Citrus Sinensis ID: 007116

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
MSGLEILGANDEIRERRSDFENSEDERRRSRIGSLKKKAINASNKFTHSLKRRGKRKIDYRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQKFDSYIHIRPVKGRTSDTLTAESGSDVDDHCSTSGRRSSAPCLAPVHEEARDPNAYYSCEDNFTLAEKSVKNDRFRNSPKQSIRSNDVGDISCDAISNSEGSSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQNDIHPSNLLEENTNSHLPAVEAVNEEDLVVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALENLRQSKFHQRRLFC
cccccccccccHHHHccccccccHHHHHHccccccccccccccHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccEEEEEcccccHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHcccccHHHcccEEEEccccHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEEEEEccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
ccccEEEEccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHHHcccEEEEEcccccEEEEEcHHHccHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccEEEEEEcccccHccccHHHHHHHHHHHHcccccccccccEEEEEEccHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHccHHHccHHcccccccccccccccccccccccHHHHHHHHccccccccEEEEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccHccccHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MSGLEIlgandeirerrsdfensedERRRSRIGSLKKKAINASNKFTHSLKRrgkrkidyrvpsvpiedvrdEREESAVLELRQKLLerdllpprqddYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYgtdtiledfEFEELEEVLQYypqgyhgvdkegrPVYIELLGkahpsrlmrITTVDRYLKYHVQEFERALLERFPACSVAAKRricstttildvqglgmkHFTRTAANLLAAVAKvdncyypetlHQMFIVNagpgfkkmlwpaaqkfldpksiakihvlepkslgkllevidasqlpdflggsctcsveggclrsnkgpwnepeIMKLVHNAGATVVRQVsrvhddrqkfdsyihirpvkgrtsdtltaesgsdvddhcstsgrrssapclapvheeardpnayyscednFTLAEksvkndrfrnspkqsirsndvgdiscdaisnsegsSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRrqndihpsnlleentnshlpaveavneedlvVPCIERLQKLEKAYEELrhkpaaipleKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALENLRQskfhqrrlfc
msgleilgandeirerrsdfensederrrsrigslkkkainasnkfthslkrrgkrkidyrvpsvpiedvrdereESAVLELRQKllerdllpprqddYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLgkahpsrlmrITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQvsrvhddrqkfdsyihirpvkgrtsdtltaesgsdvddhcstsgrrssapclaPVHEEARDPNAYYSCEDNFTLaeksvkndrfrnspkqsirsndvgdiSCDAISNSEGSSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQNDIHPSNLLEENTNSHLPAVEAVNEEDLVVPCIERLQKLEKAYEELRhkpaaiplekeQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALenlrqskfhqrrlfc
MSGLEILGANDEIRERRSDFENSEDERRRSRIGSLKKKAINASNKFTHSLKRRGKRKIDYRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTIledfefeeleeVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQKFDSYIHIRPVKGRTSDTLTAESGSDVDDHCSTSGRRSSAPCLAPVHEEARDPNAYYSCEDNFTLAEKSVKNDRFRNSPKQSIRSNDVGDISCDAISNSEGSSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQNDIHPSNLLEENTNSHLPAVEAVNEEDLVVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALENLRQSKFHQRRLFC
*************************************************************************************LLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQKFDSYIHIRP*********************************************YYSCEDNF**************************************SSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQNDIHPSNLL******HLPAVEAVNEEDLVVPCIERLQKLEKAYEEL**********************************VLHATVVKQHEI*******************
*****************************************************************************AVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQ*****************************************************************YSCEDNFTLAEKSVKNDRF**************************************KFEGGNIQGVARMLLSFMVRIFAIFGSLQLI**********************************PCIERLQKLEKAYEELRHKPA*IPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALEN*****FHQRRLFC
MSGLEILGANDEIRERR***************GSLKKKAINASNKFTHSLKRRGKRKIDYRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQKFDSYIHIRPVKGRT***************************LAPVHEEARDPNAYYSCEDNFTLAEKSVKNDRFRNSPKQSIRSNDVGDISCDAISNSEGSSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQNDIHPSNLLEENTNSHLPAVEAVNEEDLVVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALENLRQSK********
***********************E*****S*IGSLKKKAINASNKFTHSLKRR******YRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQKFDSYI*************************************************YYSCEDNFTLAEKSVK******************************SSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQN********************AVNEEDLVVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALENLRQSKFHQ***FC
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSGLEILGANDEIRERRSDFENSEDERRRSRIGSLKKKAINASNKFTHSLKRRGKRKIDYRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQKFDSYIHIRPVKGRTSDTLTAESGSDVDDHCSTSGRRSSAPCLAPVHEEARDPNAYYSCEDNFTLAEKSVKNDRFRNSPKQSIRSNDVGDISCDAISNSEGSSVVHLFNMVKEKFEGGNIQGVARMLLSFMVRIFAIFGSLQLIWRRQNDIHPSNLLEENTNSHLPAVEAVNEEDLVVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVKQHEIAEALENLRQSKFHQRRLFC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query617 2.2.26 [Sep-21-2011]
Q10137286 Sec14 cytosolic factor OS yes no 0.384 0.828 0.400 3e-46
P24859301 SEC14 cytosolic factor OS yes no 0.418 0.857 0.408 5e-45
P45816492 SEC14 cytosolic factor OS yes no 0.414 0.520 0.381 1e-44
P24280304 SEC14 cytosolic factor OS yes no 0.423 0.858 0.379 2e-43
P53989302 SEC14 cytosolic factor OS yes no 0.411 0.841 0.384 8e-43
Q75DK1308 SEC14 cytosolic factor OS yes no 0.414 0.831 0.394 7e-42
P46250301 SEC14 cytosolic factor OS N/A no 0.411 0.843 0.372 5e-39
P33324310 CRAL-TRIO domain-containi no no 0.431 0.858 0.354 1e-37
Q0V9N0707 SEC14-like protein 5 OS=X yes no 0.390 0.340 0.334 1e-28
Q92503715 SEC14-like protein 1 OS=H yes no 0.388 0.335 0.349 1e-28
>sp|Q10137|SEC14_SCHPO Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=4 SV=1 Back     alignment and function desciption
 Score =  187 bits (474), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 149/242 (61%), Gaps = 5/242 (2%)

Query: 95  RQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQG 154
           R DD  TLLRFL+AR+FN++++++M+ +   WRKE+G D ++++F ++E E V +YYPQ 
Sbjct: 47  RLDD-ATLLRFLRARKFNLQQSLEMFIKCEKWRKEFGVDDLIKNFHYDEKEAVSKYYPQF 105

Query: 155 YHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRI 214
           YH  D +GRPVY+E LG     +L +ITT +R ++  V E+E   L+RFPACS  A   I
Sbjct: 106 YHKTDIDGRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKRFPACSRKAGGLI 165

Query: 215 CSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAA 274
            ++ TI+D++G+G+     +  + +   + +   YYPE + + +++NA  GF        
Sbjct: 166 ETSCTIMDLKGVGITSI-HSVYSYIRQASSISQDYYPERMGKFYVINAPWGFSSAF-NLI 223

Query: 275 QKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPE 334
           + FLD  ++ KIH+L       LLE I A  LP  LGG+C C   GGC  S+ GPW+E +
Sbjct: 224 KGFLDEATVKKIHILGSNYKSALLEQIPADNLPAKLGGNCQCP--GGCELSDAGPWHEEQ 281

Query: 335 IM 336
            M
Sbjct: 282 WM 283
Has a direct role in controlling cell septation and in forespore membrane formation.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P24859|SEC14_KLULA SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 Back     alignment and function description
>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1 Back     alignment and function description
>sp|Q75DK1|SEC14_ASHGO SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2 Back     alignment and function description
>sp|P46250|SEC14_CANAL SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1 Back     alignment and function description
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 Back     alignment and function description
>sp|Q0V9N0|S14L5_XENTR SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1 Back     alignment and function description
>sp|Q92503|S14L1_HUMAN SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
225462023621 PREDICTED: uncharacterized protein LOC10 0.996 0.990 0.751 0.0
255581955618 transporter, putative [Ricinus communis] 0.995 0.993 0.703 0.0
356510235620 PREDICTED: uncharacterized protein LOC10 0.995 0.990 0.682 0.0
356515404620 PREDICTED: uncharacterized protein LOC10 0.993 0.988 0.673 0.0
224122244620 predicted protein [Populus trichocarpa] 0.977 0.972 0.722 0.0
449444000617 PREDICTED: uncharacterized protein LOC10 0.991 0.991 0.672 0.0
449482622617 PREDICTED: uncharacterized protein LOC10 0.991 0.991 0.672 0.0
356560899654 PREDICTED: uncharacterized protein LOC10 0.954 0.900 0.668 0.0
30695991625 sec.4-like phosphatidylinositol transfer 1.0 0.987 0.628 0.0
30695996621 sec.4-like phosphatidylinositol transfer 0.993 0.987 0.627 0.0
>gi|225462023|ref|XP_002268040.1| PREDICTED: uncharacterized protein LOC100263435 [Vitis vinifera] gi|296089980|emb|CBI39799.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  950 bits (2456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/623 (75%), Positives = 537/623 (86%), Gaps = 8/623 (1%)

Query: 1   MSGLE-ILGANDEIRERRSDFENSEDERRRSRIGSLKKKAINASNKFTHSLKRRGKRKID 59
           MSGLE  LGA DEIRERRSD ENSEDERRRS+I  LKKKAINASNKFTHSLK+RGKRKID
Sbjct: 1   MSGLEEGLGAQDEIRERRSDLENSEDERRRSKIAHLKKKAINASNKFTHSLKKRGKRKID 60

Query: 60  YRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQM 119
           YRVPSV IEDVRD +EESAV ELRQKLL++DLLPPR DDYHTLLRFLKAREFNIERTIQM
Sbjct: 61  YRVPSVSIEDVRDAKEESAVHELRQKLLDKDLLPPRHDDYHTLLRFLKAREFNIERTIQM 120

Query: 120 WEEMLIWRKEYGTDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLM 179
           WEEML WRKEYGTDTILEDFEF+ELE+VLQYYPQGYHGVDKEGRPVYIE LGKAHPSRLM
Sbjct: 121 WEEMLNWRKEYGTDTILEDFEFKELEDVLQYYPQGYHGVDKEGRPVYIERLGKAHPSRLM 180

Query: 180 RITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLL 239
           RITT+DRYLKYHVQEFE+ALLE+FPACS+AAKRRICSTTTILDVQGLGMK+FTRTAANL+
Sbjct: 181 RITTIDRYLKYHVQEFEKALLEKFPACSIAAKRRICSTTTILDVQGLGMKNFTRTAANLV 240

Query: 240 AAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLE 299
           AA+AK+DN YYPETLH+MF+VNAGPGFKKMLWPAAQKFLDPK+I+KI VLEPK L KLLE
Sbjct: 241 AAMAKIDNNYYPETLHRMFVVNAGPGFKKMLWPAAQKFLDPKTISKIQVLEPKFLCKLLE 300

Query: 300 VIDASQLPDFLGGSCTCSVEGGCLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQK 359
           VID+SQLPDFLGGSCTC+ +GGCLRSNKGPWN+PEIMKLVHNA +  VRQ++R+ +D+QK
Sbjct: 301 VIDSSQLPDFLGGSCTCATDGGCLRSNKGPWNDPEIMKLVHNAESIFVRQITRIVNDQQK 360

Query: 360 FDSYIHIRPVKGRTSDTLTAESGSDVDDHCSTSGRRSSA-PCLAPVHEEAR--DPNAYYS 416
            DSYI IRP+KGR SDT+T ESGSDVDD CS +G+RSS+ P LAPVHEEAR  DPN+YYS
Sbjct: 361 LDSYIQIRPLKGRGSDTMTVESGSDVDDPCSPTGQRSSSFPRLAPVHEEARASDPNSYYS 420

Query: 417 CEDNFTLAEKSVKNDR-FRNSPKQSIRSNDVGDISCDAISNSEGSSVVHLFNMVKEKFEG 475
           C+D+F L +++   D+   ++  QS+  ND+G+ S   ISNS G  V    N VKEK E 
Sbjct: 421 CDDHFGLVDEATGYDQEVGHTQGQSL--NDMGNSSSGKISNSGGIPVNRRSNTVKEKVEN 478

Query: 476 GNIQGVARMLLSFMVRIFAIFGSLQL-IWRRQNDIHPSNLLEENTNSHLPAVEAVNEEDL 534
            N Q +ARML+SF+VR+ A   S     WRRQ++I+PSN++E+N NS   A E V +ED 
Sbjct: 479 RNFQFLARMLISFLVRLVAFIRSFPFEFWRRQSNIYPSNVMEDNQNSCSGADETVYKEDP 538

Query: 535 VVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHATVVK 594
           ++PCI+RLQ +EK +EELR+KPA IP EKEQ+L+ESL RIKSVE DLEKTK+VLHATV+K
Sbjct: 539 ILPCIQRLQSIEKKFEELRNKPAEIPFEKEQILLESLDRIKSVEFDLEKTKRVLHATVMK 598

Query: 595 QHEIAEALENLRQSKFHQRRLFC 617
           + EIAE LENLRQSKF +RRLFC
Sbjct: 599 ELEIAELLENLRQSKFRRRRLFC 621

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255581955|ref|XP_002531776.1| transporter, putative [Ricinus communis] gi|223528612|gb|EEF30632.1| transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356510235|ref|XP_003523845.1| PREDICTED: uncharacterized protein LOC100818938 [Glycine max] Back     alignment and taxonomy information
>gi|356515404|ref|XP_003526390.1| PREDICTED: uncharacterized protein LOC100783898 [Glycine max] Back     alignment and taxonomy information
>gi|224122244|ref|XP_002330575.1| predicted protein [Populus trichocarpa] gi|222872133|gb|EEF09264.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449444000|ref|XP_004139763.1| PREDICTED: uncharacterized protein LOC101217583 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449482622|ref|XP_004156352.1| PREDICTED: uncharacterized protein LOC101229964 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356560899|ref|XP_003548724.1| PREDICTED: uncharacterized protein LOC100776629 [Glycine max] Back     alignment and taxonomy information
>gi|30695991|ref|NP_849815.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] gi|30695993|ref|NP_849816.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] gi|63003750|gb|AAY25404.1| At1g55690 [Arabidopsis thaliana] gi|209414534|gb|ACI46507.1| At1g55690 [Arabidopsis thaliana] gi|332195163|gb|AEE33284.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] gi|332195165|gb|AEE33286.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30695996|ref|NP_175965.2| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] gi|332195164|gb|AEE33285.1| sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query617
TAIR|locus:2020492625 AT1G55690 "AT1G55690" [Arabido 0.995 0.982 0.614 4.7e-199
TAIR|locus:2161765577 AT5G56160 "AT5G56160" [Arabido 0.628 0.672 0.605 2.9e-146
TAIR|locus:2050019637 AT2G21520 [Arabidopsis thalian 0.651 0.631 0.570 9.9e-131
TAIR|locus:2136288614 AT4G39170 [Arabidopsis thalian 0.952 0.957 0.452 2.5e-129
TAIR|locus:2087293579 AT3G24840 [Arabidopsis thalian 0.547 0.583 0.581 4e-123
TAIR|locus:2013134608 AT1G19650 [Arabidopsis thalian 0.936 0.950 0.411 6.9e-118
TAIR|locus:2136303554 SEC14 "SECRETION 14" [Arabidop 0.549 0.611 0.545 1e-109
TAIR|locus:2018416668 AT1G75370 [Arabidopsis thalian 0.703 0.649 0.492 3e-108
TAIR|locus:2049319548 SFH3 "SEC14-like 3" [Arabidops 0.547 0.616 0.527 2.7e-107
TAIR|locus:2139564554 COW1 "CAN OF WORMS1" [Arabidop 0.581 0.648 0.508 4.5e-107
TAIR|locus:2020492 AT1G55690 "AT1G55690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1927 (683.4 bits), Expect = 4.7e-199, P = 4.7e-199
 Identities = 386/628 (61%), Positives = 482/628 (76%)

Query:     1 MSGLEILGANDEIRERRSDFENSEDERRRSRIGSLKKKAINASNKFTHSLKRRGKRKIDY 60
             MSG+E +   DE RERRSDFE SEDERRRS+IG+LKKKAINAS KFTHSLK+RGKRKIDY
Sbjct:     1 MSGVEEISTLDEFRERRSDFEISEDERRRSKIGNLKKKAINASTKFTHSLKKRGKRKIDY 60

Query:    61 RVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMW 120
             RVP+V IEDVRDE+EES VLE R+KLLERDLLPPR D+YHTLLRFLKAR+ NIE+T Q+W
Sbjct:    61 RVPAVSIEDVRDEKEESVVLEFRRKLLERDLLPPRHDEYHTLLRFLKARDLNIEKTTQLW 120

Query:   121 EEMLIWRKEYGTDTIXXXXXXXXXXXVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMR 180
             EEML WRKEYGTDTI           VLQYYPQGYHGVDKEGRPVYIE LGKAHPS+LMR
Sbjct:   121 EEMLRWRKEYGTDTILEDFDFEELEEVLQYYPQGYHGVDKEGRPVYIERLGKAHPSKLMR 180

Query:   181 ITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLA 240
             ITT+DRYLKYHVQEFERAL E+FPACS+AAKRRICSTTTILDVQGLG+K+FT TAANL+A
Sbjct:   181 ITTIDRYLKYHVQEFERALQEKFPACSIAAKRRICSTTTILDVQGLGIKNFTPTAANLVA 240

Query:   241 AVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEV 300
             A++K+DN YYPETLH+M+IVNAG GFKKMLWPAAQKFLD K+IAKIHVLEPKSL KL EV
Sbjct:   241 AMSKIDNSYYPETLHRMYIVNAGTGFKKMLWPAAQKFLDAKTIAKIHVLEPKSLFKLHEV 300

Query:   301 IDASQLPDFLGGSCTCSVEGG-CLRSNKGPWNEPEIMKLVHNAGATVVRQVSRVHDDRQK 359
             ID+SQLP+FLGGSC+C  +GG CLRSNKGPWN+PEIMKL+++  +++ RQ +R   D   
Sbjct:   301 IDSSQLPEFLGGSCSCFGDGGGCLRSNKGPWNDPEIMKLIYHGESSLFRQSTRKLTDPHY 360

Query:   360 FDSYIHIRPVKGRTSDTLTAESGSDVDDHCSTSGRRSSAPC-LAPVHEEAR--DPNAYYS 416
               SYI I P K   ++T  AES S  D   S +GR  SA   +   +EEAR  D N YYS
Sbjct:   361 SSSYISIHPSKAIQAETSAAESISCSDVPSSPTGRLCSASSHVNSAYEEARASDVNGYYS 420

Query:   417 CEDNFTLAEKSV-KNDRFRNSPKQ--SIRSNDVGDISCDAISNSEGSSVVHLFNMVKEKF 473
             C+D F + +K+  +  + R S  Q   + +  +G + C+  ++S G+ ++   + ++   
Sbjct:   421 CDDKFAIPDKATNRKGQERQSQYQMRELNATTIG-LKCE--TSSPGAPIIRWLHDLRVMI 477

Query:   474 EGGNIQGVARMLLSFMVRIFAIFGSLQL-IWRRQNDIHPSNLLEENTNSHL--PAVEAVN 530
             +    + +A+ LLS M+++ A+F    L + R Q  + PS+L E+++   L  P      
Sbjct:   478 DKIKCENLAKRLLSLMLKLAAVFRYTPLELLRSQTTVSPSSLTEDDSRCSLISPPPREPT 537

Query:   531 EEDLVVPCIERLQKLEKAYEELRHKPAAIPLEKEQMLVESLQRIKSVESDLEKTKKVLHA 590
              +D ++PC+ER+QKLEK+YE++R+KP AIP+EKE+ML++SL RIKSVE DL+KTK++LHA
Sbjct:   538 MKDRILPCLERIQKLEKSYEDIRNKPVAIPVEKERMLMDSLDRIKSVEFDLDKTKRLLHA 597

Query:   591 TVVKQHEIAEALENLRQSKFHQRR-LFC 617
             TV+KQ EI E L+N+R S+ H+RR LFC
Sbjct:   598 TVMKQMEITEMLQNIRDSQLHRRRRLFC 625
GO:0005215 "transporter activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006810 "transport" evidence=ISS
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016926 "protein desumoylation" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
TAIR|locus:2161765 AT5G56160 "AT5G56160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050019 AT2G21520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136288 AT4G39170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087293 AT3G24840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013134 AT1G19650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136303 SEC14 "SECRETION 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018416 AT1G75370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049319 SFH3 "SEC14-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139564 COW1 "CAN OF WORMS1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033443001
SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (670 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
smart00516158 smart00516, SEC14, Domain in homologues of a S 1e-38
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 1e-34
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 1e-30
pfam13716149 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain 1e-11
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 2e-11
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 1e-08
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information 
 Score =  139 bits (352), Expect = 1e-38
 Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 15/173 (8%)

Query: 143 ELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLER 202
           ELE +  Y P G  G DK+GRPV IE  G+      ++  T++  L+Y V   E+ L E 
Sbjct: 1   ELELLKAYIPGGR-GYDKDGRPVLIERAGRFD----LKSVTLEELLRYLVYVLEKILQEE 55

Query: 203 FPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNA 262
                      I   T I D++GL M +      ++L  + K+   +YPE L +++I+N 
Sbjct: 56  KK------TGGIEGFTVIFDLKGLSMSNPD---LSVLRKILKILQDHYPERLGKVYIINP 106

Query: 263 GPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCT 315
            P F ++LW   + FLD K+  KI  +   S  +LLE ID  QLP+ LGG+  
Sbjct: 107 -PWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELLEYIDKEQLPEELGGTLD 158

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 617
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.96
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.95
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.92
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.36
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.64
KOG4406467 consensus CDC42 Rho GTPase-activating protein [Sig 98.0
COG406475 MtrG Tetrahydromethanopterin S-methyltransferase, 87.1
TIGR0114970 mtrG N5-methyltetrahydromethanopterin:coenzyme M m 85.03
PRK0102677 tetrahydromethanopterin S-methyltransferase subuni 84.28
PF0421070 MtrG: Tetrahydromethanopterin S-methyltransferase, 82.09
>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.7e-45  Score=384.39  Aligned_cols=278  Identities=43%  Similarity=0.726  Sum_probs=247.0

Q ss_pred             cCCCcccccCCC--HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCcccc
Q 007116           61 RVPSVPIEDVRD--EREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILED  138 (617)
Q Consensus        61 ~~~~~~~edl~d--~~e~~aL~eLR~~L~~~~~Lp~~~dD~~~LLRFLrArkfDvekA~~~L~~~l~WRk~~~~d~i~~d  138 (617)
                      .++.++.+++.+  +.+.+.++++| |+..+++++..++|+.+||||||||+||+++|++||.+++.||+.+..+.+..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~i~~lr-~~~~~~~l~~~~~~d~~LlRfLra~~f~ve~a~~~l~~~l~~r~~~~~d~i~~~   84 (317)
T KOG1471|consen    6 MLAKVAKEELNEITESEEAVIAQLR-WLLQKPHLPNKYDDDFNLLRFLRARKFDVEKAKQMLKRYLNWRKRNKLDEIFED   84 (317)
T ss_pred             ccccccccccCCCcHHHHHHHHHHH-HHhhccCCCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCCccHhhc
Confidence            445555666665  44677777777 999999999755555799999999999999999999999999999999998876


Q ss_pred             hhhHHHHHHHhhcccccccCCCCCCcEEEEecCCCCcccccccccHHHHHHHHHHHHHHHHHhhcccchhhhcCCcCcEE
Q 007116          139 FEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTT  218 (617)
Q Consensus       139 ~~~~el~~v~~~~p~~~~G~Dk~GRpV~i~rlg~~Dp~kl~~~~t~~~~ir~~v~~lE~~l~~~~p~cs~~~~~~i~g~t  218 (617)
                        ......+.+++|.+++|.|++|+||++.+.|..|+..++..+...++.++++..+|..+..+++.|....+++++|++
T Consensus        85 --~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~  162 (317)
T KOG1471|consen   85 --FEEDDELLKYYPQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIV  162 (317)
T ss_pred             --cccchhhhhhccccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeE
Confidence              233344566889999999999999999999999999999999999999999999999999888888887788999999


Q ss_pred             EEEeCCCCCcCCcchHHHHHHHHHHHhcccccccccceEEEEeCChhHHHHHHHHHhhcCChhhhceeEEcCCCchhHHH
Q 007116          219 TILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLL  298 (617)
Q Consensus       219 vIiDl~G~sl~~~~~~~~~llk~i~kilq~~YPerL~~i~IINaP~~f~~~lw~lvKpFL~~ktr~KI~~~~~~~~~~L~  298 (617)
                      +|+|++|+++.|+....+..++.++.+++++||++++++||||+|++| .++|++|||||+++|++||+++++++.++|+
T Consensus       163 ~I~Dl~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f-~~~~~~ikpfL~~kt~~ki~~~~~~~~~~L~  241 (317)
T KOG1471|consen  163 TIFDLKGVSLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIF-SALWKVVKPFLDEKTRKKIHVLHSKDKESLL  241 (317)
T ss_pred             EEEECCCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhH-HHHHHHHhccCCHHHHhhheecCCCchhhhh
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999966556799999


Q ss_pred             ccCCCCCCCccCCCCCCCCC---CCCcccCCCCCCCcHHHHHHHhhh
Q 007116          299 EVIDASQLPDFLGGSCTCSV---EGGCLRSNKGPWNEPEIMKLVHNA  342 (617)
Q Consensus       299 e~Id~s~LP~eyGGt~~~~~---~~gcl~~~~gpw~dp~i~~~v~~~  342 (617)
                      ++|+++.||++|||++++.+   .++|..++.+||.++.+.+.....
T Consensus       242 k~i~~~~LP~~yGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (317)
T KOG1471|consen  242 KYIPPEVLPEEYGGTCGDLDDPNGGGCDLSDEGPWKEPEIKKGKQEI  288 (317)
T ss_pred             hhCCHhhCccccCCCccccccccCCcCcccccccccccccccccccc
Confidence            99999999999999999964   467999999999998765544333

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>COG4064 MtrG Tetrahydromethanopterin S-methyltransferase, subunit G [Coenzyme metabolism] Back     alignment and domain information
>TIGR01149 mtrG N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G Back     alignment and domain information
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional Back     alignment and domain information
>PF04210 MtrG: Tetrahydromethanopterin S-methyltransferase, subunit G ; InterPro: IPR005866 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit G in methanogenic archaea Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 6e-41
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 2e-35
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 7e-35
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 3e-17
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 3e-17
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 5e-16
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score =  165 bits (418), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 149/266 (56%), Gaps = 5/266 (1%)
Query: 72  DEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYG 131
           D  +E A+ ELR KLLE      R DD  TLLRFL+AR+F+++   +M+E    WRK+YG
Sbjct: 27  DSAQEKALAELR-KLLEDAGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYG 84
Query: 132 TDTIXXXXXXXXXXXVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYH 191
           TDTI           + ++YPQ YH  DK+GRPVY E LG  +   + ++T+ +R LK  
Sbjct: 85  TDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL 144
Query: 192 VQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYP 251
           V E+E  +  R PACS AA   + ++ TI+D++G+ +     +  + +   + +   YYP
Sbjct: 145 VWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISS-AYSVMSYVREASYISQNYYP 203
Query: 252 ETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLG 311
           E + + +I+NA  GF    +   + FLDP +++KI +L      +LL+ I A  LP   G
Sbjct: 204 ERMGKFYIINAPFGFSTA-FRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFG 262
Query: 312 GSCTCS-VEGGCLRSNKGPWNEPEIM 336
           G       +GG   S+ GPW +P+ +
Sbjct: 263 GKSEVDESKGGLYLSDIGPWRDPKYI 288
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query617
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 1e-104
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 1e-100
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 2e-87
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 7e-78
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 3e-63
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
 Score =  317 bits (813), Expect = e-104
 Identities = 98/268 (36%), Positives = 155/268 (57%), Gaps = 5/268 (1%)

Query: 72  DEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYG 131
           D  +E A+ ELR+ L +      R DD  TLLRFL+AR+F+++   +M+E    WRK+YG
Sbjct: 27  DSAQEKALAELRKLLED-AGFIERLDD-STLLRFLRARKFDVQLAKEMFENCEKWRKDYG 84

Query: 132 TDTILEDFEFEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYH 191
           TDTIL+DF ++E   + ++YPQ YH  DK+GRPVY E LG  +   + ++T+ +R LK  
Sbjct: 85  TDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNL 144

Query: 192 VQEFERALLERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYP 251
           V E+E  +  R PACS AA   + ++ TI+D++G+ +     +  + +   + +   YYP
Sbjct: 145 VWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSA-YSVMSYVREASYISQNYYP 203

Query: 252 ETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLG 311
           E + + +I+NA  GF    +   + FLDP +++KI +L      +LL+ I A  LP   G
Sbjct: 204 ERMGKFYIINAPFGF-STAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFG 262

Query: 312 GSCTCSV-EGGCLRSNKGPWNEPEIMKL 338
           G       +GG   S+ GPW +P+ +  
Sbjct: 263 GKSEVDESKGGLYLSDIGPWRDPKYIGP 290
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query617
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 99.07
3peg_A290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.8
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
Probab=100.00  E-value=9.7e-55  Score=457.89  Aligned_cols=273  Identities=34%  Similarity=0.613  Sum_probs=246.1

Q ss_pred             ccCCCcccccCCCHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCCcccch
Q 007116           60 YRVPSVPIEDVRDEREESAVLELRQKLLERDLLPPRQDDYHTLLRFLKAREFNIERTIQMWEEMLIWRKEYGTDTILEDF  139 (617)
Q Consensus        60 ~~~~~~~~edl~d~~e~~aL~eLR~~L~~~~~Lp~~~dD~~~LLRFLrArkfDvekA~~~L~~~l~WRk~~~~d~i~~d~  139 (617)
                      ...++....++ +++|+++|++||+||.++++ +...|| .+||||||||+||+++|.+||++|++||++++++.+..++
T Consensus        25 ~~~~~g~~~~l-t~~q~~~l~~lR~~l~~~~~-~~~~dD-~~LLRFLRArkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~  101 (320)
T 3q8g_A           25 PNALPGTPGNL-TKEQEEALLQFRSILLEKNY-KERLDD-STLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDY  101 (320)
T ss_dssp             TTSCTTSTTCC-CHHHHHHHHHHHHHHHHTTC-CSSCSH-HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHH
T ss_pred             CCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCC-CCCCCH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCcccccccc
Confidence            34556667777 58889999999999999884 455555 6999999999999999999999999999999998888765


Q ss_pred             hhH------HHHHHHhhcccccccCCCCCCcEEEEecCCCCcccccccccHHHHHHHHHHHHHHHHHhhcccchhhhcCC
Q 007116          140 EFE------ELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRR  213 (617)
Q Consensus       140 ~~~------el~~v~~~~p~~~~G~Dk~GRpV~i~rlg~~Dp~kl~~~~t~~~~ir~~v~~lE~~l~~~~p~cs~~~~~~  213 (617)
                      .+.      +...+.++++++++|+|++||||+|+++|++|+.++++.++.+++++++++.+|.+++..++.|+...+..
T Consensus       102 ~~~~~~~~~e~~~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~  181 (320)
T 3q8g_A          102 ENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYL  181 (320)
T ss_dssp             HHTHHHHHHHHHHHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSC
T ss_pred             ccccccchhHHHHHHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCC
Confidence            544      44457788999999999999999999999999999877788999999999999999987778888777778


Q ss_pred             cCcEEEEEeCCCCCcCCcchHHHHHHHHHHHhcccccccccceEEEEeCChhHHHHHHHHHhhcCChhhhceeEEcCCCc
Q 007116          214 ICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKS  293 (617)
Q Consensus       214 i~g~tvIiDl~G~sl~~~~~~~~~llk~i~kilq~~YPerL~~i~IINaP~~f~~~lw~lvKpFL~~ktr~KI~~~~~~~  293 (617)
                      ++++++|+|++|+++++++.. +.+++.+++++|++||+||+++||||+|++| .++|++++|||+++|++||+|+++++
T Consensus       182 ve~~~~IiD~~g~sl~~~~~~-~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f-~~~~~~ikpfl~~~t~~KI~~~~~~~  259 (320)
T 3q8g_A          182 IETSCTVLDLKGISLSNAYHV-LSYIKDVADISQNYYPERMGKFYIIHSPFGF-STMFKMVKPFLDPVTVSKIFILGSSY  259 (320)
T ss_dssp             CCCEEEEEECTTCCHHHHHHT-HHHHHHHHHHHHHHSTTCEEEEEEESCCTTH-HHHHTTTGGGSCHHHHHTEEECCTTH
T ss_pred             cceeEEEEECCCCCHHHHHHH-HHHHHHHHHHHHhhCchhhceEEEECCCHHH-HHHHHHHHHhCCHHHhhhEEEeCCCc
Confidence            999999999999999998753 7889999999999999999999999999999 99999999999999999999999877


Q ss_pred             hhHHHccCCCCCCCccCCCCCCCCC-CCCcccCCCCCCCcHHHHH
Q 007116          294 LGKLLEVIDASQLPDFLGGSCTCSV-EGGCLRSNKGPWNEPEIMK  337 (617)
Q Consensus       294 ~~~L~e~Id~s~LP~eyGGt~~~~~-~~gcl~~~~gpw~dp~i~~  337 (617)
                      .+.|.++||+++||++|||+++|.+ +|||+.+|.|||+||++.+
T Consensus       260 ~~~L~~~i~~~~LP~~yGG~~~~~~~~ggc~~~~~gpw~~~~~~~  304 (320)
T 3q8g_A          260 KKELLKQIPIENLPVKYGGTSVLHNPNDKFYYSDIGPWRDPRYIG  304 (320)
T ss_dssp             HHHHHHHSCGGGSBGGGTSCBCCSSTTSCGGGBCBSGGGCTTTCC
T ss_pred             HHHHHhhCChhhCChhhCCCCCCCCCCCCeecCCCCCCCChhhcC
Confidence            8899999999999999999999987 6999999999999997754
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 617
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 5e-61
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 4e-47
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 7e-26
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 1e-19
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 2e-18
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 5e-12
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  199 bits (507), Expect = 5e-61
 Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 3/198 (1%)

Query: 141 FEELEEVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALL 200
           ++E   + ++YPQ YH  DK+GRPVY E LG  +   + ++T+ +R LK  V E+E  + 
Sbjct: 1   YDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQ 60

Query: 201 ERFPACSVAAKRRICSTTTILDVQGLGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIV 260
            R PACS AA   + ++ TI+D++G+ +     +  + +   + +   YYPE + + +I+
Sbjct: 61  YRLPACSRAAGHLVETSCTIMDLKGISISSA-YSVMSYVREASYISQNYYPERMGKFYII 119

Query: 261 NAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQLPDFLGGSCTCSV-E 319
           NA  GF    +   + FLDP +++KI +L      +LL+ I A  LP   GG       +
Sbjct: 120 NAPFGFSTA-FRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESK 178

Query: 320 GGCLRSNKGPWNEPEIMK 337
           GG   S+ GPW +P+ + 
Sbjct: 179 GGLYLSDIGPWRDPKYIG 196
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query617
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 100.0
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 100.0
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.52
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.38
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 99.32
d1uk5a_111 BAG-family molecular chaperone regulator-3 {Mouse 84.19
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-38  Score=309.60  Aligned_cols=188  Identities=34%  Similarity=0.629  Sum_probs=175.0

Q ss_pred             HHHhhcccccccCCCCCCcEEEEecCCCCcccccccccHHHHHHHHHHHHHHHHHhhcccchhhhcCCcCcEEEEEeCCC
Q 007116          146 EVLQYYPQGYHGVDKEGRPVYIELLGKAHPSRLMRITTVDRYLKYHVQEFERALLERFPACSVAAKRRICSTTTILDVQG  225 (617)
Q Consensus       146 ~v~~~~p~~~~G~Dk~GRpV~i~rlg~~Dp~kl~~~~t~~~~ir~~v~~lE~~l~~~~p~cs~~~~~~i~g~tvIiDl~G  225 (617)
                      .+.+|||+++||+|++||||+|+++|++|+.++++..+.+++++++++.+|.+++..++.++.....+++++++|+|++|
T Consensus         6 ~~~~~~p~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g   85 (203)
T d1auaa2           6 LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKG   85 (203)
T ss_dssp             HHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTT
T ss_pred             HHHHHCCCcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCC
Confidence            36789999999999999999999999999999988889999999999999999987766666666778999999999999


Q ss_pred             CCcCCcchHHHHHHHHHHHhcccccccccceEEEEeCChhHHHHHHHHHhhcCChhhhceeEEcCCCchhHHHccCCCCC
Q 007116          226 LGMKHFTRTAANLLAAVAKVDNCYYPETLHQMFIVNAGPGFKKMLWPAAQKFLDPKSIAKIHVLEPKSLGKLLEVIDASQ  305 (617)
Q Consensus       226 ~sl~~~~~~~~~llk~i~kilq~~YPerL~~i~IINaP~~f~~~lw~lvKpFL~~ktr~KI~~~~~~~~~~L~e~Id~s~  305 (617)
                      ++++++.. ...+++.++++++++||++++++||||+|++| +++|+++++||+++|++||+|+++++.+.|.++||+++
T Consensus        86 ~s~~~~~~-~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~-~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~  163 (203)
T d1auaa2          86 ISISSAYS-VMSYVREASYISQNYYPERMGKFYIINAPFGF-STAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAEN  163 (203)
T ss_dssp             CCHHHHHH-HHHHHHHHHHHHHHHSTTCEEEEEEESCCHHH-HHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSS
T ss_pred             CChHHhhh-HHHHHHHHHHHHHHhChHhhcceEEECCcHHH-HHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhh
Confidence            99999864 46788999999999999999999999999999 99999999999999999999999888899999999999


Q ss_pred             CCccCCCCCCCCCC-CCcccCCCCCCCcHHH
Q 007116          306 LPDFLGGSCTCSVE-GGCLRSNKGPWNEPEI  335 (617)
Q Consensus       306 LP~eyGGt~~~~~~-~gcl~~~~gpw~dp~i  335 (617)
                      ||.+|||+|.|.+. |+|+..+.|||+||++
T Consensus       164 LP~~~GG~~~~~~~~g~~~~~~~~~~~~p~~  194 (203)
T d1auaa2         164 LPVKFGGKSEVDESKGGLYLSDIGPWRDPKY  194 (203)
T ss_dssp             SBGGGTSCBCCCGGGCCSTTCCCSGGGCGGG
T ss_pred             ChHHhCCCCcCCCCCCCccccCCCCCCChhh
Confidence            99999999999754 9999999999999965
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure