Citrus Sinensis ID: 006970
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 623 | ||||||
| 225432636 | 674 | PREDICTED: primary amine oxidase [Vitis | 0.967 | 0.894 | 0.62 | 0.0 | |
| 225432632 | 667 | PREDICTED: primary amine oxidase [Vitis | 0.964 | 0.901 | 0.598 | 0.0 | |
| 147794975 | 644 | hypothetical protein VITISV_029120 [Viti | 0.963 | 0.931 | 0.617 | 0.0 | |
| 357444253 | 675 | Primary amine oxidase [Medicago truncatu | 0.988 | 0.912 | 0.578 | 0.0 | |
| 147806124 | 654 | hypothetical protein VITISV_012123 [Viti | 0.964 | 0.918 | 0.604 | 0.0 | |
| 356574406 | 677 | PREDICTED: primary amine oxidase-like [G | 0.988 | 0.909 | 0.569 | 0.0 | |
| 356574404 | 1162 | PREDICTED: primary amine oxidase-like [G | 0.963 | 0.516 | 0.576 | 0.0 | |
| 356575837 | 675 | PREDICTED: primary amine oxidase-like [G | 0.964 | 0.890 | 0.570 | 0.0 | |
| 255551463 | 666 | Amine oxidase [copper-containing] precur | 0.951 | 0.890 | 0.579 | 0.0 | |
| 224102055 | 668 | predicted protein [Populus trichocarpa] | 0.974 | 0.908 | 0.539 | 0.0 |
| >gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/650 (62%), Positives = 482/650 (74%), Gaps = 47/650 (7%)
Query: 19 SKRHPLDSLRPSEFTRVQTIVKTSYP--SNNLSFHYVGMDEPDKAVVYSWLSNSKTKF-- 74
S HPLDSL PSEF +VQ IV S P S+N++F YVG+DEPDK + SWLSN +
Sbjct: 25 SHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTLP 84
Query: 75 -PRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFK 133
PRRA VI R + QTHEIIVDLS +SIVSDKVY+GHG+PLLT EEQ A + L L Y PF
Sbjct: 85 PPRRAFVITRLHSQTHEIIVDLSTQSIVSDKVYSGHGYPLLTSEEQTAASELPLTYPPFI 144
Query: 134 ASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQGTINMFLRPIEGITIVVDI 193
AS++KR L +SDVVCS TVGW+GE+KS+RVLK CFYTD GT N+++RPIEG+TIVVD+
Sbjct: 145 ASIRKRKLKLSDVVCSTFTVGWFGEEKSRRVLKILCFYTD-GTANLYMRPIEGVTIVVDL 203
Query: 194 EEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVAT-SSTRPGFKINGNTVKWA 252
+EMK+TEY+DR P+P+ E TEYRLSK KPPFGPRLN V++ PGFKI+G+ ++WA
Sbjct: 204 DEMKITEYHDRLTVPMPEAEGTEYRLSKQKPPFGPRLNGVSSMQPDGPGFKIDGHNIRWA 263
Query: 253 NWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSE---------- 302
NW F+V FDAR G IIS ASIYD+ +RRVLYRG++SELF+PY DP+E
Sbjct: 264 NWDFHVSFDARAGLIISLASIYDLQKRTFRRVLYRGYLSELFVPYMDPTEEWYYKTFFDL 323
Query: 303 -----------------------------GCQDGTPVKTPNAVCIFERHAGDVMWRHTEA 333
QDG PVK NA CIFE+ AG +MWRHTE
Sbjct: 324 GEFGFGLCTVPLQPLADCPSNAVFMDGYYAGQDGKPVKISNAFCIFEQQAGRIMWRHTEV 383
Query: 334 EMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTY 392
E+PG +REVRPEVSLVVRMVATVGNYDYI+DWEFKPSGSIK+GVGL+G+LEVK V YT+
Sbjct: 384 EIPGEEIREVRPEVSLVVRMVATVGNYDYILDWEFKPSGSIKLGVGLTGILEVKGVSYTH 443
Query: 393 VDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKS 452
QIKED +GTL+A N+I +NHDHFL Y+LDLD+DG ANSF K L T+R + +PRKS
Sbjct: 444 TSQIKEDVYGTLLAHNTIGVNHDHFLTYHLDLDVDGDANSFVKANLETKRVKDNISPRKS 503
Query: 453 YWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDY 512
YWTV ETAKTE +A++ L KP E +VNP+KKTK+G+ VGYRL+PGS+ P+L +DDY
Sbjct: 504 YWTVVSETAKTESDAQIQLGLKPAELIVVNPNKKTKLGNYVGYRLIPGSLSSPLLSDDDY 563
Query: 513 PQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMG 572
PQIR FT Y+VW+TPY KSEK++GG Y+DQS GDDTL W+ NREIEN DIVLWYT+G
Sbjct: 564 PQIRGAFTKYDVWITPYNKSEKWAGGLYMDQSRGDDTLAVWSQRNREIENKDIVLWYTIG 623
Query: 573 IHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNYTGK 622
HH PCQEDFPVMPT+S GFELRPTNFFE NPVLK PP + PN T K
Sbjct: 624 FHHVPCQEDFPVMPTLSGGFELRPTNFFERNPVLKTKPPTYGHWPNCTTK 673
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357444253|ref|XP_003592404.1| Primary amine oxidase [Medicago truncatula] gi|355481452|gb|AES62655.1| Primary amine oxidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|147806124|emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356574406|ref|XP_003555339.1| PREDICTED: primary amine oxidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356574404|ref|XP_003555338.1| PREDICTED: primary amine oxidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356575837|ref|XP_003556043.1| PREDICTED: primary amine oxidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255551463|ref|XP_002516777.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543865|gb|EEF45391.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224102055|ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 623 | ||||||
| TAIR|locus:2028606 | 681 | AT1G31710 [Arabidopsis thalian | 0.512 | 0.468 | 0.637 | 8.6e-197 | |
| TAIR|locus:2028636 | 677 | AT1G31690 [Arabidopsis thalian | 0.512 | 0.471 | 0.655 | 3.7e-196 | |
| TAIR|locus:2028666 | 741 | AT1G31670 [Arabidopsis thalian | 0.499 | 0.419 | 0.612 | 2.8e-187 | |
| UNIPROTKB|Q43077 | 674 | Q43077 "Primary amine oxidase" | 0.499 | 0.461 | 0.581 | 7.6e-185 | |
| TAIR|locus:2129520 | 650 | AO1 "amine oxidase 1" [Arabido | 0.483 | 0.463 | 0.578 | 1e-165 | |
| TAIR|locus:2026267 | 712 | CuAO1 "COPPER AMINE OXIDASE1" | 0.504 | 0.441 | 0.510 | 3.3e-145 | |
| TAIR|locus:2139069 | 741 | AT4G12290 [Arabidopsis thalian | 0.504 | 0.423 | 0.507 | 3.1e-140 | |
| TAIR|locus:2080173 | 687 | AT3G43670 [Arabidopsis thalian | 0.504 | 0.457 | 0.501 | 5.8e-137 | |
| UNIPROTKB|P46883 | 757 | tynA "TynA" [Escherichia coli | 0.471 | 0.388 | 0.359 | 3.1e-77 | |
| TAIR|locus:2139054 | 300 | AT4G12280 [Arabidopsis thalian | 0.436 | 0.906 | 0.503 | 9e-77 |
| TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1118 (398.6 bits), Expect = 8.6e-197, Sum P(2) = 8.6e-197
Identities = 206/323 (63%), Positives = 251/323 (77%)
Query: 305 QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPG-HVREVRPEVSLVVRMVATVGNYDYII 363
QDGTP K P +CIFE++AGD+MWRHTEAE+P + EVRP+VSLV R+V TVGNYDYI+
Sbjct: 358 QDGTPAKIPKVMCIFEKYAGDIMWRHTEAEIPNLEITEVRPDVSLVARIVTTVGNYDYIV 417
Query: 364 DWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIK--EDQHGTLVADNSIAINHDHFLNYY 421
D+EFKPSGSIKMGVGL+GVLEVKPVEY + +IK ED HGT+VADN++ +NHDHF+ +
Sbjct: 418 DYEFKPSGSIKMGVGLTGVLEVKPVEYIHTSEIKLGEDIHGTIVADNTVGVNHDHFVTFR 477
Query: 422 LDLDIDGYANSFEKTKLVTRRNT-NVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFAL 480
L LDIDG NSF + +LVT R+ +VNTPRK+YWT + +TAKTE EAR+ L K E +
Sbjct: 478 LHLDIDGTENSFVRNELVTTRSPKSVNTPRKTYWTTKPKTAKTEAEARVKLGLKAEELVV 537
Query: 481 VNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNY 540
VNP++KTK G+ VGYRLL GS GP+L +DD+PQIRA FTNYNVW+TPY +SE ++GG Y
Sbjct: 538 VNPNRKTKHGNEVGYRLLHGSAAGPLLAQDDFPQIRAAFTNYNVWITPYNRSEVWAGGLY 597
Query: 541 VDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFF 600
D+S GDDTL W+ NR+IE DIV+WYT+G HH P QED+P MPT+S GFELRPTNFF
Sbjct: 598 ADRSQGDDTLAVWSQRNRKIEKEDIVMWYTVGFHHVPSQEDYPTMPTLSGGFELRPTNFF 657
Query: 601 EYNPVLKVIPPKHVQRPNYTGKN 623
E NPVLK P K T KN
Sbjct: 658 ERNPVLKTKPVKVTTARKCTPKN 680
|
|
| TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 623 | |||
| PLN02566 | 646 | PLN02566, PLN02566, amine oxidase (copper-containi | 0.0 | |
| pfam01179 | 411 | pfam01179, Cu_amine_oxid, Copper amine oxidase, en | 1e-152 | |
| PRK11504 | 647 | PRK11504, tynA, tyramine oxidase; Provisional | 1e-146 | |
| COG3733 | 654 | COG3733, TynA, Cu2+-containing amine oxidase [Seco | 1e-130 | |
| PRK14696 | 721 | PRK14696, tynA, tyramine oxidase; Provisional | 2e-91 | |
| pfam02728 | 101 | pfam02728, Cu_amine_oxidN3, Copper amine oxidase, | 3e-23 | |
| pfam02727 | 86 | pfam02727, Cu_amine_oxidN2, Copper amine oxidase, | 2e-19 |
| >gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) | Back alignment and domain information |
|---|
Score = 747 bits (1930), Expect = 0.0
Identities = 339/654 (51%), Positives = 435/654 (66%), Gaps = 57/654 (8%)
Query: 1 MALLFLLFSVTAVLPISSSKRHPLDSLRPSEFTRVQTIVKTSYPSN--NLSFHYVGMDEP 58
+ +L L+F + +S HPLD L P E +++ IV+ S+ N NL+FH++ ++EP
Sbjct: 3 IPILALVFILQCCF--VASLYHPLDPLNPQEINKIRLIVQKSHLGNLPNLTFHFLDLEEP 60
Query: 59 DKAVVYSWLSNSKTKF---PRRAIVIARHNHQTHEIIVDLSKRSIVSDKVYTGHGFPLLT 115
+K V WLS++ + PRRA V+ R +T+E+IVDL+ SI S +VYTGHG+P LT
Sbjct: 61 EKRDVLKWLSSNPSNKSPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLT 120
Query: 116 LEEQHAGAALVLAYEPFKASVKKRGLNISDVVCSASTVGWYGEKKSKRVLKFPCFYTDQG 175
E + L L Y FK S+ +RGLNIS+V C TVGWYGE +KR LK CFY G
Sbjct: 121 FIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGWYGETVTKRALKISCFYRG-G 179
Query: 176 TINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVAT 235
++N+F RPIEGI+I++D++ M++ +Y+DR AP+PK E T++R KP S
Sbjct: 180 SVNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRTKH-KP------FSFPC 232
Query: 236 SSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFI 295
+ + GF I G+ VKWANW F+VGFDAR G ISTAS++D + ++RRVLYRG +SE F+
Sbjct: 233 NVSDSGFTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFV 292
Query: 296 PYQDPSE--------------------------GC-------------QDGTPVKTPNAV 316
PY DP+ C DG K N +
Sbjct: 293 PYMDPTSEWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVI 352
Query: 317 CIFERHAGDVMWRHTEAEMPGHV-REVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKM 375
CIFER++GDV +RHTE +PG V R PE+SLVVRMVAT+GNYDYI+DWEFK SGSIK+
Sbjct: 353 CIFERYSGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKSGSIKV 412
Query: 376 GVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEK 435
GV L+GVLE+K YT DQI +D +GTLVA+N+IA+NHDHFL YYLDLD+DG NSF K
Sbjct: 413 GVDLTGVLEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVK 472
Query: 436 TKLVTRRNTNVNT--PRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPV 493
KL T R T VN PRKSYWTV KETAKTE E R+ L ++P E +VNP+KKTK+G+ V
Sbjct: 473 AKLQTARVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTKLGNQV 532
Query: 494 GYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQW 553
GYRL+ G + +L +DDYPQIRA +T Y VWVT Y KSE+++GG Y D+S GDD L W
Sbjct: 533 GYRLITGQPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVW 592
Query: 554 TDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLK 607
+ NREIEN DIVLWYT+G HH P QEDFPVMPT+ GFELRP NFFE NP+L+
Sbjct: 593 SSRNREIENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646
|
Length = 646 |
| >gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain | Back alignment and domain information |
|---|
| >gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain | Back alignment and domain information |
|---|
| >gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 623 | |||
| PRK11504 | 647 | tynA tyramine oxidase; Provisional | 100.0 | |
| COG3733 | 654 | TynA Cu2+-containing amine oxidase [Secondary meta | 100.0 | |
| PLN02566 | 646 | amine oxidase (copper-containing) | 100.0 | |
| PRK14696 | 721 | tynA tyramine oxidase; Provisional | 100.0 | |
| KOG1186 | 670 | consensus Copper amine oxidase [Secondary metaboli | 100.0 | |
| PF01179 | 413 | Cu_amine_oxid: Copper amine oxidase, enzyme domain | 100.0 | |
| PF02728 | 101 | Cu_amine_oxidN3: Copper amine oxidase, N3 domain; | 99.89 | |
| PF02727 | 86 | Cu_amine_oxidN2: Copper amine oxidase, N2 domain; | 99.79 |
| >PRK11504 tynA tyramine oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-173 Score=1444.28 Aligned_cols=583 Identities=35% Similarity=0.602 Sum_probs=549.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCC-CCCeEEEEEEccCCChHHhhhhhccCCCCCCcEEEEEEEe--CCeEEEEEEECCC
Q 006970 21 RHPLDSLRPSEFTRVQTIVKTSYP-SNNLSFHYVGMDEPDKAVVYSWLSNSKTKFPRRAIVIARH--NHQTHEIIVDLSK 97 (623)
Q Consensus 21 ~HPldpLs~~Ei~~a~~il~~~~~-~~~~~f~~i~L~EP~K~~vl~~l~~~~~~p~R~A~vv~~~--~~~~~e~vV~L~~ 97 (623)
+|||||||++||++|++|||++.+ +..++|.+|+|.||+|++|++|+.+++ ++|+|+|++++ +++++|++|||++
T Consensus 13 ~HPLdpLt~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~g~~--~~R~a~v~~~~~~~~~~~e~vVdL~~ 90 (647)
T PRK11504 13 SHPLDPLTAAEIEAAVAILRAEGLLGESTRFVSIELAEPPKAEVLAFDPGDP--IDRRAFVVLYDRATGKTYEAVVSLTA 90 (647)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccccCCceEEEEeeccCCCHHHHHhhhcCCC--CCcEEEEEEEECCCCcEEEEEEECCC
Confidence 799999999999999999999985 688999999999999999999999765 58999999996 6779999999999
Q ss_pred CeEEEEEeecCCCcCCCCHHHHHHHHHHHhcChHHHHHHHhcCC-CCCceEEccccccccCCC-C-CeeEEEEEEEEeeC
Q 006970 98 RSIVSDKVYTGHGFPLLTLEEQHAGAALVLAYEPFKASVKKRGL-NISDVVCSASTVGWYGEK-K-SKRVLKFPCFYTDQ 174 (623)
Q Consensus 98 ~~v~~~~~~~~~~~p~i~~~E~~~~e~~~~~~p~~~~a~~~~gi-d~~~v~~d~w~~G~~~~~-~-~rRl~~~~~~~r~~ 174 (623)
++|++++.++ ++||+++.+|+.+||++|++||+|+++|++||| ++++|+||||++||++.. + +|||+||+||+|.+
T Consensus 91 ~~V~~~~~~~-~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~~ 169 (647)
T PRK11504 91 GEVVSWEEIP-GVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEERGRRLARGLAFVRAD 169 (647)
T ss_pred CEEEEEEECC-CccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcCCceEEEEEEEEecC
Confidence 9999999887 679999999999999999999999999999999 589999999999988763 3 59999999999988
Q ss_pred CCCCcccCcCCCeEEEEecCCcEEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCceeec-cCCeEEEeceEEEeec
Q 006970 175 GTINMFLRPIEGITIVVDIEEMKVTEYNDREVAPIPKPEPTEYRLSKLKPPFGPRLNSVATSS-TRPGFKINGNTVKWAN 253 (623)
Q Consensus 175 ~~~n~Ya~Pi~gl~~~vD~~~~~vv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~q-eG~sf~v~g~~V~W~~ 253 (623)
+++|+||||||||.++||+++|||++|+|.+..|+|+.. .+|+++++. ++|+++||++|+| ||+||+|+|++|+|||
T Consensus 170 ~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v~g~~V~W~~ 247 (647)
T PRK11504 170 PGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTVDGNEVEWQK 247 (647)
T ss_pred CCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEEcCCEEEECC
Confidence 899999999999999999999999999999888888776 699988765 6899999999999 9999999999999999
Q ss_pred eEEEEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCCCCC--------------------------C---
Q 006970 254 WVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEG--------------------------C--- 304 (623)
Q Consensus 254 W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp~~~--------------------------C--- 304 (623)
|+||+|||+||||+||||+|+| .|+.|||+||+|||||+||||||+++ |
T Consensus 248 W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCpg~ 325 (647)
T PRK11504 248 WSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGE 325 (647)
T ss_pred cEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCcccccccccCCCCCCC
Confidence 9999999999999999999999 67889999999999999999999987 5
Q ss_pred ----------CCCccEEecceEEEeeecCCCceeeeeecCCCCe-eeecccceEEEEEEEEEeeccceEEEEEEccCccE
Q 006970 305 ----------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSI 373 (623)
Q Consensus 305 ----------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-v~~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtI 373 (623)
.+|+|++++|||||||+| +|+||||++++++.. ++|+| +||||+|+|||||||||+|+|||||+|
T Consensus 326 i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~~v~r~r---~LVvr~I~TVgNYdYi~~w~F~qdG~I 401 (647)
T PRK11504 326 IRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSAEVRRSR---RLVISFFATVGNYDYGFYWYFYQDGTI 401 (647)
T ss_pred CEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcEEEEecc---EEEEEEEEecccccEEEEEEEecCceE
Confidence 679999999999999999 789999999997766 66666 999999999999999999999999999
Q ss_pred EEEEEEeeeeeeeeecccccCccccCCccceecCCccccccceeEEeeeeccCCCCCCceEEEEEEEecCCCCCCCccee
Q 006970 374 KMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSY 453 (623)
Q Consensus 374 e~~v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~ 453 (623)
|++|+|||||+|++.. ++++.+||++|+|+++|++|||+|||||||||||.+|||+++|+++++.. ++||++++
T Consensus 402 e~eV~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~-~~np~g~~ 475 (647)
T PRK11504 402 EFEVKLTGIVFTAAVP-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG-PDNPHGNA 475 (647)
T ss_pred EEEEEeeeEEEeeeeC-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC-CCCccceE
Confidence 9999999999987542 12356899999999999999999999999999999999999999999876 58999999
Q ss_pred EEEEEEeecchhhhhhcCCC-CCcEEEEeCCCCCCCCCCceeEEEccCCcccCCCCCCChhccccccceeeeEEeecCCC
Q 006970 454 WTVEKETAKTEFEARLNLDT-KPMEFALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKS 532 (623)
Q Consensus 454 ~~~~~~~l~tE~~a~~~~~~-~~r~w~i~N~~~~N~~G~p~gYkl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~ 532 (623)
|+++++++++|++|++++++ ++|+|+|+|++++|++|+|+||||+|++++.+|++++|+..+||+||+|+||||+|+++
T Consensus 476 ~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~ 555 (647)
T PRK11504 476 FYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDPD 555 (647)
T ss_pred EEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCcEEEeccCCC
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCccCCCCCCChhccccCCCceeeCCeEEEEEeccccCCCCCCCCcccceeeeeEEEecCCCCCCCCCCCCCCC
Q 006970 533 EKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPTNFFEYNPVLKVIPPK 612 (623)
Q Consensus 533 E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~ 612 (623)
|+||||+|+||+.+++||++|+++||+|+|+|||+|||||+||+||+|||||||++++||+|||+|||++||+||+||+.
T Consensus 556 E~~aag~y~~Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~NPaldvp~s~ 635 (647)
T PRK11504 556 ERYAAGDYPNQSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRNPALDLPPEP 635 (647)
T ss_pred ccccCCCCcccCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCCccccCCCcc
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCC
Q 006970 613 HVQRPNYT 620 (623)
Q Consensus 613 ~~~~~~~~ 620 (623)
+..+|.+.
T Consensus 636 ~~~~~~~~ 643 (647)
T PRK11504 636 PAACHEHG 643 (647)
T ss_pred cccccccC
Confidence 86655543
|
|
| >COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PLN02566 amine oxidase (copper-containing) | Back alignment and domain information |
|---|
| >PRK14696 tynA tyramine oxidase; Provisional | Back alignment and domain information |
|---|
| >KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
| >PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines | Back alignment and domain information |
|---|
| >PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines | Back alignment and domain information |
|---|
| >PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 623 | ||||
| 1ksi_A | 642 | Crystal Structure Of A Eukaryotic (Pea Seedling) Co | 0.0 | ||
| 1w2z_A | 649 | Psao And Xenon Length = 649 | 0.0 | ||
| 2wgq_A | 727 | Zinc Substituted E Coli Copper Amine Oxidase, A Mod | 2e-73 | ||
| 1oac_A | 727 | Crystal Structure Of A Quinoenzyme: Copper Amine Ox | 1e-72 | ||
| 1qaf_A | 721 | The Active Site Base Controls Cofactor Reactivity I | 1e-72 | ||
| 1qal_A | 721 | The Active Site Base Controls Cofactor Reactivity I | 1e-72 | ||
| 1qak_A | 722 | The Active Site Base Controls Cofactor Reactivity I | 1e-72 | ||
| 1jrq_A | 727 | X-Ray Structure Analysis Of The Role Of The Conserv | 3e-72 | ||
| 1ivu_A | 638 | Crystal Structure Of Copper Amine Oxidase From Arth | 5e-51 | ||
| 2cwt_A | 638 | Catalytic Base Deletion In Copper Amine Oxidase Fro | 3e-50 | ||
| 2e2u_A | 628 | Substrate Schiff-Base Analogue Of Copper Amine Oxid | 3e-50 | ||
| 1ivv_A | 638 | Crystal Structure Of Copper Amine Oxidase From Arth | 3e-50 | ||
| 2yx9_A | 638 | Crystal Structure Of D298k Copper Amine Oxidase Fro | 4e-50 | ||
| 1sih_A | 646 | Agao In Covalent Complex With The Inhibitor Moba (" | 4e-50 | ||
| 1ui7_A | 638 | Site-Directed Mutagenesis Of His433 Involved In Bin | 5e-50 | ||
| 1ui8_A | 638 | Site-directed Mutagenesis Of His592 Involved In Bin | 4e-49 | ||
| 3sx1_A | 692 | Hansenula Polymorpha Copper Amine Oxidase-1 In Its | 2e-47 | ||
| 1ekm_A | 656 | Crystal Structure At 2.5 A Resolution Of Zinc-Subst | 2e-47 | ||
| 1a2v_A | 655 | Copper Amine Oxidase From Hansenula Polymorpha Leng | 1e-46 | ||
| 3n9h_A | 692 | Crystal Structural Of Mutant Y305a In The Copper Am | 1e-45 | ||
| 2oov_C | 660 | Crystal Structure Of Hansenula Polymorpha Amine Oxi | 5e-45 | ||
| 2oov_A | 660 | Crystal Structure Of Hansenula Polymorpha Amine Oxi | 4e-44 | ||
| 3nbb_B | 663 | Crystal Structure Of Mutant Y305f Expressed In E. C | 2e-43 | ||
| 3nbj_B | 657 | Crystal Structure Of Y305f Mutant Of The Copper Ami | 2e-43 | ||
| 3loy_A | 633 | Crystal Structure Of A Copper-Containing Benzylamin | 2e-39 | ||
| 3hi7_A | 731 | Crystal Structure Of Human Diamine Oxidase Length = | 7e-27 | ||
| 3ala_A | 748 | Crystal Structure Of Vascular Adhesion Protein-1 In | 1e-21 | ||
| 1tu5_A | 746 | Crystal Structure Of Bovine Plasma Copper-Containin | 1e-21 | ||
| 1us1_A | 763 | Crystal Structure Of Human Vascular Adhesion Protei | 1e-21 | ||
| 2c10_A | 735 | The Structure Of A Truncated, Soluble Version Of Se | 1e-21 | ||
| 3pgb_A | 797 | Crystal Structure Of Aspergillus Nidulans Amine Oxi | 3e-21 | ||
| 1rky_A | 747 | Pplo + Xe Length = 747 | 1e-13 | ||
| 1n9e_A | 787 | Crystal Structure Of Pichia Pastoris Lysyl Oxidase | 1e-13 |
| >pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 | Back alignment and structure |
|
| >pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 | Back alignment and structure |
| >pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 | Back alignment and structure |
| >pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 | Back alignment and structure |
| >pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 | Back alignment and structure |
| >pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 | Back alignment and structure |
| >pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 | Back alignment and structure |
| >pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 | Back alignment and structure |
| >pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 | Back alignment and structure |
| >pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 | Back alignment and structure |
| >pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 | Back alignment and structure |
| >pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 | Back alignment and structure |
| >pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 | Back alignment and structure |
| >pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 | Back alignment and structure |
| >pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 | Back alignment and structure |
| >pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 | Back alignment and structure |
| >pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 | Back alignment and structure |
| >pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 | Back alignment and structure |
| >pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 | Back alignment and structure |
| >pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 | Back alignment and structure |
| >pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 | Back alignment and structure |
| >pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 | Back alignment and structure |
| >pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 | Back alignment and structure |
| >pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 | Back alignment and structure |
| >pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 | Back alignment and structure |
| >pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 | Back alignment and structure |
| >pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 | Back alignment and structure |
| >pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 | Back alignment and structure |
| >pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 | Back alignment and structure |
| >pdb|1RKY|A Chain A, Pplo + Xe Length = 747 | Back alignment and structure |
| >pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 623 | |||
| 1ksi_A | 642 | Copper amine oxidase; PEA seedling, oxidoreductase | 0.0 | |
| 1w6g_A | 646 | Phenylethylamine oxidase; copper containing, metal | 1e-156 | |
| 3sxx_A | 692 | Peroxisomal primary amine oxidase; oxidoreductase, | 1e-153 | |
| 1spu_A | 727 | Copper amine oxidase; oxidoreductase, TPQ, peripla | 1e-150 | |
| 3loy_A | 633 | Copper amine oxidase; TPQ, oxidoreductase; HET: TP | 1e-144 | |
| 1tu5_A | 746 | Copper amine oxidase, liver isozyme; oxidoreductas | 1e-129 | |
| 1w7c_A | 747 | Lysyl oxidase; AMNE oxidase, copper, oxidoreductas | 1e-126 | |
| 3hi7_A | 731 | Amiloride-sensitive amine oxidase; oxidoreductase, | 1e-122 | |
| 3pgb_A | 797 | Putative uncharacterized protein; oxidoreductase, | 1e-121 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 |
| >3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 | Back alignment and structure |
|---|
| >1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 623 | |||
| 1ksi_A | 642 | Copper amine oxidase; PEA seedling, oxidoreductase | 100.0 | |
| 3sxx_A | 692 | Peroxisomal primary amine oxidase; oxidoreductase, | 100.0 | |
| 3loy_A | 633 | Copper amine oxidase; TPQ, oxidoreductase; HET: TP | 100.0 | |
| 1w6g_A | 646 | Phenylethylamine oxidase; copper containing, metal | 100.0 | |
| 1spu_A | 727 | Copper amine oxidase; oxidoreductase, TPQ, peripla | 100.0 | |
| 1w7c_A | 747 | Lysyl oxidase; AMNE oxidase, copper, oxidoreductas | 100.0 | |
| 1tu5_A | 746 | Copper amine oxidase, liver isozyme; oxidoreductas | 100.0 | |
| 3hi7_A | 731 | Amiloride-sensitive amine oxidase; oxidoreductase, | 100.0 | |
| 3pgb_A | 797 | Putative uncharacterized protein; oxidoreductase, | 100.0 |
| >3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* | Back alignment and structure |
|---|
| >1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 623 | ||||
| d1w2za1 | 441 | b.30.2.1 (A:207-647) Copper amine oxidase, domain | 1e-149 | |
| d2oqea1 | 436 | b.30.2.1 (A:237-672) Copper amine oxidase, domain | 1e-127 | |
| d1w6ga1 | 417 | b.30.2.1 (A:212-628) Copper amine oxidase, domain | 1e-124 | |
| d1d6za1 | 424 | b.30.2.1 (A:301-724) Copper amine oxidase, domain | 1e-123 | |
| d1w7ca1 | 460 | b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 | 1e-115 | |
| d1w2za3 | 108 | d.17.2.1 (A:99-206) Copper amine oxidase, domains | 3e-38 | |
| d1w2za2 | 93 | d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 | 2e-29 | |
| d1w6ga3 | 115 | d.17.2.1 (A:97-211) Copper amine oxidase, domains | 9e-29 | |
| d1d6za3 | 115 | d.17.2.1 (A:186-300) Copper amine oxidase, domains | 6e-26 | |
| d2oqea2 | 98 | d.17.2.1 (A:18-115) Copper amine oxidase, domains | 9e-24 | |
| d2oqea3 | 121 | d.17.2.1 (A:116-236) Copper amine oxidase, domains | 2e-23 | |
| d1d6za2 | 95 | d.17.2.1 (A:91-185) Copper amine oxidase, domains | 4e-23 | |
| d1w6ga2 | 88 | d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 | 4e-18 |
| >d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Amine oxidase catalytic domain family: Amine oxidase catalytic domain domain: Copper amine oxidase, domain 3 species: Pea seedling (Pisum sativum) [TaxId: 3888]
Score = 436 bits (1123), Expect = e-149
Identities = 231/441 (52%), Positives = 290/441 (65%), Gaps = 42/441 (9%)
Query: 219 LSKLKPPFGPRLNS-VATSSTRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDIN 277
+SK PPFGP+ +S + PGF+ING++V WANW F++GFD R G +IS ASIYD+
Sbjct: 1 VSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLE 60
Query: 278 MHKYRRVLYRGFISELFIPYQDPS------------------------EGC--------- 304
HK RRVLY+G+ISELF+PYQDP+
Sbjct: 61 KHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFI 120
Query: 305 ------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VREVRPEVSLVVRMVATVG 357
+GTP+ NA+C+FE++ +MWRHTE +P + E R EV+L+VR + TVG
Sbjct: 121 DTYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVG 179
Query: 358 NYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHF 417
NYD +IDWEFK SGSIK + LSG+LE+K + D+IKED HG LV+ NSI I HDHF
Sbjct: 180 NYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHF 239
Query: 418 LNYYLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPME 477
YYLD DIDG NSFEKT L T R + ++ RKSYWT E +TAKTE +A++ + P E
Sbjct: 240 YIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAE 299
Query: 478 FALVNPSKKTKIGHPVGYRLLPGSIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSG 537
+VNP+ KT +G+ VGYRL+P P+L EDDYPQIR FTNYNVWVT Y ++EK++G
Sbjct: 300 LVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAG 359
Query: 538 GNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQEDFPVMPTVSCGFELRPT 597
G YVD S GDDTL WT NREI N DIV+W+ +GIHH P QEDFP+MP +S FELRPT
Sbjct: 360 GLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPT 419
Query: 598 NFFEYNPVLKVIPPKHVQRPN 618
NFFE NPVLK + P+ V P
Sbjct: 420 NFFERNPVLKTLSPRDVAWPG 440
|
| >d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 | Back information, alignment and structure |
|---|
| >d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 | Back information, alignment and structure |
|---|
| >d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 | Back information, alignment and structure |
|---|
| >d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 | Back information, alignment and structure |
|---|
| >d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 | Back information, alignment and structure |
|---|
| >d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 | Back information, alignment and structure |
|---|
| >d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 | Back information, alignment and structure |
|---|
| >d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
| >d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 | Back information, alignment and structure |
|---|
| >d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 | Back information, alignment and structure |
|---|
| >d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 | Back information, alignment and structure |
|---|
| >d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 623 | |||
| d1w2za1 | 441 | Copper amine oxidase, domain 3 {Pea seedling (Pisu | 100.0 | |
| d1w6ga1 | 417 | Copper amine oxidase, domain 3 {Arthrobacter globi | 100.0 | |
| d2oqea1 | 436 | Copper amine oxidase, domain 3 {Yeast (Hansenula p | 100.0 | |
| d1d6za1 | 424 | Copper amine oxidase, domain 3 {Escherichia coli [ | 100.0 | |
| d1w7ca1 | 460 | Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor | 100.0 | |
| d1w2za3 | 108 | Copper amine oxidase, domains 1 and 2 {Pea seedlin | 99.96 | |
| d1w6ga3 | 115 | Copper amine oxidase, domains 1 and 2 {Arthrobacte | 99.95 | |
| d1d6za3 | 115 | Copper amine oxidase, domains 1 and 2 {Escherichia | 99.94 | |
| d2oqea3 | 121 | Copper amine oxidase, domains 1 and 2 {Yeast (Hans | 99.94 | |
| d2oqea2 | 98 | Copper amine oxidase, domains 1 and 2 {Yeast (Hans | 99.88 | |
| d1w2za2 | 93 | Copper amine oxidase, domains 1 and 2 {Pea seedlin | 99.87 | |
| d1d6za2 | 95 | Copper amine oxidase, domains 1 and 2 {Escherichia | 99.87 | |
| d1w6ga2 | 88 | Copper amine oxidase, domains 1 and 2 {Arthrobacte | 99.76 | |
| d1w7ca2 | 127 | Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia | 99.33 | |
| d1w7ca3 | 146 | Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia | 89.34 |
| >d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Supersandwich superfamily: Amine oxidase catalytic domain family: Amine oxidase catalytic domain domain: Copper amine oxidase, domain 3 species: Pea seedling (Pisum sativum) [TaxId: 3888]
Probab=100.00 E-value=1.4e-126 Score=1034.87 Aligned_cols=397 Identities=58% Similarity=1.055 Sum_probs=373.1
Q ss_pred CCCCCCCCCCCceeec-cCCeEEEeceEEEeeceEEEEEecCCcceeEEeeEEecCCCCeEeEEEeeeceeeeeeccCCC
Q 006970 222 LKPPFGPRLNSVATSS-TRPGFKINGNTVKWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDP 300 (623)
Q Consensus 222 ~~~~~r~~lkP~~i~q-eG~sf~v~g~~V~W~~W~f~~gf~~reGl~L~dv~~~d~~~~~~r~V~yr~Sl~Em~VpY~dp 300 (623)
+++++|+++|||+|+| ||+||+|+|++|+||+|+|++|||+||||+||||+|+|+..+++|||+||+|||||+|||+||
T Consensus 4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp 83 (441)
T d1w2za1 4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP 83 (441)
T ss_dssp CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence 4567899999999999 999999999999999999999999999999999999998557889999999999999999999
Q ss_pred CCC--------------------------C-------------CCCccEEecceEEEeeecCCCceeeeeecCCCCe-ee
Q 006970 301 SEG--------------------------C-------------QDGTPVKTPNAVCIFERHAGDVMWRHTEAEMPGH-VR 340 (623)
Q Consensus 301 ~~~--------------------------C-------------~~G~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-v~ 340 (623)
+++ | .+|+|++++|||||||+| +|++|||++++.++. +.
T Consensus 84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~ 162 (441)
T d1w2za1 84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE 162 (441)
T ss_dssp STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence 987 5 789999999999999999 679999999988766 77
Q ss_pred ecccceEEEEEEEEEeeccceEEEEEEccCccEEEEEEEeeeeeeeeecccccCccccCCccceecCCccccccceeEEe
Q 006970 341 EVRPEVSLVVRMVATVGNYDYIIDWEFKPSGSIKMGVGLSGVLEVKPVEYTYVDQIKEDQHGTLVADNSIAINHDHFLNY 420 (623)
Q Consensus 341 ~~r~~~~LVvr~i~TVgNYdYi~~w~F~qDGtIe~~v~aTG~l~t~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~ 420 (623)
++|++++||||+|+|||||||||+|+|||||+||+||+|||||++++......++.++..||++|+|+++|++|||+|||
T Consensus 163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~ 242 (441)
T d1w2za1 163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIY 242 (441)
T ss_dssp EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEE
T ss_pred eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEE
Confidence 77888899999999999999999999999999999999999999876544333333457899999999999999999999
Q ss_pred eeeccCCCCCCceEEEEEEEecCCCCCCCcceeEEEEEEeecchhhhhhcCCCCCcEEEEeCCCCCCCCCCceeEEEccC
Q 006970 421 YLDLDIDGYANSFEKTKLVTRRNTNVNTPRKSYWTVEKETAKTEFEARLNLDTKPMEFALVNPSKKTKIGHPVGYRLLPG 500 (623)
Q Consensus 421 RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~~~~~~~~l~tE~~a~~~~~~~~r~w~i~N~~~~N~~G~p~gYkl~p~ 500 (623)
||||||||.+|||+++|++++++..+++|++..++++++++++|++|+..++.++|+|+|+|++++|++|+|+||||+|+
T Consensus 243 RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~ 322 (441)
T d1w2za1 243 YLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPA 322 (441)
T ss_dssp EEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECC
T ss_pred EEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccC
Confidence 99999999999999999999998766777777788999999999999888877889999999999999999999999999
Q ss_pred CcccCCCCCCChhccccccceeeeEEeecCCCCCCCCCcCccCCCCCCChhccccCCCceeeCCeEEEEEeccccCCCCC
Q 006970 501 SIIGPMLMEDDYPQIRAGFTNYNVWVTPYKKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENTDIVLWYTMGIHHAPCQE 580 (623)
Q Consensus 501 ~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~E 580 (623)
+++.+++.++|+..+||+||+|+||||||+|+|+||+|+|++|+.++++|+.|+++||+|+|||||+|+|||+||+||+|
T Consensus 323 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~E 402 (441)
T d1w2za1 323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQE 402 (441)
T ss_dssp SCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGG
T ss_pred CCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccceeeeeEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 006970 581 DFPVMPTVSCGFELRPTNFFEYNPVLKVIPPKHVQRPNY 619 (623)
Q Consensus 581 D~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~~~~~ 619 (623)
||||||++++||+|||+|||++||+||+|++.+...|.|
T Consensus 403 D~Pvmp~~~~gf~L~P~nFF~~nPald~~~~~~~~~~~~ 441 (441)
T d1w2za1 403 DFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGC 441 (441)
T ss_dssp GSSSCCCEEEECEEEEESSSSSCTTTTCCCCCCCCTTCC
T ss_pred hcCCcceeeeeEEEECCCCCCCCCccCCCCcccccCCCC
Confidence 999999999999999999999999999999999999988
|
| >d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} | Back information, alignment and structure |
|---|
| >d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} | Back information, alignment and structure |
|---|
| >d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} | Back information, alignment and structure |
|---|
| >d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} | Back information, alignment and structure |
|---|
| >d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} | Back information, alignment and structure |
|---|
| >d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} | Back information, alignment and structure |
|---|