Citrus Sinensis ID: 007112

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
MLSVKRHTFLLSLQKLLLGRGERRVFALMESTTNTMVNGSDLDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR
ccccccHHHHHHHHHHHccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccccHHHHHHHHHHccccccEEEEEccccccHHHHHHccccccccEEEEEcccccccccccccccccccHHHHHHHHHcccccccccccEEEEcccccHHccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHHccccHHHHHccEEEEcccccEEcccccccccccccccccccccccHHHHHHHHcccEEEEEccccccccHHHHHHHHHcccccEEEEcccccccccccHHHHHHHccccEEEEEccccccEEEccEEEcccccccEEEcccHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccccccc
cccccccEEEEccHHcccccccccccEEHHHHHHHHcccccccccccccccccccccccccccccccccccEEEcccccHHHHccccccHHHccHHHHHHcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHcccHHHHHHHcHHHHccccccEEEEHHHcccHHHHHcccccccccEEEEEccccEcccEccHHHHHHHHHHHHHHHHHHHcccHHHEEEEEEEcccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHHcccccHHHHHHcHEEEEccccEEcEcccccccHHHccccEcccccccHHHHHHHHcccEEEEcccccccccHHHHHHHHHHccccEEEEccccHHHccccHHHHHHccccccEEEEccccccEEEccEEEccEEccHHHcHHHHHHHHHHHcEccccHHHHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccEccccccccHHHHHHHHcccccccccc
MLSVKRHTFLLSLQKLLLGRGERRVFALMESTtntmvngsdldnnnaaggggvvdvygedfatedqlitpwtvsvasgytllrdprhnkglaftenerDAHYLrgllppalmnQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEEllpvvytptvgeACQKYgsifrrpqglyisLKEKGKILEVLknwperniQVIVVTdgerilglgdlgcqgmgipvgKLSLYTalgglrpsaclpitidvgtnneqllndeFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSsshlvfnddiqGTASVVLAGILSALKlvggtladqtflflgageaGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLqhfkkpwahehapIKSLLDAVKAikptmlmgtsgvgkTFTKEVVEAMASfnekpvifalsnptsqsectaeeaytwskgqaifasgspfdpveyngkvfvpgqgnnayifpglgLGLIISGAIRVRDEMLLAASEALAAQVTQEhfdkgliyppftnIRKISAHIAAKVAAKAYDLglasrlprpkdlVSYAescmyspmyrsyr
MLSVKRHTFLLSLQKLLLGRGERRVFALMESttntmvngsdLDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVlknwperniqVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFkkpwahehapIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLglasrlprpkdlvsyaescmyspmyrsyr
MLSVKRHTFllslqklllGRGERRVFALMESTTNTMVNGSDLdnnnaaggggvvdvYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPglglglIISGAIRVRDEMllaasealaaQVTQEHFDKGLIYPPFTNIRkisahiaakvaakaYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR
******HTFLLSLQKLLLGRGERRVFALMESTTNTMVNG**LDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN******CTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMY********
***********************************************************DFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR
MLSVKRHTFLLSLQKLLLGRGERRVFALMESTTNTMVNGSDLDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN***********AYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR
*LSVKRHTF***L**L***********************************G***VYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYR***
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SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLSVKRHTFLLSLQKLLLGRGERRVFALMESTTNTMVNGSDLDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query617 2.2.26 [Sep-21-2011]
P51615591 NADP-dependent malic enzy no no 0.952 0.994 0.841 0.0
P12628589 NADP-dependent malic enzy N/A no 0.951 0.996 0.855 0.0
P36444647 NADP-dependent malic enzy N/A no 0.970 0.925 0.801 0.0
P43279639 NADP-dependent malic enzy no no 0.917 0.885 0.830 0.0
P34105591 NADP-dependent malic enzy no no 0.952 0.994 0.817 0.0
Q9XGZ0588 NADP-dependent malic enzy yes no 0.949 0.996 0.808 0.0
P22178648 NADP-dependent malic enzy N/A no 0.925 0.881 0.814 0.0
P37223585 NADP-dependent malic enzy N/A no 0.936 0.988 0.796 0.0
Q9LYG3588 NADP-dependent malic enzy no no 0.949 0.996 0.812 0.0
Q9CA83646 NADP-dependent malic enzy no no 0.918 0.877 0.811 0.0
>sp|P51615|MAOX_VITVI NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1 Back     alignment and function desciption
 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/592 (84%), Positives = 549/592 (92%), Gaps = 4/592 (0%)

Query: 29  MESTTNTMVNGS---DLDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDP 85
           MEST   + +G+   DLD   A  GGGV D+YGEDFATEDQL+TPWTVSVASGY+LLRDP
Sbjct: 1   MESTLKDIRDGASVLDLDPK-ATVGGGVEDLYGEDFATEDQLVTPWTVSVASGYSLLRDP 59

Query: 86  RHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERN 145
           RHNKGLAF + ERDAHYL GLLPP +  QELQE++LM+++RQY+VPLQ+Y+AMMDLQERN
Sbjct: 60  RHNKGLAFNDKERDAHYLCGLLPPVVSTQELQERKLMNSIRQYQVPLQKYMAMMDLQERN 119

Query: 146 ERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPE 205
           ERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPE
Sbjct: 120 ERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPE 179

Query: 206 RNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQL 265
           R IQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGG+RPSACLPITIDVGTNNE+L
Sbjct: 180 RRIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKL 239

Query: 266 LNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSS 325
           L +EFYIGL+Q+RATG+EY+E LQEFM+ VKQNYGEKVLIQFEDFANHNAF+LL+KY ++
Sbjct: 240 LANEFYIGLKQRRATGKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTT 299

Query: 326 HLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTK 385
           HL FNDDIQGTASVVLAGI+SAL+L+GGTLAD  FLFLGAGEAGTGIAELIALEMSKQTK
Sbjct: 300 HLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKQTK 359

Query: 386 APIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS 445
            PIEE RKKIWLVDSKGLIV SRK+SLQ FKKPWAHEH P+K LLDAVK IKPT+L+G+S
Sbjct: 360 CPIEETRKKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSS 419

Query: 446 GVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVE 505
           GVGK FTKEV+EAMAS NEKP+I ALSNPTSQSECTAEEAYTW++G+AIFASGSPFDPVE
Sbjct: 420 GVGKAFTKEVIEAMASCNEKPLILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDPVE 479

Query: 506 YNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYP 565
           YNGK FVPGQ NNAYIFPGLG+GL+ISGAIRV DEMLLAASEALA QVTQE+FDKGLIYP
Sbjct: 480 YNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYP 539

Query: 566 PFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 617
           PF+NIRKISAHIAA VAAKAY+LGLA+RLP+P++LV YAESCMYSP+YRSYR
Sbjct: 540 PFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591

Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 0
>sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1 Back     alignment and function description
>sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1 Back     alignment and function description
>sp|P43279|MAOC_ORYSJ NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2 Back     alignment and function description
>sp|P34105|MAOX_POPTR NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3 Back     alignment and function description
>sp|Q9XGZ0|MAOP3_ARATH NADP-dependent malic enzyme 3 OS=Arabidopsis thaliana GN=NADP-ME3 PE=1 SV=1 Back     alignment and function description
>sp|P22178|MAOC_FLATR NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1 Back     alignment and function description
>sp|P37223|MAOX_MESCR NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LYG3|MAOP2_ARATH NADP-dependent malic enzyme 2 OS=Arabidopsis thaliana GN=NADP-ME2 PE=1 SV=1 Back     alignment and function description
>sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic OS=Arabidopsis thaliana GN=NADP-ME4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
255550956588 malic enzyme, putative [Ricinus communis 0.949 0.996 0.886 0.0
356515635589 PREDICTED: NADP-dependent malic enzyme-l 0.954 1.0 0.877 0.0
359475960585 PREDICTED: NADP-dependent malic enzyme-l 0.940 0.991 0.881 0.0
296081563575 unnamed protein product [Vitis vinifera] 0.925 0.993 0.891 0.0
255546341591 malic enzyme, putative [Ricinus communis 0.952 0.994 0.834 0.0
356507937588 PREDICTED: NADP-dependent malic enzyme-l 0.951 0.998 0.879 0.0
225445108591 PREDICTED: NADP-dependent malic enzyme [ 0.952 0.994 0.844 0.0
1708924591 RecName: Full=NADP-dependent malic enzym 0.952 0.994 0.841 0.0
225442481640 PREDICTED: NADP-dependent malic enzyme [ 0.965 0.931 0.821 0.0
1561774640 malate dehydrogenase [Vitis vinifera] 0.965 0.931 0.821 0.0
>gi|255550956|ref|XP_002516526.1| malic enzyme, putative [Ricinus communis] gi|223544346|gb|EEF45867.1| malic enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1072 bits (2773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/591 (88%), Positives = 560/591 (94%), Gaps = 5/591 (0%)

Query: 29  MESTTNTMVNGSD--LDNNNAAGGGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPR 86
           MEST   M+NG D  L+  N A GGGV DVYGEDFATEDQLITPW  S+ASGYTLLRDPR
Sbjct: 1   MEST---MMNGGDSLLEKKNVAVGGGVEDVYGEDFATEDQLITPWAASIASGYTLLRDPR 57

Query: 87  HNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNE 146
           HNKGLAF E ERDAHYLRGLLPPA+++QE QEKRLMHNLRQY+VPLQRY+AMMDLQERNE
Sbjct: 58  HNKGLAFNEKERDAHYLRGLLPPAILSQEHQEKRLMHNLRQYQVPLQRYMAMMDLQERNE 117

Query: 147 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER 206
           RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER
Sbjct: 118 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPER 177

Query: 207 NIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLL 266
           NIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGG+RPSACLP+TIDVGTNNEQLL
Sbjct: 178 NIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEQLL 237

Query: 267 NDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSH 326
           NDEFYIGLRQ+RATGQEYAELL+EFMTA KQNYGEKVL+QFEDFANHNAFELL+KYSSSH
Sbjct: 238 NDEFYIGLRQRRATGQEYAELLEEFMTAAKQNYGEKVLVQFEDFANHNAFELLAKYSSSH 297

Query: 327 LVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKA 386
           LVFNDDIQGTASVVLAG+L+ALKLVGGTL++  FLFLGAGEAGTGIAELIA E+SKQTKA
Sbjct: 298 LVFNDDIQGTASVVLAGLLAALKLVGGTLSNHKFLFLGAGEAGTGIAELIAREISKQTKA 357

Query: 387 PIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG 446
           PIEE RKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH P+K LLDAVKA+KPT+L+G+SG
Sbjct: 358 PIEETRKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLDAVKALKPTVLIGSSG 417

Query: 447 VGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY 506
           VGKTFTKEVV+AMASFNEKP+I ALSNPTSQSECTAEEAYTWS+G+AI+ASGSPFDPVEY
Sbjct: 418 VGKTFTKEVVQAMASFNEKPLILALSNPTSQSECTAEEAYTWSEGRAIYASGSPFDPVEY 477

Query: 507 NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPP 566
           NGKVFV GQ NNAYIFPG GLGLI+SGAIRV ++MLLAASEALA QV QEHFDKGLIYPP
Sbjct: 478 NGKVFVSGQANNAYIFPGFGLGLIMSGAIRVHEDMLLAASEALAEQVKQEHFDKGLIYPP 537

Query: 567 FTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 617
           F+NIRKISAHIAAKVAAKAY+LGLASRLPRPKDLV +AESCMYSP+YRSYR
Sbjct: 538 FSNIRKISAHIAAKVAAKAYELGLASRLPRPKDLVQHAESCMYSPIYRSYR 588

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356515635|ref|XP_003526504.1| PREDICTED: NADP-dependent malic enzyme-like [Glycine max] Back     alignment and taxonomy information
>gi|359475960|ref|XP_003631773.1| PREDICTED: NADP-dependent malic enzyme-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296081563|emb|CBI20568.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255546341|ref|XP_002514230.1| malic enzyme, putative [Ricinus communis] gi|223546686|gb|EEF48184.1| malic enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507937|ref|XP_003522719.1| PREDICTED: NADP-dependent malic enzyme-like [Glycine max] Back     alignment and taxonomy information
>gi|225445108|ref|XP_002283751.1| PREDICTED: NADP-dependent malic enzyme [Vitis vinifera] gi|297738764|emb|CBI28009.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|1708924|sp|P51615.1|MAOX_VITVI RecName: Full=NADP-dependent malic enzyme; Short=NADP-ME gi|515759|gb|AAA67087.1| malate dehydrogenase (NADP+) [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442481|ref|XP_002283814.1| PREDICTED: NADP-dependent malic enzyme [Vitis vinifera] gi|297743201|emb|CBI36068.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|1561774|gb|AAB08874.1| malate dehydrogenase [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
TAIR|locus:2180547588 NADP-ME3 "NADP-malic enzyme 3" 0.949 0.996 0.755 8.9e-244
TAIR|locus:2181980588 NADP-ME2 "NADP-malic enzyme 2" 0.949 0.996 0.757 1.4e-243
TAIR|locus:2017854646 NADP-ME4 "NADP-malic enzyme 4" 0.909 0.868 0.762 1.4e-238
TAIR|locus:2052045581 NADP-ME1 "NADP-malic enzyme 1" 0.909 0.965 0.762 4.8e-236
UNIPROTKB|F1P0Y6576 ME1 "Malic enzyme" [Gallus gal 0.883 0.946 0.510 1.1e-149
RGD|3074572 Me1 "malic enzyme 1, NADP(+)-d 0.865 0.933 0.523 4.3e-148
UNIPROTKB|P13697572 Me1 "NADP-dependent malic enzy 0.865 0.933 0.523 4.3e-148
MGI|MGI:97043572 Me1 "malic enzyme 1, NADP(+)-d 0.865 0.933 0.519 3.1e-147
ZFIN|ZDB-GENE-040801-147581 me2 "malic enzyme 2, NAD(+)-de 0.883 0.938 0.496 3.1e-147
UNIPROTKB|P48163572 ME1 "NADP-dependent malic enzy 0.865 0.933 0.512 5.7e-146
TAIR|locus:2180547 NADP-ME3 "NADP-malic enzyme 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2349 (831.9 bits), Expect = 8.9e-244, P = 8.9e-244
 Identities = 443/586 (75%), Positives = 500/586 (85%)

Query:    32 TTNTMVNGSDLXXXXXXXXXXXXXXYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGL 91
             T  T ++   +              YGED AT DQL+TPW  SVASGYTL+RDPR+NKGL
Sbjct:     3 TNQTQISDEYVTGNSSGVGGGISDVYGEDSATLDQLVTPWVTSVASGYTLMRDPRYNKGL 62

Query:    92 AFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYK 151
             AFT+ ERDAHY+ GLLPP +++Q++QE+++MHNLRQY VPLQRY+A+MDLQERNERLFYK
Sbjct:    63 AFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQYTVPLQRYMALMDLQERNERLFYK 122

Query:   152 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVI 211
             LLIDNVEELLPVVYTPTVGEACQKYGSI+RRPQGLYISLKEKGKILEVLKNWP+R IQVI
Sbjct:   123 LLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKILEVLKNWPQRGIQVI 182

Query:   212 VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFY 271
             VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGG+RPSACLPITIDVGTNNE+LLN+EFY
Sbjct:   183 VVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEKLLNNEFY 242

Query:   272 IGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFND 331
             IGL+QKRA G+EYAE LQEFM AVKQNYGEKVL+QFEDFANH+AFELLSKY SSHLVFND
Sbjct:   243 IGLKQKRANGEEYAEFLQEFMCAVKQNYGEKVLVQFEDFANHHAFELLSKYCSSHLVFND 302

Query:   332 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEA 391
             DIQGTASVVLAG+++A K++G +LAD TFLFLGAGEAGTGIAELIAL++SK+T  PI+E 
Sbjct:   303 DIQGTASVVLAGLIAAQKVLGKSLADHTFLFLGAGEAGTGIAELIALKISKETGKPIDET 362

Query:   392 RKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTF 451
             RKKIWLVDSKGLIVS RKESLQHFK+PWAH+H P+K LL AV AIKPT+L+GTSGVGKTF
Sbjct:   363 RKKIWLVDSKGLIVSERKESLQHFKQPWAHDHKPVKELLAAVNAIKPTVLIGTSGVGKTF 422

Query:   452 TKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVF 511
             TKEVVEAMA+ NEKP+I ALSNPTSQ+ECTAEEAYTW+KG+AIFASGSPFDPV+Y+GK F
Sbjct:   423 TKEVVEAMATLNEKPLILALSNPTSQAECTAEEAYTWTKGRAIFASGSPFDPVQYDGKKF 482

Query:   512 VPGQGNNAYIFPXXXXXXIISGAIRVRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIR 571
              PGQ NN YIFP      I+SGAIRVRD+M          QVT+E+F  GLIYPPF NIR
Sbjct:   483 TPGQANNCYIFPGLGLGLIMSGAIRVRDDMLLAASEALASQVTEENFANGLIYPPFANIR 542

Query:   572 XXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 617
                           Y+LGLAS LPRPKDLV  AESCMYSP+YR++R
Sbjct:   543 KISANIAASVGAKTYELGLASNLPRPKDLVKMAESCMYSPVYRNFR 588
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004470 "malic enzyme activity" evidence=IEA;ISS
GO:0006108 "malate metabolic process" evidence=IEA;ISS;IDA
GO:0009507 "chloroplast" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA
GO:0016619 "malate dehydrogenase (oxaloacetate-decarboxylating) activity" evidence=IEA
GO:0016652 "oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor" evidence=ISS
GO:0046872 "metal ion binding" evidence=IEA
GO:0051287 "NAD binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0004473 "malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity" evidence=IDA
GO:0051260 "protein homooligomerization" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
TAIR|locus:2181980 NADP-ME2 "NADP-malic enzyme 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017854 NADP-ME4 "NADP-malic enzyme 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052045 NADP-ME1 "NADP-malic enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0Y6 ME1 "Malic enzyme" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|3074 Me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P13697 Me1 "NADP-dependent malic enzyme" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:97043 Me1 "malic enzyme 1, NADP(+)-dependent, cytosolic" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-147 me2 "malic enzyme 2, NAD(+)-dependent, mitochondrial" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P48163 ME1 "NADP-dependent malic enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B4ESY2MAO1_PROMH1, ., 1, ., 1, ., 3, 80.45090.87030.9504yesno
A4SKE9MAO1_AERS41, ., 1, ., 1, ., 3, 80.44920.86540.9468yesno
O82191MAOP1_ARATH1, ., 1, ., 1, ., 4, 00.78940.94161.0nono
P06801MAOX_MOUSE1, ., 1, ., 1, ., 4, 00.53810.86540.9335yesno
P28227MAOX_ANAPL1, ., 1, ., 1, ., 4, 00.54250.87030.9640N/Ano
P13697MAOX_RAT1, ., 1, ., 1, ., 4, 00.54180.86540.9335yesno
Q29558MAOX_PIG1, ., 1, ., 1, ., 4, 00.53070.86540.9587yesno
B7LQX1MAO1_ESCF31, ., 1, ., 1, ., 3, 80.42540.87030.9504yesno
B5RAB4MAO1_SALG21, ., 1, ., 1, ., 3, 80.42410.86380.9433yesno
P34105MAOX_POPTR1, ., 1, ., 1, ., 4, 00.81750.95290.9949nono
Q9XGZ0MAOP3_ARATH1, ., 1, ., 1, ., 4, 00.80880.94970.9965yesno
Q086X9MAO1_SHEFN1, ., 1, ., 1, ., 3, 80.43730.86870.9537yesno
Q9LYG3MAOP2_ARATH1, ., 1, ., 1, ., 4, 00.81220.94970.9965nono
P22178MAOC_FLATR1, ., 1, ., 1, ., 4, 00.81460.92540.8811N/Ano
P43279MAOC_ORYSJ1, ., 1, ., 1, ., 4, 00.83010.91730.8857nono
A7MN74MAO1_CROS81, ., 1, ., 1, ., 3, 80.44040.86540.9434yesno
Q4FRX3MAO1_PSYA21, ., 1, ., 1, ., 3, 80.44720.86870.9571yesno
B5FEY5MAO1_VIBFM1, ., 1, ., 1, ., 3, 80.43270.87030.9555yesno
Q2NUD3MAO1_SODGM1, ., 1, ., 1, ., 3, 80.44200.86700.9469yesno
Q1QC40MAO1_PSYCK1, ., 1, ., 1, ., 3, 80.44720.86870.9571yesno
A0KHR8MAO1_AERHH1, ., 1, ., 1, ., 3, 80.44560.86540.9468yesno
Q83ML6MAO1_SHIFL1, ., 1, ., 1, ., 3, 80.42540.87030.9504yesno
P37222MAOC_SOLLC1, ., 1, ., 1, ., 4, 00.79710.91570.9860N/Ano
P37223MAOX_MESCR1, ., 1, ., 1, ., 4, 00.79620.93670.9880N/Ano
P51615MAOX_VITVI1, ., 1, ., 1, ., 4, 00.84120.95290.9949nono
P40927MAOX_COLLI1, ., 1, ., 1, ., 4, 00.53140.87030.9640N/Ano
A8AGN6MAO1_CITK81, ., 1, ., 1, ., 3, 80.42960.86380.9433yesno
Q6TU48MAOX_DICDI1, ., 1, ., 1, ., 4, 00.48030.85890.9742yesno
Q9CA83MAOP4_ARATH1, ., 1, ., 1, ., 4, 00.81120.91890.8777nono
Q0T457MAO1_SHIF81, ., 1, ., 1, ., 3, 80.42540.87030.9504yesno
P48163MAOX_HUMAN1, ., 1, ., 1, ., 4, 00.53250.86540.9335yesno
B1LFD8MAO1_ECOSM1, ., 1, ., 1, ., 3, 80.42540.87030.9504yesno
P12628MAOX_PHAVU1, ., 1, ., 1, ., 4, 00.85540.95130.9966N/Ano
C6DDS6MAO1_PECCP1, ., 1, ., 1, ., 3, 80.44720.87030.9504yesno
P16243MAOC_MAIZE1, ., 1, ., 1, ., 4, 00.80900.89140.8647N/Ano
Q6FFL8MAO1_ACIAD1, ., 1, ., 1, ., 3, 80.44920.86700.9452yesno
Q57P88MAO1_SALCH1, ., 1, ., 1, ., 3, 80.42590.86380.9433yesno
P27443MAOM_ASCSU1, ., 1, ., 1, ., 3, 80.50180.85890.8242N/Ano
C5BCM3MAO1_EDWI91, ., 1, ., 1, ., 3, 80.45000.86870.9486yesno
Q5E4J3MAO1_VIBF11, ., 1, ., 1, ., 3, 80.43270.87030.9555yesno
P36444MAOC_FLAPR1, ., 1, ., 1, ., 4, 00.80190.97080.9258N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.1.10.998
4th Layer1.1.1.400.994

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
BRADI2G33450.1
annotation not avaliable (570 aa)
(Brachypodium distachyon)
Predicted Functional Partners:
BRADI3G15560.1
annotation not avaliable (354 aa)
   • •• 0.494
BRADI2G25740.1
annotation not avaliable (938 aa)
     •• 0.484
BRADI3G08910.1
annotation not avaliable (506 aa)
     •• 0.460
BRADI1G67730.1
annotation not avaliable (671 aa)
     •• 0.434

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
PLN03129581 PLN03129, PLN03129, NADP-dependent malic enzyme; P 0.0
PRK13529563 PRK13529, PRK13529, malate dehydrogenase; Provisio 0.0
PTZ00317559 PTZ00317, PTZ00317, NADP-dependent malic enzyme; P 0.0
cd05312279 cd05312, NAD_bind_1_malic_enz, NAD(P) binding doma 1e-158
pfam03949255 pfam03949, Malic_M, Malic enzyme, NAD binding doma 1e-131
COG0281432 COG0281, SfcA, Malic enzyme [Energy production and 1e-118
pfam00390182 pfam00390, malic, Malic enzyme, N-terminal domain 1e-104
smart00919231 smart00919, Malic_M, Malic enzyme, NAD binding dom 1e-101
cd00762254 cd00762, NAD_bind_malic_enz, NAD(P) binding domain 2e-91
cd05311226 cd05311, NAD_bind_2_malic_enz, NAD(P) binding doma 3e-33
PRK12862 763 PRK12862, PRK12862, malic enzyme; Reviewed 2e-24
PRK07232 752 PRK07232, PRK07232, bifunctional malic enzyme oxid 1e-21
PRK12861 764 PRK12861, PRK12861, malic enzyme; Reviewed 7e-19
cd0519186 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding do 7e-09
>gnl|CDD|215594 PLN03129, PLN03129, NADP-dependent malic enzyme; Provisional Back     alignment and domain information 
 Score = 1146 bits (2968), Expect = 0.0
 Identities = 429/568 (75%), Positives = 492/568 (86%), Gaps = 1/568 (0%)

Query: 50  GGGVVDVYGEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPP 109
            GGV DVYGED ATE+Q +TPW   VASGY LLRDPR+NKGLAFTE ERD   LRGLLPP
Sbjct: 15  AGGVEDVYGEDAATEEQPVTPWVR-VASGYDLLRDPRYNKGLAFTETERDRLGLRGLLPP 73

Query: 110 ALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTV 169
           A+++QELQ KR M NLR  + PL +Y A+MDLQERNERLFY++LIDN+EELLP+VYTPTV
Sbjct: 74  AVLSQELQVKRFMENLRALESPLAKYRALMDLQERNERLFYRVLIDNIEELLPIVYTPTV 133

Query: 170 GEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQG 229
           GEACQKYGS+FRRP+GLYISLK+KG++L +LKNWPER++QVIVVTDGERILGLGDLG QG
Sbjct: 134 GEACQKYGSLFRRPRGLYISLKDKGRVLSMLKNWPERDVQVIVVTDGERILGLGDLGVQG 193

Query: 230 MGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQ 289
           MGIPVGKL LYTA GG+RPSA LP+ IDVGTNNE+LLND FYIGLRQ R TG+EY EL+ 
Sbjct: 194 MGIPVGKLDLYTAAGGIRPSAVLPVCIDVGTNNEKLLNDPFYIGLRQPRLTGEEYDELVD 253

Query: 290 EFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALK 349
           EFM AVKQ +G KVL+QFEDFAN NAF LL +Y ++HL FNDDIQGTA+V LAG+L+AL+
Sbjct: 254 EFMEAVKQRWGPKVLVQFEDFANKNAFRLLQRYRTTHLCFNDDIQGTAAVALAGLLAALR 313

Query: 350 LVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK 409
             GG LADQ  LF GAGEAGTGIAELIAL MS+QT    EEARK+IWLVDSKGL+  SRK
Sbjct: 314 ATGGDLADQRILFAGAGEAGTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRK 373

Query: 410 ESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469
           +SLQ FKKP+AH+H P  SLL+AVKAIKPT+L+G SGVG TFTKEV+EAMAS NE+P+IF
Sbjct: 374 DSLQPFKKPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIF 433

Query: 470 ALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGL 529
           ALSNPTS++ECTAEEAYTW+ G+AIFASGSPFDPVEYNGK F PGQ NNAYIFPG+GLG 
Sbjct: 434 ALSNPTSKAECTAEEAYTWTGGRAIFASGSPFDPVEYNGKTFHPGQANNAYIFPGIGLGA 493

Query: 530 IISGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLG 589
           ++SGAIRV D+MLLAA+EALAAQVT+E   KG IYPPF+ IR ISAH+AA VAAKAY+ G
Sbjct: 494 LLSGAIRVTDDMLLAAAEALAAQVTEEELAKGAIYPPFSRIRDISAHVAAAVAAKAYEEG 553

Query: 590 LASRLPRPKDLVSYAESCMYSPMYRSYR 617
           LA+RLPRP+DLV YAESCMYSP+YR YR
Sbjct: 554 LATRLPRPEDLVEYAESCMYSPVYRPYR 581

Length = 581
>gnl|CDD|237414 PRK13529, PRK13529, malate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|240357 PTZ00317, PTZ00317, NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>gnl|CDD|133454 cd05312, NAD_bind_1_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>gnl|CDD|217809 pfam03949, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|223358 COG0281, SfcA, Malic enzyme [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215894 pfam00390, malic, Malic enzyme, N-terminal domain Back     alignment and domain information
>gnl|CDD|214912 smart00919, Malic_M, Malic enzyme, NAD binding domain Back     alignment and domain information
>gnl|CDD|133442 cd00762, NAD_bind_malic_enz, NAD(P) binding domain of malic enzyme Back     alignment and domain information
>gnl|CDD|133453 cd05311, NAD_bind_2_malic_enz, NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>gnl|CDD|183799 PRK12862, PRK12862, malic enzyme; Reviewed Back     alignment and domain information
>gnl|CDD|235976 PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information
>gnl|CDD|183798 PRK12861, PRK12861, malic enzyme; Reviewed Back     alignment and domain information
>gnl|CDD|133449 cd05191, NAD_bind_amino_acid_DH, NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 617
KOG1257582 consensus NADP+-dependent malic enzyme [Energy pro 100.0
PRK13529563 malate dehydrogenase; Provisional 100.0
PLN03129581 NADP-dependent malic enzyme; Provisional 100.0
PTZ00317559 NADP-dependent malic enzyme; Provisional 100.0
COG0281432 SfcA Malic enzyme [Energy production and conversio 100.0
PRK12861 764 malic enzyme; Reviewed 100.0
PRK12862 763 malic enzyme; Reviewed 100.0
PRK07232 752 bifunctional malic enzyme oxidoreductase/phosphotr 100.0
cd05312279 NAD_bind_1_malic_enz NAD(P) binding domain of mali 100.0
PF03949255 Malic_M: Malic enzyme, NAD binding domain; InterPr 100.0
cd00762254 NAD_bind_malic_enz NAD(P) binding domain of malic 100.0
PF00390182 malic: Malic enzyme, N-terminal domain; InterPro: 100.0
cd05311226 NAD_bind_2_malic_enz NAD(P) binding domain of mali 100.0
cd0519186 NAD_bind_amino_acid_DH NAD(P) binding domain of am 98.86
PRK05476425 S-adenosyl-L-homocysteine hydrolase; Provisional 97.65
TIGR01035417 hemA glutamyl-tRNA reductase. This enzyme, togethe 97.21
PRK09414445 glutamate dehydrogenase; Provisional 97.05
PLN02477410 glutamate dehydrogenase 97.04
cd05213311 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain 96.95
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 96.91
cd05211217 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of 96.88
PRK00045423 hemA glutamyl-tRNA reductase; Reviewed 96.86
TIGR00936406 ahcY adenosylhomocysteinase. This enzyme hydrolyze 96.85
PRK14031444 glutamate dehydrogenase; Provisional 96.76
PRK14982340 acyl-ACP reductase; Provisional 96.73
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 96.66
PLN02494477 adenosylhomocysteinase 96.65
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 96.57
TIGR02853287 spore_dpaA dipicolinic acid synthetase, A subunit. 96.55
PTZ00079454 NADP-specific glutamate dehydrogenase; Provisional 96.53
PRK14030445 glutamate dehydrogenase; Provisional 96.38
PLN00203519 glutamyl-tRNA reductase 96.18
COG0373414 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] 96.13
PRK08306296 dipicolinate synthase subunit A; Reviewed 96.06
PRK14192283 bifunctional 5,10-methylene-tetrahydrofolate dehyd 95.9
PTZ00075476 Adenosylhomocysteinase; Provisional 95.85
cd01076227 NAD_bind_1_Glu_DH NAD(P) binding domain of glutama 95.73
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 95.65
PRK13940414 glutamyl-tRNA reductase; Provisional 95.61
cd05313254 NAD_bind_2_Glu_DH NAD(P) binding domain of glutama 95.55
PRK14175286 bifunctional 5,10-methylene-tetrahydrofolate dehyd 95.53
PRK12549284 shikimate 5-dehydrogenase; Reviewed 95.47
cd01075200 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l 95.43
cd01078194 NAD_bind_H4MPT_DH NADP binding domain of methylene 95.4
PLN00106323 malate dehydrogenase 95.36
cd01065155 NAD_bind_Shikimate_DH NAD(P) binding domain of Shi 95.19
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 94.52
PRK00676338 hemA glutamyl-tRNA reductase; Validated 94.49
TIGR01809282 Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO 94.45
PF00670162 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase 94.2
PF0380796 F420_oxidored: NADP oxidoreductase coenzyme F420-d 94.06
PRK10792285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.76
PF00208244 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Val 93.62
cd05212140 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom 93.38
cd05296 419 GH4_P_beta_glucosidase Glycoside Hydrolases Family 93.19
PRK05086312 malate dehydrogenase; Provisional 93.11
PRK08328231 hypothetical protein; Provisional 93.06
PRK14191285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 93.05
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 93.01
cd00650263 LDH_MDH_like NAD-dependent, lactate dehydrogenase- 92.87
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 92.83
PRK08605332 D-lactate dehydrogenase; Validated 92.8
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 92.77
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 92.52
PF00056141 Ldh_1_N: lactate/malate dehydrogenase, NAD binding 92.43
PRK12749288 quinate/shikimate dehydrogenase; Reviewed 92.19
cd05291306 HicDH_like L-2-hydroxyisocapronate dehydrogenases 92.13
PRK07531 495 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe 91.77
PLN02928347 oxidoreductase family protein 91.6
PRK08223287 hypothetical protein; Validated 91.6
PTZ00325321 malate dehydrogenase; Provisional 91.48
PRK05600370 thiamine biosynthesis protein ThiF; Validated 91.43
PRK12548289 shikimate 5-dehydrogenase; Provisional 91.42
PRK14027283 quinate/shikimate dehydrogenase; Provisional 91.37
PRK00257381 erythronate-4-phosphate dehydrogenase; Validated 91.25
PRK00066315 ldh L-lactate dehydrogenase; Reviewed 91.17
PTZ00082321 L-lactate dehydrogenase; Provisional 91.17
COG0578 532 GlpA Glycerol-3-phosphate dehydrogenase [Energy pr 91.15
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 91.06
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 90.99
cd01079197 NAD_bind_m-THF_DH NAD binding domain of methylene- 90.99
PRK15076 431 alpha-galactosidase; Provisional 90.9
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 90.55
PTZ00117319 malate dehydrogenase; Provisional 90.51
PRK14189285 bifunctional 5,10-methylene-tetrahydrofolate dehyd 90.46
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 90.46
PRK08762376 molybdopterin biosynthesis protein MoeB; Validated 90.44
PRK14194301 bifunctional 5,10-methylene-tetrahydrofolate dehyd 90.43
PRK00258278 aroE shikimate 5-dehydrogenase; Reviewed 90.27
cd05297 423 GH4_alpha_glucosidase_galactosidase Glycoside Hydr 90.26
PRK15438378 erythronate-4-phosphate dehydrogenase PdxB; Provis 89.94
PRK14176287 bifunctional 5,10-methylene-tetrahydrofolate dehyd 89.84
PRK14178279 bifunctional 5,10-methylene-tetrahydrofolate dehyd 89.81
cd05197 425 GH4_glycoside_hydrolases Glycoside Hydrases Family 89.79
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 89.77
COG0169283 AroE Shikimate 5-dehydrogenase [Amino acid transpo 89.33
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 89.21
PRK06223307 malate dehydrogenase; Reviewed 89.21
cd00704323 MDH Malate dehydrogenase. Malate dehydrogenase (MD 89.03
PRK04346397 tryptophan synthase subunit beta; Validated 88.98
TIGR02992326 ectoine_eutC ectoine utilization protein EutC. Mem 88.86
PF02826178 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy 88.61
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 88.46
cd00755231 YgdL_like Family of activating enzymes (E1) of ubi 88.43
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 88.16
TIGR00561511 pntA NAD(P) transhydrogenase, alpha subunit. In so 87.51
cd05298 437 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; 87.36
PRK14851 679 hypothetical protein; Provisional 87.33
PF02056183 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP 87.16
cd01336325 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli 86.92
PRK14184286 bifunctional 5,10-methylene-tetrahydrofolate dehyd 86.63
TIGR01763305 MalateDH_bact malate dehydrogenase, NAD-dependent. 86.61
COG0111324 SerA Phosphoglycerate dehydrogenase and related de 86.51
PRK14183281 bifunctional 5,10-methylene-tetrahydrofolate dehyd 86.46
TIGR01915219 npdG NADPH-dependent F420 reductase. This model re 86.27
PRK08374336 homoserine dehydrogenase; Provisional 86.27
PRK14190284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 86.25
COG0334411 GdhA Glutamate dehydrogenase/leucine dehydrogenase 86.04
PRK07634245 pyrroline-5-carboxylate reductase; Reviewed 85.97
cd01337310 MDH_glyoxysomal_mitochondrial Glyoxysomal and mito 85.93
TIGR01758324 MDH_euk_cyt malate dehydrogenase, NAD-dependent. T 85.92
PRK14179284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 85.89
PRK12550272 shikimate 5-dehydrogenase; Reviewed 85.81
TIGR00872298 gnd_rel 6-phosphogluconate dehydrogenase (decarbox 85.71
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 85.13
PLN02306386 hydroxypyruvate reductase 85.07
PRK14174295 bifunctional 5,10-methylene-tetrahydrofolate dehyd 85.06
PRK11880267 pyrroline-5-carboxylate reductase; Reviewed 85.01
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 84.78
PRK14106 450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 84.64
PRK14177284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 84.64
PF02882160 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl 84.55
TIGR01772312 MDH_euk_gproteo malate dehydrogenase, NAD-dependen 84.13
PRK14188296 bifunctional 5,10-methylene-tetrahydrofolate dehyd 83.87
cd00757228 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 83.84
PRK01710 458 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 83.78
PRK14172278 bifunctional 5,10-methylene-tetrahydrofolate dehyd 83.74
PRK13243333 glyoxylate reductase; Reviewed 83.68
PRK08291330 ectoine utilization protein EutC; Validated 83.36
cd01339300 LDH-like_MDH L-lactate dehydrogenase-like malate d 83.24
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 83.01
cd01338322 MDH_choloroplast_like Chloroplast-like malate dehy 82.56
TIGR02279 503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 82.5
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 82.46
PLN02516299 methylenetetrahydrofolate dehydrogenase (NADP+) 81.93
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 81.93
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 81.9
PRK14171288 bifunctional 5,10-methylene-tetrahydrofolate dehyd 81.81
TIGR01759323 MalateDH-SF1 malate dehydrogenase. This model repr 81.62
PRK15116268 sulfur acceptor protein CsdL; Provisional 81.42
PRK12921305 2-dehydropantoate 2-reductase; Provisional 81.38
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 81.35
PRK07878 392 molybdopterin biosynthesis-like protein MoeZ; Vali 81.27
PRK10886196 DnaA initiator-associating protein DiaA; Provision 81.18
cd01485198 E1-1_like Ubiquitin activating enzyme (E1), repeat 81.17
PRK06436303 glycerate dehydrogenase; Provisional 80.97
TIGR00507270 aroE shikimate 5-dehydrogenase. This model finds p 80.75
PRK07574385 formate dehydrogenase; Provisional 80.52
TIGR01408 1008 Ube1 ubiquitin-activating enzyme E1. This model re 80.51
PRK12480330 D-lactate dehydrogenase; Provisional 80.41
PRK14193284 bifunctional 5,10-methylene-tetrahydrofolate dehyd 80.4
cd05290307 LDH_3 A subgroup of L-lactate dehydrogenases. L-la 80.4
PRK14187294 bifunctional 5,10-methylene-tetrahydrofolate dehyd 80.31
PRK05690245 molybdopterin biosynthesis protein MoeB; Provision 80.31
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 80.06
PRK14166282 bifunctional 5,10-methylene-tetrahydrofolate dehyd 80.06
>KOG1257 consensus NADP+-dependent malic enzyme [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.6e-225  Score=1780.35  Aligned_cols=561  Identities=65%  Similarity=1.065  Sum_probs=547.7

