Citrus Sinensis ID: 007092

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------62
Protein Sequence
MPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAATGRHD
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccEEEEEEccccccccccccccHHcccHHHHcccccccccEEEEccccccccEEEEcccccEEEEEEEccccEEEcccccEEEEEccEEEEEEEccEEEEEEEEEEEEEcccccEEEEEEEEcccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccHHHHHHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHcHHcccHHccccHHcccHHHHHccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccEEEEEEEEcccccccccccccccccccEEcccccccccccEEEcccHHHHHHEEEEccccEEEEEEEcccccccccccEEEEEcccEEEEEEEccEEEEEEEEEEEEEccccEEEEEEEEEccccEcccHHHHHHHHHHHHHHHcccccHHHcccccccccccHccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MPPLQRAQLQQQQQQQMQMRQQMQQQQQGMqsanatkrpydsgvCARRLMQYLYHqrqrppdntIAYWRKFVAEYysprakkrwCLSLYdnvghhalgvfpqaamdawqcdicgsksgrgfeatfevlprlneikfgsgvidelmfldlprecrfpsgimmLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEEllprrlvaPQVNQLLQVAQKCQSTisesgsegisqqdlqtnSNMVLTAGRQLAKSLELqslndlgfskrYVRCLQISEVVSSMKDLINFCweqkvgpieglksfprHATAAKLQMQKMQEAEQLasvqglptdrnTLNKLIAlhpggmnnnmsnnyhmvgrgaLSGSAQAALALTNYQNLLMRqnsinsnpnslqqeaspsfsnsnqspsssfqgpasfipgsmqnlpvsgfssphlppqqpqqlqqrslsgnnllqqshpqssqgNQAMQQQMIQQLLQEMSnnnggvqqqslsgqangmmvrnglgfggnspaagappasapstsnvsgggvagpttsrsnsfkaatnseasapagnngfnQRAQDLQQNLHLQDDIDQDIANEftengffnndlddtmgwgmaatgrhd
Flexible Loop (DISEMBL)
MPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLyhqrqrppdntiAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENgffnndlddtMGWGMAATGRHD
Low Complexity Region (SEG)
MPPLqraqlqqqqqqqmqmrqqmqqqqqgmqSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTisesgsegisqqDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRgalsgsaqaalalTNYQNLLMRQNSINSNPNSLQQEAspsfsnsnqspsssfqGPASFIPGSMQNLPVSGFssphlppqqpqqlqqrslsGNNLLQQSHPqssqgnqamqqqmiqqllqemsNNNGGVQQQSLSGQANGMMVRNGLgfggnspaagappasapstsNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAqdlqqnlhlqddidqdIANEFTENGFFNNDLDDTMGWGMAATGRHD
Disordered region (IsUnstruct)
******************************************GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQ*******************************QLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSF*********************************NKLIALH***********YHMVGRGALSGSAQAALALTNYQNLL********************************************************************************************************************************************************************************************************DIANEFTENGFFNNDLDDTMGWG********
Disordered Region (DISOPRED)
********************************************CARRLMQ**************AYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVA************************************************************RYVRCLQISEVVSSM***************************************************************************************************************************************************************************************************************************************************************************************************************FTENGFFNNDLDDTM***********
Disordered Region (DISEMBL)
***************************************YDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVA******************DLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNP***********************GPASFIPGSMQNLPVSGF*****************LSGNN******************QMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSP*****************************************PAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAATGRHD
Disordered Region (DISPRO)
************************************KRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTIS**************NSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATA***************************************************************************************************************************************************************MQQQMIQQLLQEMSNNNG******L*GQANGMMVRNGLGFGGNSPAAGAPPASAPSTSN****GVAGPT****NS*********************AQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGW*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPPLQxxxxxxxxxxxxxxxxxxxxxxxxMQSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAATGRHD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	618	2.2.26 [Sep-21-2011]
Q8W234	877	Transcriptional corepress	no	no	0.436	0.307	0.585	1e-94
O74364	391	Adhesion defective protei	yes	no	0.398	0.629	0.254	2e-11

>sp|Q8W234|SEUSS_ARATH Transcriptional corepressor SEUSS OS=Arabidopsis thaliana GN=SEU PE=1 SV=1

 Score =  347 bits (890), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 161/275 (58%), Positives = 208/275 (75%), Gaps = 5/275 (1%)

Query: 40  YDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGV 99
           Y+ G+ A+RL QY+Y Q+ RP DN I +WRKFVAEY++P AKKRWC+S+Y + G    GV
Sbjct: 301 YEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGS-GRQTTGV 359

Query: 100 FPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGI 159
           FPQ   D W C+IC  K GRGFEAT EVLPRL +IK+ SG ++EL+++D+PRE +  SG 
Sbjct: 360 FPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNSSGQ 416

Query: 160 MMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQ 219
           ++LEY KA QESV+E LR+VR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQV+Q
Sbjct: 417 IVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQVSQ 476

Query: 220 LLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRC 279
           L   AQK Q     + ++  +  +LQ N NM + + RQLAK+LE+  +NDLG++KRYVRC
Sbjct: 477 LGSAAQKYQQAAQNATTDS-ALPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRC 535

Query: 280 LQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHA 314
           LQISEVV+SMKDLI++  E + GPIE L  FPR  
Sbjct: 536 LQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRT 570

DNA-binding adapter subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and LEUNIG to repress AGAMOUS expression.
Arabidopsis thaliana (taxid: 3702)

>sp|O74364|ADN1_SCHPO Adhesion defective protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=adn1 PE=3 SV=1

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 45/291 (15%)

Query: 43  GVCARRLMQY---LYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGV 99
           G    RL+QY   L    +    + I YWR+FV ++Y+ +   R+ +   D         
Sbjct: 18  GYGVLRLLQYNEQLMSGWESTMKDDIGYWRRFVHDFYTEKGTFRYNIDYKD--------- 68

Query: 100 FPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGI 159
                          ++  + FE ++  LPR   + +   +      L   +E   P+  
Sbjct: 69  -------------SPNQEPKLFELSYAALPRFLYLSYCGKLKKMSFLLGNTKEFAIPNNG 115

Query: 160 MMLEYGKAVQESVYEQ-LRIVREGQLRIIFTND--LKILSWEFCARRHEELLPRRLVAPQ 216
             +E  +A     Y+  ++++  G LR  F     LK+ S EF A  H E L R L+   
Sbjct: 116 YFVESSRASILYQYQGGVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-N 174

Query: 217 VNQLLQVAQKCQSTISESG--SEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSK 274
            +  L  ++  Q+ I   G  SE  S + +  NS+         +  L    +N+ G   
Sbjct: 175 ASLALSQSRPPQNQIQHDGVKSEDPSSESVNINSS---------SSLLPDSPVNEYGLEP 225

Query: 275 RYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAA--KLQMQK 323
             +R ++I+E +S M+DLI F   Q+ GP   L  F   ATA   + QMQK
Sbjct: 226 HIMRFMEITETISGMRDLIAFTLAQRSGPTSALHKF---ATALQQQHQMQK 273


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.128    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,663,064
Number of Sequences: 539616
Number of extensions: 9597153
Number of successful extensions: 107849
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 620
Number of HSP's that attempted gapping in prelim test: 53338
Number of HSP's gapped (non-prelim): 32331
length of query: 618
length of database: 191,569,459
effective HSP length: 124
effective length of query: 494
effective length of database: 124,657,075
effective search space: 61580595050
effective search space used: 61580595050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Probable transcriptional regulator involved in cell adhesion.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	618
224122440	873	predicted protein [Populus trichocarpa]	0.927	0.656	0.818	0.0
359490401	864	PREDICTED: uncharacterized protein LOC10	0.930	0.665	0.779	0.0
255539545	745	Transcriptional corepressor SEUSS, putat	0.923	0.766	0.809	0.0
356559869	879	PREDICTED: uncharacterized protein LOC54	0.923	0.649	0.743	0.0
356559867	869	PREDICTED: uncharacterized protein LOC10	0.920	0.654	0.753	0.0
449451755	864	PREDICTED: uncharacterized protein LOC10	0.959	0.686	0.692	0.0
449522406	860	PREDICTED: uncharacterized protein LOC10	0.936	0.673	0.7	0.0
356530901	858	PREDICTED: uncharacterized protein LOC10	0.911	0.656	0.718	0.0
49523571	841	SEU1 protein [Antirrhinum majus]	0.883	0.649	0.689	0.0
449446059	786	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.898	0.706	0.690	0.0

>gi|224122440|ref|XP_002318837.1| predicted protein [Populus trichocarpa] gi|222859510|gb|EEE97057.1| predicted protein [Populus trichocarpa]

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/583 (81%), Positives = 521/583 (89%), Gaps = 10/583 (1%)

Query: 33  ANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNV 92
           A+A KRP+D G+CARRLMQYLYHQRQR  +NTIAYWRKFV+EYYSPRAKKRWCLSLY+NV
Sbjct: 299 ASALKRPFDGGICARRLMQYLYHQRQRLAENTIAYWRKFVSEYYSPRAKKRWCLSLYENV 358

Query: 93  GHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRE 152
           GHHALGVFPQAAM+AWQCD+CGSKSGRGFEATFEVLPRLNEIKFGSGVIDEL+FLDLPRE
Sbjct: 359 GHHALGVFPQAAMEAWQCDLCGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRE 418

Query: 153 CRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRL 212
            R  SGIMMLEY KAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCARRHEELLPRR+
Sbjct: 419 FRLHSGIMMLEYAKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCARRHEELLPRRV 478

Query: 213 VAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGF 272
           VAPQVNQLLQVAQKCQSTI+ESGS+G+SQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGF
Sbjct: 479 VAPQVNQLLQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGF 538

Query: 273 SKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLAS 332
           SKRYVRCLQISEVV+SMKDLI+FC EQK GPIEGLKS+PRHATAAKLQMQKMQE EQLAS
Sbjct: 539 SKRYVRCLQISEVVNSMKDLIDFCREQKAGPIEGLKSYPRHATAAKLQMQKMQEMEQLAS 598

Query: 333 VQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNS 392
           VQGLPTDRNT+NKL+ALHP G+NN++++N  MVGRGALSGSAQAALALTNYQNLLMRQNS
Sbjct: 599 VQGLPTDRNTINKLMALHP-GINNHVNSNNQMVGRGALSGSAQAALALTNYQNLLMRQNS 657

Query: 393 INSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQ 452
           +NSN  SLQQEA+  FSNSNQSPSS+FQG A+FI GSMQNLPVSGFSSPH PPQQPQQLQ
Sbjct: 658 MNSNSCSLQQEAASPFSNSNQSPSSNFQGAANFIQGSMQNLPVSGFSSPHPPPQQPQQLQ 717

Query: 453 QRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNN-GGVQQQSLSGQA-NGMMVR 510
           QRSLS N+LLQQS P+SS GNQ +Q QMI QLLQEMSNN+ GGVQQ S+S Q+ NG + R
Sbjct: 718 QRSLSSNSLLQQSLPRSSHGNQTLQPQMIHQLLQEMSNNSGGGVQQHSISRQSGNGGVAR 777

Query: 511 NGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQ 570
            GLGFG NS  A AP A   ST +VS G   GP  S+SNSFKA  NS++SA  GN+GFNQ
Sbjct: 778 MGLGFGSNS-MATAPTA---STVSVSAG---GPAPSQSNSFKAPANSDSSAAGGNSGFNQ 830

Query: 571 RAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 613
           +  DL QNLHLQDDI  DIA+EFTENGFFN+DLDD MG+G  A
Sbjct: 831 KVPDLPQNLHLQDDIVSDIAHEFTENGFFNSDLDDNMGYGWKA 873

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490401|ref|XP_002279763.2| PREDICTED: uncharacterized protein LOC100265879 [Vitis vinifera]

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/594 (77%), Positives = 515/594 (86%), Gaps = 19/594 (3%)

Query: 29  GMQSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSL 88
           GMQ  +A KRPYDSGVCARRLMQYLYHQRQ  PD TIAYWRKFVAEYYSPRAKKRWCLSL
Sbjct: 281 GMQPISAMKRPYDSGVCARRLMQYLYHQRQ--PDKTIAYWRKFVAEYYSPRAKKRWCLSL 338

Query: 89  YDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLD 148
           YDNVG+HALGVFPQAAMDAW C+IC SKSGRGFEATFEVLPRLNEIKFGSGVIDEL+FLD
Sbjct: 339 YDNVGNHALGVFPQAAMDAWHCEICNSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLD 398

Query: 149 LPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELL 208
           LPRECRF SGIMMLEYGKAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCA+ HEELL
Sbjct: 399 LPRECRFSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTPDLKILSWEFCAQHHEELL 458

Query: 209 PRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLN 268
           PRRLVAPQVNQL+QVAQKCQSTI+ESGS+GISQQDLQTNSNMVLTAGRQLA+SLE QSLN
Sbjct: 459 PRRLVAPQVNQLVQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRQLARSLESQSLN 518

Query: 269 DLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAE 328
           DLGFSKRYVRCLQISEVV+SMKDLI+FC E KVGPI+GLKS+PRHA+A KL+MQKMQE E
Sbjct: 519 DLGFSKRYVRCLQISEVVNSMKDLIDFCRENKVGPIDGLKSYPRHASAVKLEMQKMQEME 578

Query: 329 QLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLM 388
           QLA+VQGLPTDRNTLNKLIALHP G+N++MSNN HMV RGALSGSAQAALALTNYQNLLM
Sbjct: 579 QLANVQGLPTDRNTLNKLIALHP-GLNSHMSNNPHMVNRGALSGSAQAALALTNYQNLLM 637

Query: 389 RQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPP--- 445
           RQNS+NSNP+SLQQE   SF++SNQSPSS+FQGPA+ I GSM NLP SGFSSPHLPP   
Sbjct: 638 RQNSMNSNPSSLQQEGPSSFNSSNQSPSSTFQGPATLISGSMHNLPGSGFSSPHLPPQQQ 697

Query: 446 ----QQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNG-GVQQQSL 500
               QQ QQ QQRSL+ ++LLQQ+   SSQ +QA+QQQMIQQ+LQEM+NN G G+QQQSL
Sbjct: 698 QQQQQQQQQQQQRSLNPSSLLQQNPGLSSQSSQALQQQMIQQMLQEMTNNCGPGMQQQSL 757

Query: 501 SGQ-ANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEA 559
           SGQ  NG M R+G+GFG NS AA     ++P+ S    G + GP  S+SNSFK   NS++
Sbjct: 758 SGQNVNGSMTRSGMGFGNNSAAAT---VASPNLS----GSIGGPPLSKSNSFKGPLNSDS 810

Query: 560 SAPAGNNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 613
           SA   N+GFNQ+A DL  NLHL D++ QDIA EF +NGFFN+DL+D M +G  A
Sbjct: 811 SAGGANSGFNQKASDLAHNLHLSDEMVQDIAREFPDNGFFNSDLEDNMSYGWKA 864

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539545|ref|XP_002510837.1| Transcriptional corepressor SEUSS, putative [Ricinus communis] gi|223549952|gb|EEF51439.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/583 (80%), Positives = 520/583 (89%), Gaps = 12/583 (2%)

Query: 33  ANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNV 92
           A+A KRPYD G+CARRLMQYLYHQRQRP +N+IAYWRKFVAEYYSPRAKKRWCLSLYDNV
Sbjct: 173 ASAIKRPYDGGICARRLMQYLYHQRQRPAENSIAYWRKFVAEYYSPRAKKRWCLSLYDNV 232

Query: 93  GHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRE 152
           GHHALGVFPQAAM+AWQCDICGSKSGRGFEATFEVLPRL+EIKFGSGVIDEL+FLDLPRE
Sbjct: 233 GHHALGVFPQAAMEAWQCDICGSKSGRGFEATFEVLPRLDEIKFGSGVIDELLFLDLPRE 292

Query: 153 CRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRL 212
           CRFPSGIMMLEYGKAVQESVYEQLR+VREGQLRIIFT+DLKILSWEFCARRHEELLPRR+
Sbjct: 293 CRFPSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTHDLKILSWEFCARRHEELLPRRV 352

Query: 213 VAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGF 272
           VAPQVNQL+QVAQKCQSTI+ESG++G+SQQDLQTNSNMVLTAGRQLAK+LELQSLNDLGF
Sbjct: 353 VAPQVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKTLELQSLNDLGF 412

Query: 273 SKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLAS 332
           SKRYVRCLQISEVV+SMKDLI+FC EQ VGPIEGLKS+PRH + AKLQMQKMQE EQLA+
Sbjct: 413 SKRYVRCLQISEVVNSMKDLIDFCREQNVGPIEGLKSYPRHTSVAKLQMQKMQEMEQLAN 472

Query: 333 VQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNS 392
           VQGLPTDRNTLNKL+ALHP G+NN+MSNN+HM  RGALSGSAQAALALTNYQNLLMRQNS
Sbjct: 473 VQGLPTDRNTLNKLMALHP-GINNHMSNNHHMANRGALSGSAQAALALTNYQNLLMRQNS 531

Query: 393 INSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQ 452
           + SN +SLQQEA+ SF+NSNQ+PSS+FQGP +F+ GS+QNLPVSGFSSP +     Q  Q
Sbjct: 532 MTSNSSSLQQEAASSFNNSNQNPSSNFQGPGAFVAGSLQNLPVSGFSSPQI--PPQQPQQ 589

Query: 453 QRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNN-GGVQQQSLSGQ-ANGMMVR 510
           QRSLS N LLQQ+HPQSS  NQA QQQMIQQLLQEMSNN+ GGVQQ SLSGQ  NG M R
Sbjct: 590 QRSLSSNGLLQQNHPQSSPSNQASQQQMIQQLLQEMSNNSGGGVQQHSLSGQNQNGNMAR 649

Query: 511 NGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNGFNQ 570
           NG+GF  NS  A   P  AP+ S    G VAGP  SRSNSFKAA+NS++SA  GN+ FNQ
Sbjct: 650 NGVGFRSNSSDA---PTPAPTVS----GSVAGPAPSRSNSFKAASNSDSSAAGGNSNFNQ 702

