Citrus Sinensis ID: 006872

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------63
MGRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPTKGN
ccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHcccccEEccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccccccccccccccccHHHHHHHHcHHHHHHHHHcccHHHccccccccccccccHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccccccccEEEccccccccccccccHHHHHHccccccccEEEcccccHHHHHcccccEEEEEEccccccccccccccccccHHHHHHHHHHHccccEEEEEEcccccccccccccHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHcccccccHHHcccccHHHHHHHHHccccHHHHHHHcEEEEHHHccHHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHcccccEEcccEcccccccccccHHHcccccHHHHHHHHHHHHHHHccccccccccccccccccccEcEEEEEccHHHcHHHccccEEcccHHHHHHHccHHHHHHHHccccEEEEcccEEccEEHHHcHHHHHHHHHcccccccEEEccccccHHHcccccccHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccHHHHHHHHHHHHHHcEEEEEccccccccccccccccEEEEEccccccHHHHHccccccccccccccccccEcHHHHHHHHcccccEEEEEccccHHHHHHcccccEEEEEEcccccHHHHcccccccccccHHHHHHHHccccEEEEEEcccccccHHHHHHccEEEEEEccccEcHHHHHHHcccccccccccccEcccHHHcccccccccccccEcccccEcccccccc
MGRFSVPMLGFLLLCFLAAVTEAtyikykdpkqplgARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSvlsgggsvpapkatAETWVNMVNGLQKgalstrlgipmiygidavhghnnvykatifphnvglgvtrdpalvkkigdATALEVRatgipyvfapciavcrdprwgrcyesysEDHKIVQAMTEIIpglqgdlpanskkgvpfvagKKKVAACAKHyvgdggttkginenntvinLNGLLSIHMPAYYNSISKGVATVMVSYSSwngkkmhanHELVTGFLKNKLKFrgfvisdwegidritapphanysySVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKkniipmsrIDDAVKRILRVKFVMglfdspladtsLVNELGSQEHRELAREAVRKSLVLLkngeaadkpllplpkkaSKILVAgshadnlgyqcggwtitwqglggndltAGSTILHAvsntvdpttqvvfnenpdanfvksnkFSYAIVVVGeqpyaetygdslnltisepglstitNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAawlpgtegqgvaDVLFGDYGFTGKLARTWFktvdqlpmnvgdphydplfpfgfglttkptkgn
MGRFSVPMLGFLLLCFLAAVTEATyikykdpkqplgARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRatgipyvfapCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVgdggttkgineNNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKngeaadkpllplpKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNenpdanfvksnKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPlfpfgfglttkptkgn
MGRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFvagkkkvaacakHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADkpllplpkkASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNvcgavkcvvvvisgrpvvIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPTKGN
****SVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVN****************KSLVLLK*********LPL*KKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLT*******
***FSVPMLGFLLLCFLAAVTEA*********QPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPY*****D*L*LTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTK*****
MGRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPTKGN
*GRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPT***
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SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPTKGN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query628 2.2.26 [Sep-21-2011]
Q23892 821 Lysosomal beta glucosidas yes no 0.891 0.682 0.305 2e-69
Q56078 765 Periplasmic beta-glucosid yes no 0.869 0.713 0.298 4e-59
P33363 765 Periplasmic beta-glucosid N/A no 0.880 0.722 0.287 5e-55
Q5BCC6618 Beta-glucosidase C OS=Eme yes no 0.835 0.849 0.262 1e-39
P14002 755 Thermostable beta-glucosi yes no 0.742 0.617 0.285 2e-38
Q2UFP8638 Probable beta-glucosidase no no 0.839 0.826 0.265 4e-38
B8NGU6634 Probable beta-glucosidase N/A no 0.851 0.843 0.264 1e-36
A5JTQ3 774 Beta-xylosidase/alpha-L-a N/A no 0.832 0.675 0.268 4e-34
Q5B9F2 737 Probable beta-glucosidase no no 0.722 0.616 0.275 1e-33
Q0CEF3 736 Probable beta-glucosidase N/A no 0.719 0.614 0.272 7e-33
>sp|Q23892|GLUA_DICDI Lysosomal beta glucosidase OS=Dictyostelium discoideum GN=gluA PE=1 SV=2 Back     alignment and function desciption
 Score =  264 bits (674), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 196/642 (30%), Positives = 323/642 (50%), Gaps = 82/642 (12%)

Query: 39  IRDLMSRMTLAEKIGQMTQIE-RAVATPDVM-----------KQFFIGSVL----SGGGS 82
           + +LMS+M++ EKIGQMTQ++   + +P+ +           K ++IGS L    SGG +
Sbjct: 80  VDNLMSKMSITEKIGQMTQLDITTLTSPNTITINETTLAYYAKTYYIGSYLNSPVSGGLA 139

Query: 83  VPAPKATAETWVNMVNGLQKGALS-TRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVT 141
                  +  W++M+N +Q   +  +   IPMIYG+D+VHG N V+KAT+FPHN GL  T
Sbjct: 140 GDIHHINSSVWLDMINTIQTIVIEGSPNKIPMIYGLDSVHGANYVHKATLFPHNTGLAAT 199

Query: 142 RDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAM-TEII 200
            +          T+ +  A GIP+VFAP + +   P W R YE++ ED  +   M    +
Sbjct: 200 FNIEHATTAAQITSKDTVAVGIPWVFAPVLGIGVQPLWSRIYETFGEDPYVASMMGAAAV 259

Query: 201 PGLQG-----DLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLS 255
            G QG     D P N+   V            AKHY G    T G +     I    L  
Sbjct: 260 RGFQGGNNSFDGPINAPSAV----------CTAKHYFGYSDPTSGKDRTAAWIPERMLRR 309

Query: 256 IHMPAYYNSIS-KGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDR 314
             +P++  +I+  G  T+M++    NG  MH +++ +T  L+ +L+F G  ++DW+ I++
Sbjct: 310 YFLPSFAEAITGAGAGTIMINSGEVNGVPMHTSYKYLTEVLRGELQFEGVAVTDWQDIEK 369

Query: 315 ITAPPHA--NYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRI 372
           +    H   +   ++   + AGIDM MVP +   F   L + V    +P SR+D +V+RI
Sbjct: 370 LVYFHHTAGSAEEAILQALDAGIDMSMVPLDLS-FPIILAEMVAAGTVPESRLDLSVRRI 428

Query: 373 LRVKFVMGLFDSPL--ADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADKPLLPLPK 430
           L +K+ +GLF +P    + ++V+ +G  + RE A     +S+ LL+N       +LPL  
Sbjct: 429 LNLKYALGLFSNPYPNPNAAIVDTIGQVQDREAAAATAEESITLLQN----KNNILPLNT 484

Query: 431 KASK-ILVAGSHADNLGYQCGGWTITWQG-LGGNDLTAGSTILHAV----SNTVD----- 479
              K +L+ G  AD++    GGW++ WQG    ++   G++IL  +    ++T D     
Sbjct: 485 NTIKNVLLTGPSADSIRNLNGGWSVHWQGAYEDSEFPFGTSILTGLREITNDTADFNIQY 544

Query: 480 --------PTTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLST 531
                   PT Q   +E  +     +      +VV+GE P AET GD  +L++    +  
Sbjct: 545 TIGHEIGVPTNQTSIDEAVEL----AQSSDVVVVVIGELPEAETPGDIYDLSMDPNEVLL 600

Query: 532 ITNVCGAVKCVV-VVISGRPVVIQPYLA-QIDALVAAWLPGTE-GQGVADVLFGDYGFTG 588
           +  +    K VV +++  RP ++ P L     A++ A+LPG+E G+ +A++L G+   +G
Sbjct: 601 LQQLVDTGKPVVLILVEARPRILPPDLVYSCAAVLMAYLPGSEGGKPIANILMGNVNPSG 660

Query: 589 KLARTWFKTVDQLPMNVGDPHYD---------PLFPFGFGLT 621
           +L  T+  T      ++G P+Y          PLF FG GL+
Sbjct: 661 RLPLTYPGTTG----DIGVPYYHKYSENGVTTPLFQFGDGLS 698

Dictyostelium discoideum (taxid: 44689)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 1
>sp|Q56078|BGLX_SALTY Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=bglX PE=3 SV=2 Back     alignment and function description
>sp|P33363|BGLX_ECOLI Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) GN=bglX PE=1 SV=2 Back     alignment and function description
>sp|Q5BCC6|BGLC_EMENI Beta-glucosidase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bglC PE=1 SV=1 Back     alignment and function description
>sp|P14002|BGLB_CLOTH Thermostable beta-glucosidase B OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglB PE=1 SV=2 Back     alignment and function description
>sp|Q2UFP8|BGLC_ASPOR Probable beta-glucosidase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=bglC PE=3 SV=2 Back     alignment and function description
>sp|B8NGU6|BGLC_ASPFN Probable beta-glucosidase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=bglC PE=3 SV=1 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|Q5B9F2|BGLL_EMENI Probable beta-glucosidase L OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bglL PE=3 SV=1 Back     alignment and function description
>sp|Q0CEF3|BGLL_ASPTN Probable beta-glucosidase L OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=bglL PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query628
33391721628 beta-D-glucosidase [Gossypium hirsutum] 1.0 1.0 0.867 0.0
224104953627 predicted protein [Populus trichocarpa] 0.993 0.995 0.848 0.0
255565893632 hydrolase, hydrolyzing O-glycosyl compou 0.996 0.990 0.866 0.0
225436114628 PREDICTED: lysosomal beta glucosidase-li 0.996 0.996 0.843 0.0
225436112629 PREDICTED: lysosomal beta glucosidase-li 0.996 0.995 0.842 0.0
357462137627 Beta-D-glucosidase [Medicago truncatula] 0.996 0.998 0.816 0.0
118486349626 unknown [Populus trichocarpa] 0.993 0.996 0.819 0.0
3201554654 beta-D-glucosidase [Tropaeolum majus] 0.995 0.955 0.817 0.0
225439287627 PREDICTED: lysosomal beta glucosidase-li 0.996 0.998 0.806 0.0
224146016613 predicted protein [Populus trichocarpa] 0.969 0.993 0.824 0.0
>gi|33391721|gb|AAQ17461.1| beta-D-glucosidase [Gossypium hirsutum] Back     alignment and taxonomy information
 Score = 1133 bits (2930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/628 (86%), Positives = 587/628 (93%)

Query: 1   MGRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIER 60
           MG+FS+P LGFLLLC LAA+TEATY+KYKDPKQPLG RI+DLM RMTLAEKIGQMTQIER
Sbjct: 1   MGKFSIPKLGFLLLCCLAALTEATYVKYKDPKQPLGVRIKDLMRRMTLAEKIGQMTQIER 60

Query: 61  AVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAV 120
            VATPD MK +FIGSVLSGGGSVPA KAT ETW+ MVN +QK +LSTRLGIPMIYGIDAV
Sbjct: 61  TVATPDAMKNYFIGSVLSGGGSVPAQKATPETWIEMVNTMQKASLSTRLGIPMIYGIDAV 120

Query: 121 HGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWG 180
           HGHNNVYKATIFPHN+GLGVTRDP LVK+IG+ATALEVRATGIPYVFAPCIAVCRDPRWG
Sbjct: 121 HGHNNVYKATIFPHNIGLGVTRDPNLVKRIGEATALEVRATGIPYVFAPCIAVCRDPRWG 180

Query: 181 RCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKG 240
           RCYESYSEDHKIVQ MTEII GLQG LP +SKKGVPFVAGK KVAACAKHYVGDGGTTKG
Sbjct: 181 RCYESYSEDHKIVQMMTEIITGLQGGLPVHSKKGVPFVAGKNKVAACAKHYVGDGGTTKG 240

Query: 241 INENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLK 300
           INENNTVI+ NGLL IHMPAY+NSI+KGVAT+M SYSSWNGKKMHANH+LVT FLKNKLK
Sbjct: 241 INENNTVISWNGLLGIHMPAYFNSIAKGVATIMTSYSSWNGKKMHANHDLVTDFLKNKLK 300

Query: 301 FRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNII 360
           FRGFVISDW+G+DRIT+PPHANYSYSV+AGV AGIDMVMVP N+ EFIDDLT QVK NII
Sbjct: 301 FRGFVISDWQGLDRITSPPHANYSYSVEAGVGAGIDMVMVPYNFTEFIDDLTYQVKNNII 360

Query: 361 PMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEA 420
           PMSRIDDAVKRILRVKFVMGLF++P+AD SLVN+LGSQEHRELAREAVRKSLVLLKNGE+
Sbjct: 361 PMSRIDDAVKRILRVKFVMGLFENPMADNSLVNQLGSQEHRELAREAVRKSLVLLKNGES 420

Query: 421 ADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDP 480
           ADKPLLPLPKKA+KILVAG+HADNLGYQCGGWTITWQGLGGNDLT G+TIL AV NTVD 
Sbjct: 421 ADKPLLPLPKKATKILVAGTHADNLGYQCGGWTITWQGLGGNDLTTGTTILQAVKNTVDS 480

Query: 481 TTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVK 540
           +TQVV++ENPDA FVKS +FSYAIVVVGE PYAETYGDSLNLTISEPG  TI NVCG+VK
Sbjct: 481 STQVVYSENPDAGFVKSGEFSYAIVVVGEPPYAETYGDSLNLTISEPGPMTIYNVCGSVK 540

Query: 541 CVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQ 600
           CVVVVISGRPVV+QP+++ +DALVAAWLPGTEGQGV+DVLFGDYGFTGKLARTWFKTVDQ
Sbjct: 541 CVVVVISGRPVVVQPFVSSVDALVAAWLPGTEGQGVSDVLFGDYGFTGKLARTWFKTVDQ 600

Query: 601 LPMNVGDPHYDPLFPFGFGLTTKPTKGN 628
           LPMNVGDPHYDPLFPFGFGLTTKPT  N
Sbjct: 601 LPMNVGDPHYDPLFPFGFGLTTKPTHQN 628

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224104953|ref|XP_002313632.1| predicted protein [Populus trichocarpa] gi|222850040|gb|EEE87587.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255565893|ref|XP_002523935.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi|223536782|gb|EEF38422.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225436114|ref|XP_002278363.1| PREDICTED: lysosomal beta glucosidase-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225436112|ref|XP_002278377.1| PREDICTED: lysosomal beta glucosidase-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357462137|ref|XP_003601350.1| Beta-D-glucosidase [Medicago truncatula] gi|355490398|gb|AES71601.1| Beta-D-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|118486349|gb|ABK95015.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|3201554|emb|CAA07070.1| beta-D-glucosidase [Tropaeolum majus] Back     alignment and taxonomy information
>gi|225439287|ref|XP_002266470.1| PREDICTED: lysosomal beta glucosidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224146016|ref|XP_002325849.1| predicted protein [Populus trichocarpa] gi|222862724|gb|EEF00231.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query628
TAIR|locus:2147117624 AT5G20950 [Arabidopsis thalian 0.992 0.998 0.741 2e-253
TAIR|locus:2147102626 AT5G20940 [Arabidopsis thalian 0.976 0.979 0.711 4.8e-236
TAIR|locus:504954860665 AT5G04885 [Arabidopsis thalian 0.990 0.935 0.643 3.7e-222
TAIR|locus:2075621608 AT3G47000 [Arabidopsis thalian 0.961 0.993 0.548 2.7e-178
TAIR|locus:2075636609 AT3G47010 [Arabidopsis thalian 0.961 0.991 0.532 9.1e-171
TAIR|locus:2075571612 AT3G47050 [Arabidopsis thalian 0.947 0.972 0.537 1.2e-168
TAIR|locus:2081605650 AT3G62710 [Arabidopsis thalian 0.804 0.776 0.527 1.5e-138
TIGR_CMR|CPS_3740599 CPS_3740 "putative endoglucana 0.578 0.606 0.439 6.2e-93
UNIPROTKB|Q482D5 759 xarB "Xylosidase/arabinosidase 0.944 0.781 0.313 3.1e-67
TIGR_CMR|CPS_2365 759 CPS_2365 "xylosidase/arabinosi 0.944 0.781 0.313 3.1e-67
TAIR|locus:2147117 AT5G20950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2440 (864.0 bits), Expect = 2.0e-253, P = 2.0e-253
 Identities = 464/626 (74%), Positives = 518/626 (82%)

Query:     1 MGRFSVPMLGFLLLCFLAAVTEATYIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIER 60
             MG  S  +L  +LLC + A  E T +KYKDPKQPLGARIRDLM+RMTL EKIGQM QIER
Sbjct:     1 MGTLS-KVLCLMLLCCIVAAAEGT-LKYKDPKQPLGARIRDLMNRMTLQEKIGQMVQIER 58

Query:    61 AVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAV 120
             +VATP+VMK++FIGSVLSGGGSVP+ KAT ETWVNMVN +QK +LSTRLGIPMIYGIDAV
Sbjct:    59 SVATPEVMKKYFIGSVLSGGGSVPSEKATPETWVNMVNEIQKASLSTRLGIPMIYGIDAV 118

Query:   121 HGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWG 180
             HGHNNVY ATIFPHNVGLGVTRDP LVK+IG ATALEVRATGIPY FAPCIAVCRDPRWG
Sbjct:   119 HGHNNVYGATIFPHNVGLGVTRDPNLVKRIGAATALEVRATGIPYAFAPCIAVCRDPRWG 178

Query:   181 RCYESYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFXXXXXXXXXXXXHYVGDGGTTKG 240
             RCYESYSED++IVQ MTEIIPGLQGDLP   +KGVPF            H+VGDGGT +G
Sbjct:   179 RCYESYSEDYRIVQQMTEIIPGLQGDLPTK-RKGVPFVGGKTKVAACAKHFVGDGGTVRG 237

Query:   241 INENNTVINLNGLLSIHMPAYYNSISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLK 300
             I+ENNTVI+  GL  IHMP YYN+++KGVAT+MVSYS+WNG +MHAN ELVTGFLKNKLK
Sbjct:   238 IDENNTVIDSKGLFGIHMPGYYNAVNKGVATIMVSYSAWNGLRMHANKELVTGFLKNKLK 297

Query:   301 FRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNII 360
             FRGFVISDW+GIDRIT PPH NYSYSV AG+SAGIDM+MVP NY EFID+++ Q++K +I
Sbjct:   298 FRGFVISDWQGIDRITTPPHLNYSYSVYAGISAGIDMIMVPYNYTEFIDEISSQIQKKLI 357

Query:   361 PMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEA 420
             P+SRIDDA+KRILRVKF MGLF+ PLAD S  N+LGS+EHRELAREAVRKSLVLLKNG+ 
Sbjct:   358 PISRIDDALKRILRVKFTMGLFEEPLADLSFANQLGSKEHRELAREAVRKSLVLLKNGKT 417

Query:   421 ADXXXXXXXXXASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDP 480
                        + KILVAG+HADNLGYQCGGWTITWQGL GND T G+TIL AV NTV P
Sbjct:   418 GAKPLLPLPKKSGKILVAGAHADNLGYQCGGWTITWQGLNGNDHTVGTTILAAVKNTVAP 477

Query:   481 TTQVVFNENPDANFVKSNKFSYAIVVVGEQPYAETYGDSLNLTISEPGLSTITNXXXXXX 540
             TTQVV+++NPDANFVKS KF YAIVVVGE PYAE +GD+ NLTIS+PG S I N      
Sbjct:   478 TTQVVYSQNPDANFVKSGKFDYAIVVVGEPPYAEMFGDTTNLTISDPGPSIIGNVCGSVK 537

Query:   541 XXXXXXXXXXXXIQPYLAQIDALVAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQ 600
                         IQPY++ IDALVAAWLPGTEGQGVAD LFGDYGFTGKLARTWFK+V Q
Sbjct:   538 CVVVVVSGRPVVIQPYVSTIDALVAAWLPGTEGQGVADALFGDYGFTGKLARTWFKSVKQ 597

Query:   601 LPMNVGDPHYDPLFPFGFGLTTKPTK 626
             LPMNVGD HYDPL+PFGFGLTTKP K
Sbjct:   598 LPMNVGDRHYDPLYPFGFGLTTKPYK 623
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
TAIR|locus:2147102 AT5G20940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504954860 AT5G04885 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075621 AT3G47000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075636 AT3G47010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075571 AT3G47050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081605 AT3G62710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3740 CPS_3740 "putative endoglucanase A" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
UNIPROTKB|Q482D5 xarB "Xylosidase/arabinosidase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2365 CPS_2365 "xylosidase/arabinosidase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.21LOW CONFIDENCE prediction!
3rd Layer3.2.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_IX0154
hypothetical protein (627 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 2e-91
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 1e-85
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 2e-79
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 4e-49
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 3e-37
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information 
 Score =  284 bits (728), Expect = 2e-91
 Identities = 107/333 (32%), Positives = 162/333 (48%), Gaps = 41/333 (12%)

Query: 47  TLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALS 106
           TL EKIGQ+T         +++ ++ +G V+             +   +++N   + A  
Sbjct: 1   TLEEKIGQLTA-------AELIAKYGVGGVIL-----------WKQLEDLINCAGQAAGV 42

Query: 107 TRLGIPMIYGIDAVHGHNNVY--KATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIP 164
            RLGIP++ G D  HG         T FP  + L  T D  L  ++G A   E RA GI 
Sbjct: 43  PRLGIPLLCGTDGPHGVRQRDGAGFTAFPAGIALAATWDRDLAYEVGVAIGEEARAKGID 102

Query: 165 YVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMT-EIIPGLQGDLPANSKKGVPFVAGKKK 223
            + AP + V RDPRWGR +ES+SED  +  AM    I G+Q                 + 
Sbjct: 103 VILAPVVDVGRDPRWGRNFESFSEDPYLAGAMAAAYIKGIQS----------------QG 146

Query: 224 VAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSISK-GVATVMVSYSSWNGK 282
           V A AKH+ G           ++ I+   L  I++P +  ++ + GV +VM +Y+  NG 
Sbjct: 147 VIATAKHFAGHNEQESHRETPDSDIDERTLREIYLPPFEAAVKEAGVGSVMCAYNKVNGS 206

Query: 283 KMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPN 342
               N  L+TG L+ +  F GFV+SDW G++ I    H   + S  A ++AG+DM M   
Sbjct: 207 PACGNSYLLTGLLREEWGFDGFVVSDWLGMNGI--ADHGGAAESAVAALNAGLDMEMPGE 264

Query: 343 NYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRV 375
                 + LT+ VK   +P  R+DD+V+RILR+
Sbjct: 265 YR-TVGEALTEAVKNGKVPEERLDDSVRRILRL 296

Length = 296
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 628
PRK15098 765 beta-D-glucoside glucohydrolase; Provisional 100.0
PLN03080 779 Probable beta-xylosidase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 100.0
PF05690247 ThiG: Thiazole biosynthesis protein ThiG; InterPro 80.82
>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-115  Score=1001.41  Aligned_cols=556  Identities=30%  Similarity=0.535  Sum_probs=470.9

Q ss_pred             CCCCHHHHHHHHHhhCCHHHHHhcccccccCCC-----chHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhh
Q 006872           31 PKQPLGARIRDLMSRMTLAEKIGQMTQIERAVA-----TPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGAL  105 (628)
Q Consensus        31 ~~~~~~~rv~~ll~~mtleeKigQl~~~~~~~~-----~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~  105 (628)
                      ++.+.++|+++++++||||||||||+++.....     ..++|+++++|||+..        .+++++    +.+|+.+.
T Consensus        30 ~~~~~~~~v~~ll~~MtleEKvgQl~~~~~~~~~~~~~~~~~i~~~~vGgv~n~--------~~~~~~----~~lq~~~~   97 (765)
T PRK15098         30 TPEARDAFVTDLLKKMTLDEKIGQLRLISVGPDNPKEAIREMIKAGQVGAIFNT--------VTRQDI----RAMQDQVM   97 (765)
T ss_pred             CCcCHHHHHHHHHHcCCHHHHHhhhcccccCCCCchHHHHHHHHhCCcceEEcC--------cCHHHH----HHHHHHHh
Confidence            345789999999999999999999998764432     2457899999999732        244544    45666554


Q ss_pred             -ccCCCCCcEEEecCCCCcccCCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCcccc
Q 006872          106 -STRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYE  184 (628)
Q Consensus       106 -~~~~giP~~i~~D~e~G~~~~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~r  184 (628)
                       .++++||+++++|+|||.     .|.||+++++|||||+++++++|+++|+|+|++|||++||||+||.|||+|||++|
T Consensus        98 ~~~~~giP~li~~D~e~G~-----~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gin~~laPv~Dv~r~p~~gr~~r  172 (765)
T PRK15098         98 QLSRLKIPLFFAYDVVHGQ-----RTVFPISLGLASSWDLDAVATVGRVSAYEAADDGLNMTWAPMVDISRDPRWGRASE  172 (765)
T ss_pred             hCCCCCCCeeEEEeCCCCc-----cccCChHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCEEeeCcccccCCCCcccccc
Confidence             478899999999999997     47899999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCHHHHHHHHh-ccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHH
Q 006872          185 SYSEDHKIVQAMTE-IIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYN  263 (628)
Q Consensus       185 sfgeDp~lv~~~a~-~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~  263 (628)
                      ||||||+++++|+. ||+|+|+.+..          +..||++|+|||||||.++.++|.....+++++|++.||+||++
T Consensus       173 sfgeDP~lv~~~~~a~v~GlQ~~~~~----------~~~gV~a~~KHFpG~g~~~~~~~~~~~~~~~~~l~e~~l~PF~~  242 (765)
T PRK15098        173 GFGEDTYLTSIMGKTMVKAMQGKSPA----------DRYSVMTSVKHFALYGAVEGGRDYNTVDMSPQRMFNDYLPPYKA  242 (765)
T ss_pred             CcCCCHHHHHHHHHHHHHHHcCCCCC----------CCCCEEEECcEEeCCCCcccCccCccCcCCHHHHHHHHHHHHHH
Confidence            99999999999997 99999963210          03589999999999999888888777778999999999999999


Q ss_pred             HHHcCcceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCC-CCChhHHHHHHHHcCCCeeccCC
Q 006872          264 SISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPP-HANYSYSVQAGVSAGIDMVMVPN  342 (628)
Q Consensus       264 ~i~~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~-~~~~~~~~~~al~AG~D~~l~~~  342 (628)
                      +|++|+.+|||||+.+||.|+|+|+++|+++||+||||+|+|||||++|.++..++ ..+..+++++|++||+||+|.+.
T Consensus       243 ai~ag~~~VM~sy~~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~a~~~l~~~~~~~~~~ea~~~Al~AG~Dl~m~~~  322 (765)
T PRK15098        243 GLDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITVSDHGAIKELIKHGVAADPEDAVRLALKSGIDMSMSDE  322 (765)
T ss_pred             HHHhCCCEEEecccCcCCEeccCCHHHHHHHHHHhcCCCcEEEecchhHHHHHhcccCCCHHHHHHHHHHcCCCcccCch
Confidence            99999999999999999999999999999999999999999999999999876421 13457889999999999998643


Q ss_pred             ChHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcc------hhhccCCHHHHHHHHHHHHhhhhhhc
Q 006872          343 NYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTS------LVNELGSQEHRELAREAVRKSLVLLK  416 (628)
Q Consensus       343 ~~~~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~------~~~~~~~~~~~~la~~~a~~sivLLK  416 (628)
                      .   +.+.|.+||++|.|+++|||+||+|||++|+++|+|++|+.+..      ....+.+++|+++++++|++||||||
T Consensus       323 ~---~~~~l~~av~~G~i~~~~id~av~RIL~~k~~~glf~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~sivLLK  399 (765)
T PRK15098        323 Y---YSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLK  399 (765)
T ss_pred             h---HHHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHhCCCCCCccccccccccccccccCCHHHHHHHHHHHHhcEEEEe
Confidence            2   34568999999999999999999999999999999999975421      11234678999999999999999999


Q ss_pred             cCCCCCCCcccCCCCCCeEEEEcccCCccCcccCCcEEeecCCCCCCCCCccCHHHHHhcccCCCceEEecCCCC-----
Q 006872          417 NGEAADKPLLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPD-----  491 (628)
Q Consensus       417 N~~~~e~~~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-----  491 (628)
                      |    ++++|||+++ +||+|+|++++.....+|+|+..     +. ..+..|++++|++.+.....+.|..+.+     
T Consensus       400 N----~~~~LPL~~~-~~IaviG~~a~~~~~~~G~~s~~-----~~-~~~~vt~~~gl~~~~~~~~~v~y~~G~~~~~~~  468 (765)
T PRK15098        400 N----RLETLPLKKS-GTIAVVGPLADSQRDVMGSWSAA-----GV-ADQSVTVLQGIKNAVGDKAKVLYAKGANVTDDK  468 (765)
T ss_pred             c----CCCCCCCCCC-CEEEEECCCcccccccCCCcccc-----Cc-cCCCCCHHHHHHHhhcCCceEEEecccccccCc
Confidence            9    6789999864 79999999998876667777521     21 2355799999998775544555543221     


Q ss_pred             --------------------h-----hHHhhcCCceEEEEEeccCCccccC-CCccccCChhhHHHHHHHhc-CCCeEEE
Q 006872          492 --------------------A-----NFVKSNKFSYAIVVVGEQPYAETYG-DSLNLTISEPGLSTITNVCG-AVKCVVV  544 (628)
Q Consensus       492 --------------------~-----~~~~~~~~D~~iv~vg~~~~~e~~g-d~~~l~l~~~~~~li~~v~~-~~~~VvV  544 (628)
                                          .     ....++.+|++||++|.....+.++ ||.++.||..|.+||+++++ ++|+|||
T Consensus       469 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~A~~aD~vIv~vg~~~~~~~E~~Dr~~l~Lp~~Q~~Li~~v~~~~~~vVvV  548 (765)
T PRK15098        469 GIIDFLNQYEEAVKVDPRSPQAMIDEAVQAAKQADVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLV  548 (765)
T ss_pred             ccchhhhccccccccccccchhhHHHHHHHHhcCCEEEEEEcCCCCccccCCCcccccCCHHHHHHHHHHHHhCcCEEEE
Confidence                                0     1122468999999999887666665 99999999999999999987 8899999


Q ss_pred             EECCccccccccccCcceeEEccCCCch-hHHHHHHHhcCCCCCccccccccccCCCCCCCC-----------------C
Q 006872          545 VISGRPVVIQPYLAQIDALVAAWLPGTE-GQGVADVLFGDYGFTGKLARTWFKTVDQLPMNV-----------------G  606 (628)
Q Consensus       545 ~~~g~P~~l~~~~~~v~ail~a~~~g~~-g~a~advL~G~~~PsGkLPvt~p~~~~~~p~~~-----------------g  606 (628)
                      +++|+|+++.++.++++|||++|+||++ |+|+||||||++|||||||+|||++.+++|.++                 +
T Consensus       549 l~~g~P~~l~~~~~~v~AiL~a~~pG~e~G~AiAdvLfG~~nPsGkLPvT~p~~~~~~P~~~~~~~~~~~y~e~~~~~y~  628 (765)
T PRK15098        549 LMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYNHLNTGRPYNPDKPNKYT  628 (765)
T ss_pred             EeCCceeeccchhhcCCeEEeecCCchhhhHHHHHHHcCCCCCCCCCccceeCCCCcCccccccCCCCCccccCcccccc
Confidence            9999999995433589999999999999 999999999999999999999999999998642                 3


Q ss_pred             CCCC----CccccCCCCCCCCCCCC
Q 006872          607 DPHY----DPLFPFGFGLTTKPTKG  627 (628)
Q Consensus       607 ~~~~----~~~~pFG~GLsYt~~~~  627 (628)
                      ||||    +|+||||||||||+|+.
T Consensus       629 yry~d~~~~plypFG~GLSYT~F~y  653 (765)
T PRK15098        629 SRYFDEANGPLYPFGYGLSYTTFTV  653 (765)
T ss_pred             cceeccCCCccccccCCCCCccEEe
Confidence            4666    48999999999999973

>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 0.0
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 0.0
3usz_A 822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 1e-121
3rrx_A 822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 1e-121
2x40_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 3e-21
2x42_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 3e-20
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-16
4i8d_A 714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 3e-14
3zyz_A 713 Crystal Structure Of A Glycoside Hydrolase Family 3 3e-14
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 5e-14
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 5e-05
3bmx_A642 Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis 2e-13
3lk6_A616 Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro 3e-12
4gyj_A648 Crystal Structure Of Mutant (D318n) Bacillus Subtil 3e-12
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 4e-12
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 6e-05
3sql_A535 Crystal Structure Of Glycoside Hydrolase From Synec 3e-08
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure 
Iteration: 1

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/603 (67%), Positives = 468/603 (77%), Gaps = 2/603 (0%)
Query: 25  YIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVP 84
           Y+ YKD  +P+  R+ DL+ RMTLAEKIGQMTQIER VATPDV++  FIGS+LSGGGSVP
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61
Query: 85  APKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDP 144
              ATA+ W +MV+G QK  +STRLGIPMIYGIDAVHG NNVY ATIFPHNVGLG TRDP
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121
Query: 145 ALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQ 204
            LVK+IG+ATALEVRATGI Y FAPCIAVCRDPRWGRCYESYSED +IVQ+MTE+IPGLQ
Sbjct: 122 YLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQ 181
Query: 205 GDLPANSKKGVPFXXXXXXXXXXXXHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNS 264
           GD+P +   G+PF            H+VGDGGT  GINENNT+IN  GL++IHMPAY N+
Sbjct: 182 GDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA 241
Query: 265 ISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYS 324
           + KGV+TVM+SYSSWNG KMHAN +LVTG+LK+ LKF+GFVISDWEGIDRIT P  ++YS
Sbjct: 242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYS 301
Query: 325 YSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDS 384
           YSV+A + AG+DM+MVPN Y++FI  LT  V   +IPMSRIDDAV RILRVKF MGLF++
Sbjct: 302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN 361
Query: 385 PLADTSLVNELGSQEHRELAREAVRKSLVLLKNGE-AADXXXXXXXXXASKILVAGSHAD 443
           P AD ++  +LG QEHR+LAREA RKSLVLLKNG+ + D         A KILVAGSHAD
Sbjct: 362 PYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKKAPKILVAGSHAD 421
Query: 444 NLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYA 503
           NLGYQCGGWTI WQG  G   T G+TIL AV   VDP+T VVF ENPDA FVKS  FSYA
Sbjct: 422 NLGYQCGGWTIEWQGDTGR-TTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYA 480
Query: 504 IVVVGEQPYAETYGDSLNLTISEPGLSTITNXXXXXXXXXXXXXXXXXXIQPYLAQIDAL 563
           IV VGE PY ET GD+LNLTI EPGLST+                    +QP LA  DAL
Sbjct: 481 IVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDAL 540
Query: 564 VAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTK 623
           VAAWLPG+EGQGV D LFGD+GFTG+L RTWFK+VDQLPMNVGD HYDPLF  G+GLTT 
Sbjct: 541 VAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTTN 600
Query: 624 PTK 626
            TK
Sbjct: 601 ATK 603
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 Back     alignment and structure
>pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 Back     alignment and structure
>pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3SQL|A Chain A, Crystal Structure Of Glycoside Hydrolase From Synechococcus Length = 535 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query628
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 0.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 0.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-126
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 4e-82
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 2e-62
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 1e-19
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 2e-54
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 3e-22
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 2e-14
4g6c_A342 Beta-hexosaminidase 1; ssgcid, niaid, structural g 7e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
 Score =  914 bits (2365), Expect = 0.0
 Identities = 439/602 (72%), Positives = 499/602 (82%), Gaps = 2/602 (0%)

Query: 25  YIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVP 84
           Y+ YKD  +P+  R+ DL+ RMTLAEKIGQMTQIER VATPDV++  FIGS+LSGGGSVP
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61

Query: 85  APKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDP 144
              ATA+ W +MV+G QK  +STRLGIPMIYGIDAVHG NNVY ATIFPHNVGLG TRDP
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121

Query: 145 ALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQ 204
            LVK+IG+ATALEVRATGI Y FAPCIAVCRDPRWGRCYESYSED +IVQ+MTE+IPGLQ
Sbjct: 122 YLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQ 181

Query: 205 GDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNS 264
           GD+P +   G+PFVAGK KVAACAKH+VGDGGT  GINENNT+IN  GL++IHMPAY N+
Sbjct: 182 GDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA 241

Query: 265 ISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYS 324
           + KGV+TVM+SYSSWNG KMHAN +LVTG+LK+ LKF+GFVISDWEGIDRIT P  ++YS
Sbjct: 242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYS 301

Query: 325 YSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDS 384
           YSV+A + AG+DM+MVPN Y++FI  LT  V   +IPMSRIDDAV RILRVKF MGLF++
Sbjct: 302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN 361

Query: 385 PLADTSLVNELGSQEHRELAREAVRKSLVLLKN-GEAADKPLLPLPKKASKILVAGSHAD 443
           P AD ++  +LG QEHR+LAREA RKSLVLLKN   + D PLLPLPKKA KILVAGSHAD
Sbjct: 362 PYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKKAPKILVAGSHAD 421

Query: 444 NLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFSYA 503
           NLGYQCGGWTI WQG  G   T G+TIL AV   VDP+T VVF ENPDA FVKS  FSYA
Sbjct: 422 NLGYQCGGWTIEWQGDTGRT-TVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYA 480

Query: 504 IVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDAL 563
           IV VGE PY ET GD+LNLTI EPGLST+  VCG V+C  V+ISGRPVV+QP LA  DAL
Sbjct: 481 IVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDAL 540

Query: 564 VAAWLPGTEGQGVADVLFGDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTK 623
           VAAWLPG+EGQGV D LFGD+GFTG+L RTWFK+VDQLPMNVGD HYDPLF  G+GLTT 
Sbjct: 541 VAAWLPGSEGQGVTDALFGDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTTN 600

Query: 624 PT 625
            T
Sbjct: 601 AT 602
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query628
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
3zyz_A 713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-132  Score=1117.57  Aligned_cols=594  Identities=74%  Similarity=1.229  Sum_probs=542.2

Q ss_pred             CCCCCCCCHHHHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 006872           27 KYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGALS  106 (628)
Q Consensus        27 ~~~~~~~~~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~  106 (628)
                      ||+|++++.++||++|+++||||||||||+++.......+.++++++|||+++++..+.+..+++||+++++.+|+.+..
T Consensus         4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~   83 (602)
T 1x38_A            4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS   83 (602)
T ss_dssp             GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence            89999999999999999999999999999988766667789999999999998877777888999999999999999988


Q ss_pred             cCCCCCcEEEecCCCCcccCCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCcccccc
Q 006872          107 TRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESY  186 (628)
Q Consensus       107 ~~~giP~~i~~D~e~G~~~~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~rsf  186 (628)
                      +|++||+++++|+|||.+.+.++|.||+++++|||||+++++++|+++|+|+|++|||++|||++||.|||+|||++|||
T Consensus        84 ~rlgiP~l~~~D~~~G~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~Gi~~~~aP~vdv~r~p~~GR~~esf  163 (602)
T 1x38_A           84 TRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESY  163 (602)
T ss_dssp             SSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGGSS
T ss_pred             ccCCCCcEEEEcCCCceeCCCCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHcCCCEEeeceeccccCCCcCccccCc
Confidence            99999999999999999877789999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHhccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHHHH
Q 006872          187 SEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNSIS  266 (628)
Q Consensus       187 geDp~lv~~~a~~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~  266 (628)
                      ||||+++++|+.||+|+|++....+..|.+|+.+..||++|+|||||||+++.++|.....+++++|++.||+||+++|+
T Consensus       164 geDP~lv~~~a~~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~  243 (602)
T 1x38_A          164 SEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMD  243 (602)
T ss_dssp             CSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHHHHHHHHHHHHH
Confidence            99999999997799999974322222222333222499999999999999988888777788999999999999999999


Q ss_pred             cCcceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCChHH
Q 006872          267 KGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNYKE  346 (628)
Q Consensus       267 ~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~~~  346 (628)
                      +|+.+|||||+.+||+|+|+|+++|+++||+||||+|+|||||++|+++...++.+..+++++|++||+||+|.|.++..
T Consensus       244 ag~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~~~~~~a~~~al~AG~D~~m~~~~~~~  323 (602)
T 1x38_A          244 KGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQ  323 (602)
T ss_dssp             TTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCHHH
T ss_pred             cCCCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcCCCHHHHHHHHHHcCCCcccCCcchhh
Confidence            99999999999999999999999999999999999999999999999998766656778899999999999999888888


Q ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhccCCHHHHHHHHHHHHhhhhhhccCCCCCC--C
Q 006872          347 FIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKSLVLLKNGEAADK--P  424 (628)
Q Consensus       347 ~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~e~--~  424 (628)
                      +.+.|.+||++|+++++|||+||+|||++|+++|+|++|+.+......+++++|+++++++|++|||||||    ++  +
T Consensus       324 ~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~~p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN----~~~~~  399 (602)
T 1x38_A          324 FISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKSLVLLKN----GKTST  399 (602)
T ss_dssp             HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHHCEEEEE----CSSTT
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCcchhhccCCHHHHHHHHHHHHhceEEecc----CCCCC
Confidence            88999999999999999999999999999999999999987765445789999999999999999999999    55  4


Q ss_pred             ---cccCCCCCCeEEEEcccCCccCcccCCcEEeecCCCCCCCCCccCHHHHHhcccCCCceEEecCCCChhHHhhcCCc
Q 006872          425 ---LLPLPKKASKILVAGSHADNLGYQCGGWTITWQGLGGNDLTAGSTILHAVSNTVDPTTQVVFNENPDANFVKSNKFS  501 (628)
Q Consensus       425 ---~LPL~~~~~ki~vig~~a~~~~~~~g~~~~~~~~~~g~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D  501 (628)
                         +|||+++.+||+|+|++++....++|+|+..|++.++. .....++++++++.+.....+.|..+++.....++++|
T Consensus       400 ~~~~LPL~~~~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~-~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~a~~aD  478 (602)
T 1x38_A          400 DAPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGDTGR-TTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFS  478 (602)
T ss_dssp             SCCCCSCCSCCSEEEEESTTTTCHHHHHCSSSSSTTCCSSC-CSSCBCHHHHHHHHSCTTCEEEEESSCCHHHHHHTTCS
T ss_pred             cccccccCCCCCEEEEEcCCCccccccCCcceeeccCCCCC-CCCcccHHHHHHHHhCCCeEEEEcCCCCHHHHHHhhCC
Confidence               99998756799999999998877899999888876654 35668999999998766678888777765555577899


Q ss_pred             eEEEEEeccCCccccCCCccccCChhhHHHHHHHhcCCCeEEEEECCccccccccccCcceeEEccCCCchhHHHHHHHh
Q 006872          502 YAIVVVGEQPYAETYGDSLNLTISEPGLSTITNVCGAVKCVVVVISGRPVVIQPYLAQIDALVAAWLPGTEGQGVADVLF  581 (628)
Q Consensus       502 ~~iv~vg~~~~~e~~gd~~~l~l~~~~~~li~~v~~~~~~VvV~~~g~P~~l~~~~~~v~ail~a~~~g~~g~a~advL~  581 (628)
                      ++||++|.+++.+.+|||.++.||..|.+||+++++++|+|||+++|+|+.+.+|.++++|||++|+||++++|+|||||
T Consensus       479 ~viv~~g~~~~~e~~gdr~~l~lp~~q~~li~~v~~~~~~VvVl~~g~P~~l~~~~~~~~Ail~a~~pG~~g~AiadvL~  558 (602)
T 1x38_A          479 YAIVAVGEHPYTETKGDNLNLTIPEPGLSTVQAVCGGVRCATVLISGRPVVVQPLLAASDALVAAWLPGSEGQGVTDALF  558 (602)
T ss_dssp             CEEEEEECCCCCGGGGCCSSCCCCSSSHHHHHHHHTTSCEEEEEECSSCCCCHHHHHHCSEEEEEECCCSBTHHHHHHHT
T ss_pred             EEEEEeccCcccccCCCcCCcCCChhHHHHHHHHHhCCCEEEEEeCCCceeccchhhccCeEEeccCCchHHHHHHHHHc
Confidence            99999999888888889999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccccccccccCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 006872          582 GDYGFTGKLARTWFKTVDQLPMNVGDPHYDPLFPFGFGLTTKPT  625 (628)
Q Consensus       582 G~~~PsGkLPvt~p~~~~~~p~~~g~~~~~~~~pFG~GLsYt~~  625 (628)
                      |++||+||||+|||++.+|+|.++||++|+|+||||||||||+.
T Consensus       559 G~~nPsGkLP~t~p~~~~~~p~~~g~~~~~plypFG~GLSYt~~  602 (602)
T 1x38_A          559 GDFGFTGRLPRTWFKSVDQLPMNVGDAHYDPLFRLGYGLTTNAT  602 (602)
T ss_dssp             TSSCCCCCCSSCBCSCGGGCSCCTTCSSCCCSBCTTCCBCCCCC
T ss_pred             CCCCCCccCcccccCccccCCccCCCCCCCccCcCCCCcCCCCC
Confidence            99999999999999999999999999999999999999999974
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 628
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 1e-122
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 4e-61
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 1e-26
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  365 bits (936), Expect = e-122
 Identities = 280/387 (72%), Positives = 327/387 (84%)

Query: 25  YIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVP 84
           Y+ YKD  +P+  R+ DL+ RMTLAEKIGQMTQIER VATPDV++  FIGS+LSGGGSVP
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61

Query: 85  APKATAETWVNMVNGLQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDP 144
              ATA+ W +MV+G QK  +STRLGIPMIYGIDAVHG NNVY ATIFPHNVGLG TRDP
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121

Query: 145 ALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDHKIVQAMTEIIPGLQ 204
            LVK+IG+ATALEVRATGI Y FAPCIAVCRDPRWGRCYESYSED +IVQ+MTE+IPGLQ
Sbjct: 122 YLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQ 181

Query: 205 GDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNS 264
           GD+P +   G+PFVAGK KVAACAKH+VGDGGT  GINENNT+IN  GL++IHMPAY N+
Sbjct: 182 GDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA 241

Query: 265 ISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYS 324
           + KGV+TVM+SYSSWNG KMHAN +LVTG+LK+ LKF+GFVISDWEGIDRIT P  ++YS
Sbjct: 242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYS 301

Query: 325 YSVQAGVSAGIDMVMVPNNYKEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDS 384
           YSV+A + AG+DM+MVPN Y++FI  LT  V   +IPMSRIDDAV RILRVKF MGLF++
Sbjct: 302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN 361

Query: 385 PLADTSLVNELGSQEHRELAREAVRKS 411
           P AD ++  +LG QEHR+LAREA RKS
Sbjct: 362 PYADPAMAEQLGKQEHRDLAREAARKS 388
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query628
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 100.0
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=7.6e-87  Score=714.33  Aligned_cols=387  Identities=72%  Similarity=1.212  Sum_probs=359.6

Q ss_pred             cCCCCCCCCCHHHHHHHHHhhCCHHHHHhcccccccCCCchHHHhhcccceEEeCCCCCCCCCCCHHHHHHHHHHHHHhh
Q 006872           25 YIKYKDPKQPLGARIRDLMSRMTLAEKIGQMTQIERAVATPDVMKQFFIGSVLSGGGSVPAPKATAETWVNMVNGLQKGA  104 (628)
Q Consensus        25 ~~~~~~~~~~~~~rv~~ll~~mtleeKigQl~~~~~~~~~~~~i~~~~iGgv~~~~~~~~~~~~~~~~~~~~~~~lq~~~  104 (628)
                      .+.|+||++|+++||++|+++||||||||||+++.....+.+.++++++|+++++++..++...++.+|+++++.+|+.+
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence            35599999999999999999999999999999998888888999999999999998888888889999999999999999


Q ss_pred             hccCCCCCcEEEecCCCCcccCCCCcCCCccccccccCCHHHHHHHHHHHHHHHHHcCCCeeecccccccCCCCCCcccc
Q 006872          105 LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGVTRDPALVKKIGDATALEVRATGIPYVFAPCIAVCRDPRWGRCYE  184 (628)
Q Consensus       105 ~~~~~giP~~i~~D~e~G~~~~~~~t~fP~~~~laat~d~~la~~~g~~~a~e~~a~Gin~~~aPv~Dv~~~p~~gr~~r  184 (628)
                      ..++++||+++++|+|+|.+.+.+.|.||+++++|+|||+++++++|+.+|+|+|++|||++||||+||.+||+|||+.|
T Consensus        82 ~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~Gin~~~aPv~Dv~~~p~~gr~~e  161 (388)
T d1x38a1          82 MSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGIQYAFAPCIAVCRDPRWGRCYE  161 (388)
T ss_dssp             HTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHTTCCEECCCBCCCCSCTTSTTGGG
T ss_pred             HhccCCCCceeecccccCcccccccccchhhhhccccCCHHHHHHHHHHhhHHHHhcCCccccCCccccccccccccccc
Confidence            88999999999999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCHHHHHHHHhccccccCCCCCCCCCCCccccCCCceeeeecccccCCCCCCCCCCCCccCCHhHHHhhccHHHHHH
Q 006872          185 SYSEDHKIVQAMTEIIPGLQGDLPANSKKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVINLNGLLSIHMPAYYNS  264 (628)
Q Consensus       185 sfgeDp~lv~~~a~~v~G~q~~~~~~~~~~~~~~~g~~gv~~~~KHFpG~g~~~~~~~~~~~~~~~~~l~~~~l~pF~~~  264 (628)
                      +|||||++++.|+.+|+++|+.....+..|.....+++||++|+|||||||++..++|...+.++.++|++.||+||+.+
T Consensus       162 t~geDp~l~~~~~~~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~~i~~~~l~~~~l~pf~~~  241 (388)
T d1x38a1         162 SYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNA  241 (388)
T ss_dssp             SSCSSHHHHHHGGGHHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHH
T ss_pred             CccCCHHHHHHHHhhhhhhhchhhhhhcccccccccccCcceeeeeeecCCccccCccccccchhHHHHHHHhhhhhHHH
Confidence            99999999999976888888765444444443333467999999999999999888888888899999999999999999


Q ss_pred             HHcCcceEEEeccccCCccccCCHHHHHHHHHhhcCCCceeecchhhhhhhcCCCCCChhHHHHHHHHcCCCeeccCCCh
Q 006872          265 ISKGVATVMVSYSSWNGKKMHANHELVTGFLKNKLKFRGFVISDWEGIDRITAPPHANYSYSVQAGVSAGIDMVMVPNNY  344 (628)
Q Consensus       265 i~~g~~~vM~sy~~~~g~pa~~s~~~l~~lLR~elgf~G~visD~~~m~~~~~~~~~~~~~~~~~al~AG~D~~l~~~~~  344 (628)
                      |++|+.+|||+|+.++|+|+|.|+++++++||++|||+|+|||||++|.++...+.....++++.++.||+||+|.+.+.
T Consensus       242 i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~~~~~~~~~~~~~a~~ag~d~~~~~~~~  321 (388)
T d1x38a1         242 MDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKY  321 (388)
T ss_dssp             HHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCH
T ss_pred             HhhccccccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhccccccccCCcHHHHHHHHHhcCCCeecCCccH
Confidence            99999999999999999999999999999999999999999999999999988766666678889999999999999888


Q ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcchhhccCCHHHHHHHHHHHHhh
Q 006872          345 KEFIDDLTDQVKKNIIPMSRIDDAVKRILRVKFVMGLFDSPLADTSLVNELGSQEHRELAREAVRKS  411 (628)
Q Consensus       345 ~~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~gl~~~p~~~~~~~~~~~~~~~~~la~~~a~~s  411 (628)
                      ..+++.|.+||++|+|+++|||+||+|||++|+++||||+|+.++.....+++++|+++|+++|+||
T Consensus       322 ~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~p~~~~~~~~~i~~~~h~~~a~~aA~~S  388 (388)
T d1x38a1         322 QQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS  388 (388)
T ss_dssp             HHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTCCSCCGGGGGGTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCChhhhhhcCCHHHHHHHHHHHhcC
Confidence            8899999999999999999999999999999999999999998876667789999999999999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure