Citrus Sinensis ID: 007071

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------62
Protein Sequence
MVAAISDENPTTSSRPPLLPSEKDNARSASGVNGTRKPRGRLVSSRYLSPSPSSSSSSSSTTAAATAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGSSPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKAKATPERRRGTPVRDQPWPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLNQSLIENESRLNLDLDNAKQNKDGNLLVSESCDLVTSDDTDSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEccHHHHHHcccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mvaaisdenpttssrppllpsekdnarsasgvngtrkprgrlvssrylspspsssssssstTAAATAkshsqsqrfsspllsrstnssnlqstfpalgpkrsqsvdrrrpvtgssprattpvpsskqsqeLSTATKMLITSTrslsvsfqgeafslpvsktkakatperrrgtpvrdqpwpgrsrqgnpslsrsldcsvegkkfvgfgSGAVAKSLNQSLIENesrlnldldnakqnkdgnllvsescdlvtsddtdsvssgstntsgvpesggALASRMKNGARGIIVSARFWQETNSRLRrlqdpgsplstspgsrtsnpskflqskrfssdsavstpprtmaspirganrpsspnkswntpcmspsrgipsparvrngvggilsgnssntpsilsfsvdlkrgkmgedrIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIqrncvtttssltarv
Flexible Loop (DISEMBL)
mvaaisdenpttssrppllpsekdnarsasgvngtrkprgrlvssrylspspssssssssTTAAATAkshsqsqrfsspllsrstnssnlqstfpalgpkrsqsvdrrrpvtgssprattpvpsskqsqelSTATKMLITSTRSLSvsfqgeafslpvsktkakatperrrgtpvrdqpwpgrsrqgnpslsrSLDCSVEGKKFVGFGSGAVAKSLNQSLIENESRLNLDLDNAKQNKDGNLLVSESCDLVtsddtdsvssgstntsgvpesggALASRMKNGARGIIVSARFWQETNSRLrrlqdpgsplstspgsrtsnpskflqskrfssdsavstpprtmaspirganrpsspnkswNTPCMSPSRGIPSPARVRNGVGGilsgnssntpsiLSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKdcslrthiiqrncvtttssltarv
Low Complexity Region (SEG)
MVAAISDENpttssrppllpsEKDNARSASGVNGTRKPRGRLVssrylspspssssssssttaaatakshsqsQRFsspllsrstnssnlqstFPALGPKRSQSVDRRRPVTGSSPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKAKATPERRRGTPVRDQPWPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLNQSLIENESRLNLDLDNAKQNKDGNLLVSESCDLvtsddtdsvssgstntsgvPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSvtlkriklllvkkklkltsilkGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV
Disordered region (IsUnstruct)
**********************************************************************************************************************************************************************************************************KFVGFGSGAV************************************************************************RGIIVSARFWQ*****************************************************************************************************LSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTT********
Disordered Region (DISOPRED)
**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************LRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCV**********
Disordered Region (DISEMBL)
***********************************RKPRGRLVSS*********************************************QSTFPA*************************************ATKMLITSTRSLSVSFQGEAFSLPV*************************************DCSVEGKKFVGFGSGAVAKSLNQSLIENESRLNLDLDNAKQNKDGNLLVSESCDL***********************GALASRMKNGARGIIVSARFWQETNSRLRR*****************************************ASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVT*********
Disordered Region (DISPRO)
**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************FSVDL*****GEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCV**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVAAISDENPTTSSRPPLLPSEKDNARSASGVNGTRKPRGRLVSSRYLSPSPSSSSSSSSTTAAATAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGSSPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKAKATPERRRGTPVRDQPWPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLxxxxxxxxxxxxxxxxxxxxxKDGNLLVSESCDLVTSDDTDSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	619
255573137	634	conserved hypothetical protein [Ricinus	0.964	0.941	0.642	0.0
449438327	667	PREDICTED: uncharacterized protein LOC10	0.925	0.859	0.610	0.0
224056236	651	predicted protein [Populus trichocarpa]	0.959	0.912	0.615	0.0
225428965	639	PREDICTED: uncharacterized protein LOC10	0.914	0.885	0.576	1e-175
356574305	625	PREDICTED: uncharacterized protein LOC10	0.917	0.908	0.568	1e-172
224103731	606	predicted protein [Populus trichocarpa]	0.909	0.929	0.634	1e-170
356536117	613	PREDICTED: uncharacterized protein LOC10	0.919	0.928	0.565	1e-164
18402829	659	uncharacterized protein [Arabidopsis tha	0.961	0.902	0.548	1e-159
225458810	743	PREDICTED: uncharacterized protein LOC10	0.948	0.790	0.551	1e-157
30685396	644	uncharacterized protein [Arabidopsis tha	0.936	0.900	0.537	1e-155

>gi|255573137|ref|XP_002527498.1| conserved hypothetical protein [Ricinus communis] gi|223533138|gb|EEF34896.1| conserved hypothetical protein [Ricinus communis]

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/655 (64%), Positives = 485/655 (74%), Gaps = 58/655 (8%)

Query: 1   MVAAISDEN---PTTSSRPPLLPSEKDNARSASGVNGTRKPRGRLVSSRYLSPSPSSSSS 57
           MVAAIS +N   P    RPPLLPSEKDNA   S     RKPRG+ V SRYLSPSPSSS++
Sbjct: 2   MVAAISTDNAKTPNNPRRPPLLPSEKDNAHVQS-----RKPRGKQVPSRYLSPSPSSSTT 56

Query: 58  SSSTTAAATAKSHSQS---QRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGS 114
           ++STT   ++ S S S   +RF SPLLSRSTNS +         PKRSQSVDR+RPV   
Sbjct: 57  TTSTTTTTSSSSCSSSSVPKRFPSPLLSRSTNSFST--------PKRSQSVDRKRPVV-- 106

Query: 115 SPRATTPVPSSKQSQ--ELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKA--------- 163
           S R  TP P +KQ    E+S AT+MLITSTRSLSVSFQGEAFSLP+SK KA         
Sbjct: 107 SQRPVTPNPEAKQGNVSEMSAATRMLITSTRSLSVSFQGEAFSLPISKAKAVSSSPNVTR 166

Query: 164 KATPERRRGTPVRDQP----------WPGRSRQGN-------PSLSRSLDCSVEGKKFVG 206
           K TPERR+ TPVRDQ           WPGRSR GN       PSLSRS DCSV G +   
Sbjct: 167 KVTPERRKSTPVRDQGENSRPLDQHRWPGRSRGGNLALNERNPSLSRSFDCSVGGDEKRV 226

Query: 207 FGSGAVA-KSLNQSLIENESRLNLDLDNAKQNKDGNLLVSESCDLVTSDDTDSVSSGSTN 265
            GSG ++ KSL QS+I +E RL+LDL NAK+N D N  VS+S   VT D T S S   ++
Sbjct: 227 MGSGFMSVKSLQQSMIVDERRLSLDLGNAKRNPDVNSSVSDS--FVTGDLTASDSDSVSS 284

Query: 266 TSGVP-ESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSK 324
            S    +  G+  SR K G RGI VSARFWQETNSRLRRLQDPGSPLSTSP  RTS  SK
Sbjct: 285 GSTSGLQDFGSGISRAKTGPRGIAVSARFWQETNSRLRRLQDPGSPLSTSPNPRTSISSK 344

Query: 325 FLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGG 384
            +QSKRFSSD+ V++P    +SPIRGA RP+SP+K W     SPSRGI SP+R     G 
Sbjct: 345 TIQSKRFSSDAPVASPRTFGSSPIRGATRPASPSKLWTHSASSPSRGISSPSR-----GR 399

Query: 385 ILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQ 444
            +S N S+ PSILSF+VDL+RGKMGEDRI DAHMLRLL+N YLQWRFVNARADATF VQ+
Sbjct: 400 PMSSNLSSMPSILSFAVDLRRGKMGEDRIGDAHMLRLLYNHYLQWRFVNARADATFFVQR 459

Query: 445 LNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTN 504
           +NAEKN+WNAWVTISELR+SVTLKR+KLLL+++KLKLTSILKGQ   LEEW+LLD+DH+ 
Sbjct: 460 VNAEKNLWNAWVTISELRHSVTLKRVKLLLLRQKLKLTSILKGQITCLEEWSLLDRDHST 519

Query: 505 SLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSL 564
           SL GATEALKASTLRLP+VGK IADVQNLKDA+ SA+DVM AMASSICLLSSK+E +NSL
Sbjct: 520 SLEGATEALKASTLRLPIVGKTIADVQNLKDAVGSAVDVMHAMASSICLLSSKMEEINSL 579

Query: 565 TAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV 619
            AEL++VTAKE  LLEQCKDF STL+A+Q+KDCSLRTHIIQ N + TTS+LT RV
Sbjct: 580 VAELVNVTAKEKFLLEQCKDFLSTLAAMQVKDCSLRTHIIQLNRLPTTSNLTTRV 634

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438327|ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215899 [Cucumis sativus]

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/642 (61%), Positives = 473/642 (73%), Gaps = 69/642 (10%)

Query: 14  SRPPLLPSEKDNARSASGVNGTRKPRGRLVSSRYLSPSPSSSSSSSSTTAAATAKSHSQS 73
           +RPPLLPSE+DN     GV   RKPRGR V SRY+S      S S+ST+ ++T  S + S
Sbjct: 35  ARPPLLPSERDN-----GVL-QRKPRGRQVPSRYMS-----PSPSTSTSTSSTTSSSASS 83

Query: 74  QRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGSSPRATTPVPSSKQ--SQEL 131
           +RF SPLLSRSTN +   +  P+ GPKRSQSVDRRR  T   PR+ TPV  S+   + + 
Sbjct: 84  RRFPSPLLSRSTNLTPASTPLPSSGPKRSQSVDRRRTTT---PRSITPVLDSRHGNATDS 140

Query: 132 STATKMLITSTRSLSVSFQGEAFSLPVSKTKAKATP-----------ERRRGTPVRDQP- 179
           S A K+L+TSTRSLSVSFQGEAFSLP+SKTKA ATP           ERRR TP+RD+  
Sbjct: 141 SAAAKLLVTSTRSLSVSFQGEAFSLPISKTKATATPSLSNARKGSTPERRRATPLRDKSD 200

Query: 180 ----------------WPGRSR----QGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLNQS 219
                           WP R+R    +GNP LSRS DC  E KK  G GSG V ++L Q+
Sbjct: 201 GSGVQVENSKLLDQHRWPARNRHANLEGNP-LSRSFDCGGEQKKVNGIGSGMVVRALQQT 259

Query: 220 LIEN------ESRLNLDLDNA------KQNKDGNLLVSESC--DLVTSDDTDSVSSGSTN 265
           + ++      + RL+LDL+++      +QN D + +   S   DL TSD     S  ++ 
Sbjct: 260 ISDDSRRASFDGRLSLDLNSSELIKAVRQNPDADSVNESSVPSDLTTSDTDSVSSGSTSG 319

Query: 266 TSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSKF 325
                +  G++A + +NG RGI+VSARFWQETNSRLRRL DPGSPLSTSPG+R   PSKF
Sbjct: 320 V----QDCGSVA-KGRNGPRGIVVSARFWQETNSRLRRLHDPGSPLSTSPGARVGAPSKF 374

Query: 326 LQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGI 385
            QSKRFS+D  +S+P RTMASPIRG  RP SP+K W +   SPSRGI SP+R RNGVGG 
Sbjct: 375 SQSKRFSNDGPLSSP-RTMASPIRGGTRPPSPSKLWTSSVSSPSRGISSPSRTRNGVGGS 433

Query: 386 LSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQL 445
           L  NS +TPSILSFSVD++RGKMGEDRIVDAH+LRL HNRYLQWRFVNARADATFM+Q+L
Sbjct: 434 LVSNSISTPSILSFSVDIRRGKMGEDRIVDAHVLRLHHNRYLQWRFVNARADATFMLQRL 493

Query: 446 NAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNS 505
           NAE+N+WNAWVTISELR++VTLKRIKLLL+++KLKLTS+LKGQ  YLEEWALLD+DH++S
Sbjct: 494 NAERNVWNAWVTISELRHTVTLKRIKLLLLRQKLKLTSVLKGQISYLEEWALLDRDHSSS 553

Query: 506 LLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLT 565
           +LGATEALKASTLRLPVVGKAIAD+QNLKDA+ SA+DVMQAMASSIC LSSKVE  NS+ 
Sbjct: 554 MLGATEALKASTLRLPVVGKAIADIQNLKDAVGSAVDVMQAMASSICSLSSKVEETNSVV 613

Query: 566 AELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRN 607
           AEL+ VTAKE  LL+QC+DF STL+A+Q+KDCSLRTHI+Q N
Sbjct: 614 AELVKVTAKERILLQQCEDFLSTLAAMQVKDCSLRTHILQLN 655

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056236|ref|XP_002298769.1| predicted protein [Populus trichocarpa] gi|222846027|gb|EEE83574.1| predicted protein [Populus trichocarpa]

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/655 (61%), Positives = 478/655 (72%), Gaps = 61/655 (9%)

Query: 6   SDENPTTSSRPPLLPSEKDNARSASGVN-GTRKPRGRLVSSRYLSPSPSSSSSSSSTTAA 64
           +D+ P  + RPPLLPS KD  ++    +  TRKPRG+ V SRYLSPSPS+S+++++TT  
Sbjct: 17  TDKTPNLT-RPPLLPSGKDQQQNNGSTHIATRKPRGKQVPSRYLSPSPSTSTTTTTTTTT 75

Query: 65  ATAKSHSQS--QRFSSPLLSRSTNS--SNLQSTF---PAL-GPKRSQSVDRRRPVTGSSP 116
           +++ S S S  +R  SPLLSRSTNS  S+  ST    P L G KRSQSVDRRRPVT S  
Sbjct: 76  SSSSSSSSSFPKRLPSPLLSRSTNSGTSHTPSTTTASPFLSGSKRSQSVDRRRPVTSS-- 133

Query: 117 RATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKA----------KAT 166
           R TTP P  + + E+S ATKMLITSTRSLSVSFQGEAFSLP+SK K+          KAT
Sbjct: 134 RETTPNP--QGNAEMSAATKMLITSTRSLSVSFQGEAFSLPISKAKSVTPPQNNVARKAT 191

Query: 167 PERRRGTPVRDQP----------WPGRSRQGNPS-----LSRSLDCSV-----EGKKFVG 206
           PE+RR TPV DQ           WPGRSR+GN       LSRSLDCSV       K+ VG
Sbjct: 192 PEKRRATPVGDQGENSRPVDHHRWPGRSREGNLKERNQLLSRSLDCSVVVGCGGDKRVVG 251

Query: 207 FGSGAVAKSLNQSLIENESR-LNLDLDN-AKQNKDGNLLVSESCDLVTSDDTDSVSSGST 264
            G   V KSL QS++  E R L+LDL N AKQN D  + V+ES     S   D  +S S 
Sbjct: 252 SGLMGV-KSLQQSMMVGEGRRLSLDLGNIAKQNPD-TISVNES-----SYTGDLTASDSD 304

Query: 265 NTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSK 324
           + S    SG     + K GARGI VSARFWQETNSR+RRLQDPGSPLSTSPGSR     K
Sbjct: 305 SVSSGSTSGVTEIGKWKTGARGIAVSARFWQETNSRMRRLQDPGSPLSTSPGSRMGVSPK 364

Query: 325 FLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGG 384
            +QSKRFSSD  +++P    ASPIRGA RP+SP K W +   SPSRG+ SP+RVR     
Sbjct: 365 AIQSKRFSSDGPLASPRMMAASPIRGATRPASPGKLWTSSFSSPSRGMSSPSRVRP---- 420

Query: 385 ILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQ 444
                SS+TPSILSFSVDL+RGKMGEDRIVDAHMLRLL+NRYLQWRFVNARADATFMVQ+
Sbjct: 421 ----MSSSTPSILSFSVDLRRGKMGEDRIVDAHMLRLLYNRYLQWRFVNARADATFMVQR 476

Query: 445 LNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTN 504
           L+AEKN+WNAWVTISELR+SVTL+RIKL+L+++KLKLTSILK Q  +LEEW+LLD+DH++
Sbjct: 477 LSAEKNLWNAWVTISELRHSVTLRRIKLILLRQKLKLTSILKRQIAHLEEWSLLDRDHSS 536

Query: 505 SLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSL 564
           SL GATEALKASTLRLPVVGKA+ADVQNLK+ + SA+DVMQAMASSIC LSSKVE+MNSL
Sbjct: 537 SLEGATEALKASTLRLPVVGKAVADVQNLKEVVGSAVDVMQAMASSICSLSSKVEDMNSL 596

Query: 565 TAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV 619
            A+L++VTAKE  +LEQCK F S L+ +Q+ DCS+RTH +Q N +  TSSLT  V
Sbjct: 597 VADLLNVTAKERRMLEQCKGFLSALAIVQVTDCSMRTHTLQLNRLPNTSSLTTHV 651

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428965|ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]

 Score =  623 bits (1606), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 383/664 (57%), Positives = 461/664 (69%), Gaps = 98/664 (14%)

Query: 1   MVAAISDE------NPTTSS-----------RPPLLPSEKDNARSASGVNGTRKPRGRLV 43
           MVAAIS+       NP  SS           RPPLLPSEKDN          ++P+ R V
Sbjct: 1   MVAAISEAASTNRPNPKASSHTHDTHLRNPARPPLLPSEKDNGLV------PKRPKSRQV 54

Query: 44  SSRYLSPSPSSSSSSSSTTAAATAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGPK--- 100
           SSRY+SPSPS+S+S                +R SSPL+SRSTNS+   +  P        
Sbjct: 55  SSRYMSPSPSTSASVP--------------RRCSSPLISRSTNSTASSTPLPVAASSTSS 100

Query: 101 ---RSQSVDRRRPVTGSSPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLP 157
              RS SVDRRRP T +        P S  + E+S A+++L TSTRSLSVSFQGEAFSLP
Sbjct: 101 SFPRSHSVDRRRPATAA--------PGS--AGEVSAASRLLFTSTRSLSVSFQGEAFSLP 150

Query: 158 VSKTKA--------KATPERRRGTPVR-----DQ-----PWPGRSRQGNPSLSRSLDCSV 199
           +SK KA        K TPERR+ TPVR     DQ     PWPGRSR  N  L+RS DCSV
Sbjct: 151 ISKAKAAPNLGNVRKGTPERRKPTPVRGSGAVDQVENSRPWPGRSRSVN-VLARSFDCSV 209

Query: 200 EGKKFVGFGSGAVAKSLNQSLIEN------ESRLNLDLDNA------KQNKDGNLLVSES 247
           + KK +G  SG V  S  QS+I+       + RL+LDL NA      KQ+ DGN     S
Sbjct: 210 DRKKSIG--SGIVVGSFQQSMIDESRRASFDGRLSLDLGNAELLKVTKQDPDGNSANDSS 267

Query: 248 C--DLVTSDDTDSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQ 305
              DL T+ DTDSVSSGST  SG+ E  G   S  ++G RGI+VSARFWQETNSRLRRLQ
Sbjct: 268 VPTDL-TASDTDSVSSGST--SGLQECAGV--SGRRSGPRGIVVSARFWQETNSRLRRLQ 322

Query: 306 DPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNK--SWNT 363
           DPGSPLSTSPGSR +  +KF+QSK+F SD+ +++P RTM SPIRGA RP+SP+K  + + 
Sbjct: 323 DPGSPLSTSPGSRMAVAAKFIQSKKFPSDNPLASP-RTMMSPIRGATRPASPSKLMASSM 381

Query: 364 PCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLH 423
           P  SP R   SPAR+RN V   LS +SS  PSILSFSVD++RGKMGE+RIVDAH+LRLL+
Sbjct: 382 PVSSPIRA-SSPARLRNAVASPLSSSSSIAPSILSFSVDVRRGKMGENRIVDAHLLRLLY 440

Query: 424 NRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTS 483
           NR+LQWRFVNARADA  +VQ++ AE+N+WNAW+TIS+LR+SVT KR+KL  +++KLKLTS
Sbjct: 441 NRHLQWRFVNARADAALLVQRMRAERNLWNAWITISKLRDSVTSKRMKLQWLRRKLKLTS 500

Query: 484 ILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDV 543
           ILKGQ  YLEEWALL++DH++SL GA EALKASTLRLPVVG AIAD+Q+LKDA+ SA+DV
Sbjct: 501 ILKGQMAYLEEWALLERDHSSSLHGAIEALKASTLRLPVVG-AIADIQSLKDAVGSAVDV 559

Query: 544 MQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHI 603
           MQAMASSIC L SKVE MNSL  E+  VTAKE ALLEQC+DF STL+A+Q+K  SLRTHI
Sbjct: 560 MQAMASSICSLLSKVEEMNSLVVEIADVTAKERALLEQCRDFLSTLAAMQVKYSSLRTHI 619

Query: 604 IQRN 607
           +Q N
Sbjct: 620 LQLN 623

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574305|ref|XP_003555289.1| PREDICTED: uncharacterized protein LOC100815206 [Glycine max]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 384/676 (56%), Positives = 464/676 (68%), Gaps = 108/676 (15%)

Query: 1   MVAAISDENPTTSSRPPLLPSEKDNARSASGVNGT--RKPRGRLVSSRYLS----PSPSS 54
           MVAAIS E+P TSS                  NGT  R+P+GR VSSRY+S    PSPS 
Sbjct: 1   MVAAIS-EDPLTSS------------------NGTIPRRPKGRQVSSRYMSHSPSPSPSP 41

Query: 55  SSSSSSTTAAATAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGS 114
           SS++++TT+ +T+ + S S+RF SPLLS S+NSS        L PKRSQSVDRRRP    
Sbjct: 42  SSTTTTTTSTSTSTTTSSSRRFPSPLLSHSSNSST------PLVPKRSQSVDRRRP---- 91

Query: 115 SPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKAKA--------- 165
             R  TP+P          A K+L+TSTRSLSVSFQGEAFSLPVSKTKA A         
Sbjct: 92  --RPATPLPE---------AAKLLVTSTRSLSVSFQGEAFSLPVSKTKAAAATPPPRKAA 140

Query: 166 TPERRRGTPVR-------DQP-WPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLN 217
           TPERRR TPV+       DQ  WP R+R+ +  LS+S+D S + KK +G G G V ++L 
Sbjct: 141 TPERRRATPVKGENSRPVDQHRWPARTRRVD-HLSKSVDVS-DKKKVIGNGFGKVVRALQ 198

Query: 218 QSLI-ENESR---LNLDLDNAKQNKDGNLLV----------------------------S 245
           QS++ E E R    +     +       LL                             S
Sbjct: 199 QSMVVEGEKRRASFDGLGGLSLDLGKAELLKGNSNSNSNANNHSNNDGGGGGGNLVNKSS 258

Query: 246 ESCDLVTSDDTDSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQ 305
            + DL T+ DTDSVSSGST  SG  ES GA  ++     RGI+VSARFWQETNSRLRRLQ
Sbjct: 259 LASDL-TASDTDSVSSGST--SGAHESSGA--AKGTKEPRGIVVSARFWQETNSRLRRLQ 313

Query: 306 DPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGA--NRPSSPNKSWNT 363
           DPGSPLSTSP SR   P++  Q KR++SD  + +P RTMASP+RG    RP+SP+K W  
Sbjct: 314 DPGSPLSTSPASRIGVPNRNAQLKRYNSDGPMLSP-RTMASPVRGNVNARPASPSKLWA- 371

Query: 364 PCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLH 423
              SPSRG+ SPARVR+ V   ++  SSNTPSILSFS D++RGK+GEDRI DAH LRLL+
Sbjct: 372 -GSSPSRGV-SPARVRSTVASSINSGSSNTPSILSFSADVRRGKIGEDRIFDAHTLRLLY 429

Query: 424 NRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTS 483
           NRY+QWRFVNARADATFMVQ+LNAE+++WNAWVTISELR+SV LKRIKL+L+++KLKLTS
Sbjct: 430 NRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLVLLRQKLKLTS 489

Query: 484 ILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDV 543
           ILKGQ  YLEEWALLD+DH++SLLGATEALKASTLRLPVV KAIADV NLKDA+ SA+DV
Sbjct: 490 ILKGQISYLEEWALLDRDHSSSLLGATEALKASTLRLPVVEKAIADVPNLKDALGSAVDV 549

Query: 544 MQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHI 603
           MQAMASSI  LSSKVE  N L AE++ VT+KE  LLE CK+F S+L+A+Q+KDCSLRTH+
Sbjct: 550 MQAMASSIYSLSSKVEETNCLVAEILKVTSKERLLLEHCKEFLSSLAAMQVKDCSLRTHM 609

Query: 604 IQRNCVTTTSSLTARV 619
           +Q + V T+S LT RV
Sbjct: 610 LQLSRVPTSSCLTTRV 625

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103731|ref|XP_002313172.1| predicted protein [Populus trichocarpa] gi|222849580|gb|EEE87127.1| predicted protein [Populus trichocarpa]

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 398/627 (63%), Positives = 469/627 (74%), Gaps = 64/627 (10%)

Query: 36  RKPRGRLVSSRYLSPSPSSSSSSSSTTAAATAKSHSQS----QRFSSPLLSRSTNSSNLQ 91
           RKPRG+ V SRYLSPSPS+S+S+++TT   T+ S S S    +RF+SPLLSRSTNS  L 
Sbjct: 1   RKPRGKQVPSRYLSPSPSTSTSTTTTTTTTTSSSSSSSSSFPRRFASPLLSRSTNSGPLH 60