Query: 571 RAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 613
           + Q+L  NLHLQDDI  DIA+EFTENGFFN+DLDD MG+G  A
Sbjct: 703 KVQELPHNLHLQDDIVPDIAHEFTENGFFNSDLDDNMGYGWKA 745

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559869|ref|XP_003548219.1| PREDICTED: uncharacterized protein LOC547529 [Glycine max]

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/589 (74%), Positives = 495/589 (84%), Gaps = 18/589 (3%)

Query: 30  MQSANATKRPYDS---GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCL 86
           MQ ++  KRPYDS   GVCARRLMQYLYHQRQRP DN+IAYWRKFVAEYYSPRAKKRWCL
Sbjct: 304 MQPSSVVKRPYDSSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCL 363

Query: 87  SLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMF 146
           SLY NVGHHALGVFPQA+MDAW CDICGSKSGRGFEAT+EVLPRLNEIKFGSGVIDEL+F
Sbjct: 364 SLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLF 423

Query: 147 LDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEE 206
           LD+PRE RF SG MMLEYGKAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCAR HEE
Sbjct: 424 LDMPREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARCHEE 483

Query: 207 LLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQS 266
           LLPRRLVAPQVNQL+QVA+KCQSTI+ESGS+G+SQQD+QTNSNM+LTAG QLAK LE+QS
Sbjct: 484 LLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNSNMLLTAGGQLAKILEMQS 543

Query: 267 LNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQE 326
           LN+LGFSKRYVRCLQISEVV+SMKDLI+ C + K+G IE LK+FPR ATA+K+QMQKMQE
Sbjct: 544 LNELGFSKRYVRCLQISEVVNSMKDLIDICADHKIGAIESLKNFPRLATASKVQMQKMQE 603

Query: 327 AEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNL 386
            EQLA+VQGLPTDRNTLNKL+AL+P G+NN+++N ++MV RGALSGSAQAALAL NYQNL
Sbjct: 604 MEQLANVQGLPTDRNTLNKLMALNP-GLNNHINNPHNMVNRGALSGSAQAALALNNYQNL 662

Query: 387 LMRQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPA-SFIPGSMQNLPVSGFSSPH-LP 444
           LMRQNS+NS+P SLQ+E S SF+NSNQSPSS+ QG   + IPG MQN  VSGF SP   P
Sbjct: 663 LMRQNSMNSSPGSLQREGS-SFNNSNQSPSSALQGAGPALIPGPMQNSSVSGFPSPRLPP 721

Query: 445 PQQPQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQA 504
            QQ   LQQ SLS N LLQQ+H Q SQGNQA+QQQMI QLLQEMSNNNGGVQ QSL G +
Sbjct: 722 QQQQHHLQQPSLSANALLQQNHSQGSQGNQALQQQMIHQLLQEMSNNNGGVQPQSLGGPS 781

Query: 505 NGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAG 564
              M +N LGFGG+ P+          ++NV+G    GP  SR+NSFK   NS++SA  G
Sbjct: 782 -ANMAKNALGFGGHYPSLSG------GSANVTGNN--GP-MSRNNSFKTTANSDSSAAGG 831

Query: 565 NNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 613
           NNG NQR  ++ QNLHLQ D+ QDI NEFT+N F N+DLDD MG+G  A
Sbjct: 832 NNGLNQRTSEMPQNLHLQ-DVVQDIGNEFTDNPFLNSDLDDNMGFGWKA 879

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559867|ref|XP_003548218.1| PREDICTED: uncharacterized protein LOC100816886 [Glycine max]

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/589 (75%), Positives = 497/589 (84%), Gaps = 20/589 (3%)

Query: 33  ANATKRPYDSGV---CARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLY 89
           ++A KRPYDSGV   CARRLMQYLYHQRQRP DN+IAYWRKFVAEYYSPRAKKRWCLSLY
Sbjct: 293 SSAGKRPYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLY 352

Query: 90  DNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDL 149
            NVGHHALGVFPQAAMDAWQCD+CGSKSGRGFEAT+EVLPRLNEIKFGSGVIDEL+FLDL
Sbjct: 353 SNVGHHALGVFPQAAMDAWQCDMCGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDL 412

Query: 150 PRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLP 209
           PRE RFPSG+MMLEY KA+QESVYEQLR+VREGQLRIIFT DLKILSWEFCARRHEELLP
Sbjct: 413 PRETRFPSGVMMLEYAKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLP 472

Query: 210 RRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLND 269
           RRLVAPQVNQL+QVAQKCQSTI+ESG++G+SQQDLQTNSNMVLTAGRQLAK LELQSLND
Sbjct: 473 RRLVAPQVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLND 532

Query: 270 LGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQ 329
           LGFSKRYVRCLQISEVV+SMKDLI+ C E K+G IE LK++PR ATA+K QMQKMQE EQ
Sbjct: 533 LGFSKRYVRCLQISEVVNSMKDLIDICSEHKIGAIESLKNYPRLATASKGQMQKMQEMEQ 592

Query: 330 LASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMR 389
           LA+VQGLPTDRNTLNKL+ L+P G+NN+M+N  +MVGRGALSGSAQAALAL NYQNLLMR
Sbjct: 593 LANVQGLPTDRNTLNKLMTLNP-GLNNHMNNTNNMVGRGALSGSAQAALALNNYQNLLMR 651

Query: 390 QNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPA-SFIPGSMQNLPVSGFSSPHLPP--Q 446
           QNS+NS+P SLQ+E S SF+NSN SPSS+ QG   + IPGSMQN PV GF SPHL P  Q
Sbjct: 652 QNSMNSSPGSLQREGS-SFNNSNPSPSSALQGTGPALIPGSMQNSPVGGFPSPHLTPQQQ 710

Query: 447 QPQQLQQRSLSGNNLLQQSHPQ-SSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQ-A 504
           Q Q LQQR+LS N LLQQ+H Q S       QQQMIQQLLQEMSNNNGG+Q QSL G  A
Sbjct: 711 QQQLLQQRTLSANGLLQQNHSQGSQGNQALQQQQMIQQLLQEMSNNNGGLQSQSLGGHNA 770

Query: 505 NGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAG 564
           NG + +N +GFGG++P+     A+ P  +            SR+NSFK A+NS++SA  G
Sbjct: 771 NGNISKNTMGFGGHTPSLSGGSANVPGNNR---------PISRNNSFKTASNSDSSAAGG 821

Query: 565 NNGFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 613
           NNGFNQR  D+QQNLHLQ D+ QDI NEF +N FFN+DLDD MG+   A
Sbjct: 822 NNGFNQRTSDMQQNLHLQ-DVAQDIGNEFLDNPFFNSDLDDNMGFSWKA 869

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451755|ref|XP_004143626.1| PREDICTED: uncharacterized protein LOC101207744 [Cucumis sativus]

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/621 (69%), Positives = 495/621 (79%), Gaps = 28/621 (4%)

Query: 1   MPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQRP 60
           +PPLQRA +QQQQQ Q++ + Q Q  Q      NA KRP+D GVCARRLMQYLYHQRQRP
Sbjct: 252 LPPLQRAHMQQQQQIQLRQQLQQQAIQ----PVNAMKRPHDGGVCARRLMQYLYHQRQRP 307

Query: 61  PDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRG 120
            DN+IAYWRKFV EYYSPRAKKRWCLSLY+NVGHHALGVFPQAAMDAWQCDICGSKSGRG
Sbjct: 308 ADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRG 367

Query: 121 FEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVR 180
           FEA+FEVLPRLNEIKFGSGVIDEL+FLD+PRE R+ SGIMMLEYGKAVQESVYEQLR+VR
Sbjct: 368 FEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVVR 427

Query: 181 EGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGIS 240
           EGQLRIIFT++LKIL+WEFCARRHEELLPRRLVAPQVNQL+QVAQKCQSTI+E G++G S
Sbjct: 428 EGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGTDGAS 487

Query: 241 QQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQK 300
           QQDLQ NSNMVLTAG+QLAKSLELQSLNDLGFSKRYVRCLQISEVV+SMKDLI+FC EQK
Sbjct: 488 QQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQK 547

Query: 301 VGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSN 360
            GP+EGLKS+P+HAT AKLQMQKMQE EQ+A+ QGLPTDR+TL ++++LHP G+NN M++
Sbjct: 548 TGPVEGLKSYPQHAT-AKLQMQKMQEIEQVANAQGLPTDRSTLGRMVSLHP-GLNNQMNS 605

Query: 361 NYHMVGRGALSGSAQAALALTNYQNLLMRQNSINS-NPNSLQQEASPSFSNSNQSPSSSF 419
              +  RG LSGSAQAALAL+NYQNLLMRQNS+NS + ++LQQE S SF+ +NQSPSSSF
Sbjct: 606 QNQLASRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQQETSSSFNTTNQSPSSSF 665

Query: 420 QGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSL--SGNNLLQQSHPQSSQGNQAMQ 477
            G  +     MQNLP SG SSP+LP QQ Q   Q     + NNLL  S   ++  NQAMQ
Sbjct: 666 HGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTNNLLMHSTQGNTNNNQAMQ 725

Query: 478 QQMIQQLLQEMSNNNGG--------VQQQSLSGQANGMMVRNGL-GFGGNSPAAGAPPAS 528
            QMIQQLLQ +SNN+GG         QQQ LSG    + V     G+G ++ +  A   +
Sbjct: 726 HQMIQQLLQ-ISNNSGGGQPQQQPQPQQQPLSGSNTKVSVAGTYTGYGASNSSVTAAGTA 784

Query: 529 APSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAG--NNGFNQRAQDLQQNLHLQDDID 586
             S SN        P  SRSNSFK+A+  + SA      +GFNQR+ DL QNL L DDI 
Sbjct: 785 NASCSNT-------PAPSRSNSFKSASTGDVSAAGARSGSGFNQRSADLPQNLQLDDDII 837

Query: 587 QDIANEFTENGFFNNDLDDTM 607
           QDIA++FT+NGFFNNDLDD M
Sbjct: 838 QDIAHDFTDNGFFNNDLDDNM 858

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522406|ref|XP_004168217.1| PREDICTED: uncharacterized protein LOC101230748 [Cucumis sativus]

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/610 (70%), Positives = 487/610 (79%), Gaps = 31/610 (5%)

Query: 1   MPPLQRAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQRP 60
           +PPLQRA +QQQQQ Q++ + Q Q  Q      NA KRP+D GVCARRLMQYLYHQRQRP
Sbjct: 252 LPPLQRAHMQQQQQIQLRQQLQQQAIQ----PVNAMKRPHDGGVCARRLMQYLYHQRQRP 307

Query: 61  PDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRG 120
            DN+IAYWRKFV EYYSPRAKKRWCLSLY+NVGHHALGVFPQAAMDAWQCDICGSKSGRG
Sbjct: 308 ADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRG 367

Query: 121 FEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVR 180
           FEA+FEVLPRLNEIKFGSGVIDEL+FLD+PRE R+ SGIMMLEYGKAVQESVYEQLR+VR
Sbjct: 368 FEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVVR 427

Query: 181 EGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGIS 240
           EGQLRIIFT++LKIL+WEFCARRHEELLPRRLVAPQVNQL+QVAQKCQSTI+E G++G S
Sbjct: 428 EGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGTDGAS 487

Query: 241 QQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQK 300
           QQDLQ NSNMVLTAG+QLAKSLELQSLNDLGFSKRYVRCLQISEVV+SMKDLI+FC EQK
Sbjct: 488 QQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQK 547

Query: 301 VGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTDRNTLNKLIALHPGGMNNNMSN 360
            GP+EGLKS+P+HAT AKLQMQKMQE EQ+A+ QGLPTDR+TL ++++LHP G+NN M++
Sbjct: 548 TGPVEGLKSYPQHAT-AKLQMQKMQEIEQVANAQGLPTDRSTLGRMVSLHP-GLNNQMNS 605

Query: 361 NYHMVGRGALSGSAQAALALTNYQNLLMRQNSINS-NPNSLQQEASPSFSNSNQSPSSSF 419
              +  RG LSGSAQAALAL+NYQNLLMRQNS+NS + ++LQQE S SF+ +NQSPSSSF
Sbjct: 606 QNQLASRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSHALQQETSSSFNTTNQSPSSSF 665

Query: 420 QGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSL--SGNNLLQQSHPQSSQGNQAMQ 477
            G  +     MQNLP SG SSP+LP QQ Q   Q     + NNLL  S   ++  NQAMQ
Sbjct: 666 HGTTAITSAPMQNLPSSGLSSPNLPQQQSQVQHQLHQRPNTNNLLMHSTQGNTNNNQAMQ 725

Query: 478 QQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRNGLGFGGNSPAAGAPPASAPSTSNVSG 537
            QMIQQLLQ +SNN+G        G  N    RN      NS    A  A+A S SN   
Sbjct: 726 HQMIQQLLQ-ISNNSG-------EGNRNSNHNRN----TSNSSVTAAGTANA-SCSNT-- 770

Query: 538 GGVAGPTTSRSNSFKAATNSEASAPAG--NNGFNQRAQDLQQNLHLQDDIDQDIANEFTE 595
                P  SRSNSFK+A+  + SA      +GFNQR+ DL QNL L DDI QDIA++FT+
Sbjct: 771 -----PAPSRSNSFKSASTGDVSAAGARSGSGFNQRSADLPQNLQLDDDIIQDIAHDFTD 825

Query: 596 NGFFNNDLDD 605
           NGFFNNDLDD
Sbjct: 826 NGFFNNDLDD 835

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530901|ref|XP_003534017.1| PREDICTED: uncharacterized protein LOC100789452 [Glycine max]

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/586 (71%), Positives = 479/586 (81%), Gaps = 23/586 (3%)

Query: 33  ANATKRPYDS---GVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLY 89
           ++A KRPY+S   GVCARRLMQYLYHQRQRP DN+IAYWRKFVAEYYS RAKKRWCLSLY
Sbjct: 291 SSAVKRPYESSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSLRAKKRWCLSLY 350

Query: 90  DNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDL 149
            NVGHHALGVFPQA+MDAW CDICGSKSGRGFEAT+EVLPRLNEIKFGSGVIDEL+FLD+
Sbjct: 351 SNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDM 410

Query: 150 PRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLP 209
           PRE RF SG MMLEYGKAVQESVYEQLR+VREGQLRIIFT DLKILSWEFCARRHEELLP
Sbjct: 411 PREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLP 470

Query: 210 RRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLND 269
           RRLVAPQVNQL+QVA+KCQSTI+ESGS+G+SQQD+QTN NM+LTAG QLAK LE+QSLN+
Sbjct: 471 RRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNGNMLLTAGGQLAKILEMQSLNE 530

Query: 270 LGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQ 329
           LGFSKRYVRCLQISEVV+SMKDLI+ C E K+G IE LK++PR ATA+K QMQKMQE EQ
Sbjct: 531 LGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKHQMQKMQEMEQ 590

Query: 330 LASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMR 389
           L +VQ LPTD+NTLNKL+AL+P G+NN+++N+++MV RGALSGSAQAALAL NYQNLLMR
Sbjct: 591 LGNVQCLPTDQNTLNKLMALNP-GLNNHINNSHNMVNRGALSGSAQAALALNNYQNLLMR 649

Query: 390 QNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPA-SFIPGSMQNLPVSGF-SSPHLPPQQ 447
           QNS NS+P SLQ+E S SF+NSNQSPSS+ QG + + I GSMQN  VSGF S    P QQ
Sbjct: 650 QNSTNSSPGSLQREGS-SFNNSNQSPSSALQGASPALISGSMQNSSVSGFPSPHLPPQQQ 708

Query: 448 PQQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGM 507
              LQQRSLS N LLQQ+H  S       QQQMI QLLQEMSNNNGG+Q  SL G     
Sbjct: 709 QHHLQQRSLSSNALLQQNHHGSQGNQALQQQQMIHQLLQEMSNNNGGMQPLSLGGPN--- 765

Query: 508 MVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNG 567
             +N +GFGG++P+     A+ P        G  GP  SR NSFK A+NS++SA  GNN 
Sbjct: 766 -AKNAMGFGGHTPSLSGGSANVP--------GNNGP-MSRINSFKTASNSDSSAVGGNNR 815

Query: 568 FNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGWGMAA 613
           FNQR  D+ Q  HLQ ++ QDI NEFT+N F N+DLDD MG+G  A
Sbjct: 816 FNQRTSDMPQ--HLQ-NVVQDIGNEFTDNPFLNSDLDDNMGFGWKA 858

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49523571|emb|CAF18247.1| SEU1 protein [Antirrhinum majus]

 Score =  772 bits (1994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/583 (68%), Positives = 467/583 (80%), Gaps = 37/583 (6%)

Query: 29  GMQSANATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSL 88
           GMQ  +  KRPYD GVC+RRLMQYLYHQRQRP DNTIAYWRKFVAEYYSPRAKKRWCLSL
Sbjct: 290 GMQPGSGIKRPYDGGVCSRRLMQYLYHQRQRPADNTIAYWRKFVAEYYSPRAKKRWCLSL 349

Query: 89  YDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLD 148
           YDNVGHH+LGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDEL+FLD
Sbjct: 350 YDNVGHHSLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLD 409

Query: 149 LPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELL 208
           LPRECRFPSG+MMLEY KAVQES+YEQLR+VRE QLRIIFT DLKILSWEFCARRHEELL
Sbjct: 410 LPRECRFPSGMMMLEYAKAVQESIYEQLRVVRERQLRIIFTQDLKILSWEFCARRHEELL 469

Query: 209 PRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLN 268
           PRR+VAPQVN LLQVAQKCQSTISESG EG+SQ D+Q NS MV+TAGRQLA+SLELQSLN
Sbjct: 470 PRRVVAPQVNHLLQVAQKCQSTISESGPEGVSQPDIQANSAMVVTAGRQLARSLELQSLN 529

Query: 269 DLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAE 328
           DLGFSKRYVRCLQI+EVV+SMKD++NFC + KVGPIE LK+FPRHA+A K+QMQKM E E
Sbjct: 530 DLGFSKRYVRCLQIAEVVNSMKDVMNFCRDHKVGPIEALKTFPRHASATKVQMQKMHELE 589

Query: 329 QLASVQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLM 388
            +  +QGLPTDRN LNKL+ALHPGG+N+ M+NN  MVG+GA++GSAQAALAL+NYQN+LM
Sbjct: 590 -MGGLQGLPTDRNMLNKLMALHPGGLNSPMNNNQRMVGQGAMNGSAQAALALSNYQNMLM 648

Query: 389 RQNSINSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQP 448
           RQNS+NSN     QE S  FS S+Q PS+     +  + G++QN P  GF S   P QQ 
Sbjct: 649 RQNSMNSN-----QEPSSPFSTSSQPPSTPRS--SGILSGTVQNSPGRGFPSHQGPHQQQ 701

Query: 449 QQLQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSN-NNG-GVQQQSLSGQANG 506
            Q      SGN LL Q+    SQG+Q++QQQMIQQ+L +MSN NNG GVQQQS+S Q + 
Sbjct: 702 YQ------SGNGLLLQNQSMPSQGSQSLQQQMIQQMLHDMSNKNNGQGVQQQSISAQNS- 754

Query: 507 MMVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNN 566
                    GGN   AG+ P           G VA    +RSNSFK+A+N E+ +   N 
Sbjct: 755 ---------GGNVSRAGSGP-----------GNVASQPPNRSNSFKSASNGESPSAVSNV 794

Query: 567 GFNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGW 609
           GF+Q+  DL QNLH+ D++ QD  ++F+E+GFF++DLDD+M +
Sbjct: 795 GFSQKGTDLPQNLHISDEMVQDFGHDFSESGFFSSDLDDSMNF 837

Source: Antirrhinum majus

Species: Antirrhinum majus

Genus: Antirrhinum

Family: Plantaginaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446059|ref|XP_004140789.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101219560 [Cucumis sativus]

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/582 (69%), Positives = 471/582 (80%), Gaps = 27/582 (4%)

Query: 37  KRPYDSG-VCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHH 95
           + PYD+G VCARRLMQYLYHQRQRPP+N+IAYWRKFVAEYYSPRAKKRWCLSLY+NVGHH
Sbjct: 219 RPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHH 278

Query: 96  ALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRF 155
           ALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRL+EIKFGSGVIDEL+FLDLP+E RF
Sbjct: 279 ALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRF 338

Query: 156 PSGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAP 215
            SGIMMLEYGKA+QESVYEQLR++REGQLRI+FT DLKIL WEFCARRHEELLPRRLVAP
Sbjct: 339 ASGIMMLEYGKAIQESVYEQLRVIREGQLRIVFTQDLKILCWEFCARRHEELLPRRLVAP 398

Query: 216 QVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLT---AGRQLAKSLELQSLNDLGF 272
           QVNQL+QVAQKCQSTI+ESG +G+SQ+DLQTNSNM+ T   AGR L        LNDLGF
Sbjct: 399 QVNQLVQVAQKCQSTIAESGPDGVSQKDLQTNSNMLPTQCAAGRVLTX-----LLNDLGF 453

Query: 273 SKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLAS 332
           SKRYVRCLQISEVV+SMKDLI FC +QKVGPIEGLK++PRHATAAKLQMQKMQE EQL S
Sbjct: 454 SKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLVS 513

Query: 333 VQGLPTDRNTLNKLIALHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNS 392
           +QGLPTDRNT+NKL+ LHP  ++N+  NN+ M+GRG  SGSAQAALA+T YQN+LMRQNS
Sbjct: 514 IQGLPTDRNTINKLMTLHP-ELDNHGMNNHQMIGRGGFSGSAQAALAMTTYQNILMRQNS 572

Query: 393 INSNPNSLQQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQ-- 450
           +NSNP+  QQEAS SF+ SN +PS + QG  S IPGS+Q   V G+     P Q+  Q  
Sbjct: 573 MNSNPSPHQQEASSSFNTSNYNPSPTLQGSTSLIPGSVQTSSVGGYPGSQQPLQKQSQPP 632

Query: 451 LQQRSLSGNNLLQQSHPQSSQGNQAMQQQMIQQLLQEMSNN--NGGVQQQSLSG-QANGM 507
           LQQ   +   L+QQ+HPQ  QG+QA+QQQM  Q L +MSNN  +G +QQQ L+G  AN  
Sbjct: 633 LQQHPPNTGTLVQQNHPQMMQGSQALQQQM-IQQLLQMSNNSKSGSLQQQPLTGPNANRS 691

Query: 508 MVRNGLGFGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRSNSFKAATNSEASAPAGNNG 567
           + R G+ + GN+      PA    + N+SG  V GP  SRSNSFKAA+NSE+S  AGN+G
Sbjct: 692 IPRRGMAYVGNTSV----PAGV--SGNLSGSNVPGP--SRSNSFKAASNSESS--AGNSG 741

Query: 568 FNQRAQDLQQNLHLQDDIDQDIANEFTENGFFNNDLDDTMGW 609
           F+Q+A DL Q LH  + + +DI  +F E+GF NN+LD+ +G+
Sbjct: 742 FDQKASDLPQ-LHFPESLVEDIGQDFPESGFINNELDEHLGY 782

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	618
TAIR|locus:2174028	816	SLK2 "AT5G62090" [Arabidopsis	0.724	0.549	0.586	1.5e-138
TAIR|locus:2131804	748	SLK1 "SEUSS-like 1" [Arabidops	0.529	0.437	0.664	5.1e-130
TAIR|locus:504955415	685	SLK3 "SEUSS-like 3" [Arabidops	0.588	0.531	0.638	5.7e-129
TAIR|locus:2029137	877	SEU "seuss" [Arabidopsis thali	0.474	0.334	0.556	8e-89
POMBASE|SPBC30B4.03c	391	adn1 "adhesion defective prote	0.386	0.611	0.249	3e-06

TAIR|locus:2174028 SLK2 "AT5G62090" [Arabidopsis thaliana (taxid:3702)]

 Score = 1325 (471.5 bits), Expect = 1.5e-138, Sum P(2) = 1.5e-138
 Identities = 279/476 (58%), Positives = 323/476 (67%)

Query:    38 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAL 97
             RPY++ VCARRLMQYLYHQRQRP +++I YWRKFV EY+SPRAKKRWCLS YDNVGH AL
Sbjct:   285 RPYENSVCARRLMQYLYHQRQRPSESSIVYWRKFVTEYFSPRAKKRWCLSHYDNVGHSAL 344

Query:    98 GVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPS 157
             GV PQAA D WQCD+CGSKSGRGFEATF+VLPRLNEIKF SGV+DEL++L +P E R+ S
Sbjct:   345 GVSPQAATDEWQCDLCGSKSGRGFEATFDVLPRLNEIKFASGVLDELLYLGVPSERRYGS 404

Query:   158 GIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQV 217
             GIM+LEYGKAVQESVYE +R+VREG LRIIF+ +LKILSWEFC RRHEELLPRRLVAPQV
Sbjct:   405 GIMVLEYGKAVQESVYEHIRVVREGHLRIIFSQELKILSWEFCTRRHEELLPRRLVAPQV 464

Query:   218 NQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYV 277
             NQLLQVA+KCQST            DLQ NSNMV+ AGRQLAKSLE  SLNDLGFSKRYV
Sbjct:   465 NQLLQVAEKCQSTIDQSGSDGIHQQDLQANSNMVMAAGRQLAKSLESHSLNDLGFSKRYV 524

Query:   278 RCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLP 337
             RCLQISEVVSSMKD+I+FC +QKVGPIE LKS+P    A K QMQ+M   EQLA+ +GLP
Sbjct:   525 RCLQISEVVSSMKDMIDFCRDQKVGPIEALKSYPYRMKAGKPQMQEM---EQLAAARGLP 581

Query:   338 TDRNTLNKLIALHPGGMN---NNMSNNYHMVGRXXXXXXXXXXXXXTNYQNLLMRQNSIN 394
              DRN+LNKL+AL   G+N   NNMS    + G              TNYQ++LM+QN +N
Sbjct:   582 PDRNSLNKLMALRNSGINIPMNNMSGQGSLPG-----SAQAAAFALTNYQSMLMKQNHLN 636

Query:   395 SNPNS--LQQEAXXXXXXXXXXXXXXXXGPASFIPGSMQNLPVSGFXXXXXXXXXXXXXX 452
             S+ N+  +QQE                 G +  +PG + +  +SG               
Sbjct:   637 SDLNNTTIQQEPSRNRSASPSYQ-----GTSPLLPGFVHSPSISGVSSHLSPQRQMPSSS 691

Query:   453 XXXXXGNNLLQQSH---PXXXXXXXXXXXXXXXXXXXXXXNNNGGV--QQQSLSGQ 503
                   N   QQ H   P                      N+NGG   QQQSLSGQ
Sbjct:   692 Y-----NGSTQQYHQQPPSCSSGNQTLEQQMIHQIWQQMANSNGGSGQQQQSLSGQ 742

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:2131804 SLK1 "SEUSS-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1139 (406.0 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
 Identities = 222/334 (66%), Positives = 259/334 (77%)

Query:    38 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAL 97
             RPY+ GVCAR+LM YLYH +QRP +N I YWRKFVAEY+SPRAK+R CLS Y++ GHHAL
Sbjct:   182 RPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRAKQRLCLSQYESAGHHAL 241

Query:    98 GVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPS 157
             G+FPQAA D WQCD+CG+KSG+GFEATF+VL RL EIKF SG+IDEL++LD PRE RFP+
Sbjct:   242 GMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELLYLDHPRENRFPN 301

Query:   158 GIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQV 217
             G+MMLEY KAVQE+V+EQ R+VREG LRIIF+ DLKILSWEFCARRHEELL RRL+APQV
Sbjct:   302 GLMMLEYRKAVQETVHEQFRVVREGHLRIIFSQDLKILSWEFCARRHEELLLRRLIAPQV 361

Query:   218 NQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYV 277
             NQLLQVAQKCQST            DLQ+NSNMVL AGRQLAK +ELQSLNDLG+ KRY+
Sbjct:   362 NQLLQVAQKCQSTISESGSEGVSQQDLQSNSNMVLGAGRQLAKFMELQSLNDLGYPKRYI 421

Query:   278 RCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLP 337
             R LQISEVV SMKDL+NF  EQK+GPIEGLK         KLQ QKMQE EQ  +   + 
Sbjct:   422 RTLQISEVVKSMKDLMNFTGEQKIGPIEGLKRLLEQTVTVKLQKQKMQEMEQFGNNGAI- 480

Query:   338 TDRNTLNKLIALHPGGMN----NNMSNNYHMVGR 367
                  +   + L  G MN    NN +N++ +VGR
Sbjct:   481 --NGPVQAQMVLTSGTMNGSTGNNTNNHHQIVGR 512

GO:0005634 "nucleus" evidence=ISM

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:504955415 SLK3 "SEUSS-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1198 (426.8 bits), Expect = 5.7e-129, Sum P(3) = 5.7e-129
 Identities = 237/371 (63%), Positives = 280/371 (75%)

Query:    38 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHAL 97
             RPY+ GVCAR+LM YLYH +QRP +N I YWRKFVAEY+SPRAK+R CLS Y++VGHHAL
Sbjct:   154 RPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRAKQRLCLSQYESVGHHAL 213

Query:    98 GVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPS 157
             G+FPQAA D WQCD+CG+KSG+GFEATF+VL RL EIKF SG+IDEL++LD PRE RFP+
Sbjct:   214 GMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELLYLDHPRENRFPN 273

Query:   158 GIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQV 217
             G+MMLEY KAVQE+V+EQ R+VREG LRIIF+ DLKILSWEFCARRHEELL RRL+APQV
Sbjct:   274 GLMMLEYRKAVQETVHEQFRVVREGHLRIIFSPDLKILSWEFCARRHEELLLRRLIAPQV 333

Query:   218 NQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYV 277
             NQLLQVAQKCQST            D+Q+NSNMVL AGRQLAK +ELQSLNDLG+ KRY+
Sbjct:   334 NQLLQVAQKCQSTISESGSQGVSQQDIQSNSNMVLGAGRQLAKFMELQSLNDLGYPKRYI 393

Query:   278 RCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHATAAKLQMQKMQEAEQLAS---VQ 334
             R LQISEVV SMKDL+NF  E KVGP+EGLK         KLQ QKMQE EQ  +   + 
Sbjct:   394 RTLQISEVVKSMKDLMNFTGEHKVGPLEGLKQLLEQTATVKLQRQKMQEMEQFGNSGAMS 453

Query:   335 GLPTDRNTLNKLIALHPGGMNNNMSNNYH-MVGRXXXXXXXXXXXXXTNYQNLLMRQNSI 393
             G    + TL+       G   NN SNN+H +VGR             TNYQ++L+RQN++
Sbjct:   454 GPAQAQMTLSS--GTMSGSTANNNSNNHHQIVGRGAMNGSPQATAALTNYQSMLIRQNAM 511

Query:   394 NS-NPNSLQQE 403
             N+ N N+  QE
Sbjct:   512 NNQNSNTGNQE 522

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2029137 SEU "seuss" [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
 Identities = 167/300 (55%), Positives = 214/300 (71%)

Query:    37 KRPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHA 96
             K  Y+ G+ A+RL QY+Y Q+ RP DN I +WRKFVAEY++P AKKRWC+S+Y + G   
Sbjct:   298 KPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGS-GRQT 356

Query:    97 LGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFP 156
              GVFPQ   D W C+IC  K GRGFEAT EVLPRL +IK+ SG ++EL+++D+PRE +  
Sbjct:   357 TGVFPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNS 413

Query:   157 SGIMMLEYGKAVQESVYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQ 216
             SG ++LEY KA QESV+E LR+VR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQ
Sbjct:   414 SGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQ 473

Query:   217 VNQLLQVAQKCQSTXXXXXXXXXXXXDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRY 276
             V+QL   AQK Q              +LQ N NM + + RQLAK+LE+  +NDLG++KRY
Sbjct:   474 VSQLGSAAQKYQQAAQNATTDSALP-ELQNNCNMFVASARQLAKALEVPLVNDLGYTKRY 532

Query:   277 VRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRHA--TAAKLQMQKMQEAEQLASVQ 334
             VRCLQISEVV+SMKDLI++  E + GPIE L  FPR    ++A       Q ++QL   Q
Sbjct:   533 VRCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRTGPSSALPGPSPQQASDQLRQQQ 592

GO:0005634 "nucleus" evidence=ISM

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0060090 "binding, bridging" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0003677 "DNA binding" evidence=IDA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048467 "gynoecium development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA

POMBASE|SPBC30B4.03c adn1 "adhesion defective protein, predicted transcriptional regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 65/261 (24%), Positives = 114/261 (43%)

Query:    76 YSPRAKKRWCLSLYDNVGHHALGV---FPQAAMDAWQCDICGS--KSGRGFEATFEVLPR 130
             Y+ +    W  ++ D++G+    V   + +     +  D   S  +  + FE ++  LPR
Sbjct:    27 YNEQLMSGWESTMKDDIGYWRRFVHDFYTEKGTFRYNIDYKDSPNQEPKLFELSYAALPR 86

Query:   131 LNEIKFGSGVIDELMFL-DLPRECRFPSGIMMLEYGKAVQESVYEQ-LRIVREGQLRIIF 188
                + +  G + ++ FL    +E   P+    +E  +A     Y+  ++++  G LR  F
Sbjct:    87 FLYLSY-CGKLKKMSFLLGNTKEFAIPNNGYFVESSRASILYQYQGGVQVIVSGHLRAHF 145

Query:   189 TND--LKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTXXXXXXXXXXXXDLQT 246
                  LK+ S EF A  H E L R L+    N  L ++Q  +              D  +
Sbjct:   146 FRAPLLKLDSLEFSAVGHSEYLLRELMT---NASLALSQS-RPPQNQIQHDGVKSEDPSS 201

Query:   247 NSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEG 306
              S  + ++   L  S     +N+ G     +R ++I+E +S M+DLI F   Q+ GP   
Sbjct:   202 ESVNINSSSSLLPDS----PVNEYGLEPHIMRFMEITETISGMRDLIAFTLAQRSGPTSA 257

Query:   307 LKSFPRHATAAKLQMQKMQEA 327
             L  F   ATA + Q Q MQ++
Sbjct:   258 LHKF---ATALQQQHQ-MQKS 274


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      618       473   0.00099  118 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  285 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.39u 0.13s 35.52t   Elapsed:  00:00:02
  Total cpu time:  35.39u 0.13s 35.52t   Elapsed:  00:00:02
  Start:  Mon May 20 23:34:25 2013   End:  Mon May 20 23:34:27 2013

GO:0003712 "transcription cofactor activity" evidence=ISM

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISM

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IMP

GO:0071276 "cellular response to cadmium ion" evidence=IMP

GO:0071585 "detoxification of cadmium ion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00121153 hypothetical protein (874 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	618
pfam01803	230	pfam01803, LIM_bind, LIM-domain binding protein	6e-81

>gnl|CDD|216712 pfam01803, LIM_bind, LIM-domain binding protein

 Score =  254 bits (650), Expect = 6e-81
 Identities = 81/266 (30%), Positives = 118/266 (44%), Gaps = 40/266 (15%)

Query: 47  RRLMQYLYHQRQ-RPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM 105
            RL+++  H    R  D+ I+YW++FV E++SP A  R+ LS  D               
Sbjct: 2   LRLLEFNEHLSNFRGEDDDISYWQRFVHEFFSPDAVLRYSLSSEDGPEG----------- 50

Query: 106 DAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYG 165
                        + FE T   LPR     F SGV +  + LD  RE   P+G + +E  
Sbjct: 51  -------------KQFEITTPALPRYFRTIFESGVKELQLVLDGAREQVLPNGSIFVECP 97

Query: 166 KAVQESVYEQ-LRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVA 224
           KA     Y+   ++V EG LR  F  DLKI  W+FC R HEE +PR ++ P  + L    
Sbjct: 98  KASFIYWYDDGSQVVTEGTLRAHFDPDLKIEWWDFCTRSHEEYIPRSVLEPLASPL---- 153

Query: 225 QKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISE 284
                             +L  NS +    G Q   SL   ++   G  K  +R L+I+E
Sbjct: 154 ---------HTKSKQQSPELSKNSQLRQQKGPQPITSLPSSNVTRFGLPKAVMRFLEIAE 204

Query: 285 VVSSMKDLINFCWEQKV-GPIEGLKS 309
           ++S M+DL++F     +  P E LK 
Sbjct: 205 ILSPMQDLMSFSKANPILSPREALKQ 230

The LIM-domain binding protein, binds to the LIM domain pfam00412 of LIM homeodomain proteins which are transcriptional regulators of development. Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development. The Drosophila protein Chip is required for segmentation and activity of a remote wing margin enhancer. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions. Length = 230

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	618
PF01803	240	LIM_bind: LIM-domain binding protein; InterPro: IP	100.0
KOG2181	415	consensus LIM domain binding protein LDB1/NLI/CLIM	100.0

>PF01803 LIM_bind: LIM-domain binding protein; InterPro: IPR002691 The LIM-domain binding protein, binds to the LIM domain IPR001781 from INTERPRO of LIM homeodomain proteins which are transcriptional regulators of development

Probab=100.00  E-value=7.4e-64  Score=498.16  Aligned_cols=237  Identities=38%  Similarity=0.581  Sum_probs=211.0

Q ss_pred             HHHHHHHHHHHhCC-CCCCchhHHHHHHHHhcCCCccEEEEeeccCCCCCCccccccccccccccccccCCCCCceeEEc
Q 007092           46 ARRLMQYLYHQRQR-PPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEAT  124 (618)
Q Consensus        46 ~lRLlqfiehLs~r-p~~ndI~YW~kFV~EFFSP~AvlR~tls~~d~~g~~s~Gvfp~~a~d~w~cdic~sk~~K~FEIt  124 (618)
                      ++||++|+++|+++ ++++|++||++||+|||+|+|++|||++.+++.                       ..+|+|||+
T Consensus         1 ilRl~~~~~~l~~~~~~~~~~~yW~~fv~~fF~~~a~lr~~~~~~~~~-----------------------~~~k~FEi~   57 (240)
T PF01803_consen    1 ILRLLEFIERLSNFSPNLNDIEYWQKFVHEFFSPDAVLRISLWNEDGN-----------------------GSPKQFEIT   57 (240)
T ss_pred             CchHHHHHHHHHhhcCCCCcHHHHHHHHHHHcCCCeeEEEEEEcCCCC-----------------------CCCeeEEEc
Confidence            58999999999998 889999999999999999999999999643221                       125999999


Q ss_pred             ccchhHHHHHHhhcCcceEEEEeCCCcceecCCCcEEEEeCceEEEEEec-CeEEEEEEEEEEEeCcccceEEEEEeecc
Q 007092          125 FEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYE-QLRIVREGQLRIIFTNDLKILSWEFCARR  203 (618)
Q Consensus       125 ~~vLPRfF~t~FeSGV~~~qL~Ld~prE~~LpNGsi~lE~~KAs~~y~Ye-gs~Vv~~G~LRiiFd~~LKIEs~EF~~~s  203 (618)
                      +++|||||+++|++||++|+|++++++|++++||+|+|||+||+++|||+ |++|+++|+||++||++|||||||||+++
T Consensus        58 ~~~lPR~f~~~~~sGv~~~~~~l~~~~e~~l~ng~i~ie~~~~~~~~~y~~gs~v~~~G~lr~~f~~~lKIe~~df~~~~  137 (240)
T PF01803_consen   58 RPLLPRYFRTLFESGVKRMQLVLDGPREQVLPNGSIFIECPRATFIYWYEDGSQVVHEGQLRAQFDPDLKIEWWDFCTRS  137 (240)
T ss_pred             hHHHHHHHHHHhcCCceEEEEEecCCceEEcCCCeEEEEECCEEEEEEECCceEEEEEeEEEEEECccccEEEEEEEeec
Confidence            99999999999999999999999999999999999999999999999998 79999999999999999999999999999


Q ss_pred             eeccccccchhhhhHHHHHhhhhccccccccCCCCCChhhhhhhhhhhhhhhhhhccccccCCCCCCCcchhhhhHhhHH
Q 007092          204 HEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQIS  283 (618)
Q Consensus       204 HEEyIpR~~L~~qvn~Lie~aqK~Qs~i~es~s~g~s~~D~k~n~~m~~~k~rQLak~Lp~s~Vn~~Gip~~vmR~LQIa  283 (618)
                      |+|||+|++|++++.....+.++++...    ++....+|+.+++.....+.+++.+.||.++|+++|+|+++||||||+
T Consensus       138 ~~e~I~r~~l~~~~~~~~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~~~Lp~~~v~~~Gi~~~~mr~Lqi~  213 (240)
T PF01803_consen  138 HEEYIPRSALEQQASNLHPSVQIFQKLS----PDQKQSPDMSKNSKARQQKSPQLPPSLPSSNVNEFGIPERVMRCLQIA  213 (240)
T ss_pred             ccccCcHHHHHHhhccchhhhHHhhhcc----cccccccchhhhhhhhhhcccccCCCcccCCCCcCCCCHHHHHHHHHH
Confidence            9999999999998766555555554432    222345677777666656677888889999999999999999999999


Q ss_pred             HHHhchHHHHHHHHHhC-CCHHHHHhh
Q 007092          284 EVVSSMKDLINFCWEQK-VGPIEGLKS  309 (618)
Q Consensus       284 EVMS~MkdLm~FSk~nn-LsP~EALk~  309 (618)
                      |||++|+|||.|++.|+ +||+|||++
T Consensus       214 evms~M~~Lm~fs~~~~~~sP~eaL~~  240 (240)
T PF01803_consen  214 EVMSQMKDLMSFSKQNNILSPLEALEQ  240 (240)
T ss_pred             HHHHHHHHHHHHHHHcCCCCHHHHhcC
Confidence            99999999999999998 799999985

Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) P70662 from SWISSPROT is located in the nuclei of neuronal cells during development, it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons []. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development []. The Drosophila melanogaster protein Chip O18353 from SWISSPROT is required for segmentation and activity of a remote wing margin enhancer []. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development []. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions [].; GO: 0003712 transcription cofactor activity, 0005634 nucleus

>KOG2181 consensus LIM domain binding protein LDB1/NLI/CLIM [Transcription]

Probab=100.00  E-value=1.7e-32  Score=280.06  Aligned_cols=212  Identities=19%  Similarity=0.343  Sum_probs=187.6

Q ss_pred             CCcCcchHHHHHHHHHHHHhCCCCCCchhHHHHHHHHhcCCCccEEEEeeccCCCCCCccccccccccccccccccCCCC
Q 007092           38 RPYDSGVCARRLMQYLYHQRQRPPDNTIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKS  117 (618)
Q Consensus        38 ~py~~G~c~lRLlqfiehLs~rp~~ndI~YW~kFV~EFFSP~AvlR~tls~~d~~g~~s~Gvfp~~a~d~w~cdic~sk~  117 (618)
                      .+| ....-.||++++++|..+.+..|..||+.|..|||.++|+|.+++                          |.+++
T Consensus        44 ~~y-~s~~e~Ri~emNkRLq~~se~sdN~WWDaFstEFFeDDa~Lt~~f--------------------------clEdg   96 (415)
T KOG2181|consen   44 GNY-VSPLEFRIHEMNKRLQIFSEVSDNQWWDAFSTEFFEDDAKLTFVF--------------------------CLEDG   96 (415)
T ss_pred             CCC-cCcchhhHHHHHHHHHHhcccchhhhHHhhhhhhhcCCceEEEEE--------------------------EecCC
Confidence            355 455679999999999999999999999999999999999999876                          66788


Q ss_pred             CceeEEcccchhHHHHHHhhcCcceEEEEeCCCcceecCCCcEEEEeCceEEEEEec---CeEEEEEEEEEEE--eCccc
Q 007092          118 GRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYE---QLRIVREGQLRII--FTNDL  192 (618)
Q Consensus       118 ~K~FEIt~~vLPRfF~t~FeSGV~~~qL~Ld~prE~~LpNGsi~lE~~KAs~~y~Ye---gs~Vv~~G~LRii--Fd~~L  192 (618)
                      +|.|.|++.+|||||++.|++||++++++|..++|. +.||++.+||+.+++++.|.   -..|+.+|+|.+.  ||..+
T Consensus        97 pkRYtIgRtlIPrfFrsIfegG~~eLyyvLkh~ket-~hn~s~~~dcdq~~~iTqhgkp~ft~VctegrL~lEF~fDd~M  175 (415)
T KOG2181|consen   97 PKRYTIGRTLIPRFFRSIFEGGMRELYYVLKHPKET-LHNGSQAYDCDQVLQITQHGKPSFTEVCTEGRLYLEFAFDDVM  175 (415)
T ss_pred             cceeeeccchhHHHHHHHHhcchhhhhhhhcCchhh-hcCCceeeeccceeEEeecCCccceeeeccceEEEEeehhhhh
Confidence            999999999999999999999999999999999776 89999999999999999997   3999999999986  57889


Q ss_pred             ceEEEEEeecceeccccccchhhhhHHHHHhhhhccccccccCCCCCChhhhhhhhhhhhhhhhhhccccccCCCCCCCc
Q 007092          193 KILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGF  272 (618)
Q Consensus       193 KIEs~EF~~~sHEEyIpR~~L~~qvn~Lie~aqK~Qs~i~es~s~g~s~~D~k~n~~m~~~k~rQLak~Lp~s~Vn~~Gi  272 (618)
                      ||+.|+|.++.|.|+|+|+.|....       +.                |..        ...|+.|     ++++.|+
T Consensus       176 RIK~Wh~~ik~~rElvprsil~~~a-------~~----------------dp~--------~ldq~~k-----NitR~G~  219 (415)
T KOG2181|consen  176 RIKAWHLEIKRSRELVPRSILQNTA-------DY----------------DPE--------ALDQEQK-----NITRMGF  219 (415)
T ss_pred             hhhheeeeeeccccccchhhhhccC-------CC----------------Chh--------hhChhhc-----ccccccc
Confidence            9999999999999999999985311       10                111        1233333     6899999


Q ss_pred             chhhhhHhhHHHHHhchHHHHHHHHHhCCCHHHHHhhhHHh
Q 007092          273 SKRYVRCLQISEVVSSMKDLINFCWEQKVGPIEGLKSFPRH  313 (618)
Q Consensus       273 p~~vmR~LQIaEVMS~MkdLm~FSk~nnLsP~EALk~yv~~  313 (618)
                      ++.++.+|.+|.|+..|++||.-+|...|+|+||||..+-+
T Consensus       220 ~nsTlNylrlcvILePMQelMSrhKayalsPRdclKttLFQ  260 (415)
T KOG2181|consen  220 FNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQ  260 (415)
T ss_pred             chhhHHHHHHHHHHhHHHHHHHhccccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	618
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 9e-07
 Identities = 69/514 (13%), Positives = 135/514 (26%), Gaps = 174/514 (33%)

Query: 6   RAQLQQQQQQQMQMRQQMQQQQQGMQSANATKRPYDSGVCA-RRLMQYLYHQRQRPPDNT 64
              L+  Q+   Q+      +     +    K    S     RRL++   ++        
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSN---IKLRIHSIQAELRRLLKSKPYEN------- 245

Query: 65  IAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEAT 124
                               CL +  NV             +A                 
Sbjct: 246 --------------------CLLVLLNV------------QNAK---------------- 257

Query: 125 FEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRI-VREGQ 183
                            +   F +L   C+    I++    K V + +       +    
Sbjct: 258 ---------------AWN--AF-NL--SCK----ILLTTRFKQVTDFLSAATTTHISLDH 293

Query: 184 LRIIFTND--LKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQ 241
             +  T D    +L          + LPR       N          S I+ES  +G++ 
Sbjct: 294 HSMTLTPDEVKSLLL--KYLDCRPQDLPRE--VLTTNPRR------LSIIAESIRDGLAT 343

Query: 242 QD--LQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRC------LQISEVVSSMKDLI 293
            D     N + + T    +  SL    L    + K + R         I  ++ S+  + 
Sbjct: 344 WDNWKHVNCDKLTTI---IESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSL--I- 395

Query: 294 NFCWEQKVG--PIEGLKSFPRHATAAKLQMQKMQEAEQLASVQGLPTD-RNTLNKLIALH 350
              W   +    +  +    +++   K      Q  E   S+  +  + +  L    ALH
Sbjct: 396 ---WFDVIKSDVMVVVNKLHKYSLVEK------QPKESTISIPSIYLELKVKLENEYALH 446

Query: 351 --------------PGGMNNNMSNNY-------HMVGRGALSGSAQAALALTN-YQNL-L 387
                            +     + Y       H+          +        + +   
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN----IEHPERMTLFRMVFLDFRF 502

Query: 388 MRQ---------NSINSNPNSLQQ--EASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVS 436
           + Q         N+  S  N+LQQ     P   +++            F+P   +NL   
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL--- 559

Query: 437 GFSSPHLPPQQPQQLQQRSLS--GNNLLQQSHPQ 468
              S +        L + +L      + +++H Q
Sbjct: 560 -ICSKYT------DLLRIALMAEDEAIFEEAHKQ 586

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 39/271 (14%), Positives = 74/271 (27%), Gaps = 107/271 (39%)

Query: 14  QQQMQMRQQMQQQQQGMQSANATKRPYDSGVCARRLMQYLYHQRQ----RPPDNTIAYWR 69
              M +  ++ +      S    K+P +S                       +N  A  R
Sbjct: 402 SDVMVVVNKLHKY-----SL-VEKQPKES--------TISIPSIYLELKVKLENEYALHR 447

Query: 70  KFVAEYYSPRAKKRWCLSL-------YDNVGHHALGV--------FPQAAMD-AW-QCDI 112
             V  Y  P+      L         Y ++GHH   +        F    +D  + +  I
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507

Query: 113 CGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQES- 171
                   + A+  +L  L ++KF                           Y   + ++ 
Sbjct: 508 R--HDSTAWNASGSILNTLQQLKF---------------------------YKPYICDND 538

Query: 172 -VYEQLRIVREGQLRIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQST 230
             YE+L             N +     +F   + EE L     +   + LL++A      
Sbjct: 539 PKYERL------------VNAIL----DF-LPKIEENLIC---SKYTD-LLRIA------ 571

Query: 231 ISESGSEGISQQDLQT-NSNMVLTAGRQLAK 260
                        L   +  +   A +Q+ +
Sbjct: 572 -------------LMAEDEAIFEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 2e-06
 Identities = 70/523 (13%), Positives = 128/523 (24%), Gaps = 204/523 (39%)

Query: 23  MQQQQQGMQSA--NATKRPYDSGVCARRLMQYLYHQRQRPPDNTIAY-------WR--KF 71
           + +Q++ +Q       +  Y        LM  +  ++++P   T  Y       +   + 
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKF------LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 72  VAEYYSPRAKKRWCL--SLY-----DNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEAT 124
            A+Y   R +    L  +L       NV     G      +        G K+       
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLID--G------VLG-----SG-KT------- 164

Query: 125 FEVLPRLNEIKFGSGVIDELMFLDLPRECRFPSGIMMLEYGKAVQESVYEQLRIVREGQL 184
              +            +D    L    +C+    I  L                      
Sbjct: 165 --WV-----------ALDVC--LSYKVQCKMDFKIFWLNLKN------------------ 191

Query: 185 RIIFTNDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKCQSTISESGSEGISQQDL 244
                          C        P  ++      L Q+     S    S +  +    +
Sbjct: 192 ---------------CNS------PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 245 QTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVVSSMKDLINF---CWEQKV 301
           Q                     L  L  SK Y  CL +   V + K    F   C   K+
Sbjct: 231 Q-------------------AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC---KI 268

Query: 302 -------GPIEGLKSFPRHATAAKLQMQKMQ------EAEQL------ASVQGLPTDRNT 342
                     + L +    AT   + +          E + L         Q LP +  T
Sbjct: 269 LLTTRFKQVTDFLSA----ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 343 LN----KLIA--LHPGGMNNNMSNNYHMVGRGALSGSAQAALALTNYQNLLMRQNSINS- 395
            N     +IA  +  G       +N+  V    L+                + ++S+N  
Sbjct: 325 TNPRRLSIIAESIRDG---LATWDNWKHVNCDKLTT---------------IIESSLNVL 366

Query: 396 NPNSLQQEASPSFSNSNQSPSSSFQGPASF-----IPGSMQNLPVS-GFSSPHLPPQQPQ 449
            P   ++                F   + F     IP     L +               
Sbjct: 367 EPAEYRK---------------MFDRLSVFPPSAHIP--TILLSLIWFDVIKSDVMVVVN 409

Query: 450 QLQQRSL---SGNNL------LQQSHPQSSQGNQAMQQQMIQQ 483
           +L + SL              +        +   A+ + ++  
Sbjct: 410 KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 46.4 bits (109), Expect = 3e-05
 Identities = 20/154 (12%), Positives = 40/154 (25%), Gaps = 8/154 (5%)

Query: 401 QQEASPSFSNSNQSPSSSFQGPASFIPGSMQNLPVSGFSSPHLPPQQPQQLQQRSLSGNN 460
           ++   P         ++  Q PA F+P          +    +PPQ       +      
Sbjct: 5   KKRVYPQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTP 64

Query: 461 LLQQSHPQSSQGNQAMQQQMIQQLLQEMSNNNGGVQQQSLSGQANGMMVRN------GLG 514
             +Q H Q  Q   +M    +      + + N  +Q Q        +  +         G
Sbjct: 65  AQEQLHQQIDQATTSMNDMHLHN--VPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYG 122

Query: 515 FGGNSPAAGAPPASAPSTSNVSGGGVAGPTTSRS 548
               +      P +     ++        T    
Sbjct: 123 QPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTL 156

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	618
3iot_A	449	Maltose-binding protein, huntingtin fusion protei;	82.15

>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A

Probab=82.15  E-value=0.29  Score=50.86  Aligned_cols=6  Identities=67%  Similarity=0.722  Sum_probs=1.1

Q ss_pred             HHHHHH
Q 007092            8 QLQQQQ   13 (618)
Q Consensus         8 ~~~~~~   13 (618)
                      |.||||
T Consensus       386 ~~~~~~  391 (449)
T 3iot_A          386 SFQQQQ  391 (449)
T ss_dssp             HTC---
T ss_pred             hhcccc
Confidence            333333

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00