Q ss_pred             cccCCcccccccccccc-ccccccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchh
Q 007112           55 DVYGEDFATEDQLITPW-TVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQ  133 (617)
Q Consensus        55 ~~~~~~~~~~~~~~~~~-~~~~~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~  133 (617)
                      ..++++..+..+...+| ..++.+|+++|+||++|||+|||.+|||+|||||||||.|+|+|+|++||+.+|+++++||+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ll~~p~~NKglAFTl~ERq~l~i~GLLPp~v~t~d~Q~~r~~~~l~~~~~~l~   86 (582)
T KOG1257|consen    7 EVYSTAPLTLAHRITPRPVESKKRGYDLLRDPRYNKGLAFTLEERQRLGIHGLLPPVVRTQDEQALRCMNNLRSLTSPLA   86 (582)
T ss_pred             ccccCCCccccccccccccccccCChhhccCCCcccccccCHHHHHhhCccccCCccccCHHHHHHHHHHHHHhccchHH
Confidence            34444444444444555 66788999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhhhhhhHHHhhcCccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEE
Q 007112          134 RYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVV  213 (617)
Q Consensus       134 Ky~~L~~L~~rNe~LFY~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVV  213 (617)
                      ||+||++||+|||+||||+|++|+||+||||||||||+|||+||+|||+|+|||||++|+|||.++|+|||.++|++|||
T Consensus        87 ky~~L~~L~~rNerLfY~~l~~nie~~~PIvYTPTvG~acq~y~~i~r~p~Glfisi~D~Ghi~~~l~nWp~~~V~~IvV  166 (582)
T KOG1257|consen   87 KYIYLMDLQDRNERLFYRLLIDNIEELLPIVYTPTVGLACQQYGLIFRRPQGLFISIKDKGHIKQVLKNWPERNVKAIVV  166 (582)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhhHHHhCCeeecCcHHHHHHHhhhhhccCceeEEEecccchHHHHHHhCCccceeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCceeecCCCCCCCcccchhhhHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHH
Q 007112          214 TDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMT  293 (617)
Q Consensus       214 TDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~  293 (617)
                      |||||||||||||++|||||+|||+||||||||+|++|||||||||||||+||+||||+|+||+|++|++||+|+||||+
T Consensus       167 TDGerILGLGDlG~~GmgIpvgKL~Lyta~~GI~P~~cLPV~LDVGTNNe~Ll~DplYiGLr~~R~~g~eYd~~~dEFm~  246 (582)
T KOG1257|consen  167 TDGERILGLGDLGVNGMGIPVGKLALYTALGGIRPSRCLPVCLDVGTNNEKLLNDPLYIGLRQRRVRGKEYDEFLDEFME  246 (582)
T ss_pred             eCCCceecccccccCcccceecHHHHHHHhcCCChhhceeEEEeccCChHHHhcCccccccccccccccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCeeeeeecCCCCcHHHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHH
Q 007112          294 AVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIA  373 (617)
Q Consensus       294 av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA  373 (617)
                      ||+++|||++|||||||+++|||++|+|||++||||||||||||+|+|||||+|+|++|++|+||+|||+|||+||+|||
T Consensus       247 Av~~~yG~~~lIqFEDF~~~nAfrlL~kYr~~~c~FNDDIQGTaaValAgllaa~rit~~~lsd~~ilf~GAG~A~~GIA  326 (582)
T KOG1257|consen  247 AVVQRYGPNTLIQFEDFANHNAFRLLEKYRNKYCMFNDDIQGTAAVALAGLLAALRITGKPLSDHVILFLGAGEAALGIA  326 (582)
T ss_pred             HHHHHhCcceEEEehhccchhHHHHHHHhccccceecccccchhHHHHHHHHHHHHHhCCccccceEEEecCchHHhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCH
Q 007112          374 ELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTK  453 (617)
Q Consensus       374 ~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fte  453 (617)
                      +||+.+|+++ |+|+|||++||||+|++|||+++|+.+++++|++|||+++++++|+|||+.||||||||+|++||+|||
T Consensus       327 ~l~v~~m~~~-Gl~~eeA~kkIwlvD~~GLi~~~r~~~l~~~~~~fAk~~~~~~~L~e~V~~vKPtvLiG~S~~~g~Fte  405 (582)
T KOG1257|consen  327 NLIVMAMVKE-GLSEEEARKKIWLVDSKGLITKGRKASLTEEKKPFAKDHEEIKDLEEAVKEVKPTVLIGASGVGGAFTE  405 (582)
T ss_pred             HHHHHHHHHc-CCCHHHHhccEEEEecCceeeccccCCCChhhccccccChHHHHHHHHHHhcCCcEEEecccCCccCCH
Confidence            9999999996 999999999999999999999999878999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhC
Q 007112          454 EVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISG  533 (617)
Q Consensus       454 evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~  533 (617)
                      ||||+|+++|||||||||||||+++||||||||+||+||||||||||||||+|+||+|+||||||+|+|||||||+++|+
T Consensus       406 evl~~Ma~~~erPiIFalSNPT~~aECtae~ay~~t~Gr~ifaSGSPF~pV~~~gK~~~pgQ~NN~yiFPGi~Lg~vlsg  485 (582)
T KOG1257|consen  406 EVLRAMAKSNERPIIFALSNPTSKAECTAEQAYKWTKGRAIFASGSPFPPVEYNGKVYVPGQGNNAYIFPGIGLGVVLSG  485 (582)
T ss_pred             HHHHHHHhcCCCceEEecCCCccccccCHHHHhhhcCCcEEEecCCCCCCceeCCcEecccCCceeEecchHHHHHHHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccCHHHHHHHHHHHHhccCcccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCC
Q 007112          534 AIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMY  613 (617)
Q Consensus       534 a~~Itd~M~laAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y  613 (617)
                      +++|||+||++||++||++++++++++|.||||+++||+||.+||++|+++||++|+|+..|+|+|+.+|++++||+|+|
T Consensus       486 ~~~i~D~mfl~Aae~LA~~v~~e~~~~g~lyPpl~~ir~iS~~Ia~aV~~~a~~~glA~~~p~P~d~~~~~~~~~y~~~Y  565 (582)
T KOG1257|consen  486 ARRIPDEMFLAAAEALAEQVSEEELEKGRLYPPLSNIREISANIAAAVLKYAYEEGLATRYPEPKDKEKFIEESMYNPEY  565 (582)
T ss_pred             CccCCHHHHHHHHHHHHhhCCHhHhhcCCcCCChhHHHHHHHHHHHHHHHHHHhcCccccCCCcccHHHHHHhccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC
Q 007112          614 RSY  616 (617)
Q Consensus       614 ~~~  616 (617)
                      +++
T Consensus       566 ~~~  568 (582)
T KOG1257|consen  566 RNS  568 (582)
T ss_pred             ccc
Confidence            985

>PRK13529 malate dehydrogenase; Provisional Back     alignment and domain information
>PLN03129 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>PTZ00317 NADP-dependent malic enzyme; Provisional Back     alignment and domain information
>COG0281 SfcA Malic enzyme [Energy production and conversion] Back     alignment and domain information
>PRK12861 malic enzyme; Reviewed Back     alignment and domain information
>PRK12862 malic enzyme; Reviewed Back     alignment and domain information
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed Back     alignment and domain information
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 Back     alignment and domain information
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme Back     alignment and domain information
>PF00390 malic: Malic enzyme, N-terminal domain; InterPro: IPR012301 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e Back     alignment and domain information
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 Back     alignment and domain information
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins Back     alignment and domain information
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Back     alignment and domain information
>TIGR01035 hemA glutamyl-tRNA reductase Back     alignment and domain information
>PRK09414 glutamate dehydrogenase; Provisional Back     alignment and domain information
>PLN02477 glutamate dehydrogenase Back     alignment and domain information
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed Back     alignment and domain information
>TIGR00936 ahcY adenosylhomocysteinase Back     alignment and domain information
>PRK14031 glutamate dehydrogenase; Provisional Back     alignment and domain information
>PRK14982 acyl-ACP reductase; Provisional Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PLN02494 adenosylhomocysteinase Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit Back     alignment and domain information
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional Back     alignment and domain information
>PRK14030 glutamate dehydrogenase; Provisional Back     alignment and domain information
>PLN00203 glutamyl-tRNA reductase Back     alignment and domain information
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PTZ00075 Adenosylhomocysteinase; Provisional Back     alignment and domain information
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK13940 glutamyl-tRNA reductase; Provisional Back     alignment and domain information
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 Back     alignment and domain information
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK12549 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase Back     alignment and domain information
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase Back     alignment and domain information
>PLN00106 malate dehydrogenase Back     alignment and domain information
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK00676 hemA glutamyl-tRNA reductase; Validated Back     alignment and domain information
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type Back     alignment and domain information
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 Back     alignment and domain information
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain Back     alignment and domain information
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF00208 ELFV_dehydrog: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; InterPro: IPR006096 Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related Back     alignment and domain information
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase Back     alignment and domain information
>PRK05086 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK08328 hypothetical protein; Provisional Back     alignment and domain information
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>PRK08605 D-lactate dehydrogenase; Validated Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] Back     alignment and domain information
>PRK12749 quinate/shikimate dehydrogenase; Reviewed Back     alignment and domain information
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases Back     alignment and domain information
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Back     alignment and domain information
>PLN02928 oxidoreductase family protein Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>PTZ00325 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK05600 thiamine biosynthesis protein ThiF; Validated Back     alignment and domain information
>PRK12548 shikimate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK14027 quinate/shikimate dehydrogenase; Provisional Back     alignment and domain information
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK00066 ldh L-lactate dehydrogenase; Reviewed Back     alignment and domain information
>PTZ00082 L-lactate dehydrogenase; Provisional Back     alignment and domain information
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase Back     alignment and domain information
>PRK15076 alpha-galactosidase; Provisional Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PTZ00117 malate dehydrogenase; Provisional Back     alignment and domain information
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated Back     alignment and domain information
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases Back     alignment and domain information
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional Back     alignment and domain information
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4 Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>PRK06223 malate dehydrogenase; Reviewed Back     alignment and domain information
>cd00704 MDH Malate dehydrogenase Back     alignment and domain information
>PRK04346 tryptophan synthase subunit beta; Validated Back     alignment and domain information
>TIGR02992 ectoine_eutC ectoine utilization protein EutC Back     alignment and domain information
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit Back     alignment and domain information
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases Back     alignment and domain information
>PRK14851 hypothetical protein; Provisional Back     alignment and domain information
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases Back     alignment and domain information
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent Back     alignment and domain information
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR01915 npdG NADPH-dependent F420 reductase Back     alignment and domain information
>PRK08374 homoserine dehydrogenase; Provisional Back     alignment and domain information
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases Back     alignment and domain information
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent Back     alignment and domain information
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK12550 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>PLN02306 hydroxypyruvate reductase Back     alignment and domain information
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) Back     alignment and domain information
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent Back     alignment and domain information
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA Back     alignment and domain information
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK13243 glyoxylate reductase; Reviewed Back     alignment and domain information
>PRK08291 ectoine utilization protein EutC; Validated Back     alignment and domain information
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>TIGR01759 MalateDH-SF1 malate dehydrogenase Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated Back     alignment and domain information
>PRK10886 DnaA initiator-associating protein DiaA; Provisional Back     alignment and domain information
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like Back     alignment and domain information
>PRK06436 glycerate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00507 aroE shikimate 5-dehydrogenase Back     alignment and domain information
>PRK07574 formate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01408 Ube1 ubiquitin-activating enzyme E1 Back     alignment and domain information
>PRK12480 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
2aw5_A575 Crystal Structure Of A Human Malic Enzyme Length = 1e-163
1gq2_A555 Malic Enzyme From Pigeon Liver Length = 555 1e-157
1gz3_A554 Molecular Mechanism For The Regulation Of Human Mit 1e-152
1llq_A605 Crystal Structure Of Malic Enzyme From Ascaris Suum 1e-147
1qr6_A584 Human Mitochondrial Nad(P)-Dependent Malic Enzyme L 1e-147
1efk_A584 Structure Of Human Malic Enzyme In Complex With Ket 1e-147
1do8_A564 Crystal Structure Of A Closed Form Of Human Mitocho 1e-146
1gz4_A551 Molecular Mechanism Of The Regulation Of Human Mito 1e-146
3nv9_A487 Crystal Structure Of Entamoeba Histolytica Malic En 5e-21
2dvm_A439 Nad Complex Structure Of Ph1275 Protein From Pyroco 3e-18
1ww8_A439 Crystal Structure Of Malic Enzyme From Pyrococcus H 4e-18
2a9f_A398 Crystal Structure Of A Putative Malic Enzyme ((S)- 6e-13
2hae_A386 Crystal Structure Of A Putative Malic Enzyme (Malat 3e-12
1vl6_A388 Crystal Structure Of Nad-Dependent Malic Enzyme (Tm 3e-11
>pdb|2AW5|A Chain A, Crystal Structure Of A Human Malic Enzyme Length = 575 Back     alignment and structure 
Iteration: 1

 Score =  572 bits (1475), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 280/557 (50%), Positives = 371/557 (66%), Gaps = 7/557 (1%)
Query: 58  GEDFATEDQLITPWTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQ 117
           G D  TE+     +  S+  GY L R+P  NK LAFT  ER    + GLLPP+  +QE+Q
Sbjct: 10  GVDLGTENL----YFQSMQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQ 65
Query: 118 EKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYG 177
             R++ N         RY+ +MDLQ+RNE+LFY++L  ++E+ +P+VYTPTVG ACQ+Y 
Sbjct: 66  VLRVVKNFEHLNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYS 125
Query: 178 SIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKL 237
            +FR+P+GL+I++ ++G I  VL  WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKL
Sbjct: 126 LVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKL 185
Query: 238 SLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQ 297
           +LYTA GG+ P  CLP+ +DVGT NE+LL D  YIGLRQ+R  G EY + L EFM AV  
Sbjct: 186 ALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSS 245
Query: 298 NYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLAD 357
            YG   LIQFEDFAN NAF LL+KY + +  FNDDIQGTASV +AG+L+AL++    L+D
Sbjct: 246 KYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSD 305
Query: 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK 417
           QT LF GAGEA  GIA LI + + K+   P E+A KKIWLVDSKGLIV  R  SL   K+
Sbjct: 306 QTILFQGAGEAALGIAHLIVMALEKE-GLPKEKAIKKIWLVDSKGLIVKGRA-SLTQEKE 363
Query: 418 PWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQ 477
            +AHEH  +K+L   V+ IKPT L+G + +G  F++++++ MA+FNE+P+IFALSNPTS+
Sbjct: 364 KFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSK 423
Query: 478 SECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPXXXXXXIISGAIR 536
           +EC+AE+ Y  +KG+AIFASGSPFDPV   NG+   PGQGNN+Y+FP      +  G  +
Sbjct: 424 AECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQ 483
Query: 537 VRDEMXXXXXXXXXXQVTQEHFDKGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPR 596
           + D +          QV+ +H ++G +YPP   IR              Y    A+  P 
Sbjct: 484 ITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPE 543
Query: 597 PKDLVSYAESCMYSPMY 613
           P++  ++  S MYS  Y
Sbjct: 544 PQNKEAFVRSQMYSTDY 560
>pdb|1GQ2|A Chain A, Malic Enzyme From Pigeon Liver Length = 555 Back     alignment and structure
>pdb|1GZ3|A Chain A, Molecular Mechanism For The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 554 Back     alignment and structure
>pdb|1LLQ|A Chain A, Crystal Structure Of Malic Enzyme From Ascaris Suum Complexed With Nicotinamide Adenine Dinucleotide Length = 605 Back     alignment and structure
>pdb|1QR6|A Chain A, Human Mitochondrial Nad(P)-Dependent Malic Enzyme Length = 584 Back     alignment and structure
>pdb|1EFK|A Chain A, Structure Of Human Malic Enzyme In Complex With Ketomalonate Length = 584 Back     alignment and structure
>pdb|1DO8|A Chain A, Crystal Structure Of A Closed Form Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme Length = 564 Back     alignment and structure
>pdb|1GZ4|A Chain A, Molecular Mechanism Of The Regulation Of Human Mitochondrial Nad(P)+-Dependent Malic Enzyme By Atp And Fumarate Length = 551 Back     alignment and structure
>pdb|3NV9|A Chain A, Crystal Structure Of Entamoeba Histolytica Malic Enzyme Length = 487 Back     alignment and structure
>pdb|2DVM|A Chain A, Nad Complex Structure Of Ph1275 Protein From Pyrococcus Horikoshii Length = 439 Back     alignment and structure
>pdb|1WW8|A Chain A, Crystal Structure Of Malic Enzyme From Pyrococcus Horikoshii Ot3 Length = 439 Back     alignment and structure
>pdb|2A9F|A Chain A, Crystal Structure Of A Putative Malic Enzyme ((S)- Malate:nad+ Oxidoreductase (Decarboxylating)) Length = 398 Back     alignment and structure
>pdb|2HAE|A Chain A, Crystal Structure Of A Putative Malic Enzyme (Malate Oxidoreductase) Length = 386 Back     alignment and structure
>pdb|1VL6|A Chain A, Crystal Structure Of Nad-Dependent Malic Enzyme (Tm0542) From Thermotoga Maritima At 2.61 A Resolution Length = 388 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 0.0
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 0.0
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 0.0
3nv9_A487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 2e-44
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 9e-42
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 9e-35
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 1e-33
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Length = 555 Back     alignment and structure
 Score =  882 bits (2282), Expect = 0.0
 Identities = 287/541 (53%), Positives = 386/541 (71%), Gaps = 3/541 (0%)

Query: 78  GYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVA 137
           GY +LRDP  NKG+AFT  ER    + GLLPP  + Q+ Q   ++ N  +    L RY+ 
Sbjct: 3   GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYIL 62

Query: 138 MMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKIL 197
           +M LQ+RNE+LFYK+L  ++E  +P+VYTPTVG ACQ YG  FRRP+GL+I++ ++G I 
Sbjct: 63  LMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIA 122

Query: 198 EVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITID 257
            +L++WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKL+LYTA GG++P  CLP+ +D
Sbjct: 123 TMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLD 182

Query: 258 VGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE 317
           VGT+NE LL D  YIGLR KR  GQ Y +LL EFM AV   YG   LIQFEDFAN NAF 
Sbjct: 183 VGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFR 242

Query: 318 LLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIA 377
           LL KY + +  FNDDIQGTASV +AG+L+AL++    L+D T LF GAGEA  GIA LI 
Sbjct: 243 LLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIV 302

Query: 378 LEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437
           + M K+     EEA K+IW+VDSKGLIV  R  SL   K+ +AHEH  +K+L D VK IK
Sbjct: 303 MAMQKE-GVSKEEAIKRIWMVDSKGLIVKGR-ASLTPEKEHFAHEHCEMKNLEDIVKDIK 360

Query: 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFAS 497
           PT+L+G + +G  FT+++++ MA+FN++P+IFALSNPTS++ECTAE+ Y +++G+ IFAS
Sbjct: 361 PTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFAS 420

Query: 498 GSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVTQE 556
           GSPFDPV   +G+   PGQGNN+Y+FPG+ LG+I  G   + D++ L  +E +A +V++E
Sbjct: 421 GSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEE 480

Query: 557 HFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSY 616
           +  +G +YPP   I+++S  IA ++A +AY    AS  P+P+DL ++  S +YS  Y  +
Sbjct: 481 NLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCF 540

Query: 617 R 617
            
Sbjct: 541 V 541
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Length = 564 Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Length = 605 Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Length = 487 Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Length = 398 Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Length = 388 Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Length = 439 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query617
1gq2_A555 Malic enzyme; oxidoreductase, pigeon liver, NADP-d 100.0
1pj3_A564 NAD-dependent malic enzyme, mitochondrial; oxidati 100.0
1o0s_A605 NAD-ME, NAD-dependent malic enzyme; oxidoreductase 100.0
3nv9_A487 Malic enzyme; rossmann fold, oxidoreductase; 2.25A 100.0
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 100.0
1vl6_A388 Malate oxidoreductase; TM0542, NAD-dependent malic 100.0
2dvm_A439 Malic enzyme, 439AA long hypothetical malate oxido 100.0
3h9u_A436 Adenosylhomocysteinase; NAD CO-factor complex, str 98.82
3gvp_A435 Adenosylhomocysteinase 3; protein CO-factor comple 98.79
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 98.16
3n58_A464 Adenosylhomocysteinase; ssgcid, hydrolase, structu 97.83
3ond_A488 Adenosylhomocysteinase; plant protein, enzyme-subs 97.75
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 97.13
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 97.11
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 96.8
3k92_A424 NAD-GDH, NAD-specific glutamate dehydrogenase; ROC 96.45
3d4o_A293 Dipicolinate synthase subunit A; NP_243269.1, stru 96.35
3aoe_E419 Glutamate dehydrogenase; rossmann fold, NADH, oxid 96.07
4fcc_A450 Glutamate dehydrogenase; protein complex, rossmann 96.06
1a4i_A301 Methylenetetrahydrofolate dehydrogenase / methenyl 95.97
3jyo_A283 Quinate/shikimate dehydrogenase; enzyme-cofactor c 95.85
3l07_A285 Bifunctional protein fold; structural genomics, ID 95.83
3p2o_A285 Bifunctional protein fold; structural genomics, ce 95.49
3r3j_A456 Glutamate dehydrogenase; rossman fold, oxidoreduct 95.45
3ngx_A276 Bifunctional protein fold; methylenetetrahydrofola 95.43
1b0a_A288 Protein (fold bifunctional protein); folate, dehyd 95.31
3tri_A280 Pyrroline-5-carboxylate reductase; amino acid bios 95.28
4a5o_A286 Bifunctional protein fold; oxidoreductase, hydrola 95.26
2yfq_A421 Padgh, NAD-GDH, NAD-specific glutamate dehydrogena 95.21
3aog_A440 Glutamate dehydrogenase; NAD(H), oxidoreducta; HET 95.13
4a26_A300 Putative C-1-tetrahydrofolate synthase, cytoplasm; 95.01
1edz_A320 5,10-methylenetetrahydrofolate dehydrogenase; nucl 94.92
2bma_A470 Glutamate dehydrogenase (NADP+); malaria, drug des 94.89
3tnl_A315 Shikimate dehydrogenase; structural genomics, cent 94.88
3t4e_A312 Quinate/shikimate dehydrogenase; structural genomi 94.81
1gpj_A404 Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro 94.74
3don_A277 Shikimate dehydrogenase; alpha-beta structure, ros 94.74
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 94.7
1v8b_A479 Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 94.64
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 94.61
2egg_A297 AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff 94.25
1v9l_A421 Glutamate dehydrogenase; protein-NAD complex, oxid 94.16
2tmg_A415 Protein (glutamate dehydrogenase); metabolic role, 94.11
1c1d_A355 L-phenylalanine dehydrogenase; amino acid dehydrog 94.03
2c2x_A281 Methylenetetrahydrofolate dehydrogenase- methenylt 93.99
2rir_A300 Dipicolinate synthase, A chain; structural genomic 93.94
3u62_A253 Shikimate dehydrogenase; shikimate pathway, oxidor 93.84
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 93.84
1leh_A364 Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi 93.61
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 93.32
1bgv_A449 Glutamate dehydrogenase; oxidoreductase; HET: GLU; 93.3
3u95_A 477 Glycoside hydrolase, family 4; hydrolysis, cytosol 93.22
3d64_A494 Adenosylhomocysteinase; structural genomics, ssgci 93.19
1mld_A314 Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D 92.98
3fbt_A282 Chorismate mutase and shikimate 5-dehydrogenase fu 92.97
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 92.96
3o8q_A281 Shikimate 5-dehydrogenase I alpha; structural geno 92.85
3pwz_A272 Shikimate dehydrogenase 3; alpha-beta, oxidoreduct 92.56
1hyh_A309 L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 92.32
3tum_A269 Shikimate dehydrogenase family protein; rossmann-f 92.08
2o4c_A380 Erythronate-4-phosphate dehydrogenase; erythronate 92.03
3fef_A 450 Putative glucosidase LPLD; gulosidase, structural 91.96
1gtm_A419 Glutamate dehydrogenase; oxidoreductase, NAD, NADP 91.87
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 91.75
1obb_A 480 Maltase, alpha-glucosidase; glycosidase, sulfinic 91.64
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 91.63
3mw9_A501 GDH 1, glutamate dehydrogenase 1; allostery, inhib 91.54
3oet_A381 Erythronate-4-phosphate dehydrogenase; structural 91.23
2ekl_A313 D-3-phosphoglycerate dehydrogenase; structural gen 91.08
3ce6_A494 Adenosylhomocysteinase; protein-substrate complex, 90.9
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 90.89
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 90.83
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 90.6
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 90.52
1b8p_A329 Protein (malate dehydrogenase); oxidoreductase; 1. 90.52
3hdj_A313 Probable ornithine cyclodeaminase; APC62486, borde 90.49
1p77_A272 Shikimate 5-dehydrogenase; NADPH, oxidoreductase; 90.4
2i6t_A303 Ubiquitin-conjugating enzyme E2-like isoform A; L- 90.35
1x7d_A350 Ornithine cyclodeaminase; binds NAD+, binds L-orni 90.12
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 89.96
1lu9_A287 Methylene tetrahydromethanopterin dehydrogenase; a 89.79
1zud_1251 Adenylyltransferase THIF; thiamin, thiazole, prote 89.78
2gcg_A330 Glyoxylate reductase/hydroxypyruvate reductase; NA 89.78
2dbq_A334 Glyoxylate reductase; D-3-phosphoglycerate dehydro 89.7
1o6z_A303 MDH, malate dehydrogenase; halophilic, ION-binding 89.57
1t2d_A322 LDH-P, L-lactate dehydrogenase; ternary complex, o 89.51
1s6y_A 450 6-phospho-beta-glucosidase; hydrolase, structural 89.35
2rcy_A262 Pyrroline carboxylate reductase; malaria, structur 89.34
2i99_A312 MU-crystallin homolog; thyroid hormine binding pro 89.3
1u8x_X 472 Maltose-6'-phosphate glucosidase; structural genom 88.98
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 88.92
2hk9_A275 Shikimate dehydrogenase; shikimate pathway, drug d 88.86
2zqz_A326 L-LDH, L-lactate dehydrogenase; oxidoreductase, ro 88.8
1ldn_A316 L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA 88.79
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 88.6
1ez4_A318 Lactate dehydrogenase; rossmann fold, oxidoreducta 88.52
1a5z_A319 L-lactate dehydrogenase; oxidoreductase, glycolysi 88.29
4g2n_A345 D-isomer specific 2-hydroxyacid dehydrogenase, Na; 88.24
3ba1_A333 HPPR, hydroxyphenylpyruvate reductase; two domain 88.03
2d5c_A263 AROE, shikimate 5-dehydrogenase; substrate, dimer, 88.02
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 88.0
1omo_A322 Alanine dehydrogenase; two-domain, beta-sandwich-d 87.77
1y6j_A318 L-lactate dehydrogenase; southeast collaboratory f 87.76
1wwk_A307 Phosphoglycerate dehydrogenase; riken structural g 87.7
1up7_A 417 6-phospho-beta-glucosidase; hydrolase, family4 hyd 87.7
3d0o_A317 L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly 87.7
3k5p_A416 D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, 87.69
2zyd_A 480 6-phosphogluconate dehydrogenase, decarboxylating; 87.6
3vku_A326 L-LDH, L-lactate dehydrogenase; rossmann fold, NAD 87.26
1nvt_A287 Shikimate 5'-dehydrogenase; structural genomics, P 87.04
1smk_A326 Malate dehydrogenase, glyoxysomal; tricarboxylic c 86.79
3jtm_A351 Formate dehydrogenase, mitochondrial; mitochondrio 86.47
3gt0_A247 Pyrroline-5-carboxylate reductase; structural geno 86.46
3d1l_A266 Putative NADP oxidoreductase BF3122; structural ge 86.37
2j6i_A364 Formate dehydrogenase; oxidoreductase, D-specific- 86.29
2cuk_A311 Glycerate dehydrogenase/glyoxylate reductase; stru 86.24
3gvi_A324 Malate dehydrogenase; NAD, oxidoreductase, tricarb 86.21
3h8v_A292 Ubiquitin-like modifier-activating enzyme 5; rossm 86.07
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 85.89
1oju_A294 MDH, malate dehydrogenase; hyperthermophilic, oxid 85.88
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 85.88
1npy_A271 Hypothetical shikimate 5-dehydrogenase-like protei 85.81
1xdw_A331 NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas 85.72
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 85.67
1hdo_A206 Biliverdin IX beta reductase; foetal metabolism, H 85.64
4dgs_A340 Dehydrogenase; structural genomics, PSI-biology, N 85.62
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 85.59
3rui_A340 Ubiquitin-like modifier-activating enzyme ATG7; au 85.47
1ur5_A309 Malate dehydrogenase; oxidoreductase, tricarboxyli 85.29
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 85.25
2d0i_A333 Dehydrogenase; structural genomics, NPPSFA, nation 85.12
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 85.11
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 85.08
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 84.95
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 84.94
2p4q_A 497 6-phosphogluconate dehydrogenase, decarboxylating; 84.82
4hy3_A365 Phosphoglycerate oxidoreductase; PSI-biology, stru 84.76
3p7m_A321 Malate dehydrogenase; putative dehydrogenase, enzy 84.61
2xxj_A310 L-LDH, L-lactate dehydrogenase; oxidoreductase, hy 84.54
4gsl_A615 Ubiquitin-like modifier-activating enzyme ATG7; ub 84.18
3nep_X314 Malate dehydrogenase; halophIle, molecular adpatat 84.12
3tl2_A315 Malate dehydrogenase; center for structural genomi 84.09
3lk7_A 451 UDP-N-acetylmuramoylalanine--D-glutamate ligase; a 83.85
4ina_A 405 Saccharopine dehydrogenase; structural genomics, P 83.85
2d4a_B308 Malate dehydrogenase; archaea, hyperthermophIle, o 83.75
1jw9_B249 Molybdopterin biosynthesis MOEB protein; MOEB: mod 83.58
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 83.35
2iz1_A 474 6-phosphogluconate dehydrogenase, decarboxylating; 83.29
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 83.19
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 83.07
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 82.67
3hg7_A324 D-isomer specific 2-hydroxyacid dehydrogenase FAM 82.56
3vh1_A598 Ubiquitin-like modifier-activating enzyme ATG7; au 82.47
1x0v_A354 GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase 82.36
1y7t_A327 Malate dehydrogenase; NAD-dependent-MDH-NADPH comp 82.28
2yq5_A343 D-isomer specific 2-hydroxyacid dehydrogenase; oxi 82.25
3abi_A 365 Putative uncharacterized protein PH1688; L-lysine 82.12
3gvx_A290 Glycerate dehydrogenase related protein; NYSGXRC, 81.71
3evt_A324 Phosphoglycerate dehydrogenase; structural genomic 81.63
3pqe_A326 L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas 81.61
1qp8_A303 Formate dehydrogenase; oxidoreductase; HET: NDP; 2 81.52
4fgw_A391 Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi 81.43
2w2k_A348 D-mandelate dehydrogenase; 2-hydroxyacid dehydroge 81.42
1pgj_A 478 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o 81.35
2pi1_A334 D-lactate dehydrogenase; oxidoreductase, D-LDH, NA 81.35
4egb_A346 DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce 81.34
1hye_A313 L-lactate/malate dehydrogenase; nucleotide binding 81.29
3k6j_A 460 Protein F01G10.3, confirmed by transcript evidenc; 80.95
1dxy_A333 D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc 80.93
3h5n_A353 MCCB protein; ubiquitin-activating enzyme, microci 80.59
3phh_A269 Shikimate dehydrogenase; shikimate pathway, helico 80.52
1sc6_A404 PGDH, D-3-phosphoglycerate dehydrogenase; alloster 80.49
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 80.09
2nac_A393 NAD-dependent formate dehydrogenase; oxidoreductas 80.08
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A Back     alignment and structure
Probab=100.00  E-value=1.6e-207  Score=1673.67  Aligned_cols=540  Identities=53%  Similarity=0.958  Sum_probs=532.5

Q ss_pred             ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhhHHHHHHHHhhhhhhhHHHhhc
Q 007112           76 ASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLID  155 (617)
Q Consensus        76 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~  155 (617)
                      ++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus         1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~   80 (555)
T 1gq2_A            1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS   80 (555)
T ss_dssp             CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence            37999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhh
Q 007112          156 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVG  235 (617)
Q Consensus       156 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG  235 (617)
                      |++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus        81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG  160 (555)
T 1gq2_A           81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG  160 (555)
T ss_dssp             THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred             hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcH
Q 007112          236 KLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA  315 (617)
Q Consensus       236 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~A  315 (617)
                      |++|||+||||||++|||||||||||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus       161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a  240 (555)
T 1gq2_A          161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA  240 (555)
T ss_dssp             HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred             HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007112          316 FELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI  395 (617)
Q Consensus       316 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i  395 (617)
                      |++|+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus       241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i  319 (555)
T 1gq2_A          241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI  319 (555)
T ss_dssp             HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred             HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999985 99999999999


Q ss_pred             EEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112          396 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT  475 (617)
Q Consensus       396 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt  475 (617)
                      ||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||||
T Consensus       320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt  398 (555)
T 1gq2_A          320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT  398 (555)
T ss_dssp             EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred             EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence            99999999999996 59999999999877788999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007112          476 SQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVT  554 (617)
Q Consensus       476 ~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~  554 (617)
                      +++|||||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||+|||++++
T Consensus       399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~  478 (555)
T 1gq2_A          399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS  478 (555)
T ss_dssp             GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred             CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999 999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007112          555 QEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR  617 (617)
Q Consensus       555 ~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~  617 (617)
                      ++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|.|++|+
T Consensus       479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~  541 (555)
T 1gq2_A          479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV  541 (555)
T ss_dssp             HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred             cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence            999999999999999999999999999999999999998888899999999999999999874
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A* Back     alignment and structure
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A* Back     alignment and structure
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica} Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* Back     alignment and structure
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* Back     alignment and structure
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Back     alignment and structure
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Back     alignment and structure
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A Back     alignment and structure
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Back     alignment and structure
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} Back     alignment and structure
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E Back     alignment and structure
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* Back     alignment and structure
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Back     alignment and structure
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} Back     alignment and structure
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} Back     alignment and structure
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum} Back     alignment and structure
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A Back     alignment and structure
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 Back     alignment and structure
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} Back     alignment and structure
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus} Back     alignment and structure
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A Back     alignment and structure
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} Back     alignment and structure
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* Back     alignment and structure
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum} Back     alignment and structure
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* Back     alignment and structure
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* Back     alignment and structure
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 Back     alignment and structure
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Back     alignment and structure
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A Back     alignment and structure
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Back     alignment and structure
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A Back     alignment and structure
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Back     alignment and structure
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Back     alignment and structure
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A Back     alignment and structure
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A* Back     alignment and structure
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Back     alignment and structure
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Back     alignment and structure
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* Back     alignment and structure
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} Back     alignment and structure
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} Back     alignment and structure
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Back     alignment and structure
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A* Back     alignment and structure
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} Back     alignment and structure
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} Back     alignment and structure
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Back     alignment and structure
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} Back     alignment and structure
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* Back     alignment and structure
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Back     alignment and structure
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Back     alignment and structure
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A Back     alignment and structure
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A Back     alignment and structure
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Back     alignment and structure
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Back     alignment and structure
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Back     alignment and structure
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} Back     alignment and structure
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} Back     alignment and structure
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Back     alignment and structure
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} Back     alignment and structure
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* Back     alignment and structure
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A Back     alignment and structure
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Back     alignment and structure
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} Back     alignment and structure
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A Back     alignment and structure
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Back     alignment and structure
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} Back     alignment and structure
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Back     alignment and structure
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* Back     alignment and structure
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Back     alignment and structure
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A Back     alignment and structure
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} Back     alignment and structure
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Back     alignment and structure
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A Back     alignment and structure
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} Back     alignment and structure
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Back     alignment and structure
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Back     alignment and structure
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* Back     alignment and structure
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Back     alignment and structure
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} Back     alignment and structure
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Back     alignment and structure
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Back     alignment and structure
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A Back     alignment and structure
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} Back     alignment and structure
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} Back     alignment and structure
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Back     alignment and structure
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Back     alignment and structure
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A Back     alignment and structure
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* Back     alignment and structure
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Back     alignment and structure
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* Back     alignment and structure
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} Back     alignment and structure
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} Back     alignment and structure
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Back     alignment and structure
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Back     alignment and structure
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae} Back     alignment and structure
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B Back     alignment and structure
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Back     alignment and structure
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Back     alignment and structure
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Back     alignment and structure
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} Back     alignment and structure
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 Back     alignment and structure
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A Back     alignment and structure
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* Back     alignment and structure
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 617
d1o0sa2294 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent 1e-139
d1gq2a2257 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent 1e-137
d1pj3a2259 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent 1e-135
d1pj3a1294 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent 1e-109
d1o0sa1308 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent 1e-108
d1gq2a1298 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent 1e-101
d1vl6a1222 c.2.1.7 (A:155-376) Malate oxidoreductase (malic e 3e-50
d1vl6a2154 c.58.1.3 (A:1-154) Malate oxidoreductase (malic en 9e-06
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 294 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