Query: 92  S-------TFPALGPKRSQSVDRRRPVTGSSPRATTPVPSSKQSQELSTATKMLITSTRS 144
           +       + P+ G KRSQSVDRRRPVT S P  TTP P  + + E+S ATKMLITSTRS
Sbjct: 61  TPLTTTTCSLPS-GSKRSQSVDRRRPVTSSRP--TTPNPQ-RTATEISAATKMLITSTRS 116

Query: 145 LSVSFQGEAFSLPVSKTKA----------KATPERRRGTPVRDQP----------WPGRS 184
           LSVSFQGEAFSLP+SK K+          KATPERRR TPVRDQ           WPGRS
Sbjct: 117 LSVSFQGEAFSLPISKAKSVTPPQNNVVRKATPERRRATPVRDQGENSRPMDQHRWPGRS 176

Query: 185 RQGN-----PSLSRSLDCSV-----EGKKFVGFGSGAVAKSLNQSLIENESRLNLDLDNA 234
           R+GN     P LSRSLDCSV       ++ +G G   V KSL QS+++   RL+LDL NA
Sbjct: 177 REGNLKERNPLLSRSLDCSVVVGGGGDRRVIGSGFFGV-KSLQQSIVDEGRRLSLDLGNA 235

Query: 235 KQNKDGNLLVSESCDLVTSDDT--DSVSSGSTNTSGVPESGGALASRMKNGARGIIVSAR 292
           +QN D  + V+ES    T D T  DS S  S +TSGVPE G     + K   RGI VSAR
Sbjct: 236 RQNTD-TISVNESS--FTGDLTASDSDSVSSGSTSGVPEIG-----KRKTAPRGITVSAR 287

Query: 293 FWQETNSRLRRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGAN 352
           FWQETNSRLRRLQDPGSPLSTSPGSR     K +QSKRFSSD  +S+P    ASPIRGA 
Sbjct: 288 FWQETNSRLRRLQDPGSPLSTSPGSRMGVSPKAIQSKRFSSDGPLSSPRMLAASPIRGAT 347

Query: 353 RPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDR 412
           RP+SP+K W T   SPSRG+ SP+         +   SS++PSILSFSVDL+RGKMGEDR
Sbjct: 348 RPASPSKLWTTSASSPSRGMSSPS--------RVRSMSSSSPSILSFSVDLRRGKMGEDR 399

Query: 413 IVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKL 472
           IVDAH+LRLL+NRYLQWRFVNAR DATFMVQ+LNAEKN+WNAWVTISELR+SVTL+R+KL
Sbjct: 400 IVDAHVLRLLYNRYLQWRFVNAREDATFMVQRLNAEKNLWNAWVTISELRHSVTLRRVKL 459

Query: 473 LLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQN 532
           LL+++KLKLTSILKGQ  +LEEW+ LD+ H++SL GATEALKASTLRLPVVGK +ADVQN
Sbjct: 460 LLLRQKLKLTSILKGQIAHLEEWSHLDRGHSSSLEGATEALKASTLRLPVVGKTVADVQN 519

Query: 533 LKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSAL 592
           LKDA+ SA+DVMQAMASSIC LSSKVE+MNSL AEL++VTAKE  +L+QCKDF STL+ +
Sbjct: 520 LKDAVGSAVDVMQAMASSICSLSSKVEDMNSLVAELVNVTAKERHMLQQCKDFLSTLATV 579

Query: 593 QIKDCSLRTHIIQRNCVTTTSSLTARV 619
           Q+KDCS+RTHI+Q N + TT+SLT RV
Sbjct: 580 QVKDCSVRTHILQLNRLPTTTSLTTRV 606

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536117|ref|XP_003536586.1| PREDICTED: uncharacterized protein LOC100808920 [Glycine max]

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 375/663 (56%), Positives = 457/663 (68%), Gaps = 94/663 (14%)

Query: 1   MVAAISDENPTTSSRPPLLPSEKDNARSASGVNGT--RKPRGRLVSSRYLS----PSPSS 54
           MVAAIS E+P TSS                  NGT  R+P+GR VSSRY+S    PS ++
Sbjct: 1   MVAAIS-EDPLTSS------------------NGTIPRRPKGRQVSSRYMSHSPSPSSTT 41

Query: 55  SSSSSSTTAAATAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGS 114
           +++++++T+ +T+ + S S+RF SPLLS STNSS        L PKRSQSVDRRRP    
Sbjct: 42  TTTTTTSTSTSTSTTSSSSRRFPSPLLSHSTNSST------PLLPKRSQSVDRRRP---- 91

Query: 115 SPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKAK---------A 165
             R  TP+P          A K+L+TSTRSLSVSFQGEAFSLPVSKTKA          A
Sbjct: 92  --RPATPLPE---------AAKLLVTSTRSLSVSFQGEAFSLPVSKTKAASATPTPRKAA 140

Query: 166 TPERRRGTPVR-------DQP-WPGRSRQGNPSLSRSLDC----SVEGKKFVGFGSGAVA 213
           TPERRR TPV+       DQ  WP R+R  +  LS+S+D             G G G V 
Sbjct: 141 TPERRRATPVKGENSRPADQHRWPARTRHVD-HLSKSVDIIDNKKKVVGNGNGNGFGKVV 199

Query: 214 KSLNQSLI-ENESR--------------LNLDLDNAKQNKDGNLLVSESCDLVTSDDTDS 258
           ++L QS++ E E R                 +L     N + +   S + DL T+ DTDS
Sbjct: 200 RALQQSMVVEGEKRRASFDGLGGLSLDLGKAELLKGNINANNHNKSSLASDL-TASDTDS 258

Query: 259 VSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSR 318
           VSSGST  SG  +S GA  ++     RGI+VSARFWQETNSRLRRLQDPGSPLSTSP SR
Sbjct: 259 VSSGST--SGAHDSSGA--AKGTKEPRGIVVSARFWQETNSRLRRLQDPGSPLSTSPASR 314

Query: 319 TSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGA--NRPSSPNKSWNTPCMSPSRGIPSPA 376
              P++  Q KR++SD  + +P RTMASP+RG    RP+SP+K W     SPSRG+ SPA
Sbjct: 315 IGVPNRNAQLKRYNSDGPMLSP-RTMASPVRGNVNARPASPSKLW--AGSSPSRGV-SPA 370

Query: 377 RVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARA 436
           RVR+ V   ++  S NTPSILSFS D++RGK+GEDRI DAH LRLL+NRY+QWRFVNARA
Sbjct: 371 RVRSTVASSINSGSGNTPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARA 430

Query: 437 DATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWA 496
           DATFMVQ+LNAE+++WNAWVTISELR+SV LKRIKL+L+++KLKLTSILKGQ  YLEEWA
Sbjct: 431 DATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLVLMRQKLKLTSILKGQISYLEEWA 490

Query: 497 LLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSS 556
           LLD+DH+ SLLGATEALKASTLRLPVV KAIADV NLKDA+ SA+DVMQAMASSI  LSS
Sbjct: 491 LLDRDHSTSLLGATEALKASTLRLPVVEKAIADVPNLKDALGSAVDVMQAMASSIYSLSS 550

Query: 557 KVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLT 616
           KVE  N L AE++ VT+KE  LLE CK+F S+L+A+Q+KDCSLRTH++Q + V T+S LT
Sbjct: 551 KVEETNCLVAEILKVTSKERFLLEHCKEFLSSLAAMQVKDCSLRTHMLQLSRVPTSSCLT 610

Query: 617 ARV 619
            RV
Sbjct: 611 TRV 613

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18402829|ref|NP_564558.1| uncharacterized protein [Arabidopsis thaliana] gi|15028145|gb|AAK76696.1| unknown protein [Arabidopsis thaliana] gi|24030506|gb|AAN41399.1| unknown protein [Arabidopsis thaliana] gi|332194367|gb|AEE32488.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 374/682 (54%), Positives = 468/682 (68%), Gaps = 87/682 (12%)

Query: 1   MVAAISDENPTTSSRPPLLPSEKDNARSASGVNGTRKPRGRLVSSRYLSPSPSSSSSSSS 60
           + AAIS  +P     PP     +D  +S +   G R+PRG+ V SRYLSPSPS S SS++
Sbjct: 2   VAAAISTTDPRN---PP-----RDRPQSLTNNGGQRRPRGKQVPSRYLSPSPSHSVSSTT 53

Query: 61  TTAAATAKSHSQ------------SQRFSSP--LLSRST-NSSNLQSTFPALGPKRSQSV 105
           TT   T  + S             S+R+ SP  LLSRST NS++     P+L PKRSQSV
Sbjct: 54  TTTTTTTTTTSSSSSSSSSAILRTSKRYPSPSPLLSRSTTNSASNSIKTPSLLPKRSQSV 113

Query: 106 DRRRPVTGSSPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKA-- 163
           DRRRP   S    T          E+S ATKMLITSTRSLSVSFQGEAFSLP+SK K   
Sbjct: 114 DRRRPSAVSVTVGT----------EMSAATKMLITSTRSLSVSFQGEAFSLPISKKKETT 163

Query: 164 -------KATPERRRGTPVRDQP----------WPGRSRQGNP------SLSRSLDCSVE 200
                  K+TPERRR TPVRDQ           WPG SR+GN       SLSRSLDC  +
Sbjct: 164 STPVSHRKSTPERRRSTPVRDQRENSKPVDQQRWPGASRRGNSESVVPNSLSRSLDCGSD 223

Query: 201 GKKFVGFGSGAVAKS-LNQSLIEN------ESRLNLDL----------DNAKQNKDGNLL 243
             K    GSG V +S L+ S+I+         RL+LDL          D+ ++  +  L 
Sbjct: 224 RGKL---GSGFVGRSMLHNSMIDESPRVSVNGRLSLDLGGRDEYLDIGDDIQRRPNNGLT 280

Query: 244 VSESCDLVTSDDTDSVSSGSTNTSGVPESGGAL---ASRMKNGARGIIVSARFWQETNSR 300
            S SCD  T+ DTDSVSSGSTN  GV E G  +    S+ K+  R I+ SARFWQETNSR
Sbjct: 281 SSVSCDF-TASDTDSVSSGSTN--GVQECGSGVNGEISKSKSLPRNIMASARFWQETNSR 337

Query: 301 LRRLQDPGSPLSTSPGSRTSN-PSKFLQSKRFSSDSAVSTPPRTMASPIRG-ANRPSSPN 358
           LRRLQDPGSPLS+SPG +TS+  SKF  SKRFSSD+   + PR MASP+RG A R +SP+
Sbjct: 338 LRRLQDPGSPLSSSPGLKTSSISSKFGLSKRFSSDAVPLSSPRGMASPVRGSAIRSASPS 397

Query: 359 KSWNTPCMSPSRGIPSPARVRNGVGGILSG-NSSNTPSILSFSVDLKRGKMGEDRIVDAH 417
           K W T   SP+R + SP+R RNGV   ++  N +NTPSILSFS D++RGK+GEDR++DAH
Sbjct: 398 KLWATTTSSPARALSSPSRARNGVSDQMNAYNRNNTPSILSFSADIRRGKIGEDRVMDAH 457

Query: 418 MLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKK 477
           +LRLL+NR LQWRFVNARAD+T MVQ+LNAEKN+WNAWV+ISELR+SVTLKRIKLLL+++
Sbjct: 458 LLRLLYNRDLQWRFVNARADSTVMVQRLNAEKNLWNAWVSISELRHSVTLKRIKLLLLRQ 517

Query: 478 KLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAI 537
           KLKL SIL+GQ  +LEEW+LLD+DH++SL GATE+LKASTLRLP+VGK + D+Q+LK A+
Sbjct: 518 KLKLASILRGQMGFLEEWSLLDRDHSSSLSGATESLKASTLRLPIVGKTVVDIQDLKHAV 577

Query: 538 SSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDC 597
           SSA+DVMQAM+SSI  L+SKV+ MNS+  E ++VTAKE  LLE+C+   S ++A+Q+ DC
Sbjct: 578 SSAVDVMQAMSSSIFSLTSKVDEMNSVMVETVNVTAKEKVLLERCQGCLSRVAAMQVTDC 637

Query: 598 SLRTHIIQRNCVTTTSSLTARV 619
           S++THIIQ + +  TSSLT ++
Sbjct: 638 SMKTHIIQLSRIPITSSLTPQL 659

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458810|ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242050 [Vitis vinifera]

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 359/651 (55%), Positives = 448/651 (68%), Gaps = 64/651 (9%)

Query: 6   SDENPTTSSRPPLLPSEKDNARSASGVNGTRKPRGRLVSSRYLSPSPSSSSSSSSTTAAA 65
           S +NPT   RPPL+PSE DN     GV   R+P+GR V+SRYLS       SS+ST+ ++
Sbjct: 120 SHQNPT---RPPLIPSEADN-----GV-ALRRPKGREVTSRYLS-------SSTSTSTSS 163

Query: 66  TAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGP--KRSQSVDRRRPVTGSSPRATTPVP 123
           +  S S S+R +SPL+SR+ +SS + +  PA     KRSQSV+RRRPVT   PR  T   
Sbjct: 164 STSSSSSSRRCASPLVSRTASSSAVMTPMPAPSSLIKRSQSVERRRPVT---PRPNTFDF 220

Query: 124 SSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKA------KATPERRRGTPVR- 176
               + E++TA+KMLITS RSLSVSFQGE+FSL VSKTK       K TPERR+ TP R 
Sbjct: 221 RPGNAGEVTTASKMLITSARSLSVSFQGESFSLRVSKTKPAPASVRKGTPERRKPTPTRA 280

Query: 177 ---------DQP-WPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLNQSLIEN--- 223
                    DQ  WPGRSRQ N SL+RS+DC+ E KK    GSG +A+SL QS+I+    
Sbjct: 281 DQTENSKPVDQHRWPGRSRQVN-SLTRSMDCTDEKKKL--GGSGIMARSLQQSMIDERNR 337

Query: 224 ---ESRLNLDLDNAKQNKDGNLLVSESC--DLVTSD----DTDSVSSGSTNTSGVPESGG 274
              + RLNLD  NA+  K   L+ + S     +TSD    DT+SVSSGST  SG  ESGG
Sbjct: 338 TPLDGRLNLDSGNAELGKANELVNANSVVGSTMTSDPAASDTESVSSGST--SGAQESGG 395

Query: 275 ALASRMKNGA-RGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRT-SNPSKFLQSKRFS 332
                   G  RGI+V ARFWQET++RLRR  +P SP S S G RT + P K +  K+  
Sbjct: 396 GGGGTQGRGVPRGIMVPARFWQETSNRLRRTPEPSSPQSKSNGLRTPAVPPKLIAPKKLL 455

Query: 333 SDSAVSTP----PRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSG 388
           +DS +S+P    P    SP+RG  RP+SP+K   T   SP RG+PSP RVR  VG  L+G
Sbjct: 456 TDSPMSSPRGILPSRGQSPLRGPVRPASPSKLVTTSTYSPLRGMPSPTRVRAVVGS-LNG 514

Query: 389 NSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAE 448
           N SN PSILSF+ D++RGK+GE+R+VDAH+LRLLHNRYLQWRF+NARADA+ +VQ++NAE
Sbjct: 515 NLSNNPSILSFAADVRRGKVGENRMVDAHLLRLLHNRYLQWRFINARADASLLVQRMNAE 574

Query: 449 KNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLG 508
           +++ NA V I +LR+SV  KR  L L+++KLKLT+ILKGQ  YL+EW  +D+DH+NSL G
Sbjct: 575 QSLCNARVAIVDLRDSVRDKRKMLQLMRQKLKLTTILKGQIMYLDEWGPMDRDHSNSLSG 634

Query: 509 ATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAEL 568
           A EALKASTLRLPVV  A AD+QNLKDAI SA+DVMQAMASSIC L SKVE +NSL AEL
Sbjct: 635 AIEALKASTLRLPVVSGARADIQNLKDAICSAVDVMQAMASSICSLLSKVEEVNSLVAEL 694

Query: 569 MSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV 619
            + +AKE A L+QC+D  STL+A+Q+ DCSLRTHI+Q N V   SSLT +V
Sbjct: 695 ANTSAKERACLDQCRDLLSTLAAMQVTDCSLRTHILQLNRV--PSSLTTKV 743

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685396|ref|NP_850614.1| uncharacterized protein [Arabidopsis thaliana] gi|26451622|dbj|BAC42908.1| unknown protein [Arabidopsis thaliana] gi|28973259|gb|AAO63954.1| unknown protein [Arabidopsis thaliana] gi|332642739|gb|AEE76260.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 352/655 (53%), Positives = 441/655 (67%), Gaps = 75/655 (11%)

Query: 3   AAISDENPTTSSRPPLLPSEKDNARSASGVNG--TRKPRG-RLVSSRYLSPSPSSSSSSS 59
           AAIS+   T S  PP  P ++ +    +  NG   R+PR  + V SRYLSPSPS S++++
Sbjct: 9   AAISN---TDSKNPP--PRDRQDKPQLTANNGGLQRRPRAAKNVPSRYLSPSPSHSTTTT 63

Query: 60  STTAAATAKSHSQS------QRFSSPLLSRSTNS-SNLQSTFPALGPKRSQSVDRRRPVT 112
           +TTA +T+ S S S      +R+ SPLLSR+TNS SNL  T P+  PKRSQSVDRRRP  
Sbjct: 64  TTTATSTSTSSSSSVILRSSKRYPSPLLSRTTNSASNLVYT-PSSLPKRSQSVDRRRPSA 122

Query: 113 GSSPRATTPVPSSKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKA--------K 164
            S  R            E+S ATKMLITSTRSLSVSFQGEAFS P+SK K         K
Sbjct: 123 VSDTRT-----------EMSAATKMLITSTRSLSVSFQGEAFSFPISKKKETATPVSHRK 171

Query: 165 ATPERRRGTPVRDQP----------WPGRSRQG-------NPSLSRSLDCSVEGKKFVGF 207
            TPERRR TPVRDQ           WPG SR+G       N         S +G+K    
Sbjct: 172 CTPERRRATPVRDQRENSKPVDQQLWPGASRRGSSESVVPNSLSRSVDSDSDDGRKL--- 228

Query: 208 GSGAVAKSLNQ----SLIENESRLNL------------DLDNAKQNKDGNLLVSESCDLV 251
           GSG V +S+ Q    S +  + RLNL            D + A+Q+    L  S SCD  
Sbjct: 229 GSGFVGRSMLQHSQSSRVSGDGRLNLGFVGGDGMLEMRDENKARQSTHPRLASSVSCDF- 287

Query: 252 TSDDTDSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSP- 310
           T+ DTDSVSSGSTN  G  E G    S+ ++  R  + S +FWQETNSRLRR+QDPGSP 
Sbjct: 288 TASDTDSVSSGSTN--GAHECGSGEVSKTRSLPRNGMASTKFWQETNSRLRRMQDPGSPQ 345

Query: 311 LSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSR 370
            S+     +S  SKF QSKRFSSDS +++ PR M SPIRGA RP+SP+K W T   +P+R
Sbjct: 346 CSSPSSRISSISSKFSQSKRFSSDSPLTSSPRGMTSPIRGATRPASPSKLWATATSAPAR 405

Query: 371 GIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWR 430
              SP+RVRNGV   ++  +   PSIL FS D++RGK+GEDR++DAH+LRLL+NR LQWR
Sbjct: 406 TSSSPSRVRNGVSEQMNAYNRTLPSILCFSADIRRGKIGEDRVMDAHLLRLLYNRDLQWR 465

Query: 431 FVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFP 490
           F NARAD+T MVQ+L+AEK +WNAWV+ISELR+SVTLKRIKLLL+++KLKL SILK Q  
Sbjct: 466 FANARADSTLMVQRLSAEKILWNAWVSISELRHSVTLKRIKLLLMRQKLKLASILKEQMC 525

Query: 491 YLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASS 550
           YLEEW+LLD++H+NSL GATEALKASTLRLPV GKA+ D+Q+LK A+SSA+DVM AM SS
Sbjct: 526 YLEEWSLLDRNHSNSLSGATEALKASTLRLPVSGKAVVDIQDLKHAVSSAVDVMHAMVSS 585

Query: 551 ICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQ 605
           I  L+SKVE MNS+ AE++++T KE  LLEQC+ F + ++A+Q+ DCS++THIIQ
Sbjct: 586 IFSLTSKVEEMNSVMAEMVNITGKEEVLLEQCQGFLTRVAAMQVTDCSMKTHIIQ 640

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	619
TAIR|locus:2091166	644	SCO3 "AT3G19570" [Arabidopsis	0.675	0.649	0.505	4.5e-124
TAIR|locus:2007233	659	QWRF2 "QWRF domain containing	0.789	0.742	0.475	1.9e-108
TAIR|locus:2131949	644	QWRF8 "AT4G30710" [Arabidopsis	0.486	0.467	0.435	4.8e-64
TAIR|locus:2061416	609	QWRF4 "QWRF domain containing	0.462	0.469	0.410	9.9e-58
TAIR|locus:2167756	261	QWRF9 "AT5G43160" [Arabidopsis	0.407	0.965	0.452	8.5e-49
TAIR|locus:2051869	474	EDE1 "ENDOSPERM DEFECTIVE 1" [	0.474	0.620	0.300	2.6e-29
TAIR|locus:2122639	395	QWRF7 "QWRF domain containing	0.444	0.696	0.284	2.1e-24
TAIR|locus:2080522	451	QWRF6 "QWRF domain containing	0.411	0.565	0.284	6.1e-24
TAIR|locus:505006260	482	QWRF3 "AT2G20815" [Arabidopsis	0.512	0.657	0.274	1.2e-15
TAIR|locus:2131974	91	AT4G30740 "AT4G30740" [Arabido	0.092	0.626	0.316	0.00069

TAIR|locus:2091166 SCO3 "AT3G19570" [Arabidopsis thaliana (taxid:3702)]

 Score = 1021 (364.5 bits), Expect = 4.5e-124, Sum P(2) = 4.5e-124
 Identities = 224/443 (50%), Positives = 289/443 (65%)

Query:   182 GRSRQGNP-SLSRSLDC-SVEGKKFVGFGSGAVAKSLNQ----SLIENESRLNL------ 229
             G S    P SLSRS+D  S +G+K    GSG V +S+ Q    S +  + RLNL      
Sbjct:   204 GSSESVVPNSLSRSVDSDSDDGRKL---GSGFVGRSMLQHSQSSRVSGDGRLNLGFVGGD 260

Query:   230 ------DLDNAKQNKDGNLLVSESCDLXXXXXXXXXXXXXXXXXXXPESGGALASRMKNG 283
                   D + A+Q+    L  S SCD                     E G    S+ ++ 
Sbjct:   261 GMLEMRDENKARQSTHPRLASSVSCDFTASDTDSVSSGSTNGAH---ECGSGEVSKTRSL 317

Query:   284 ARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSN-PSKFLQSKRFSSDSAVSTPPR 342
              R  + S +FWQETNSRLRR+QDPGSP  +SP SR S+  SKF QSKRFSSDS +++ PR
Sbjct:   318 PRNGMASTKFWQETNSRLRRMQDPGSPQCSSPSSRISSISSKFSQSKRFSSDSPLTSSPR 377

Query:   343 TMASPIRGANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVD 402
              M SPIRGA RP+SP+K W T   +P+R   SP+RVRNGV   ++  +   PSIL FS D
Sbjct:   378 GMTSPIRGATRPASPSKLWATATSAPARTSSSPSRVRNGVSEQMNAYNRTLPSILCFSAD 437

Query:   403 LKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELR 462
             ++RGK+GEDR++DAH+LRLL+NR LQWRF NARAD+T MVQ+L+AEK +WNAWV+ISELR
Sbjct:   438 IRRGKIGEDRVMDAHLLRLLYNRDLQWRFANARADSTLMVQRLSAEKILWNAWVSISELR 497

Query:   463 NSXXXXXXXXXXXXXXXXXXXXXXGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPV 522
             +S                       Q  YLEEW+LLD++H+NSL GATEALKASTLRLPV
Sbjct:   498 HSVTLKRIKLLLMRQKLKLASILKEQMCYLEEWSLLDRNHSNSLSGATEALKASTLRLPV 557

Query:   523 VGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQC 582
              GKA+ D+Q+LK A+SSA+DVM AM SSI  L+SKVE MNS+ AE++++T KE  LLEQC
Sbjct:   558 SGKAVVDIQDLKHAVSSAVDVMHAMVSSIFSLTSKVEEMNSVMAEMVNITGKEEVLLEQC 617

Query:   583 KDFSSTLSALQIKDCSLRTHIIQ 605
             + F + ++A+Q+ DCS++THIIQ
Sbjct:   618 QGFLTRVAAMQVTDCSMKTHIIQ 640

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005777 "peroxisome" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

TAIR|locus:2007233 QWRF2 "QWRF domain containing 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1040 (371.2 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
 Identities = 245/515 (47%), Positives = 318/515 (61%)

Query:   122 VPSSKQSQELSTAT---KMLITSTRSLSVSFQGEAFSLPVSKTKAKATPERRRGTPVRDQ 178
             +P SK+ +  ST     K      RS  V  Q E  S PV + +       RRG      
Sbjct:   154 LPISKKKETTSTPVSHRKSTPERRRSTPVRDQREN-SKPVDQQRWPGAS--RRGNSESVV 210

Query:   179 PWPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLNQS-LIENESRLNLDL------ 231
             P    SR    SL    D    G  FVG  S      +++S  +    RL+LDL      
Sbjct:   211 P-NSLSR----SLDCGSDRGKLGSGFVG-RSMLHNSMIDESPRVSVNGRLSLDLGGRDEY 264

Query:   232 ----DNAKQNKDGNLLVSESCDLXXXXXXXXXXXXXXXXXXXPESGGALASRMKNGARGI 287
                 D+ ++  +  L  S SCD                            S+ K+  R I
Sbjct:   265 LDIGDDIQRRPNNGLTSSVSCDFTASDTDSVSSGSTNGVQECGSGVNGEISKSKSLPRNI 324

Query:   288 IVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSN-PSKFLQSKRFSSDSAVSTPPRTMAS 346
             + SARFWQETNSRLRRLQDPGSPLS+SPG +TS+  SKF  SKRFSSD+   + PR MAS
Sbjct:   325 MASARFWQETNSRLRRLQDPGSPLSSSPGLKTSSISSKFGLSKRFSSDAVPLSSPRGMAS 384

Query:   347 PIRG-ANRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSG-NSSNTPSILSFSVDLK 404
             P+RG A R +SP+K W T   SP+R + SP+R RNGV   ++  N +NTPSILSFS D++
Sbjct:   385 PVRGSAIRSASPSKLWATTTSSPARALSSPSRARNGVSDQMNAYNRNNTPSILSFSADIR 444

Query:   405 RGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNS 464
             RGK+GEDR++DAH+LRLL+NR LQWRFVNARAD+T MVQ+LNAEKN+WNAWV+ISELR+S
Sbjct:   445 RGKIGEDRVMDAHLLRLLYNRDLQWRFVNARADSTVMVQRLNAEKNLWNAWVSISELRHS 504

Query:   465 XXXXXXXXXXXXXXXXXXXXXXGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVG 524
                                   GQ  +LEEW+LLD+DH++SL GATE+LKASTLRLP+VG
Sbjct:   505 VTLKRIKLLLLRQKLKLASILRGQMGFLEEWSLLDRDHSSSLSGATESLKASTLRLPIVG 564

Query:   525 KAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKD 584
             K + D+Q+LK A+SSA+DVMQAM+SSI  L+SKV+ MNS+  E ++VTAKE  LLE+C+ 
Sbjct:   565 KTVVDIQDLKHAVSSAVDVMQAMSSSIFSLTSKVDEMNSVMVETVNVTAKEKVLLERCQG 624

Query:   585 FSSTLSALQIKDCSLRTHIIQRNCVTTTSSLTARV 619
               S ++A+Q+ DCS++THIIQ + +  TSSLT ++
Sbjct:   625 CLSRVAAMQVTDCSMKTHIIQLSRIPITSSLTPQL 659

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2131949 QWRF8 "AT4G30710" [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 138/317 (43%), Positives = 187/317 (58%)

Query:   299 SRLRRLQDPGS-PLSTSPGS--RTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGAN--R 353
             +RL  L  PGS P S S  S   +S+ S+ + + R  S S   +P R + SP RG +  R
Sbjct:   310 ARLHPLPAPGSRPASPSRTSFLSSSSISRGMSTSRGVSPSRGLSPSRGL-SPTRGLSPSR 368

Query:   354 PSSPNKSWNTPCMS-----PSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKM 408
               SP++  NT C +     PSRGI SP+R+R       S  SS T S+LSF  D+K+GK 
Sbjct:   369 GLSPSRGTNTSCFARPSTPPSRGI-SPSRIRQTT---TSTQSSTTTSVLSFITDVKKGKK 424

Query:   409 GEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSXXXX 468
                 I D H LRLLHNRYLQWRF  ARA++   +Q+L +E+ ++N W  ISEL++     
Sbjct:   425 AS-YIEDVHQLRLLHNRYLQWRFAIARAESVMYIQRLTSEETLFNVWHAISELQDHVTRQ 483

Query:   469 XXXXXXXXXXXXXXXXXXGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIA 528
                                Q   LE+WA L++DH +SL+GA   L+A+TLRLP  G   A
Sbjct:   484 RIGLQQLKLEIKLNSLLNDQMVSLEDWATLERDHVSSLVGAISDLEANTLRLPATGGTKA 543

Query:   529 DVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSST 588
             D ++LK A+SSALDVMQAM SSI  L SKVE MN +  EL  V  KE ++  +C+D  ++
Sbjct:   544 DTESLKAAMSSALDVMQAMGSSIWSLLSKVEEMNIMVTELAVVVTKESSMQGKCEDLLAS 603

Query:   589 LSALQIKDCSLRTHIIQ 605
              + +QI++CSLRTH+IQ
Sbjct:   604 TAIMQIEECSLRTHLIQ 620

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2061416 QWRF4 "QWRF domain containing 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
 Identities = 122/297 (41%), Positives = 182/297 (61%)

Query:   310 PLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPS 369
             P+S +PGSRT++PS+   S   SS+S   +P R + SP+RG + P   N+S       PS
Sbjct:   300 PMS-APGSRTASPSRSSFSSSSSSNSRGMSPSRGV-SPMRGLS-PVG-NRSLVRSSTPPS 355

Query:   370 RGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQW 429
             RG+ SP+R+R         +S+NT S+LSF  D+K+GK     I D H LRLL+NRY QW
Sbjct:   356 RGV-SPSRIRQTA----QSSSTNT-SVLSFIADVKKGKKAT-YIEDVHQLRLLYNRYSQW 408

Query:   430 RFVNARADATFMVQQLNAEKNIWNAWVTISELRNSXXXXXXXXXXXXXXXXXXXXXXGQF 489
             RF NARA+    VQ L A++ ++N W  IS+LR+                        Q 
Sbjct:   409 RFANARAEGVSYVQSLIAKETLYNVWHAISDLRDLVTTQRICLQQLKLEIKLRSILNDQM 468

Query:   490 PYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMAS 549
               LE+WA+++++H +SL GA   L+A+TLRLP+ G   AD+ +LK A+SSALDVMQ+M S
Sbjct:   469 VCLEDWAMVEREHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALDVMQSMGS 528

Query:   550 SICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQR 606
             SI  L S++E MN L ++L  +   E  LL++C++  ++ + ++I++ SL+TH+IQ+
Sbjct:   529 SIWSLHSQMEEMNKLVSDLAVIAKTENFLLDKCENLLASTAVMEIEERSLKTHLIQK 585

GO:0005634 "nucleus" evidence=ISM

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2167756 QWRF9 "AT5G43160" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 120/265 (45%), Positives = 167/265 (63%)

Query:   344 MASPIRGAN--RPSSPNKSWNTPC-MSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFS 400
             ++SP RG +  R  SP++    P  +SPS  + SP RVR+ +       S NTP I  F+
Sbjct:     5 LSSP-RGTSIARGLSPSREVVPPRGVSPSDRM-SPLRVRSSL-------SKNTPLIPHFA 55

Query:   401 VDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISE 460
             VD K  K+ ++ + DAH+LRLLH+R LQW+F NARA+A    Q++  E+ ++NAW +IS 
Sbjct:    56 VDGKE-KIRDNGVADAHLLRLLHSRLLQWQFANARANAVISSQKMREERRLYNAWRSISN 114

Query:   461 LRNSXXXXXXXXXXXXXXXXXXXXXXGQFPYLEEWALLDKDHTNSLLGATEALKASTLRL 520
             L NS                       Q  +LEEW ++D+++  SL+GA EALK STL L
Sbjct:   115 LYNSVSMKRIEMQHLKQNLKLISILNMQMGHLEEWLVIDRNYMGSLVGAAEALKGSTLCL 174

Query:   521 PVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLE 580
             PV   A+ +VQ++KDAI SA+DVMQAMASSICLL  KV  ++SL AEL  V AK+  +L+
Sbjct:   175 PVDCGAMVNVQSVKDAICSAVDVMQAMASSICLLLPKVGKISSLAAELGRVNAKDEGMLD 234

Query:   581 QCKDFSSTLSALQIKDCSLRTHIIQ 605
              C+D  +T+SALQ+ +CSLRT + Q
Sbjct:   235 VCRDLLNTISALQVTECSLRTQVTQ 259

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2051869 EDE1 "ENDOSPERM DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
 Identities = 92/306 (30%), Positives = 150/306 (49%)

Query:   302 RRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPS-SP-NK 359
             R L+  G  LS+S      N ++ +    F S+     P  T+ +  +  N P+ SP ++
Sbjct:   165 RLLRSSGISLSSSTDGEEDNNNREI----FKSNGPDLLP--TIRTQAKAFNTPTASPLSR 218

Query:   360 SWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHML 419
             S ++   S  R + +   ++NGVG  L   + N+        D K+ K    +  D H L
Sbjct:   219 SLSSDDASMFRDVRASLSLKNGVGLSLPPVAPNS----KIQADTKKQKKALGQQADVHSL 274

Query:   420 RLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSXXXXXXXXXXXXXXX 479
             +LLHNRYLQWRF NA A+     Q+  AE+  ++  + +SEL +S               
Sbjct:   275 KLLHNRYLQWRFANANAEVKTQSQKAQAERMFYSLGLKMSELSDSVQRKRIELQHLQRVK 334

Query:   480 XXXXXXXGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISS 539
                     Q P LE+WA+L+ + + SLL  TEAL  ++LRLP+  K   + + L +A+  
Sbjct:   335 AVTEIVESQTPSLEQWAVLEDEFSTSLLETTEALLNASLRLPLDSKIKVETKELAEALVV 394

Query:   540 ALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSL 599
             A   M+ +  +I  L  K + M +L +EL  V+  E A +E C+       + Q+++C L
Sbjct:   395 ASKSMEGIVQNIGNLVPKTQEMETLMSELARVSGIEKASVEDCRVALLKTHSSQMEECYL 454

Query:   600 RTHIIQ 605
             R+ +IQ
Sbjct:   455 RSQLIQ 460

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA;IMP

GO:0005880 "nuclear microtubule" evidence=IDA

GO:0008017 "microtubule binding" evidence=IPI

GO:0009960 "endosperm development" evidence=IMP

GO:0010342 "endosperm cellularization" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0051301 "cell division" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2122639 QWRF7 "QWRF domain containing 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
 Identities = 84/295 (28%), Positives = 138/295 (46%)

Query:   316 GSRTSNPSKFLQSKRFSSDSAVSTPP---RTMASPIRGANRPSSPNKSWNTPCMSPSRGI 372
             GS  SN S        SS SA +  P    TM +P+      S+P  S    CM+P    
Sbjct:   112 GSPRSNASSRGVKPGASSPSAWALSPGRLSTMKTPLSS----SAPTTSM---CMTPPESP 164

Query:   373 PSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFV 432
              S A++R+G GG ++G       +L + +  K+    ++   D H  R+  NR LQWRFV
Sbjct:   165 VSKAKIRSGGGGAVAG-------VLKYFMAQKKVSPVQEE--DYHRFRIFQNRLLQWRFV 215

Query:   433 NARADATFMVQQLNAEKNIWNAWVTISELRNSXXXXXXXXXXXXXXXXXXXXXXGQFPYL 492
             NAR +AT    ++N E  ++  W+ I ++RN                        Q P L
Sbjct:   216 NARTEATMANLKINVEDQLFWVWLRIYKMRNYVVENLIEIQRLRQDIKVREVLSLQMPLL 275

Query:   493 EEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSIC 552
              EW+ +D  ++ +L   T  L A ++RLP+V  A  D+ ++ + +  A++VM  +   I 
Sbjct:   276 NEWSKIDAKNSEALSKLTRKLHALSVRLPLVHGATIDMVSIHEEMVIAIEVMDEIEDVII 335

Query:   553 -LLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQR 606
               L  +VE +     EL+ +  +E+   E+  +   ++     K+ SLR HI+Q+
Sbjct:   336 KFLPRQVEIILYELTELIGMFNQELLYFEEMDESLLSIPLFTAKESSLRVHILQK 390

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080522 QWRF6 "QWRF domain containing 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 6.1e-24, Sum P(2) = 6.1e-24
 Identities = 74/260 (28%), Positives = 119/260 (45%)

Query:   359 KSWNTPCMSP-SRGIPSPA---RVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIV 414
             K +N P  S  +R + SP+    VR        G     P       D K+ +   +++ 
Sbjct:   192 KVFNNPVPSSLNRSVSSPSSSCNVRESSSFSRLGLPL-PPMAPKVPADTKKQRKVTEQLE 250

Query:   415 DAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSXXXXXXXXXX 474
             D H L+LLHNRYLQWRF NA A       +   E  I +    ISEL +S          
Sbjct:   251 DVHSLKLLHNRYLQWRFANANAQVKTQTHKTQTETMIHSFGSKISELHDSVQRKRIELQR 310

Query:   475 XXXXXXXXXXXXGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLK 534
                          Q P LE+W+ ++++++ S+    +A   ++LRLP+ G  + D + L 
Sbjct:   311 LLKTKALLAITESQTPCLEQWSAIEEEYSTSVSQTIQAFSNASLRLPLDGDIMVDSKQLG 370

Query:   535 DAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQI 594
             D + +A  ++  +  ++     K + M SL +EL  V   E +L E C        A QI
Sbjct:   371 DGLVAASKIVDGITQNVGNYMPKAKEMESLLSELTRVARSERSLTENCVVALLKTQASQI 430

Query:   595 KDCSLRTHIIQRNCVTTTSS 614
             ++CS+R+ +IQ+     +SS
Sbjct:   431 EECSMRSQLIQQTTKEESSS 450

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006260 QWRF3 "AT2G20815" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 94/343 (27%), Positives = 164/343 (47%)

Query:   282 NGARGIIVSARFWQETNSRLRRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVSTPP 341
             N   GI VS+++  +  ++  +  +  + L +   S+ +N SK +++ R   +++VS   
Sbjct:   155 NHKPGIKVSSKYLHDLTAKPSKGNNK-TKLRSQDDSQRTNSSKGIEN-RLQRNNSVS--- 209

Query:   342 RTMASPIRGANRPSSPNKSWNTPCMS-PSRGIPSPARVRNGVGGILS-G----NSSNTPS 395
             R  +S  + A    SP +S +T  ++ PS  +  P R + GVG +++ G     S N  S
Sbjct:   210 RYGSSMSQWA---LSPGRSLDTQAVTVPSSKL-KPPRGK-GVGKLINLGFDFFRSKNKSS 264

Query:   396 ILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNARA-DATFMVQQLNAEKN-IWN 453
                F+  LK      +    AH L+L++NR LQWRFVNARA D    V   + EKN +  
Sbjct:   265 --PFTSPLKPKTCDTE---SAHQLKLMNNRLLQWRFVNARACDVNKNVA--SQEKNQLLC 317

Query:   454 AWVTISELRNSXXXXXXXXXXXXXXXXXXXXXXGQFPYLEEWALLDKDHTNSLLGATEAL 513
             AW T+ +L N                        Q  +LE W  ++  H +SL    ++L
Sbjct:   318 AWDTLIKLNNLVLQERIKLQKKNLEMKLNYVFLSQVKHLEAWEDMEIQHLSSLSIIRDSL 377

Query:   514 KASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTA 573
              +   RLP+   A  ++++    I +A  V  A+ S++   +  +E +  L ++L  V  
Sbjct:   378 HSVLSRLPLKEGAKVNLESAVSIIKNAEAVTDAIISTVDDYAPTMEGIVPLASQLAEVVV 437

Query:   574 KEMALLEQCKDFSSTLSALQIKDCSLRT-HIIQRNCVTTTSSL 615
             +E  +LE+C D    +S L++++ SL+   +IQ      T+ L
Sbjct:   438 QEKLMLEKCHDLLRMISELEMQERSLKCCFLIQHKQTFDTNLL 480

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2131974 AT4G30740 "AT4G30740" [Arabidopsis thaliana (taxid:3702)]

 Score = 65 (27.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query:   311 LSTSPGSRTSNPSKFLQSKRFSSDSAVST-P-PRTMASPIRGANRPSSPNKSWNTPCMSP 368
             +S+S G RT  PS  +  K  +  ++VS  P P    SP++G N  S  +++ + P   P
Sbjct:    24 VSSSSGDRTLRPSSNIAQKHKAETTSVSRKPTPERKRSPLKGKNNVSDLSEN-SKPVDGP 82

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.4078.1 hypothetical protein (602 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	619
pfam04484	313	pfam04484, DUF566, Family of unknown function (DUF	3e-87
PHA03307	1352	PHA03307, PHA03307, transcriptional regulator ICP4	0.001

>gnl|CDD|218107 pfam04484, DUF566, Family of unknown function (DUF566)

 Score =  274 bits (701), Expect = 3e-87
 Identities = 168/325 (51%), Positives = 213/325 (65%), Gaps = 15/325 (4%)

Query: 257 DSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQET-NSRLRRLQDPGSPLSTSP 315
            SVSSGST  SG   S  + + R         +S+ F   + +SR RRL  P SP S+SP
Sbjct: 3   ASVSSGST--SGDASSPRSSSRR--------RLSSSFLSTSASSRPRRLNAPASPPSSSP 52

Query: 316 GSRTSNPSKFLQSKRFSSDSAVSTPPRTMASPIRGANRPSSPNKSWNTPCMSPSRGIPSP 375
              TS+ S F  SK+  S  +         SP RG   PS+      +   + + G  SP
Sbjct: 53  ARNTSSSSSFGLSKQRPSSLSRGRLSSRFVSPSRG--SPSAAASLNGSLATASTSGSSSP 110

Query: 376 ARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDRIVDAHMLRLLHNRYLQWRFVNAR 435
           +R R      LS  S N PS+LSF  D+KRGK G  +I DAH LRLL+NR LQWRFVNAR
Sbjct: 111 SRSRRTTSSDLS--SGNGPSVLSFMADVKRGKKGPSKIEDAHQLRLLYNRLLQWRFVNAR 168

Query: 436 ADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEW 495
           A+A   VQ+LNAEK ++NAW+ ISELRNSV +KRIKL  ++++LKL S+LK Q  YLEEW
Sbjct: 169 AEAAMAVQKLNAEKQLFNAWLRISELRNSVAMKRIKLQRLRQELKLNSVLKSQMSYLEEW 228

Query: 496 ALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLS 555
           + L++DH++SL GA EALKASTLRLPVVG A AD+Q+LK+A+SSA+DVMQAM SSIC L 
Sbjct: 229 SDLERDHSSSLSGAIEALKASTLRLPVVGGAKADMQSLKEAVSSAVDVMQAMGSSICSLL 288

Query: 556 SKVENMNSLTAELMSVTAKEMALLE 580
           SKVE ++SL +EL  V A+E  LL+
Sbjct: 289 SKVEGISSLVSELAEVAAQEKVLLD 313

Family of related proteins that is plant specific. Length = 313

>gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional

 Score = 42.1 bits (99), Expect = 0.001
 Identities = 51/192 (26%), Positives = 65/192 (33%), Gaps = 18/192 (9%)

Query: 7   DENPTTSSRPPLLPSEKDNARSASGVNGTRKPRGRLVSS---RYLSPSPSSSSSSSSTTA 63
           +E P     P  LP+    A S      +R       SS   R  SPSPSS  S  + ++
Sbjct: 253 NECPLPRPAPITLPTRIWEA-SGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSS 311

Query: 64  AATAKSHSQSQRFSSPLLSRSTNSSNLQSTFPALGPKRSQSVDRRRPVTGSSPRATTPVP 123
              + S S S+  SS   S S+ SS   +  P   P RS S  R  P    S     P P
Sbjct: 312 PRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRP 371

Query: 124 S--------SKQSQELSTATKMLITSTRSLSVSFQGEAFSLPVSKTKAKATPER-----R 170
           S        S        A   +    R    + +  A     S   A A          
Sbjct: 372 SRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYP 431

Query: 171 RGTPVRDQPWPG 182
             TP  + PWPG
Sbjct: 432 LLTPSGE-PWPG 442

Length = 1352

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	619
PF04484	311	DUF566: Family of unknown function (DUF566) ; Inte	100.0
PF15003	277	HAUS2: HAUS augmin-like complex subunit 2	91.29
cd07600	242	BAR_Gvp36 The Bin/Amphiphysin/Rvs (BAR) domain of	90.44
COG0497	557	RecN ATPase involved in DNA repair [DNA replicatio	90.01
TIGR01005	754	eps_transp_fam exopolysaccharide transport protein	86.85
KOG0978	698	consensus E3 ubiquitin ligase involved in syntaxin	86.3
KOG0933	1174	consensus Structural maintenance of chromosome pro	85.4
PF10455	289	BAR_2: Bin/amphiphysin/Rvs domain for vesicular tr	84.88
TIGR03017	444	EpsF chain length determinant protein EpsF. Sequen	84.28
PRK09841	726	cryptic autophosphorylating protein tyrosine kinas	80.95

>PF04484 DUF566: Family of unknown function (DUF566) ; InterPro: IPR007573 This is a family of related proteins that is plant specific

Probab=100.00  E-value=5.7e-86  Score=680.92  Aligned_cols=307  Identities=55%  Similarity=0.770  Sum_probs=258.7

Q ss_pred             CccccCCCCCCCCCCCCCcccccccCCCcceeeeccccccc-cccccccCCCCCCCCCCCCCCCCCCCc-ccccccccCC
Q 007071          257 DSVSSGSTNTSGVPESGGALASRMKNGARGIIVSARFWQET-NSRLRRLQDPGSPLSTSPGSRTSNPSK-FLQSKRFSSD  334 (619)
Q Consensus       257 ~svsSgs~~~sg~~~~~~~~~s~~~~~~rg~~v~ARf~q~~-~sR~rRl~~p~s~~~~~~~~~~~~~~k-~~~~kk~~~~  334 (619)
                      |+|+||++  +|..+.+.+.+      ++....+ ||||++ ++|.+++++|++++.+.+......+.. .....+... 
T Consensus         1 ~svsS~st--s~~~~~~~~~s------~r~~~~~-r~~~~~~~sr~~~~~~~~s~~~s~~~~~~~s~s~~~~~~~~~~s-   70 (311)
T PF04484_consen    1 DSVSSGST--SGSQSPPRRVS------RRRLSSS-RFWQESTRSRSRRLSDPSSPRSSSPSSPTSSSSSNSSSRSNSKS-   70 (311)
T ss_pred             CCcCCCCC--CCCCCCCCCCC------CCCCCCc-cccccccCCcccccCCCCCCCCCCCCccccCCCccccccccccc-
Confidence            57899988  77776554322      2222223 999997 999999999999988877666544444 121211111 


Q ss_pred             CCCcCCCCcccCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCccCCCCCCCCccccchhhccccCCCccc
Q 007071          335 SAVSTPPRTMASPIRGA--NRPSSPNKSWNTPCMSPSRGIPSPARVRNGVGGILSGNSSNTPSILSFSVDLKRGKMGEDR  412 (619)
Q Consensus       335 ~~~sss~r~~~SP~r~~--~rp~SPsk~~~~s~~spsR~~~SPsR~r~~v~~~~s~~~~~~~sils~~~D~rkgKk~~~~  412 (619)
                      ......++|+.||+|..  ..+.+|+++..+    ..+..++|+|.|+.+...   +.++.++|++|+.|++||||+++|
T Consensus        71 ~~~~~~ss~~~Sp~r~~~~~~~~~~~~~~~~----s~~~~~sPsr~r~~~~~~---~~~~~~si~s~~~d~~rgkk~~~~  143 (311)
T PF04484_consen   71 LPGGSLSSWALSPSRSSSSSSPSSPSSLSTS----SSSPSSSPSRSRRSTSSG---QSNSGPSILSFAADVRRGKKGASQ  143 (311)
T ss_pred             ccCCcCCcCCCCCCCCCCCCCCCCCCccccC----CCCCCCCCCCCCCCCCcc---cCCCCcccccccccccccccCcch
Confidence            12223467778999863  233444444332    223333899999765432   668899999999999999999999


Q ss_pred             hhhhhhhhhhhcchhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccCh
Q 007071          413 IVDAHMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYL  492 (619)
Q Consensus       413 ~Ed~HqLRLLhNRlLQWRFaNARAeaa~~~q~~~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~L  492 (619)
                      +||+|||||||||||||||||||||+++++|+.+||++||++|++|++||++|++||||||++||++||++||++||+||
T Consensus       144 ~Ed~H~LRLLhNR~LQWRFaNArAeaa~~~q~~~aE~~L~~~w~~is~Lr~sV~~KRi~lq~~kq~~KL~~IL~~Q~~~L  223 (311)
T PF04484_consen  144 IEDAHQLRLLHNRLLQWRFANARAEAALSAQKANAEKKLYNAWLRISELRDSVAMKRIELQRLKQELKLNSILKSQMPYL  223 (311)
T ss_pred             hHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHhhhhhhhhhHHHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHH
Q 007071          493 EEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVT  572 (619)
Q Consensus       493 EeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va  572 (619)
                      |+|+.||++|+++|++++|||+|++|||||++|||+|+++|++||++||||||+|+++||+|+||||+|++||+||++|+
T Consensus       224 e~W~~le~~h~~sl~~~~~aL~a~~lrlP~~~ga~~d~~~l~~al~sAvdvm~~i~ssi~~l~pk~e~~~~l~seLa~v~  303 (311)
T PF04484_consen  224 EEWAALEREHSSSLSGATEALKASTLRLPVTGGAKADVQSLKEALSSAVDVMQAIESSICSLLPKVEETSSLVSELARVA  303 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCceecHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 007071          573 AKEMALLE  580 (619)
Q Consensus       573 ~qE~~lLe  580 (619)
                      +||++|||
T Consensus       304 ~~E~~ll~  311 (311)
T PF04484_consen  304 AQERALLE  311 (311)
T ss_pred             HHHHHhcC
Confidence            99999986

>PF15003 HAUS2: HAUS augmin-like complex subunit 2

Probab=91.29  E-value=6.5  Score=41.80  Aligned_cols=142  Identities=13%  Similarity=0.249  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccChhhHHhhhhh---hhhhHHHHHHHHHhc----c-
Q 007071          446 NAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKD---HTNSLLGATEALKAS----T-  517 (619)
Q Consensus       446 ~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~LEeW~~LE~e---hsssLs~a~eaL~Aa----t-  517 (619)
                      ..+.+||..-..|..|+..+.++.+|+|+++.+..-.+|++.  .||++=...=..   |..++..=.+.|-+-    . 
T Consensus        44 ~~s~~l~s~L~QIt~iQaeI~q~nlEielLkleKeTADltH~--~~L~~K~~~Lq~m~shLe~VLk~K~~Lr~RLqkP~~  121 (277)
T PF15003_consen   44 EKSSDLFSRLRQITNIQAEIDQLNLEIELLKLEKETADLTHP--DYLAEKCEALQSMNSHLEAVLKEKDRLRQRLQKPYC  121 (277)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcchHhhhCH--HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhh
Confidence            345678999999999999999999999999999999888753  455433222222   333333322222221    1 


Q ss_pred             -cccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 007071          518 -LRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLSALQ  593 (619)
Q Consensus       518 -lRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va~qE~~lLeEC~eLL~~~a~Lq  593 (619)
                       -.|||..-..-   .+.+-|..|+.-|+.+...+..+-- .-.+..-+..+..+.++=-.+|-||++|...+..+.
T Consensus       122 qe~LPVEA~yHr---~vVeLL~laa~fi~~Le~~LetIrw-ip~~~~~~~~m~~aL~ki~~lvae~E~l~e~ilkwR  194 (277)
T PF15003_consen  122 QENLPVEAQYHR---YVVELLELAASFIEKLEEHLETIRW-IPNFDENPSNMDKALAKIDALVAECEELAEQILKWR  194 (277)
T ss_pred             hcCccchhhhhH---HHHHHHHHHHHHHHHHHHHHHHHhc-cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             23555322222   3444444455555555544442210 111233345666666666778899999999888775

>cd07600 BAR_Gvp36 The Bin/Amphiphysin/Rvs (BAR) domain of Saccharomyces cerevisiae Golgi vesicle protein of 36 kDa and similar proteins

Probab=90.44  E-value=12  Score=38.85  Aligned_cols=119  Identities=15%  Similarity=0.179  Sum_probs=71.7

Q ss_pred             HHHHHhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccChhhHHhhhhhhhhhH
Q 007071          430 RFVNARADATFMVQQLN---AEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSL  506 (619)
Q Consensus       430 RFaNARAeaa~~~q~~~---AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~LEeW~~LE~ehsssL  506 (619)
                      +.++||-+--..++..=   -+..|..-|..|.+.|+.|..+|+.+...|.++|-..--..+-.+=++-...|.++..  
T Consensus       118 kIa~ar~~~D~~I~~~Fl~pL~~~L~~d~k~i~k~RKkle~~RLd~D~~K~~~~ka~~~~k~~~~~~e~E~aEdef~~--  195 (242)
T cd07600         118 KIAEARLEQDQLIQKEFNAKLRETLNTSFQKAHKARKKVEDKRLQLDTARAELKSAEPAEKQEAARVEVETAEDEFVS--  195 (242)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHH--
Confidence            55555555444444322   2345666888999999999999999999998774321000010011111122222221  


Q ss_pred             HHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007071          507 LGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFS  586 (619)
Q Consensus       507 s~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va~qE~~lLeEC~eLL  586 (619)
                                                   +-..|+.+|+.|...           ...+.+|...+.-+....++|.++|
T Consensus       196 -----------------------------a~E~a~~~M~~il~~-----------~e~i~~L~~fv~AQl~Yh~~~~e~L  235 (242)
T cd07600         196 -----------------------------ATEEAVELMKEVLDN-----------PEPLQLLKELVKAQLAYHKTAAELL  235 (242)
T ss_pred             -----------------------------hHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                         223455566655333           2368888899999999999999999


Q ss_pred             HHHH
Q 007071          587 STLS  590 (619)
Q Consensus       587 ~~~a  590 (619)
                      ..+.
T Consensus       236 ~~l~  239 (242)
T cd07600         236 EELL  239 (242)
T ss_pred             HHHh
Confidence            8764

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions including organelle biogenesis, membrane trafficking or remodeling, and cell division and migration. Proteomic analysis shows that Golgi vesicle protein of 36 kDa (Gvp36) may be involved in vesicular trafficking and nutritional adaptation. A Saccharomyces cerevisiae strain deficient in Gvp36 shows defects in growth, in actin cytoskeleton polarization, in endocytosis, in vacuolar biogenesis, and in the cell cycle. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]

Probab=90.01  E-value=6.5  Score=45.41  Aligned_cols=79  Identities=20%  Similarity=0.184  Sum_probs=40.6

Q ss_pred             hhhhhhhcchhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccCh----
Q 007071          417 HMLRLLHNRYLQWRFVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYL----  492 (619)
Q Consensus       417 HqLRLLhNRlLQWRFaNARAeaa~~~q~~~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~L----  492 (619)
                      |.=..|-+--.|-.+..+.+......+  .+-...|..|..+.+-..-...+.-++++      ....|.-|+.-|    
T Consensus       130 h~~q~Ll~~~~~r~lLD~f~~~~~~~~--~~~~~~y~~w~~~~~~l~~~~~~~~e~~~------~~d~L~fq~~Ele~~~  201 (557)
T COG0497         130 HEHQSLLKPELQRQLLDAFAGLEELAQ--EAYQEAYQAWKQARRELEDLQEKERERAQ------RADLLQFQLEELEELN  201 (557)
T ss_pred             chHHHhcChHHHHHHHHHhcCchHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHhcC
Confidence            333344444445555555555544444  34467899998876544433333322221      223344444333    


Q ss_pred             ---hhHHhhhhhhh
Q 007071          493 ---EEWALLDKDHT  503 (619)
Q Consensus       493 ---EeW~~LE~ehs  503 (619)
                         .||..|+.+|.
T Consensus       202 l~~gE~e~L~~e~~  215 (557)
T COG0497         202 LQPGEDEELEEERK  215 (557)
T ss_pred             CCCchHHHHHHHHH
Confidence               47888887754

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family

Probab=86.85  E-value=43  Score=39.38  Aligned_cols=75  Identities=11%  Similarity=-0.005  Sum_probs=52.3

Q ss_pred             HHHHHHhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccCh-hhHHhhhhhhh
Q 007071          429 WRFVNARADATF----MVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYL-EEWALLDKDHT  503 (619)
Q Consensus       429 WRFaNARAeaa~----~~q~~~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~L-EeW~~LE~ehs  503 (619)
                      =+++|+=+++=+    ..+...+.+.+-++..++.+||+.+.+...+|+..|++.++... .. ..+. ++...|+.+..
T Consensus       170 a~iaN~la~~Y~~~~~~~k~~~~~~a~~~L~~ql~~l~~~l~~aE~~l~~fk~~~~l~~~-~~-~~~~~~~L~~l~~ql~  247 (754)
T TIGR01005       170 AAIPDAIAAAYIAGQGAAKSESNTAAADFLAPEIADLSKQSRDAEAEVAAYRAQSDLLMG-NN-ATLATQQLAELNTELS  247 (754)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-CC-ccchHHHHHHHHHHHH
Confidence            345666555544    34455566778888999999999999999999999999888653 22 2222 56666666655


Q ss_pred             hh
Q 007071          504 NS  505 (619)
Q Consensus       504 ss  505 (619)
                      .+
T Consensus       248 ~a  249 (754)
T TIGR01005       248 RA  249 (754)
T ss_pred             HH
Confidence            43

The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export.

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]

Probab=86.30  E-value=20  Score=42.62  Aligned_cols=156  Identities=14%  Similarity=0.146  Sum_probs=101.0

Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHHH--------HhHHHhHHhhccc--ChhhHHh---hhhhhhhhHHHH
Q 007071          445 LNAEKNIWN-AWVTISELRNSVTLKRIKLL-LVKK--------KLKLTSILKGQFP--YLEEWAL---LDKDHTNSLLGA  509 (619)
Q Consensus       445 ~~AE~~Ly~-~W~~is~LR~sVa~KRieLq-~lkq--------~~KL~~IL~~Qm~--~LEeW~~---LE~ehsssLs~a  509 (619)
                      ..++..|+. +|..+..|...--..+.+|| ++++        ..++...-..-+.  -+++|..   ....++..|...
T Consensus       366 ~~~k~el~~~~~~~le~~k~~~ke~~~~~~~ka~~E~e~l~q~l~~~~k~e~~e~~k~~~d~~~r~~~~~~~~~e~Lqk~  445 (698)
T KOG0978|consen  366 LVAKSELLKTNELRLEMLKSLLKEQRDKLQVKARAETESLLQRLKALDKEERSEIRKQALDDAERQIRQVEELSEELQKK  445 (698)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHHHHHHHH
Confidence            344555555 99988887766655555555 3333        3334444444444  7788877   777889999999


Q ss_pred             HHHHHhcccccccCCCcccchHH--------HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 007071          510 TEALKASTLRLPVVGKAIADVQN--------LKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQ  581 (619)
Q Consensus       510 ~eaL~AatlRLPv~~GAkaD~~s--------lk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va~qE~~lLeE  581 (619)
                      .+...+..-.++++|+|.-|+|+        +.++-.-...+|-+-..+-..+---.++...+-.++..+..+...+...
T Consensus       446 ~~~~k~ll~e~~t~gsA~ed~Qeqn~kL~~el~ekdd~nfklm~e~~~~~q~~k~L~~ek~~l~~~i~~l~~~~~~~~~~  525 (698)
T KOG0978|consen  446 EKNFKCLLSEMETIGSAFEDMQEQNQKLLQELREKDDKNFKLMSERIKANQKHKLLREEKSKLEEQILTLKASVDKLELK  525 (698)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999988764        4556666777887666544443333455555556666666666666665


Q ss_pred             HHHHHHHHHhhHHHhhhhh
Q 007071          582 CKDFSSTLSALQIKDCSLR  600 (619)
Q Consensus       582 C~eLL~~~a~LqVeE~SLR  600 (619)
                      -+.|=-....|+-.+..|-
T Consensus       526 i~~leeq~~~lt~~~~~l~  544 (698)
T KOG0978|consen  526 IGKLEEQERGLTSNESKLI  544 (698)
T ss_pred             HHHHHHHHHHhhHhhhhhH
Confidence            5555555555554444443

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]

Probab=85.40  E-value=41  Score=41.61  Aligned_cols=178  Identities=16%  Similarity=0.219  Sum_probs=110.1

Q ss_pred             hhhhhcchhhHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccChhh
Q 007071          419 LRLLHNRYLQWRFVNARADA----TFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEE  494 (619)
Q Consensus       419 LRLLhNRlLQWRFaNARAea----a~~~q~~~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~LEe  494 (619)
                      ||==--+||+|+-+|+--|-    ..+++..++|...-..-+.|.++.+.++..--++++..++++   .|+.++.-+++
T Consensus       210 LR~Ers~~lE~q~~~~dle~l~R~~ia~eY~~~~~~~~~~~~~i~e~~~~i~~l~e~~~k~~~ei~---~le~~ikei~~  286 (1174)
T KOG0933|consen  210 LREERSQYLEYQKINRDLERLSRICIAYEYLQAEEKRKNSAHEIEEMKDKIAKLDESLGKTDKEIE---SLEKEIKEIEQ  286 (1174)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHH
Confidence            33344679999988876654    456777888888888888888888888776666655555543   45666665544


Q ss_pred             HHhhhhhhh---hhHHHHHHHHHhcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-------hhHH
Q 007071          495 WALLDKDHT---NSLLGATEALKASTLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVEN-------MNSL  564 (619)
Q Consensus       495 W~~LE~ehs---ssLs~a~eaL~AatlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee-------~~~l  564 (619)
                      =  -|.+|.   .+|+.....+.+...|.      ..++...++.|..--.-.+.|...|..+--++.+       +...
T Consensus       287 ~--rd~em~~~~~~L~~~~~~~~~~~tr~------~t~l~~~~~tl~~e~~k~e~i~~~i~e~~~~l~~k~~~~~~~~~~  358 (1174)
T KOG0933|consen  287 Q--RDAEMGGEVKALEDKLDSLQNEITRE------ETSLNLKKETLNGEEEKLEEIRKNIEEDRKKLKEKEKAMAKVEEG  358 (1174)
T ss_pred             H--HHHHhchhhhhHHHHHHHHHHHHHHH------HHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHHHHHHHhhhhhh
Confidence            2  222332   34444444555544443      2344455555555555566666666555444333       3333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhHH----Hhhhhhhhhhhhc
Q 007071          565 TAELMSVTAKEMALLEQCKDFSSTLSALQI----KDCSLRTHIIQRN  607 (619)
Q Consensus       565 vSELa~Va~qE~~lLeEC~eLL~~~a~LqV----eE~SLR~~liQ~~  607 (619)
                      ...|.+--..-..+|++|++++..+.+.-.    +|.+|-.||+-.+
T Consensus       359 ~~~~ke~~~~~s~~~e~~e~~~eslt~G~Ss~~~~e~~l~~ql~~aK  405 (1174)
T KOG0933|consen  359 YEKLKEAFQEDSKLLEKAEELVESLTAGLSSNEDEEKTLEDQLRDAK  405 (1174)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccchhhHHHHHHHHH
Confidence            444666666777899999999999887642    5666666665443

>PF10455 BAR_2: Bin/amphiphysin/Rvs domain for vesicular trafficking; InterPro: IPR018859 Endocytosis and intracellular transport involve several mechanistic steps: (1) for the internalisation of cargo molecules, the membrane needs to bend to form a vesicular structure, which requires membrane curvature and a rearrangement of the cytoskeleton; (2) following its formation, the vesicle has to be pinched off the membrane; (3) the cargo has to be subsequently transported through the cell and the vesicle must fuse with the correct cellular compartment

Probab=84.88  E-value=43  Score=35.99  Aligned_cols=98  Identities=17%  Similarity=0.185  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccChhhHHhhhhhhhhhHHHHHHHHHhcccccccCCCcccch
Q 007071          451 IWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTNSLLGATEALKASTLRLPVVGKAIADV  530 (619)
Q Consensus       451 Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~LEeW~~LE~ehsssLs~a~eaL~AatlRLPv~~GAkaD~  530 (619)
                      |-.-...+.++|+.|..+|+++.-+|.++|..     .-+-.++          .+...+|.++-               
T Consensus       187 Ln~~~~~a~k~RkkV~~sRL~~D~~R~~~k~~-----~~pekee----------~~r~~lE~aED---------------  236 (289)
T PF10455_consen  187 LNTDFKKANKARKKVENSRLQFDAARANLKNK-----AKPEKEE----------QLRVELEQAED---------------  236 (289)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CCcccCH----------HHHHHHHHHHH---------------
Confidence            44444567789999999999999999998875     0111111          11111222211               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007071          531 QNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKEMALLEQCKDFSSTLS  590 (619)
Q Consensus       531 ~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va~qE~~lLeEC~eLL~~~a  590 (619)
                       ++..+...||.+|+.|.           +-...+..|...+.-..+..+.|-++|..+.
T Consensus       237 -eFv~aTeeAv~~Mk~vl-----------~~~e~l~~Lk~lv~AQl~Yhk~aae~L~~~~  284 (289)
T PF10455_consen  237 -EFVSATEEAVEVMKEVL-----------DNSEPLRLLKELVKAQLEYHKKAAEALSELL  284 (289)
T ss_pred             -HHHHHHHHHHHHHHHHh-----------cCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             55666677777777754           3355667788888889999999999998764

Members of the Amphiphysin protein family are key regulators in the early steps of endocytosis, involved in the formation of clathrin-coated vesicles by promoting the assembly of a protein complex at the plasma membrane and directly assist in the induction of the high curvature of the membrane at the neck of the vesicle. Amphiphysins contain a characteristic domain, known as the BAR (Bin-Amphiphysin-Rvs)-domain, which is required for their in vivo function and their ability to tubulate membranes []. The crystal structure of these proteins suggest the domain forms a crescent-shaped dimer of a three-helix coiled coil with a characteristic set of conserved hydrophobic, aromatic and hydrophilic amino acids. Proteins containing this domain have been shown to homodimerise, heterodimerise or, in a few cases, interact with small GTPases. This entry identifies several fungal BAR domain proteins, such as Gvp36, that are not found by IPR004148 from INTERPRO [].

>TIGR03017 EpsF chain length determinant protein EpsF

Probab=84.28  E-value=68  Score=34.96  Aligned_cols=143  Identities=19%  Similarity=0.134  Sum_probs=85.1

Q ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccCh-hhHHhhhhhhhhhHHHH
Q 007071          431 FVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYL-EEWALLDKDHTNSLLGA  509 (619)
Q Consensus       431 FaNARAeaa~~~q~~~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~L-EeW~~LE~ehsssLs~a  509 (619)
                      |+++.-+..+..+...+++.+=++...+.++++.+....-+|+..|++.++..+ ..|..+. ++-..|+.+...+-...
T Consensus       153 ~~~~y~~~~~~~~~~~~~~~~~fl~~ql~~~~~~l~~ae~~l~~fr~~~~i~~~-~~~~~~~~~~l~~l~~~l~~~~~~~  231 (444)
T TIGR03017       153 FAQAYIDTNIELKVEPAQKAALWFVQQIAALREDLARAQSKLSAYQQEKGIVSS-DERLDVERARLNELSAQLVAAQAQV  231 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-CcccchHHHHHHHHHHHHHHHHHHH
Confidence            444555555566677777888888999999999999999999999999988754 3333332 33444444433222222


Q ss_pred             HHHHHh---c--ccccccCCCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHH
Q 007071          510 TEALKA---S--TLRLPVVGKAIADVQNLKDAISSALDVMQAMASSICLLSSKVENMNSLTAELMSVTAKE  575 (619)
Q Consensus       510 ~eaL~A---a--tlRLPv~~GAkaD~~slk~AL~sAvdvMq~i~ssi~~llpKvee~~~lvSELa~Va~qE  575 (619)
                      .++..-   .  ..-+|-. ..-..++.++.-|.....-+.++......-.|+|.++...+.+|-.-..+|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~l~~le~~l~~l~~~y~~~hP~v~~l~~~i~~l~~~l~~e  301 (444)
T TIGR03017       232 MDASSKEGGSSGKDALPEV-IANPIIQNLKTDIARAESKLAELSQRLGPNHPQYKRAQAEINSLKSQLNAE  301 (444)
T ss_pred             HHHHHHHhccCCcccchhh-hcChHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            211110   0  0001211 011224456666666666666676666777777777776666665554444

Sequences in this family of proteins are members of the chain length determinant family (pfam02706) which includes the wzc protein from E.coli. This family of proteins are homologous to the EpsF protein of the methanolan biosynthesis operon of Methylobacillus species strain 12S. The distribution of this protein appears to be restricted to a subset of exopolysaccharide operons containing a syntenic grouping of genes including a variant of the EpsH exosortase protein. Exosortase has been proposed to be involved in the targetting and processing of proteins containing the PEP-CTERM domain to the exopolysaccharide layer.

>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional

Probab=80.95  E-value=60  Score=38.40  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=58.7

Q ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHhhcccChhhHHhhhhhhhh
Q 007071          431 FVNARADATFMVQQLNAEKNIWNAWVTISELRNSVTLKRIKLLLVKKKLKLTSILKGQFPYLEEWALLDKDHTN  504 (619)
Q Consensus       431 FaNARAeaa~~~q~~~AE~~Ly~~W~~is~LR~sVa~KRieLq~lkq~~KL~~IL~~Qm~~LEeW~~LE~ehss  504 (619)
                      ++++.-+..+..+...+++.+=++..++.++++.+....-+|+..|++.++..+-.....+|++-..||.+...
T Consensus       249 la~~Yi~~~l~~k~~~a~~a~~fL~~qL~~l~~~L~~aE~~l~~fr~~~~~~d~~~ea~~~l~~~~~l~~ql~~  322 (726)
T PRK09841        249 IANNYLQQNIARQAAQDSQSLEFLQRQLPEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNE  322 (726)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            45555566777788888999999999999999999999999999999998876544444567777777776554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	619
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.4 bits (174), Expect = 5e-13
 Identities = 63/417 (15%), Positives = 127/417 (30%), Gaps = 123/417 (29%)

Query: 285 RGIIVSARF---WQETN--SRLRRLQDPGSPLSTSPGSRTSNPSKFLQSKRFSSDSAVST 339
           + I+            +  S   RL      L +               ++F  +  +  
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWT---LLSKQEE---------MVQKFV-EEVLRI 89

Query: 340 PPRTMASPIRGANR-PSSP--------NKSWNTPCMSPSRGIPSP---ARVRN------- 380
             + + SPI+   R PS          ++ +N   +     +       ++R        
Sbjct: 90  NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149

Query: 381 -------GVGGILSGNSSNTPSIL-SFSVDLKRG------KMGEDRIVDAHMLRLLHNRY 426
                  GV G  SG +     +  S+ V  K         +      +  +L +L    
Sbjct: 150 AKNVLIDGVLG--SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET-VLEMLQKLL 206

Query: 427 LQWRF-VNARADATFMV-QQLNAEK--------------------NIWNAWVTISELRNS 464
            Q      +R+D +  +  ++++ +                    N+ NA        N+
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW-----NA 261

Query: 465 VTLKRIKLLLVKKKLKLTSILKGQFPY---LEEWAL-LDKDHTNSLLGA----------T 510
             L   K+LL  +  ++T  L         L+  ++ L  D   SLL             
Sbjct: 262 FNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 511 EALKASTLRLPVVGKAIADV----QNLKDAISSALDVMQAMASSICLLSSKV-------- 558
           E L  +  RL ++ ++I D      N K      L     + SS+ +L            
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT--TIIESSLNVLEPAEYRKMFDRL 378

Query: 559 ----ENMNSLTAELMSV------TAKEMALLEQCKDFSSTLSALQIKDCSLRTHIIQ 605
                + + +   L+S+       +  M ++ +   +S  L   Q K+ ++    I 
Sbjct: 379 SVFPPSAH-IPTILLSLIWFDVIKSDVMVVVNKLHKYS--LVEKQPKESTISIPSIY 432

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 3e-06
 Identities = 89/574 (15%), Positives = 160/574 (27%), Gaps = 184/574 (32%)

Query: 68  KSHSQSQRFSSPLLSRSTNSSNLQSTF------PALGPKRSQSVDRRRPVTGSSPRATTP 121
           K     Q+F   +L    N   L S        P++   R     R R    +   A   
Sbjct: 74  KQEEMVQKFVEEVLR--INYKFLMSPIKTEQRQPSM-MTRMYIEQRDRLYNDNQVFAKYN 130

Query: 122 VPSSKQSQELSTATK------------M-------LITST-RSLSV--SFQGEAFSLPVS 159
           V   +   +L  A              +       +      S  V      + F L + 
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 160 K-TKAKATPERRRGTPVR-DQPWPGRSRQGNPSLSRSLDCSVEGKKFVGFGSGAVAKSLN 217
                +   E  +    + D  W  RS   +    R      E ++ +       +K   
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL------KSKPYE 244

Query: 218 QSLIENESRLNLDLDNAKQNKDGNLL--VSESCD-LVTSDD---TDSVSSGST-NTSGVP 270
             L        L L N +   +       + SC  L+T+     TD +S+ +T + S   
Sbjct: 245 NCL--------LVLLNVQ---NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 271 ESGGALASRMKNGARGIIVSARFWQETNSRLRRLQDPGSPLSTS-------PGSRTSNPS 323
            S       +K+      +  ++       L R     +P   S        G  T +  
Sbjct: 294 HSMTLTPDEVKS------LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347

Query: 324 KFLQSKRFSSDSAVS----TPP------RTMA-----SPIRGANRPSSPNKS----WNTP 364
           K +   + ++    S     P         ++     + I        P       W   
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI--------PTILLSLIWFDV 399

Query: 365 CMSPSRGIPSPARVRNGVGGILS----------GNSSNTPSILSFSVDLKRGKMGE---- 410
                        +++ V  +++              +T SI S  ++LK     E    
Sbjct: 400 -------------IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446

Query: 411 DRIVDA---------------------------HM--------LRLLHNRYLQWRFVNA- 434
             IVD                            H+        + L    +L +RF+   
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK 506

Query: 435 -RADATFMVQQLNAEKNIWNAWVTISELRNSVT-LKRIKLLLVKKKLKLTSILK--GQF- 489
            R D+T              AW     + N++  LK  K  +     K   ++     F 
Sbjct: 507 IRHDST--------------AWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL 552

Query: 490 PYLEEWALLDKDHTN----SLLGATEALKASTLR 519
           P +EE  L+   +T+    +L+   EA+     +
Sbjct: 553 PKIEE-NLICSKYTDLLRIALMAEDEAIFEEAHK 585

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00