Citrus Sinensis ID: 007045

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620
MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW
cccccccccccccccccccHHHHcccccccccHHHHHcccccccHHcccccHHccccccccccccccccccccccHHccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHHHHHccccccccccEEEEEccccHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHccccccccEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
cccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEcccccccEEEEEccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHHHcccEEEEEcccccEEEEEcHHHccHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHccHHHHccEEEcccccHHHHcccccccccEHHHcccEcccHHHccccccccccccHHHHHHHHccccccccEEEEcccccccEEcccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
msgpldrfarpcfegfsgsderrerksdfenseDERRTRIGSLKKKALNASTKFKhslkkkssrrksdgrvssvsiedvrdvEELQAVDAFRQSLimdellperhdDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVlsyyphgyhgvdkegrpvyierlgkvdsnklmqvTTMDRYIRYHVQGFEKAFavkfpactiaakrhidsstsildvqgvnfsKNARELILRLQkidgdnypetLHQMFIINAGPGFRLLWNTVksfldpkttskiHVLGNKYQSKLLEIIDarelpeflggtcncadqggclrsdkgpwqnpeILKMVLNGGAPRARQIVKVLNSdgkviayakppmlkgsdtstaesgseaediaspkamksyshlrltpvreeakvvgktsyagsfsgydeyvpMVDKAvdsswkkqpslrspaakgslpqlptsktpegIRARIWAAVMAFFMMFVTLFRSVAYRvthripetstghdlnisevavdanekeefrppspspsltevDLLSSVTKRLSELEEKVDtlqakpsempyeKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW
msgpldrfarpcfegfsgsderrerksdfensederrtrigslkkkalnastkfkhslkkkssrrksdgrvssvsiedvrdveelqaVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHgyhgvdkegrPVYIERlgkvdsnklmqVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRhidsstsildvqgvnFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKViayakppmlkgsdtsTAESgseaediaspkamksyshlrltpvreeakvvgktsyagsfsgydeYVPMVDKAVDSSWKKQPSlrspaakgslpqlptsktpeGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRipetstghdlnisEVAVDANEkeefrppspspsltevdLLSSVTKRLSELeekvdtlqakpsempyEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEakfrkkklcw
MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNAstkfkhslkkkssrrksdgrvssvsIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKFRKKKLCW
*********************************************************************************VEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYA*******************************************KVVGKTSYAGSFSGYDEYVPMVD*********************************IRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPET*****************************************************************ELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYID**************
******R*****************************************************************************LQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRAR**************************************************************************DEYVPMVDKAV**************************TPEGIRARIWAAVMAFFMMFVTLFRSVAY********************************************LSSVTKRLSELEEKV***********YEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLA*********FRKKKLCW
MSGPLDRFARPCFEGFS********************TRIGSLKKKALNAS************************IEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPML*****************ASPKAMKSYSHLRLTPVREEAKVVGKTSYAGSFSGYDEYVPMVDKA***************************TPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVD******************VDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEE**********
*******************************SE*ER*TRIGSLKKKALNASTKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKV***DGK*I**********************************************************SGYDEYVPMVDKAVDSSWK************SLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIP******************************SLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEALMRQEDLLAYIDRQEEAKF*******
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MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKKKSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVKVLNSDGKVIAYAKPPMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEAKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRARIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTEVDLxxxxxxxxxxxxxxxxxxxxxPSEMPYEKEELLHAAVCRxxxxxxxxxxxxxxxxxxxxxQEDLLAYIDRQEEAKFRKKKLCW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query620 2.2.26 [Sep-21-2011]
Q10137286 Sec14 cytosolic factor OS yes no 0.372 0.807 0.432 3e-50
P24859301 SEC14 cytosolic factor OS yes no 0.403 0.830 0.414 5e-50
P45816492 SEC14 cytosolic factor OS yes no 0.45 0.567 0.364 2e-49
P46250301 SEC14 cytosolic factor OS N/A no 0.430 0.887 0.402 4e-49
Q75DK1308 SEC14 cytosolic factor OS yes no 0.398 0.801 0.403 2e-47
P24280304 SEC14 cytosolic factor OS yes no 0.411 0.838 0.386 5e-47
P53989302 SEC14 cytosolic factor OS yes no 0.383 0.788 0.400 7e-47
P33324310 CRAL-TRIO domain-containi no no 0.411 0.822 0.374 7e-42
Q92503715 SEC14-like protein 1 OS=H yes no 0.343 0.297 0.358 3e-30
Q7PWB1684 Protein real-time OS=Anop yes no 0.345 0.312 0.348 4e-29
>sp|Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=4 SV=1 Back     alignment and function desciption
 Score =  200 bits (508), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 102/236 (43%), Positives = 145/236 (61%), Gaps = 5/236 (2%)

Query: 103 ERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPH 162
           ER DD   +LRFL+ARKF++ ++  M+ +  +WRKEFGVD ++++F + E   V  YYP 
Sbjct: 46  ERLDD-ATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYDEKEAVSKYYPQ 104

Query: 163 GYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRH 222
            YH  D +GRPVY+E+LG +D  KL Q+TT +R ++  V  +E     +FPAC+  A   
Sbjct: 105 FYHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKRFPACSRKAGGL 164

Query: 223 IDSSTSILDVQGVNFSK--NARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVK 280
           I++S +I+D++GV  +   +    I +   I  D YPE + + ++INA  GF   +N +K
Sbjct: 165 IETSCTIMDLKGVGITSIHSVYSYIRQASSISQDYYPERMGKFYVINAPWGFSSAFNLIK 224

Query: 281 SFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQ 336
            FLD  T  KIH+LG+ Y+S LLE I A  LP  LGG C C   GGC  SD GPW 
Sbjct: 225 GFLDEATVKKIHILGSNYKSALLEQIPADNLPAKLGGNCQCP--GGCELSDAGPWH 278
Has a direct role in controlling cell septation and in forespore membrane formation.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 Back     alignment and function description
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 Back     alignment and function description
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 Back     alignment and function description
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 Back     alignment and function description
>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 Back     alignment and function description
>sp|Q7PWB1|RETM_ANOGA Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query620
359474936625 PREDICTED: uncharacterized protein LOC10 0.998 0.990 0.829 0.0
255543761624 phosphatidylinositol transporter, putati 0.996 0.990 0.822 0.0
224080383636 predicted protein [Populus trichocarpa] 0.990 0.965 0.812 0.0
356538743629 PREDICTED: uncharacterized protein LOC10 0.998 0.984 0.807 0.0
224103379626 predicted protein [Populus trichocarpa] 0.998 0.988 0.813 0.0
357467367623 Sec14 cytosolic factor [Medicago truncat 0.995 0.990 0.806 0.0
14486705625 phosphatidylinositol transfer-like prote 0.998 0.990 0.803 0.0
357467365709 Sec14 cytosolic factor [Medicago truncat 0.990 0.866 0.805 0.0
356545143629 PREDICTED: uncharacterized protein LOC10 0.998 0.984 0.796 0.0
164564744631 CM0216.430.nc [Lotus japonicus] 0.990 0.973 0.804 0.0
>gi|359474936|ref|XP_002283681.2| PREDICTED: uncharacterized protein LOC100252199 [Vitis vinifera] gi|297744421|emb|CBI37683.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1077 bits (2786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/626 (82%), Positives = 569/626 (90%), Gaps = 7/626 (1%)

Query: 1   MSGPLDRFARPCFEGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNASTKFKHSLKK 60
           MSGPLDRFARPCFEGFSG DERRERKSDFENSEDERRTRIGSLKKKA+NASTKFKHSLKK
Sbjct: 1   MSGPLDRFARPCFEGFSGHDERRERKSDFENSEDERRTRIGSLKKKAINASTKFKHSLKK 60

Query: 61  KSSRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKF 120
           KSSRRKSDGRVSSVSIEDVRDVEEL+AVDAFRQ+LI+DELLP +HDDYHMMLRFLKARKF
Sbjct: 61  KSSRRKSDGRVSSVSIEDVRDVEELEAVDAFRQALILDELLPTKHDDYHMMLRFLKARKF 120

Query: 121 DIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLG 180
           DI+KAKHMW +M+QWRK+FG DTI+EDFEFKE+NEVL YYPHG+HGVDKEGRPVYIERLG
Sbjct: 121 DIEKAKHMWTDMIQWRKDFGADTILEDFEFKELNEVLKYYPHGHHGVDKEGRPVYIERLG 180

Query: 181 KVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGV---NF 237
           KVD  KLMQVTTMDRY++YHVQ FEK+FA+KFPACTIAAKRHIDSST+ILDVQGV   N 
Sbjct: 181 KVDPYKLMQVTTMDRYVKYHVQEFEKSFALKFPACTIAAKRHIDSSTTILDVQGVGFKNL 240

Query: 238 SKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNK 297
           +K AR+LI+RLQKIDGDNYPETL QMFIINAGPGFRLLWNTVK+FLDPKTTSKIHVLGNK
Sbjct: 241 TKAARDLIMRLQKIDGDNYPETLCQMFIINAGPGFRLLWNTVKTFLDPKTTSKIHVLGNK 300

Query: 298 YQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRARQIVK 357
           YQ+KLLEIIDA ELPEFLGGTC CADQGGCLRSDKGPW NP+ILKM+ NG A RARQ+VK
Sbjct: 301 YQNKLLEIIDASELPEFLGGTCTCADQGGCLRSDKGPWNNPDILKMMHNGDARRARQVVK 360

Query: 358 VLNSDGKVIAYAKP--PMLKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREEAKVV 415
           VLNS+GKVIAYAKP  PM+KGSDTSTAESGSEAEDIASPK  KSYS LRLTPVREEAKVV
Sbjct: 361 VLNSEGKVIAYAKPQYPMMKGSDTSTAESGSEAEDIASPKMTKSYSQLRLTPVREEAKVV 420

Query: 416 GKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSP-AAKGSLPQLPTSKTPEGIRARIW 474
           GK SYAGSF GYDEYVPMVDKAVD+ WKKQ +L+ P ++KG+LP L T K+PEGI  RI 
Sbjct: 421 GKVSYAGSFGGYDEYVPMVDKAVDAGWKKQAALQRPSSSKGTLPLLDTQKSPEGIHTRIL 480

Query: 475 AAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANEKEEFRPPSPSPSLTE 534
           +A++AFFM   TLF +VA RVT+++P+    HD NI ++A DA  KE+FRPPSP P+ TE
Sbjct: 481 SALLAFFMTLFTLFCTVALRVTNKLPD-RVDHDENIPQLAPDATHKEDFRPPSPIPAFTE 539

Query: 535 VDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIATKKALHEA 594
            DLLSSV K+LSELEEKVDTLQAKPSEMPYEKEELL+AAVCRVDALEAELIATKKALHEA
Sbjct: 540 ADLLSSVLKKLSELEEKVDTLQAKPSEMPYEKEELLNAAVCRVDALEAELIATKKALHEA 599

Query: 595 LMRQEDLLAYIDRQEEAKFRKKKLCW 620
           L+RQE+LLAYID QEEAKFRKKK CW
Sbjct: 600 LLRQEELLAYIDSQEEAKFRKKKFCW 625

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255543761|ref|XP_002512943.1| phosphatidylinositol transporter, putative [Ricinus communis] gi|223547954|gb|EEF49446.1| phosphatidylinositol transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224080383|ref|XP_002306120.1| predicted protein [Populus trichocarpa] gi|222849084|gb|EEE86631.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356538743|ref|XP_003537860.1| PREDICTED: uncharacterized protein LOC100785793 [Glycine max] Back     alignment and taxonomy information
>gi|224103379|ref|XP_002313032.1| predicted protein [Populus trichocarpa] gi|222849440|gb|EEE86987.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357467367|ref|XP_003603968.1| Sec14 cytosolic factor [Medicago truncatula] gi|355493016|gb|AES74219.1| Sec14 cytosolic factor [Medicago truncatula] Back     alignment and taxonomy information
>gi|14486705|gb|AAK63247.1|AF367433_1 phosphatidylinositol transfer-like protein III [Lotus japonicus] Back     alignment and taxonomy information
>gi|357467365|ref|XP_003603967.1| Sec14 cytosolic factor [Medicago truncatula] gi|355493015|gb|AES74218.1| Sec14 cytosolic factor [Medicago truncatula] Back     alignment and taxonomy information
>gi|356545143|ref|XP_003541004.1| PREDICTED: uncharacterized protein LOC100784405 [Glycine max] Back     alignment and taxonomy information
>gi|164564744|dbj|BAF98225.1| CM0216.430.nc [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query620
TAIR|locus:2050019637 AT2G21520 [Arabidopsis thalian 0.988 0.962 0.711 2.5e-239
TAIR|locus:2136288614 AT4G39170 [Arabidopsis thalian 0.958 0.967 0.709 2.3e-229
TAIR|locus:2013134608 AT1G19650 [Arabidopsis thalian 0.970 0.990 0.587 1.8e-181
TAIR|locus:2018416668 AT1G75370 [Arabidopsis thalian 0.970 0.901 0.586 3e-181
TAIR|locus:2115265543 SFH12 "AT4G36490" [Arabidopsis 0.491 0.561 0.731 9.8e-146
TAIR|locus:2049319548 SFH3 "SEC14-like 3" [Arabidops 0.582 0.658 0.638 5.6e-141
TAIR|locus:2139564554 COW1 "CAN OF WORMS1" [Arabidop 0.517 0.579 0.663 1.9e-140
TAIR|locus:2136303554 SEC14 "SECRETION 14" [Arabidop 0.519 0.581 0.689 9.5e-135
TAIR|locus:2042634547 AT2G16380 [Arabidopsis thalian 0.524 0.594 0.628 1.8e-129
TAIR|locus:2087293579 AT3G24840 [Arabidopsis thalian 0.670 0.718 0.534 1.3e-122
TAIR|locus:2050019 AT2G21520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2307 (817.2 bits), Expect = 2.5e-239, P = 2.5e-239
 Identities = 449/631 (71%), Positives = 520/631 (82%)

Query:     1 MSGPLDRFARPCF----EGFSGSDERRERKSDFENSEDERRTRIGSLKKKALNAXXXXXX 56
             MSGPLDRFARP F    EGF  SDE++ERKSDFENSEDERRTRIGSLKKKA+NA      
Sbjct:     1 MSGPLDRFARPSFTTGFEGFLSSDEKKERKSDFENSEDERRTRIGSLKKKAINASTKFKH 60

Query:    57 XXXXXXXXXXXXXXXXXXXIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLK 116
                                IEDVRDVEELQAVDAFRQSL+MDELLP+RHDDYHMMLRFLK
Sbjct:    61 SLKKKSGRRKSDGRVSSVSIEDVRDVEELQAVDAFRQSLLMDELLPDRHDDYHMMLRFLK 120

Query:   117 ARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYI 176
             ARKFD++KAK MWA+M+QWRKEFG DTI++DF+F+EINEVL +YP  YHGVDKEGRP+YI
Sbjct:   121 ARKFDVEKAKQMWADMIQWRKEFGTDTIIQDFDFEEINEVLKHYPQCYHGVDKEGRPIYI 180

Query:   177 ERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGV- 235
             ERLGKVD N+LMQVT+MDRY+RYHV+ FE++F +KFP+CTI+AKRHIDSST+ILDVQGV 
Sbjct:   181 ERLGKVDPNRLMQVTSMDRYVRYHVKEFERSFMIKFPSCTISAKRHIDSSTTILDVQGVG 240

Query:   236 --NFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHV 293
               NF+K+AR+LI RLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKT++KIHV
Sbjct:   241 LKNFNKSARDLITRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTSAKIHV 300

Query:   294 LGNKYQSKLLEIIDARELPEFLGGTCNCADQGGCLRSDKGPWQNPEILKMVLNGGAPRAR 353
             LG KY SKLLE+ID  ELPEFLGG C CADQGGC+ SDKGPW+NPEI+KMVL+GGA RAR
Sbjct:   301 LGYKYLSKLLEVIDVNELPEFLGGACTCADQGGCMLSDKGPWKNPEIVKMVLHGGAHRAR 360

Query:   354 QIVKVLNSDGKVIAYAKPPM--LKGSDTSTAESGSEAEDIASPKAMKSYSHLRLTPVREE 411
             Q+VKVLNS+GKVIAYAKP    +KGSDTSTAESGS+AEDI SPKA+KS+SHLRLTPVREE
Sbjct:   361 QVVKVLNSEGKVIAYAKPSYTWIKGSDTSTAESGSDAEDIGSPKAIKSFSHLRLTPVREE 420

Query:   412 AKVVGKTSYAGSFSGYDEYVPMVDKAVDSSWKKQPSLRSPAAKGSLPQLPTSKTPEGIRA 471
             AK+ G+TS AGSF GYDEYVPMVDKAVD++WK +P+++  A++G+L      K  EGI+A
Sbjct:   421 AKIAGETSLAGSFPGYDEYVPMVDKAVDATWKVKPAIQRVASRGALMSPTVPKDHEGIKA 480

Query:   472 RIWAAVMAFFMMFVTLFRSVAYRVTHRIPETSTGHDLNISEVAVDANE-----KEEFRPP 526
             R+    MAF M   T FR+V    T ++P T+T         A++        KEE RPP
Sbjct:   481 RVLVMFMAFLMAVFTFFRTV----TKKLPATTTSSPAETQGNAIELGSNGEGVKEECRPP 536

Query:   527 SPSPSLTEVDLLSSVTKRLSELEEKVDTLQAKPSEMPYEKEELLHAAVCRVDALEAELIA 586
             SP P LTE DLL+ VTK+L+ELE K+ TLQ+KP+EMPYEKEELL+AAVCRVDALEAELIA
Sbjct:   537 SPVPDLTETDLLNCVTKKLTELEGKIGTLQSKPNEMPYEKEELLNAAVCRVDALEAELIA 596

Query:   587 TKKALHEALMRQEDLLAYIDRQEEAKFRKKK 617
             TKKAL+EALMRQE+LLAYIDRQEEA+F+K K
Sbjct:   597 TKKALYEALMRQEELLAYIDRQEEAQFQKMK 627
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005622 "intracellular" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006810 "transport" evidence=IEA;ISS
TAIR|locus:2136288 AT4G39170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013134 AT1G19650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018416 AT1G75370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115265 SFH12 "AT4G36490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049319 SFH3 "SEC14-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139564 COW1 "CAN OF WORMS1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136303 SEC14 "SECRETION 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042634 AT2G16380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087293 AT3G24840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00036340001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (625 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query620
smart00516158 smart00516, SEC14, Domain in homologues of a S 7e-42
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 6e-37
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 6e-33
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 3e-11
pfam13716149 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain 7e-11
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 5e-09
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information 
 Score =  148 bits (375), Expect = 7e-42
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 11/168 (6%)

Query: 152 EINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVK 211
           E+  + +Y P G  G DK+GRPV IER G+ D        T++  +RY V   EK    +
Sbjct: 1   ELELLKAYIPGGR-GYDKDGRPVLIERAGRFDLKS----VTLEELLRYLVYVLEKILQEE 55

Query: 212 FPACTIAAKRHIDSSTSILDVQGVNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPG 271
                      I+  T I D++G++ S     ++ ++ KI  D+YPE L +++IIN    
Sbjct: 56  KK------TGGIEGFTVIFDLKGLSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWF 109

Query: 272 FRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTC 319
           FR+LW  +K FLD KT  KI  +GN  + +LLE ID  +LPE LGGT 
Sbjct: 110 FRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDKEQLPEELGGTL 157

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 620
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.96
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.95
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.91
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.39
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.58
KOG4406467 consensus CDC42 Rho GTPase-activating protein [Sig 98.0
COG406475 MtrG Tetrahydromethanopterin S-methyltransferase, 83.18
PRK0102677 tetrahydromethanopterin S-methyltransferase subuni 80.96
TIGR0114970 mtrG N5-methyltetrahydromethanopterin:coenzyme M m 80.44
>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.7e-43  Score=372.20  Aligned_cols=274  Identities=46%  Similarity=0.762  Sum_probs=242.5

Q ss_pred             ccccccccCCCC--HHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCccccc
Q 007045           70 RVSSVSIEDVRD--VEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMED  147 (620)
Q Consensus        70 ~v~s~~ied~~d--~eE~~al~efRq~L~~~~~LP~~~dD~~~LLRFLrArkfDvekA~~~l~~~l~WRk~~g~d~i~~d  147 (620)
                      .++.+..+++.+  +.+.+.++++| |+..+++++...+|+++||||||||+||+++|+++|.+++.||++++.+.+..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~i~~lr-~~~~~~~l~~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~   84 (317)
T KOG1471|consen    6 MLAKVAKEELNEITESEEAVIAQLR-WLLQKPHLPNKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFED   84 (317)
T ss_pred             ccccccccccCCCcHHHHHHHHHHH-HHhhccCCCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhc
Confidence            344444444444  55677777777 888899999755555799999999999999999999999999999999999876


Q ss_pred             cchHHHHHHHhhcCcccccCCCCCCcEEEEEcCccCcchhhhcccHHHHHHHHHHHHHHHHHhhChhhhhhhcCCCCCeE
Q 007045          148 FEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSST  227 (620)
Q Consensus       148 ~~~~el~~v~k~~p~~~~G~Dk~GRPVli~rlg~~d~~kl~~~~t~~~~ir~~v~~~E~~l~~~~pacs~~a~~~i~~~t  227 (620)
                        .....++.+++|++++|+|++|+||++.+.|..+...++..+...+++++++..+|+.+..+++.|......+++|++
T Consensus        85 --~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~  162 (317)
T KOG1471|consen   85 --FEEDDELLKYYPQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIV  162 (317)
T ss_pred             --cccchhhhhhccccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeE
Confidence              344445666899999999999999999999999999999999999999999999999999999999888888999999


Q ss_pred             EEEeCCCCCCC---chHHHHHHHHHHhhcccccccccEEEEEecChHHHHHHHHHHhcCChhhhcceEEeCCCchhHHHh
Q 007045          228 SILDVQGVNFS---KNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLE  304 (620)
Q Consensus       228 vIiDl~Gls~s---k~~~~~ik~l~kilq~~YPErL~ri~IINaP~~f~~lw~lVKpFLd~kTr~KI~~lg~~~~~~L~e  304 (620)
                      +|+|++|+++.   +.....++.++.++|+|||++++++||||+|++|.++|++|||||+++|++||++++.++.+.|++
T Consensus       163 ~I~Dl~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~k  242 (317)
T KOG1471|consen  163 TIFDLKGVSLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSKDKESLLK  242 (317)
T ss_pred             EEEECCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecCCCchhhhhh
Confidence            99999999776   467899999999999999999999999999999999999999999999999999777778899999


Q ss_pred             hcCcCCCccccCCCcCcC---CCCCCccCCCCCCCCHHHHHHHhc
Q 007045          305 IIDARELPEFLGGTCNCA---DQGGCLRSDKGPWQNPEILKMVLN  346 (620)
Q Consensus       305 ~Id~s~LP~eyGGt~~~~---~~ggcl~~~~gpW~~p~~~k~~~~  346 (620)
                      +|++++||++|||+|.+.   ..++|..++.+||.++.+.+....
T Consensus       243 ~i~~~~LP~~yGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (317)
T KOG1471|consen  243 YIPPEVLPEEYGGTCGDLDDPNGGGCDLSDEGPWKEPEIKKGKQE  287 (317)
T ss_pred             hCCHhhCccccCCCccccccccCCcCccccccccccccccccccc
Confidence            999999999999999996   357799999999998877654433

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>COG4064 MtrG Tetrahydromethanopterin S-methyltransferase, subunit G [Coenzyme metabolism] Back     alignment and domain information
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional Back     alignment and domain information
>TIGR01149 mtrG N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query620
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 8e-48
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 6e-43
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 2e-42
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 1e-18
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 1e-18
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 2e-17
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 1e-09
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 4e-09
3hy5_A316 Crystal Structure Of Cralbp Length = 316 2e-05
3hx3_A316 Crystal Structure Of Cralbp Mutant R234w Length = 3 2e-04
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score =  188 bits (478), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 149/250 (59%), Gaps = 4/250 (1%)
Query: 95  LIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFEFKEIN 154
           L+ D    ER DD   +LRFL+ARKFD+  AK M+    +WRK++G DTI++DF + E  
Sbjct: 40  LLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKP 98
Query: 155 EVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPA 214
            +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R ++  V  +E     + PA
Sbjct: 99  LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPA 158
Query: 215 CTIAAKRHIDSSTSILDVQGVNFSK--NARELILRLQKIDGDNYPETLHQMFIINAGPGF 272
           C+ AA   +++S +I+D++G++ S   +    +     I  + YPE + + +IINA  GF
Sbjct: 159 CSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGF 218
Query: 273 RLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCAD-QGGCLRSD 331
              +   K FLDP T SKI +LG+ YQ +LL+ I A  LP   GG     + +GG   SD
Sbjct: 219 STAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKGGLYLSD 278
Query: 332 KGPWQNPEIL 341
            GPW++P+ +
Sbjct: 279 IGPWRDPKYI 288
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure
>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp Length = 316 Back     alignment and structure
>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query620
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 1e-120
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 1e-115
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 1e-92
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 1e-91
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 8e-72
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
 Score =  356 bits (916), Expect = e-120
 Identities = 103/274 (37%), Positives = 159/274 (58%), Gaps = 7/274 (2%)

Query: 81  DVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFG 140
           D  + +A+   R+ L+ D    ER DD   +LRFL+ARKFD+  AK M+    +WRK++G
Sbjct: 27  DSAQEKALAELRK-LLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYG 84

Query: 141 VDTIMEDFEFKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYH 200
            DTI++DF + E   +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R ++  
Sbjct: 85  TDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL 144

Query: 201 VQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVNFS--KNARELILRLQKIDGDNYPE 258
           V  +E     + PAC+ AA   +++S +I+D++G++ S   +    +     I  + YPE
Sbjct: 145 VWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPE 204

Query: 259 TLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGT 318
            + + +IINA  GF   +   K FLDP T SKI +LG+ YQ +LL+ I A  LP   GG 
Sbjct: 205 RMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGK 264

Query: 319 CNCAD-QGGCLRSDKGPWQNPEILKMVLNGGAPR 351
               + +GG   SD GPW++P+ +     G AP 
Sbjct: 265 SEVDESKGGLYLSDIGPWRDPKYIGP--EGEAPE 296
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query620
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 99.02
3peg_A290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.72
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
Probab=100.00  E-value=1e-54  Score=457.81  Aligned_cols=270  Identities=36%  Similarity=0.637  Sum_probs=246.1

Q ss_pred             ccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCccccccc
Q 007045           70 RVSSVSIEDVRDVEELQAVDAFRQSLIMDELLPERHDDYHMMLRFLKARKFDIDKAKHMWAEMLQWRKEFGVDTIMEDFE  149 (620)
Q Consensus        70 ~v~s~~ied~~d~eE~~al~efRq~L~~~~~LP~~~dD~~~LLRFLrArkfDvekA~~~l~~~l~WRk~~g~d~i~~d~~  149 (620)
                      ..+++...+ ++++|+++|++||+||.+++ ++.+.|| .+||||||||+||+++|.+||+++++||+++++|.+..++.
T Consensus        26 ~~~~g~~~~-lt~~q~~~l~~lR~~l~~~~-~~~~~dD-~~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~  102 (320)
T 3q8g_A           26 NALPGTPGN-LTKEQEEALLQFRSILLEKN-YKERLDD-STLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYE  102 (320)
T ss_dssp             TSCTTSTTC-CCHHHHHHHHHHHHHHHHTT-CCSSCSH-HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHH
T ss_pred             CCCCCCCCC-CCHHHHHHHHHHHHHHHhcC-CCCCCCH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCccccccccc
Confidence            345555555 47889999999999999988 4667777 49999999999999999999999999999999999987765


Q ss_pred             hH------HHHHHHhhcCcccccCCCCCCcEEEEEcCccCcchhhhcccHHHHHHHHHHHHHHHHHhhChhhhhhhcCCC
Q 007045          150 FK------EINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHI  223 (620)
Q Consensus       150 ~~------el~~v~k~~p~~~~G~Dk~GRPVli~rlg~~d~~kl~~~~t~~~~ir~~v~~~E~~l~~~~pacs~~a~~~i  223 (620)
                      ++      +...+.++++++++|+|++||||+|+++|++|++++++.++.+++++++++.+|.+++.+.++|+...+..+
T Consensus       103 ~~~~~~~~e~~~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~v  182 (320)
T 3q8g_A          103 NNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLI  182 (320)
T ss_dssp             HTHHHHHHHHHHHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCC
T ss_pred             cccccchhHHHHHHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCc
Confidence            54      445677899999999999999999999999999998888899999999999999999888888888888889


Q ss_pred             CCeEEEEeCCCCCCCchH--HHHHHHHHHhhcccccccccEEEEEecChHHHHHHHHHHhcCChhhhcceEEeCCCchhH
Q 007045          224 DSSTSILDVQGVNFSKNA--RELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSK  301 (620)
Q Consensus       224 ~~~tvIiDl~Gls~sk~~--~~~ik~l~kilq~~YPErL~ri~IINaP~~f~~lw~lVKpFLd~kTr~KI~~lg~~~~~~  301 (620)
                      +++++|+|++|+++++..  ..+++.+++++|+|||+||+++||||+|++|.++|+++++||+++|++||+|+++++.+.
T Consensus       183 e~~~~IiD~~g~sl~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~  262 (320)
T 3q8g_A          183 ETSCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKE  262 (320)
T ss_dssp             CCEEEEEECTTCCHHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHH
T ss_pred             ceeEEEEECCCCCHHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHH
Confidence            999999999999887654  688999999999999999999999999999999999999999999999999999888889


Q ss_pred             HHhhcCcCCCccccCCCcCcCC-CCCCccCCCCCCCCHHHHH
Q 007045          302 LLEIIDARELPEFLGGTCNCAD-QGGCLRSDKGPWQNPEILK  342 (620)
Q Consensus       302 L~e~Id~s~LP~eyGGt~~~~~-~ggcl~~~~gpW~~p~~~k  342 (620)
                      |.++||+++||++|||+++|.+ +|||+.++.|||+||++++
T Consensus       263 L~~~i~~~~LP~~yGG~~~~~~~~ggc~~~~~gpw~~~~~~~  304 (320)
T 3q8g_A          263 LLKQIPIENLPVKYGGTSVLHNPNDKFYYSDIGPWRDPRYIG  304 (320)
T ss_dssp             HHHHSCGGGSBGGGTSCBCCSSTTSCGGGBCBSGGGCTTTCC
T ss_pred             HHhhCChhhCChhhCCCCCCCCCCCCeecCCCCCCCChhhcC
Confidence            9999999999999999999976 7999999999999998875
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 620
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 1e-64
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 3e-51
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 9e-30
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 2e-22
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 3e-19
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 6e-12
d1uk5a_111 a.7.7.1 (A:) BAG-family molecular chaperone regula 8e-06
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  209 bits (532), Expect = 1e-64
 Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 5/205 (2%)

Query: 150 FKEINEVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFA 209
           + E   +  +YP  YH  DK+GRPVY E LG V+ +++ +VT+ +R ++  V  +E    
Sbjct: 1   YDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQ 60

Query: 210 VKFPACTIAAKRHIDSSTSILDVQGVNFS--KNARELILRLQKIDGDNYPETLHQMFIIN 267
            + PAC+ AA   +++S +I+D++G++ S   +    +     I  + YPE + + +IIN
Sbjct: 61  YRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIIN 120

Query: 268 AGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELPEFLGGTCNCAD-QGG 326
           A  GF   +   K FLDP T SKI +LG+ YQ +LL+ I A  LP   GG     + +GG
Sbjct: 121 APFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKGG 180

Query: 327 CLRSDKGPWQNPEILKMVLNGGAPR 351
              SD GPW++P+ +     G AP 
Sbjct: 181 LYLSDIGPWRDPKYIGP--EGEAPE 203
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query620
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 100.0
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.96
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.52
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.39
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 99.17
d1ugoa_99 BAG-family molecular chaperone regulator-5, BAG-5 80.23
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-38  Score=311.27  Aligned_cols=188  Identities=37%  Similarity=0.700  Sum_probs=174.9

Q ss_pred             HHHhhcCcccccCCCCCCcEEEEEcCccCcchhhhcccHHHHHHHHHHHHHHHHHhhChhhhhhhcCCCCCeEEEEeCCC
Q 007045          155 EVLSYYPHGYHGVDKEGRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQG  234 (620)
Q Consensus       155 ~v~k~~p~~~~G~Dk~GRPVli~rlg~~d~~kl~~~~t~~~~ir~~v~~~E~~l~~~~pacs~~a~~~i~~~tvIiDl~G  234 (620)
                      .+.++||+++||+|++||||+|+++|++|+.++++..+.+++++++++.+|.+++...+.++...+..++++++|+|++|
T Consensus         6 ~~~~~~p~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g   85 (203)
T d1auaa2           6 LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKG   85 (203)
T ss_dssp             HHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTT
T ss_pred             HHHHHCCCcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCC
Confidence            36789999999999999999999999999999999999999999999999999988777777777788999999999999


Q ss_pred             CCCCch--HHHHHHHHHHhhcccccccccEEEEEecChHHHHHHHHHHhcCChhhhcceEEeCCCchhHHHhhcCcCCCc
Q 007045          235 VNFSKN--ARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDARELP  312 (620)
Q Consensus       235 ls~sk~--~~~~ik~l~kilq~~YPErL~ri~IINaP~~f~~lw~lVKpFLd~kTr~KI~~lg~~~~~~L~e~Id~s~LP  312 (620)
                      +++++.  ...+++.+++++|++||++++++||||+|++|+++|+++++||+++|++||+|+++++.+.|.++||+++||
T Consensus        86 ~s~~~~~~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~LP  165 (203)
T d1auaa2          86 ISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP  165 (203)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSB
T ss_pred             CChHHhhhHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhhCh
Confidence            987654  367889999999999999999999999999999999999999999999999999988889999999999999


Q ss_pred             cccCCCcCcCC-CCCCccCCCCCCCCHHHHH
Q 007045          313 EFLGGTCNCAD-QGGCLRSDKGPWQNPEILK  342 (620)
Q Consensus       313 ~eyGGt~~~~~-~ggcl~~~~gpW~~p~~~k  342 (620)
                      .+|||+|+|++ .|+|+..+.|||+||++++
T Consensus       166 ~~~GG~~~~~~~~g~~~~~~~~~~~~p~~~~  196 (203)
T d1auaa2         166 VKFGGKSEVDESKGGLYLSDIGPWRDPKYIG  196 (203)
T ss_dssp             GGGTSCBCCCGGGCCSTTCCCSGGGCGGGCC
T ss_pred             HHhCCCCcCCCCCCCccccCCCCCCChhhcC
Confidence            99999999975 5999999999999998763
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ugoa_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-5, BAG-5 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure