamine utilization protein; structural 85.31
1x82_A190 Glucose-6-phosphate isomerase; cupin superfamily, 85.29
4i4a_A128 Similar to unknown protein; structural genomics, P 85.04
2o8q_A134 Hypothetical protein; cpuin-like fold, structural 84.93
4h7l_A157 Uncharacterized protein; structural genomics, PSI- 84.91
3lwc_A119 Uncharacterized protein; structural genomics, unkn 83.82
3rns_A227 Cupin 2 conserved barrel domain protein; structura 83.07
3bcw_A123 Uncharacterized protein; structural genomics, join 82.97
3i7d_A163 Sugar phosphate isomerase; YP_168127.1, structural 82.89
2bnm_A198 Epoxidase; oxidoreductase, cupin, HTH, cation-depe 82.72
1fi2_A201 Oxalate oxidase, germin; beta-jellyroll, oxidoredu 82.56
1y3t_A337 Hypothetical protein YXAG; BI cupin, dioxygenase, 82.34
2f4p_A147 Hypothetical protein TM1010; double-stranded beta- 81.03
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=3.5e-134  Score=1061.56  Aligned_cols=353  Identities=28%  Similarity=0.475  Sum_probs=273.4

Q ss_pred             ccccHHHHHHHhhcCCCEEEecccccCCCCCCChhhhhhhhhhhcccccccccCceEEEecCCCCeeecccccccccccC
Q 006870          165 RSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSE  244 (628)
Q Consensus       165 ~~~~l~hFQ~hW~kGePVIVr~Vl~~~s~lsW~P~~mwr~~~e~~~~~~~~~~~~v~aidCld~~ev~i~i~qFf~Gy~~  244 (628)
                      ..+|++|||+||++|||||||||++++++++|+|++|||+|++          ..+++|||++|++++|++++||+||++
T Consensus        20 ~~~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd----------~~~~lidC~~~~~~~i~v~~Ff~Gf~~   89 (392)
T 2ypd_A           20 NSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGD----------HQADLLNCKDSIISNANVKEFWDGFEE   89 (392)
T ss_dssp             CTTHHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTT----------SCCCCEETTTCCBCSCCHHHHHHTSSB
T ss_pred             CcccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcC----------ceeeeeeCCCCccccCcHHHHhhhccc
Confidence            3479999999999999999999999999999999999998753          236789999999999999999999999


Q ss_pred             Cccc---CCCCceeeeeCCCCCchhhHHhhhhcchHHHhcCCCccccCCCCccchhcccCCCCCCCCCCCCccccccccc
Q 006870          245 GRVR---EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTY  321 (628)
Q Consensus       245 gr~~---~~g~p~mLKLKDWPps~~Fee~lP~h~~efi~~LP~~EYt~pr~G~LNLAs~LP~~~lkPDLGPK~YIAYG~~  321 (628)
                      ++.+   ++|||+|||||||||+++|+|+||+||+|||++||||||||| +|+|||||+||+++++||||||||||||++
T Consensus        90 ~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p-~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~  168 (392)
T 2ypd_A           90 VSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVV  168 (392)
T ss_dssp             GGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHST-TCTTCCTTTSCGGGCC---CCEEEEECCST
T ss_pred             cccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCC-CccchHHHhCCCCCCCCCCCcchhhhcCcc
Confidence            8764   699999999999999999999999999999999999999998 599999999999999999999999999999


Q ss_pred             ccccCCCCcceeeeeccccceeeeecccccCCCchhHHhhhccccccccccCCCCCccCCCCCCCCCCCCCCCCCccccc
Q 006870          322 EELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVE  401 (628)
Q Consensus       322 eelg~gdSvTkLH~DmSDAVNIL~h~~ev~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~  401 (628)
                      +++|+|+|||||||||||||||||||++++....... .+.+              +.++++++++.          .  
T Consensus       169 ~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~~-~~~l--------------~~~~~~~~d~~----------~--  221 (392)
T 2ypd_A          169 AAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSK-AGIL--------------KKFEEEDLDDI----------L--  221 (392)
T ss_dssp             TTTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCCH-HHHH--------------HHHHTSCCCHH----------H--
T ss_pred             hhcccCCCcceeeeehhhhhhhhheecccCccccchh-hhhh--------------hhhhhccccHH----------H--
Confidence            9999999999999999999999999998765443211 0101              01111211110          0  


Q ss_pred             ccccchhhhhhhcCcccccccccccccccccCCCCCCCCCCCceEEEEecCCChHHHHHHHHHHHHhhCCCCCCCCCccc
Q 006870          402 KSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVT  481 (628)
Q Consensus       402 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~GAlWdIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~  481 (628)
                            .+                    +.     .+.++.+||+||||||||++|||+||++|++||+.+.    ..+.
T Consensus       222 ------~~--------------------r~-----~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~~~~~----~~~~  266 (392)
T 2ypd_A          222 ------RK--------------------RL-----KDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEV----LPEH  266 (392)
T ss_dssp             ------HH--------------------HH-----TCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHHC----------C
T ss_pred             ------hh--------------------hc-----cCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhhCCCc----cCCC
Confidence                  00                    01     1345689999999999999999999999999997653    3478


Q ss_pred             CCCcCcceeeCHHHHHHHHHHhCccceEEEeecCceEEeCCCCcccccccCCcceeeccccCCcCHHHHHHHHHHHhcCC
Q 006870          482 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLP  561 (628)
Q Consensus       482 hPIHDQ~fYLd~~hk~kLkeEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ec~rLteEfR~Lp  561 (628)
                      ||||||+||||++||++|+|||||+||||+|++|||||||||||||||||+||||||+||||||||++|++||+|||+||
T Consensus       267 dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~l~  346 (392)
T 2ypd_A          267 DPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLK  346 (392)
T ss_dssp             CHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC----
T ss_pred             CcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             CcchhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 006870          562 NDHEAKLQVLEVGKISLYAASSAIKEVQKL  591 (628)
Q Consensus       562 ~~H~~K~d~Levkkm~lya~~~avke~~~l  591 (628)
                       +|++|+||||||+|++||++.||++|++.
T Consensus       347 -~~~~~edkLqvk~m~~~av~~av~~l~~~  375 (392)
T 2ypd_A          347 -EEINYDDKLQVKNILYHAVKEMVRALKIH  375 (392)
T ss_dssp             ------------------------------
T ss_pred             -hhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence             69999999999999999999999999973
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A* Back     alignment and structure
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A* Back     alignment and structure
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A Back     alignment and structure
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A* Back     alignment and structure
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A* Back     alignment and structure
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens} Back     alignment and structure
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A* Back     alignment and structure
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A* Back     alignment and structure
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A* Back     alignment and structure
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ... Back     alignment and structure
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* Back     alignment and structure
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens} Back     alignment and structure
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A* Back     alignment and structure
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A* Back     alignment and structure
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A* Back     alignment and structure
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A* Back     alignment and structure
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A* Back     alignment and structure
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11 Back     alignment and structure
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha} Back     alignment and structure
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9 Back     alignment and structure
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina} Back     alignment and structure
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134} Back     alignment and structure
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A Back     alignment and structure
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp} Back     alignment and structure
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A Back     alignment and structure
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris} Back     alignment and structure
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A Back     alignment and structure
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus} Back     alignment and structure
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A* Back     alignment and structure
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18 Back     alignment and structure
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A Back     alignment and structure
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense} Back     alignment and structure
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1} Back     alignment and structure
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I} Back     alignment and structure
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400} Back     alignment and structure
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris} Back     alignment and structure
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A Back     alignment and structure
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A* Back     alignment and structure
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis} Back     alignment and structure
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6 Back     alignment and structure
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6 Back     alignment and structure
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15 Back     alignment and structure
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis} Back     alignment and structure
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A* Back     alignment and structure
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans} Back     alignment and structure
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans} Back     alignment and structure
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10 Back     alignment and structure
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6 Back     alignment and structure
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile} Back     alignment and structure
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A* Back     alignment and structure
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp} Back     alignment and structure
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans} Back     alignment and structure
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus} Back     alignment and structure
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum} Back     alignment and structure
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis} Back     alignment and structure
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50} Back     alignment and structure
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3} Back     alignment and structure
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A Back     alignment and structure
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A Back     alignment and structure
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A* Back     alignment and structure
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query628
d1h2ka_335 Hypoxia-inducible factor HIF ihhibitor (FIH1) {Hum 99.13
d1vrba1319 Putative asparaginyl hydroxylase YxbC {Bacillus su 98.84
d1v70a_105 Hypothetical protein TTHA0104 {Thermus thermophilu 95.36
d1vj2a_114 Hypothetical protein TM1459 {Thermotoga maritima [ 94.52
d2b8ma1108 Hypothetical protein MJ0764 {Archaeon Methanococcu 93.96
d1yhfa1112 Hypothetical protein SPy1581 {Streptococcus pyogen 93.28
d1rc6a_253 Hypothetical protein YlbA {Escherichia coli [TaxId 91.97
d1lr5a_160 Auxin binding protein {Maize (Zea mays) [TaxId: 45 90.98
d1o4ta_115 Hypothetical protein TM1287 {Thermotoga maritima [ 90.89
d2dipa185 Zinc finger ZZ-type-containing protein 2 {Human (H 90.73
d2fc7a169 Zinc finger ZZ-type-containing protein 3, ZZZ3 {Hu 90.34
d1sefa_250 Hypothetical protein EF2996 {Enterococcus faecalis 89.3
d2bnma2122 Hydroxypropylphosphonic acid epoxidase Fom4, C-ter 87.76
d1sfna_245 Hypothetical protein DR1152 {Deinococcus radiodura 85.63
d1juha_348 Quercetin 2,3-dioxygenase {Aspergillus japonicus [ 83.81
d1sq4a_273 Glyoxylate-induced protein PA1140 {Pseudomonas aer 82.73
d1x82a_190 Glucose-6-phosphate isomerase, GPI {Archaeon Pyroc 82.19
d1juha_ 348 Quercetin 2,3-dioxygenase {Aspergillus japonicus [ 80.16
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Hypoxia-inducible factor HIF ihhibitor (FIH1)
domain: Hypoxia-inducible factor HIF ihhibitor (FIH1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.1e-11  Score=125.43  Aligned_cols=39  Identities=15%  Similarity=0.287  Sum_probs=35.7

Q ss_pred             hCccceEEEeecCceEEeCCCCcccccccCC-cceeeccc
Q 006870          503 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS-TVQLGLDF  541 (628)
Q Consensus       503 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS-CIKVAlDF  541 (628)
                      .++.+|.+++.+||++|||+|..|||+||.+ ||.|++.|
T Consensus       242 ~~~~~~~~~l~pGd~L~iP~~w~H~V~~~~~~~~sisvn~  281 (335)
T d1h2ka_         242 QNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNF  281 (335)
T ss_dssp             GGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred             hcCCceEEEECCCCEEeeCCCCeEEEEEcCCCCeEEEEEe
Confidence            4567999999999999999999999999965 89999998
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase Fom4, C-terminal domain {Streptomyces wedmorensis [TaxId: 43759]} Back     information, alignment and structure
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} Back     information, alignment and structure
>d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus japonicus [TaxId: 34381]} Back     information, alignment and structure