Citrus Sinensis ID: 006946


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620----
MGGQCSKGSSKADKNNTRRSISLKSNGLQNHKLNPSPSPLEQQHKGFSSLPKPQSDDFYDGIPRFDGGLSQKSKSVRSTQAAVAKVSEVSARLGRAGTVGLGKAVDVLDTLGSSMTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREPSTFPPLTSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDRLSKSSGQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHccccccc
cccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccHcHHcHHHHHHHHHHcccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHccccHHHHHHHHHHHHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHccccccccccccccccccccccccccccccEEEccccHHHHHHHHccccccc
mggqcskgsskadknntrrsislksnglqnhklnpspspleqqhkgfsslpkpqsddfydgiprfdgglsqksksVRSTQAAVAKVSEVSARlgragtvglGKAVDVLDTLgssmtnlnpnngfsgvgtksnELSILAFEVANTIVKGSNLMLSISESSVRQLKEVvlpaegvqnlVSKDMDELLKIFAAdkrddlkiftgevvrfgnrskdpqwhnlGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQhkrqeednpvgsqkgESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHdafgstddhfpfkgsmsnhqrlgpaGLALHYANIILQIDSLvarsssmppstrdalyqslppSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIAtntakahhgfgwvgewanlgsdlnrkpagptdviRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAikypvgtsiqktnkhtkrepstfppltsEEQELLQKVALRnrvpgisksldfdKIRLKRYdrlskssgqspqrgskelattkrlpshvpiigfgiekekaldvidrvdvlr
mggqcskgsskadknntrrsislksnglqnhKLNPSPSPLEQQHKGFSSLPKPQSDDFYDGIPRFdgglsqksksvRSTQAAVAKVSevsarlgragtvglgKAVDVLDTLGSSMTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLpaegvqnlvsKDMDELLKIFaadkrddlkiftgevvrfgnrskdpqwhnLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRqeednpvgsqkgeSFAILRAELKsqrkqvkilrkkslwsrsLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGtsiqktnkhtkrepstfppltsEEQELLQKValrnrvpgisksldfdkirlkrydrlskssgqspqrgskelattkrlpshvpiigfgiekekaldvidrvdvlr
MGGQCSKGSSKADKNNTRRSISLKSNGLQNHKLNPSPSPLEQQHKGFSSLPKPQSDDFYDGIPRFDGGLSQKSKSVRSTQAAVAKVSEVSARLGRAGTVGLGKAVDVLDTLGSSMTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREPSTFPPLTSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDRLSKSSGQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
*******************************************************************************************RLGRAGTVGLGKAVDVLDTLGS**********FSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFE***********************************VKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKG****HQRLGPAGLALHYANIILQIDSLV*******************************SFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVG*********************************************F**********************************HVPIIGFGIEKEKALDVIDRV****
***********************************************************************************************AGTVGLGKAVDVLDTLG***********************ILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQD****************************SQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTD********************ALHYANIILQIDSL**********TRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGE******************IRLETLYHADKEKTEAYILDLLLWLHQLVN********************************************QELLQKVAL**************************************************IIGFGIEKEKALDVIDRVDVL*
****************TRRSISLKSNGLQNHKLNPS***************KPQSDDFYDGIPRFDGGL******************EVSARLGRAGTVGLGKAVDVLDTLGSSMTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDC**************KGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVAR**********ALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSI*****************TSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDR*****************TTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
**************************************************************************************************VGLGKAVDVLDTLG******************SNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEE********GESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTD*************RLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSD*****AGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFG**********************************LTSEEQELLQKVALRNRVP*****************************************SHVPIIGFGIEKEKALDVIDRVDV**
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MGGQCSKGSSKADKNNTRRSISLKSNGLQNHKLNPSPSPLEQQHKGFSSLPKPQSDDFYDGIPRFDGGLSQKSKSVRSTQAAVAKVSEVSARLGRAGTVGLGKAVDVLDTLGSSMTNLNPNNGFSGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKISRELIPxxxxxxxxxxxxxxxxxxxxxTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKGESxxxxxxxxxxxxxxxxxxxxxSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDHFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPAGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQKTNKHTKREPSTFPPLTSEEQELLQKVALRNRVPGISKSLDFDKIRLKRYDRLSKSSGQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query624
255586811637 conserved hypothetical protein [Ricinus 0.985 0.965 0.618 0.0
297735822653 unnamed protein product [Vitis vinifera] 0.950 0.908 0.644 0.0
224135475649 predicted protein [Populus trichocarpa] 0.907 0.872 0.656 0.0
356574581662 PREDICTED: uncharacterized protein LOC10 0.900 0.848 0.660 0.0
225463926655 PREDICTED: uncharacterized protein LOC10 0.950 0.905 0.642 0.0
356533999667 PREDICTED: uncharacterized protein LOC10 0.900 0.842 0.660 0.0
296082638568 unnamed protein product [Vitis vinifera] 0.900 0.989 0.646 0.0
449443881652 PREDICTED: uncharacterized protein LOC10 0.988 0.946 0.591 0.0
15218580657 uncharacterized protein [Arabidopsis tha 0.985 0.936 0.591 0.0
297846428662 hypothetical protein ARALYDRAFT_473586 [ 0.993 0.936 0.591 0.0
>gi|255586811|ref|XP_002534019.1| conserved hypothetical protein [Ricinus communis] gi|223525970|gb|EEF28360.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/644 (61%), Positives = 492/644 (76%), Gaps = 29/644 (4%)

Query: 1   MGGQCSKGSS----------KADKNNTRRSISLKSNGLQNHKLNPSPSPL-----EQQHK 45
           MGG CS+ S+            + +    S+  +S  L+ +  N +PSP+      +Q +
Sbjct: 1   MGGLCSRSSTVDNAPGGGFPHLNGHFNGSSLVYQSRELKINS-NTTPSPVVENVENKQVR 59

Query: 46  GFSSLPKP-QSDDFYDGIPRFDGGLSQKSKSVRSTQAAVAKVSEVSARLGRAGTVGLGKA 104
              S P     DDF +GIP        ++KS RST++  AKVSEVS+ LGRAGTVGL KA
Sbjct: 60  EPLSFPDGINPDDFNEGIPHL-----SRNKS-RSTKSKQAKVSEVSSLLGRAGTVGLDKA 113

Query: 105 VDVLDTLGSSMTNLNPNNGF-SGVGTKSNELSILAFEVANTIVKGSNLMLSISESSVRQL 163
           V+VLDTLGSSMTNLN ++GF SGV TK N++SILAFEVANTIVKG+NLM S+S+ + + L
Sbjct: 114 VEVLDTLGSSMTNLNLSSGFTSGVTTKGNKISILAFEVANTIVKGANLMQSLSKENTKHL 173

Query: 164 KEVVLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFE 223
           KEVVLP+EGVQNL+S+DMDELL+I AADKR++LK+F+GEVVRFGNR KDPQWHNL RYFE
Sbjct: 174 KEVVLPSEGVQNLISRDMDELLRIAAADKREELKVFSGEVVRFGNRCKDPQWHNLDRYFE 233

Query: 224 KISRELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGS 283
           K+  EL P+KQLK+EAE++M+QLM LVQ+TAELY+E+  LDRFEQD + K QE+D+  G 
Sbjct: 234 KLGSELTPEKQLKEEAEIVMKQLMNLVQYTAELYHEMHALDRFEQDYRRKLQEDDSSNGP 293

Query: 284 QKGESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDD 343
           Q+G+S AILRAELKSQRK VK L+KKSLWS+ LEEVMEKLVDIV FL LE+H+AFGS D 
Sbjct: 294 QRGDSLAILRAELKSQRKHVKSLKKKSLWSKILEEVMEKLVDIVHFLHLEIHEAFGSADG 353

Query: 344 HFPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSAL 403
             P KGS  +H++LG AGLALHYANII QID+LV+RSSS+PP+TRDALYQ LPPSIKSAL
Sbjct: 354 DRPVKGSSISHKKLGSAGLALHYANIITQIDTLVSRSSSVPPNTRDALYQGLPPSIKSAL 413

Query: 404 RSKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKP 463
           R KLQS HVKEE TVAQIK EME+TLQWLVPIATNT KAHHGFGWVGEWAN GS++NRKP
Sbjct: 414 RCKLQSLHVKEELTVAQIKAEMEQTLQWLVPIATNTTKAHHGFGWVGEWANTGSEVNRKP 473

Query: 464 AGPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQ 523
            G TD++R+ETL+HADKEKTE YILDL++ LH LV++AR     GG++S +K P+ +  Q
Sbjct: 474 TGQTDLLRIETLHHADKEKTETYILDLVVRLHHLVSQAR--ATNGGIRSPVKSPIRSPNQ 531

Query: 524 KTNKHTKREPST-FPPLTSEEQELLQKVALRNRVPGISKSLDFD--KIRLKRYDRLSKSS 580
           KT + +  +PS+  P LT E+QE+L+ V  R + PGISKS +FD  K RL ++ RLSKSS
Sbjct: 532 KTIQLSTHKPSSPLPMLTVEDQEMLRDVPKRKKTPGISKSQEFDTAKTRLCKHHRLSKSS 591

Query: 581 GQSPQRGSKELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR 624
             SP   +K+     R PS VP+I F I++ KALDVIDRVD +R
Sbjct: 592 SHSPMTETKKDPFPIRRPSSVPVIDFDIDRIKALDVIDRVDTIR 635




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735822|emb|CBI18542.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224135475|ref|XP_002327227.1| predicted protein [Populus trichocarpa] gi|222835597|gb|EEE74032.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356574581|ref|XP_003555424.1| PREDICTED: uncharacterized protein LOC100811297 [Glycine max] Back     alignment and taxonomy information
>gi|225463926|ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263351 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356533999|ref|XP_003535545.1| PREDICTED: uncharacterized protein LOC100812676 [Glycine max] Back     alignment and taxonomy information
>gi|296082638|emb|CBI21643.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443881|ref|XP_004139704.1| PREDICTED: uncharacterized protein LOC101220504 [Cucumis sativus] gi|449516605|ref|XP_004165337.1| PREDICTED: uncharacterized protein LOC101226834 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15218580|ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] gi|37202044|gb|AAQ89637.1| At1g34320 [Arabidopsis thaliana] gi|51970944|dbj|BAD44164.1| hypothetical protein [Arabidopsis thaliana] gi|51971088|dbj|BAD44236.1| hypothetical protein [Arabidopsis thaliana] gi|332193576|gb|AEE31697.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297846428|ref|XP_002891095.1| hypothetical protein ARALYDRAFT_473586 [Arabidopsis lyrata subsp. lyrata] gi|297336937|gb|EFH67354.1| hypothetical protein ARALYDRAFT_473586 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query624
TAIR|locus:2026135657 AT1G34320 [Arabidopsis thalian 0.916 0.870 0.636 2.1e-187
TAIR|locus:504956337649 AT5G08660 "AT5G08660" [Arabido 0.910 0.875 0.599 5.4e-173
TAIR|locus:505006158615 AT1G30755 [Arabidopsis thalian 0.919 0.933 0.416 2.4e-108
TAIR|locus:2086218531 AT3G23160 "AT3G23160" [Arabido 0.350 0.412 0.293 9.6e-33
TAIR|locus:2151451474 AT5G51670 [Arabidopsis thalian 0.216 0.284 0.328 4.8e-24
TAIR|locus:2184417599 AT5G04550 "AT5G04550" [Arabido 0.216 0.225 0.329 5e-09
TAIR|locus:2026135 AT1G34320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1817 (644.7 bits), Expect = 2.1e-187, P = 2.1e-187
 Identities = 376/591 (63%), Positives = 461/591 (78%)

Query:    48 SSLPKPQSDDFYDGIPRFDGGLSQKSKSVRSTQAAVAKVSEVSARLGRAGTVGLGKAVDV 107
             SS   PQ+ +  DGIPR    LSQKS+S +S QAAVAKVSEVS+ LGRAGT+GLGKAVDV
Sbjct:    70 SSGSHPQNIE--DGIPRLSRVLSQKSRSTKSRQAAVAKVSEVSSLLGRAGTMGLGKAVDV 127

Query:   108 LDTLGSSMTNLNPNNGFSGVGT-KSNELSILAFEVANTIVKGSNLMLSISESSVRQLKEV 166
             LDTLGSSMTNLN + GFS   T K N++SIL+FEVANTIVKG+NLM S+S+ S+  LKEV
Sbjct:   128 LDTLGSSMTNLNLSGGFSSATTVKGNKISILSFEVANTIVKGANLMHSLSKDSITHLKEV 187

Query:   167 VLPAEGVQNLVSKDMDELLKIFAADKRDDLKIFTGEVVRFGNRSKDPQWHNLGRYFEKIS 226
             VLP+EGVQNL+SKDMDELL+I AADKR++L+IF+GEVVRFGNR KDPQ+HNL R+F+++ 
Sbjct:   188 VLPSEGVQNLISKDMDELLRIAAADKREELRIFSGEVVRFGNRCKDPQYHNLDRFFDRLG 247

Query:   227 RELIPQKQLKQEAELLMEQLMTLVQHTAELYNELQILDRFEQDCQHKRQEEDNPVGSQKG 286
              E  PQK LKQEAE +M Q+M+ V  TA+LY+EL  LDRFEQD Q K QEE+NP  +Q+G
Sbjct:   248 SEFTPQKHLKQEAETIMHQMMSFVHFTADLYHELHALDRFEQDYQRKIQEEENPSTAQRG 307

Query:   287 --ESFAILRAELKSQRKQVKILRKKSLWSRSLEEVMEKLVDIVTFLLLEMHDAFGSTDDH 344
               ++ AILR ELKSQ+K V+ L+KKSLWSR LEEVMEKLVD+V FL LE+H+AFG  D  
Sbjct:   308 VGDTLAILRTELKSQKKHVRNLKKKSLWSRILEEVMEKLVDVVHFLHLEIHEAFGGADPD 367

Query:   345 FPFKGSMSNHQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALR 404
              P      NH++LG AGLALHYANII QID+LV+RSS+MP STRDALYQ LPPSIKSALR
Sbjct:   368 KPANDPPINHKKLGSAGLALHYANIITQIDTLVSRSSTMPASTRDALYQGLPPSIKSALR 427

Query:   405 SKLQSFHVKEEFTVAQIKDEMEKTLQWLVPIATNTAKAHHGFGWVGEWANLGSDLNRKPA 464
             S++QSF VKEE TV QIK EMEKTLQWLVP+ATNT KAHHGFGWVGEWA+ GS+ N++PA
Sbjct:   428 SRIQSFQVKEELTVPQIKAEMEKTLQWLVPVATNTTKAHHGFGWVGEWASSGSEANQRPA 487

Query:   465 GPTDVIRLETLYHADKEKTEAYILDLLLWLHQLVNKARFGVIGGGMKSAIKYPVGTSIQK 524
             G T ++R++TL+HADKEKTEAYILDL++WLH LV + R    G G++S +K P+ +  QK
Sbjct:   488 GQT-ILRIDTLHHADKEKTEAYILDLVVWLHHLVTQVR-ATTGYGLRSPVKSPIRSPNQK 545

Query:   525 TNKHTK--REPST-FPPLTSEEQELLQKVALRNRVPGISKSLDFD---KIRLKRYDRLSK 578
             T + +     PS   P LT+E+QE+L+ V+ R + PGISKS +F+   K RL ++ RLSK
Sbjct:   546 TIQLSSGSHNPSMGLPLLTTEDQEMLRDVSKRRKTPGISKSQEFETVAKARLCKHHRLSK 605

Query:   579 SSGQSPQRGS-----KELATTKRLPSHVPIIGFGIEKEKALDVIDRVDVLR 624
             SS  SP  G      K+  +T+R PS VPII F I++ KALDVIDRVD +R
Sbjct:   606 SSSHSPMMGEMMKNKKDTFSTRR-PSSVPIIDFDIDRMKALDVIDRVDTIR 655




GO:0009507 "chloroplast" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:504956337 AT5G08660 "AT5G08660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006158 AT1G30755 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086218 AT3G23160 "AT3G23160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151451 AT5G51670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184417 AT5G04550 "AT5G04550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query624
pfam0500387 pfam05003, DUF668, Protein of unknown function (DU 1e-35
pfam1196157 pfam11961, DUF3475, Domain of unknown function (DU 2e-19
>gnl|CDD|218374 pfam05003, DUF668, Protein of unknown function (DUF668) Back     alignment and domain information
 Score =  128 bits (323), Expect = 1e-35
 Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 1/87 (1%)

Query: 356 RLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHV-KE 414
            LG AGLALHYAN+I+QI+ L +   S+P   RD LYQ LP +I++ALRSKL+ +    +
Sbjct: 1   TLGGAGLALHYANVIIQIEKLASVPHSVPLEARDDLYQMLPATIRAALRSKLKPYLKDYD 60

Query: 415 EFTVAQIKDEMEKTLQWLVPIATNTAK 441
           E    + KD M++ L+WL P+A NT +
Sbjct: 61  EGLATEWKDAMDRILEWLAPMAHNTIR 87


Uncharacterized plant protein. Length = 87

>gnl|CDD|192898 pfam11961, DUF3475, Domain of unknown function (DUF3475) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 624
PF0500389 DUF668: Protein of unknown function (DUF668); Inte 100.0
PF1196157 DUF3475: Domain of unknown function (DUF3475); Int 99.93
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=8.7e-44  Score=308.48  Aligned_cols=86  Identities=63%  Similarity=1.001  Sum_probs=85.1

Q ss_pred             CcchhhhhhhhHHHHHHHHHHhhcCCCCCCchHHHhhhcCchhHHHHHhhcccccccc---chhhHHHHHHHHHHhhhhh
Q 006946          356 RLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIKSALRSKLQSFHVK---EEFTVAQIKDEMEKTLQWL  432 (624)
Q Consensus       356 TLG~AgLALHYANIIi~IEklvs~p~~v~~~aRD~LYqmLP~sIRsaLRskLr~~~~~---de~la~ewk~amekiL~WL  432 (624)
                      |||+|||||||||||+|||+|+++|++||+|+||+||||||++||++||+|||++++.   |+.+++|||++|+|||+||
T Consensus         1 tLG~AgLALhYANvI~~ie~l~~~p~~v~~~aRD~LY~mLP~~ir~aLr~kL~~~~~~~~~d~~~a~~~~~~m~kiL~WL   80 (89)
T PF05003_consen    1 TLGGAGLALHYANVIIQIEKLVSRPSSVPPNARDDLYQMLPPSIRSALRSKLRSYWKKAIYDELLAAEWKDAMEKILEWL   80 (89)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHcCcccCCchHHHHHHhhCcHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999999   9999999999999999999


Q ss_pred             hhhhhhhhh
Q 006946          433 VPIATNTAK  441 (624)
Q Consensus       433 aPmAhNTir  441 (624)
                      +||||||+|
T Consensus        81 ~P~A~nt~r   89 (89)
T PF05003_consen   81 APMAHNTIR   89 (89)
T ss_pred             HHHHHhccC
Confidence            999999997



>PF11961 DUF3475: Domain of unknown function (DUF3475); InterPro: IPR021864 This presumed domain is functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query624
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-13
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 71.4 bits (174), Expect = 6e-13
 Identities = 70/563 (12%), Positives = 159/563 (28%), Gaps = 138/563 (24%)

Query: 38  SPLEQQHKGFSSLPKP---QSDDFYDGIPRFDGGLSQKSKSVRSTQAAVAKVSEVSARLG 94
           SP++ + +  S + +    Q D  Y+    F      + +     + A+ ++   +  + 
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL-RPAKNVL 154

Query: 95  RAGTVGLGKAVDVLDTLGS-SMTNLNPNNGF-SGVGTKSNELSILAFEVANTIVKGSNLM 152
             G +G GK    LD   S  +        F   +   ++  ++L             L+
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE--------MLQKLL 206

Query: 153 LSIS---ESSVRQLKEVVLPAEGVQN-----LVSKDMDELLKIFAADKRDD------LKI 198
             I     S       + L    +Q      L SK  +  L +       +         
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAWNA 261

Query: 199 FTG--------------EVVRFGNRSKDPQWHNLGRYFEKISREL------IPQKQLKQE 238
           F                + +     +     H+         + L         + L +E
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 239 AELLMEQLMTLVQHTAELYNELQILDRFEQ-DCQHKRQ------EEDNPVGSQKG-ESFA 290
                 + ++++     + + L   D ++  +C               P   +K  +  +
Sbjct: 322 VLTTNPRRLSII--AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 291 ILRAELKSQRKQVKILRK--KSLWSRSLEEVMEKLVD-IVTFLLLEMHDAFGST---DDH 344
           +             I       +W   ++  +  +V+ +  + L+E      +      +
Sbjct: 380 VF-------PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432

Query: 345 FPFKGSMSN----HQRLGPAGLALHYANIILQIDSLVARSSSMPPSTRDALYQSLPPSIK 400
              K  + N    H+ +    +  HY NI    DS       +PP      Y  +     
Sbjct: 433 LELKVKLENEYALHRSI----VD-HY-NIPKTFDS----DDLIPPYLDQYFYSHI----- 477

Query: 401 SALRSKLQSFHVKEEFTVAQIKDEMEKT---LQWLVPIATNTAK-AHHGFGW--VGEWAN 454
                     H+K      +            ++L        K  H    W   G   N
Sbjct: 478 --------GHHLK-NIEHPERMTLFRMVFLDFRFL------EQKIRHDSTAWNASGSILN 522

Query: 455 LGSDLN--RKPAGPTDVIRLETLYHADKEKT-EAYILDLLLWLHQL---VNKARFGVIGG 508
               L   +              Y  D +   E  +  +L +L ++   +  +++  +  
Sbjct: 523 TLQQLKFYKP-------------YICDNDPKYERLVNAILDFLPKIEENLICSKYTDL-- 567

Query: 509 GMKSAIKYPVGTSIQKTNKHTKR 531
            ++ A+        ++ +K  +R
Sbjct: 568 -LRIALMAEDEAIFEEAHKQVQR 589


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00