 Score =  405 bits (1043), Expect = e-139
 Identities = 150/288 (52%), Positives = 194/288 (67%), Gaps = 10/288 (3%)

Query: 55  DVYGEDFATEDQLITP--------WTVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGL 106
           DVY  +    D+                      LL++PR NKG+ F+  ER    L GL
Sbjct: 7   DVYSHNLPPMDEKEMALYKLYRPERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGL 66

Query: 107 LPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLIDNVEELLPVVYT 166
           LPPA M QE Q  R++  LR+    L RY+ +  LQ+RNE+LFY+++ D+V+EL+P+VYT
Sbjct: 67  LPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYT 126

Query: 167 PTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERNIQVIVVTDGERILGLGD 224
           PTVG ACQ +G I+R+P+GLYI++ +    KI ++L NW E +++ IVVTDGERILGLGD
Sbjct: 127 PTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGD 186

Query: 225 LGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEY 284
           LG  G+GIPVGKL+LY ALGG++P  CLP+ +DVGTNN  LLND FYIGLR KR  G++Y
Sbjct: 187 LGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDY 246

Query: 285 AELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDD 332
             LL  FM A  + YG+K LIQFEDFAN NAF LL KY   + +FNDD
Sbjct: 247 DTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDD 294
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 257 Back     information, alignment and structure
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Length = 308 Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Length = 298 Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 222 Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Length = 154 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query617
d1gq2a2257 Mitochondrial NAD(P)-dependent malic enzyme {Domes 100.0
d1pj3a2259 Mitochondrial NAD(P)-dependent malic enzyme {Human 100.0
d1o0sa2294 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 100.0
d1gq2a1298 Mitochondrial NAD(P)-dependent malic enzyme {Domes 100.0
d1o0sa1308 Mitochondrial NAD(P)-dependent malic enzyme {Pig r 100.0
d1pj3a1294 Mitochondrial NAD(P)-dependent malic enzyme {Human 100.0
d1vl6a1222 Malate oxidoreductase (malic enzyme) {Thermotoga m 100.0
d1vl6a2154 Malate oxidoreductase (malic enzyme) {Thermotoga m 99.96
d1gpja2159 Glutamyl tRNA-reductase middle domain {Archaeon Me 98.22
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 96.87
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 95.84
d1luaa1191 Methylene-tetrahydromethanopterin dehydrogenase {M 95.43
d1v9la1242 Glutamate dehydrogenase {Pyrobaculum islandicum [T 95.42
d1b26a1234 Glutamate dehydrogenase {Thermotoga maritima [TaxI 95.32
d1li4a1163 S-adenosylhomocystein hydrolase {Human (Homo sapie 95.17
d1c1da1201 Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ 94.96
d1obba1171 Alpha-glucosidase AglA {Thermotoga maritima [TaxId 94.8
d1s6ya1169 6-phospho-beta-glucosidase {Bacillus stearothermop 94.77
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 94.4
d1v8ba1163 S-adenosylhomocystein hydrolase {Plasmodium falcip 94.34
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 94.05
d1up7a1162 6-phospho-beta-glucosidase {Thermotoga maritima [T 93.97
d1mlda1144 Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 93.9
d1gtma1239 Glutamate dehydrogenase {Archaeon Pyrococcus furio 93.5
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 93.46
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 93.24
d1vjta1193 Putative alpha-glucosidase TM0752 {Thermotoga mari 93.16
d1sc6a1188 Phosphoglycerate dehydrogenase {Escherichia coli [ 92.91
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 92.89
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 92.74
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 92.55
d1j4aa1197 D-lactate dehydrogenase {Lactobacillus helveticus 92.44
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 92.43
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 92.32
d1bgva1255 Glutamate dehydrogenase {Clostridium symbiosum [Ta 92.23
d1u8xx1167 Maltose-6'-phosphate glucosidase GlvA {Bacillus su 92.18
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 92.02
d1nvta1177 Shikimate 5-dehydrogenase AroE {Archaeon Methanoco 91.96
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 91.65
d1leha1230 Leucine dehydrogenase {Bacillus sphaericus [TaxId: 91.42
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 91.41
d1f8fa2174 Benzyl alcohol dehydrogenase {Acinetobacter calcoa 91.36
d2cmda1145 Malate dehydrogenase {Escherichia coli [TaxId: 562 91.11
d1gdha1191 D-glycerate dehydrogenase {Hyphomicrobium methylov 91.04
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 90.67
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 90.56
d1dxya1199 D-2-hydroxyisocaproate dehydrogenase {Lactobacillu 90.27
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 90.26
d1mx3a1193 Transcription corepressor CtbP {Human (Homo sapien 89.95
d1a5za1140 Lactate dehydrogenase {Thermotoga maritima [TaxId: 89.87
d2naca1188 Formate dehydrogenase {Pseudomonas sp., strain 101 89.74
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 89.34
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 88.92
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 88.86
d1qp8a1181 Putative formate dehydrogenase {Archaeon Pyrobacul 88.85
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 88.77
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 88.7
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 88.49
d1jw9b_247 Molybdenum cofactor biosynthesis protein MoeB {Esc 88.07
d1hwxa1293 Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 88.01
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 87.53
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 87.5
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 87.22
d1o6za1142 Malate dehydrogenase {Archaeon Haloarcula marismor 86.97
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 86.84
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 86.56
d1ojua1142 Malate dehydrogenase {Archaeon Archaeoglobus fulgi 86.06
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 85.73
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 85.59
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 85.25
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 84.91
d1seza1 373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 84.72
d1b0aa1166 Methylenetetrahydrofolate dehydrogenase/cyclohydro 84.26
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 84.0
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 83.56
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 83.25
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 82.93
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 81.25
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 80.77
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 80.35
d1tk9a_188 Phosphoheptose isomerase GmhA1 {Campylobacter jeju 80.17
d1ygya1184 Phosphoglycerate dehydrogenase {Mycobacterium tube 80.09
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 80.04
>d1gq2a2 c.58.1.3 (A:23-279) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Aminoacid dehydrogenase-like, N-terminal domain
superfamily: Aminoacid dehydrogenase-like, N-terminal domain
family: Malic enzyme N-domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=100.00  E-value=3.2e-117  Score=885.00  Aligned_cols=257  Identities=58%  Similarity=1.054  Sum_probs=255.7

Q ss_pred             ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhhHHHHHHHHhhhhhhhHHHhhc
Q 007112           76 ASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLID  155 (617)
Q Consensus        76 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~  155 (617)
                      ++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++||+.+|+++++||+||+||++||++||+|||++|++
T Consensus         1 krG~~lL~~p~~NKGtAFt~~ER~~l~l~GLLP~~v~tle~Qv~r~~~~~~~~~~~l~Ky~yL~~L~~~Ne~LFY~ll~~   80 (257)
T d1gq2a2           1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS   80 (257)
T ss_dssp             CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             CChHHHhcCCCccCccCCCHHHHHHcCCccCCCCCccCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHhChHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhh
Q 007112          156 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVG  235 (617)
Q Consensus       156 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG  235 (617)
                      |++||||||||||||+|||+||++||+|+|||||++|+|+|+++|+|||.++|++||||||||||||||||+||||||+|
T Consensus        81 ~~~e~~PivYTPTVG~Ac~~ys~~yr~prGlyis~~d~g~i~~il~nwp~~~V~~iVVTDG~rILGlGD~G~~Gm~I~~g  160 (257)
T d1gq2a2          81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG  160 (257)
T ss_dssp             THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred             HHHHhcCcccCccHHHHHHHHhhhhccccceeeccCChHHHHHHHHhCCCCCeeEEEEecCceeeecCCcCcCccchhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcH
Q 007112          236 KLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA  315 (617)
Q Consensus       236 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~A  315 (617)
                      |++|||+||||||++|||||||||||||+||+||+|+|+||+|++|++|++||||||+||+++|||+++||||||+++||
T Consensus       161 Kl~lyta~~Gi~P~~~LPv~LDvGTnNe~LL~DP~YlG~R~~R~~g~eY~~fvdefv~av~~~~p~~~~i~~EDf~~~na  240 (257)
T d1gq2a2         161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA  240 (257)
T ss_dssp             HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred             HHHHHHHhcCCCHhhcCCeeecCCCChHHHhcCcccccccCCCCcchHHHHHHHHHHHHHHHhCCCCCEEehhhcCCchH
Confidence            99999999999999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             HHHHHHHcCCCceeecC
Q 007112          316 FELLSKYSSSHLVFNDD  332 (617)
Q Consensus       316 f~lL~ryr~~~~~FNDD  332 (617)
                      |++|+|||+++||||||
T Consensus       241 ~~~L~~yr~~~~~FNDD  257 (257)
T d1gq2a2         241 FRLLHKYRNKYCTFNDD  257 (257)
T ss_dssp             HHHHHHHTTTSEEEETT
T ss_pred             HHHHHHHccCCCccCCC
Confidence            99999999999999999
>d1pj3a2 c.58.1.3 (A:21-279) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0sa2 c.58.1.3 (A:2-295) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]} Back     information, alignment and structure
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]} Back     information, alignment and structure
>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vl6a2 c.58.1.3 (A:1-154) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} Back     information, alignment and structure
>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} Back     information, alignment and structure
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} Back     information, alignment and structure
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1tk9a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure